R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|100163|pir||S16321 light-induced protein CPRF-2 - parsley
Length = 393
Frame 1 hits (HSPs): _____________________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | 393
0 150 300
__________________
Annotated Domains:
Entrez domain: fos/jun DNA-binding domain homol 185..225
PROSITE BZIP_BASIC: bZIP transcription factors b 195..210
__________________
Plus Strand HSPs:
Score = 241 (84.8 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 64/161 (39%), Positives = 96/161 (59%), Frame = +1
Query: 1 RSESEWAFQQFLQEAAASSSSN---SDHHHLKFKNEFNINIPVTTTSIQNINVDSQDYHA 171
RS+SEWAFQ FLQ+A+A SS SD + + + IP N+ VDS+DY A
Sbjct: 22 RSDSEWAFQSFLQQASALESSQPLPSDPVPVAGDVKNPVEIPA------NVPVDSEDYQA 75
Query: 172 ILKTKLNLACAAVAMTRGSLVKSQNPATFSDSGPQASNSSEDGLQATLKGSGPSGNDPSK 351
LK++L+LACAAVA+TR S +K Q+ A D+G QASN+S+ Q KGSG +D SK
Sbjct: 76 YLKSRLDLACAAVALTRASSLKPQDSAALLDNGSQASNTSQLVSQVPPKGSG---HDLSK 132
Query: 352 LQNKDVKAQIGIPSSIFHAKQTCCRNEANDKWIIQENNPDDEEV 483
++K+ A P K++ + ++ ++++ DD+E+
Sbjct: 133 EEDKEALAATATPLLPALQKKSAIQVKSTTSGSSRDHSDDDDEL 176
>gi|2842757|sp|Q99090|CPR2_PETCR LIGHT-INDUCIBLE PROTEIN CPRF-2
>gi|1806261|emb|CAA41453.1| (X58577) DNA-binding protein; bZIP type
[Petroselinum crispum]
Length = 401
Frame 1 hits (HSPs): ____________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | 401
0 150 300
__________________
Annotated Domains:
BLOCKS BL00036: bZIP transcription factors basi 207..219
Entrez Domain: ASP/GLU-RICH (ACIDIC). 176..189
Entrez dna-binding site: BASIC MOTIF. 200..219
Entrez Domain: LEUCINE-ZIPPER. 226..261
PFAM bZIP: bZIP transcription factor 196..260
PRODOM PD092077: CPR2_PETCR 1..29
PRODOM PD005281: 31..195
PRODOM PD000088: AP1(10) FOS(9) CREB(5) 198..269
PRODOM PD008169: 271..392
PROSITE BZIP_BASIC: bZIP transcription factors b 203..218
__________________
Plus Strand HSPs:
Score = 241 (84.8 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 64/161 (39%), Positives = 96/161 (59%), Frame = +1
Query: 1 RSESEWAFQQFLQEAAASSSSN---SDHHHLKFKNEFNINIPVTTTSIQNINVDSQDYHA 171
RS+SEWAFQ FLQ+A+A SS SD + + + IP N+ VDS+DY A
Sbjct: 30 RSDSEWAFQSFLQQASALESSQPLPSDPVPVAGDVKNPVEIPA------NVPVDSEDYQA 83
Query: 172 ILKTKLNLACAAVAMTRGSLVKSQNPATFSDSGPQASNSSEDGLQATLKGSGPSGNDPSK 351
LK++L+LACAAVA+TR S +K Q+ A D+G QASN+S+ Q KGSG +D SK
Sbjct: 84 YLKSRLDLACAAVALTRASSLKPQDSAALLDNGSQASNTSQLVSQVPPKGSG---HDLSK 140
Query: 352 LQNKDVKAQIGIPSSIFHAKQTCCRNEANDKWIIQENNPDDEEV 483
++K+ A P K++ + ++ ++++ DD+E+
Sbjct: 141 EEDKEALAATATPLLPALQKKSAIQVKSTTSGSSRDHSDDDDEL 184
>gi|10954099|gb|AAG25729.1|AF310224_1 (AF310224) bZIP protein BZO2H3
[Arabidopsis thaliana]
Length = 191
Frame 1 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | 191
0 50 100 150
Plus Strand HSPs:
Score = 186 (65.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 45/108 (41%), Positives = 65/108 (60%), Frame = +1
Query: 1 RSESEWAFQQFLQEAAASSSSNSDHHHLKFKNEFNINIPVTTTSIQNINVDSQDYHAILK 180
RS SEWAF +F+QE++A++ E V+ +S N+ VDS++Y A LK
Sbjct: 26 RSASEWAFNRFIQESSAAADDG----------ESTTACGVSVSSPPNVPVDSEEYRAFLK 75
Query: 181 TKLNLACAAVAMTRGSLVKSQNPATFSDSGPQASNSSEDGLQATLKGS 324
+KLNLACAAVAM RG+ +K Q+ + SD+G +N SE A+ K +
Sbjct: 76 SKLNLACAAVAMKRGTFIKPQDTSGRSDNG--GANESEQASLASSKAT 121
>gi|7682779|gb|AAF67360.1| (AF262041) Hypothetical protein T32B20.c
[Arabidopsis thaliana]
Length = 311
Frame 1 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | | | | 311
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 186 (65.5 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 45/108 (41%), Positives = 65/108 (60%), Frame = +1
Query: 1 RSESEWAFQQFLQEAAASSSSNSDHHHLKFKNEFNINIPVTTTSIQNINVDSQDYHAILK 180
RS SEWAF +F+QE++A++ E V+ +S N+ VDS++Y A LK
Sbjct: 26 RSASEWAFNRFIQESSAAADDG----------ESTTACGVSVSSPPNVPVDSEEYRAFLK 75
Query: 181 TKLNLACAAVAMTRGSLVKSQNPATFSDSGPQASNSSEDGLQATLKGS 324
+KLNLACAAVAM RG+ +K Q+ + SD+G +N SE A+ K +
Sbjct: 76 SKLNLACAAVAMKRGTFIKPQDTSGRSDNG--GANESEQASLASSKAT 121
>gi|7488648|pir||T07154 bZIP DNA-binding protein HBF-1 - soybean
>gi|1905785|emb|CAA71687.1| (Y10685) G/HBF-1 [Glycine max]
Length = 378
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | 378
0 150 300
Plus Strand HSPs:
Score = 182 (64.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 53/159 (33%), Positives = 90/159 (56%), Frame = +1
Query: 46 AASSSSNSDHHHLKFKNEFNINIPVT--TTSIQ-------------NINVDSQDYHAILK 180
A+SSSS+ + ++ K+E N++IP +T++ NI VDS++Y A LK
Sbjct: 3 ASSSSSSHQNDVVEIKDE-NLSIPNLNPSTALNSKPASSFGLAPPPNIAVDSEEYQAFLK 61
Query: 181 TKLNLACAAVAMTRGSLVKSQNP-ATFSDSGPQASNSSEDGLQATLKGSGPSGNDPSKLQ 357
++L+LACAAVA+TRG + Q+ +T D G + +++++ G + GSG + +K+Q
Sbjct: 62 SQLHLACAAVALTRGKSLNPQDSGSTAHDKGSETASAAQSGSHVSTLGSG---QEVAKIQ 118
Query: 358 NKDVKAQIGIPSSIFHAKQTCCRNEANDKWIIQENNPDDEEVG 486
+KD +GIPS K+ + + +E + DDE G
Sbjct: 119 DKDAGGPVGIPSLPPVQKKPVVQVRSTTSGSSREQSDDDEAEG 161
>gi|11281306|pir||T47621 bZIP transcription factor-like protein - Arabidopsis
thaliana >gi|7258365|emb|CAB77582.1| (AL138656) bZIP transcription
factor-like protein [Arabidopsis thaliana]
Length = 403
Frame 2 hits (HSPs): ___
Frame 1 hits (HSPs): ___ _________
__________________________________________________
Database sequence: | | | | 403
0 150 300
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 27/68 (39%), Positives = 40/68 (58%), Frame = +1
Query: 85 KFKNEFNINIPVTTTSIQNINVDSQDYHAILKTKLNLACAAVAMTRGSLVKSQNPATFSD 264
K +N + PV +++ + VD YHAILK+KL LACAAVA G+ VK ++ + +
Sbjct: 110 KNRNRAPSSDPVDSSA--PVVVDPNQYHAILKSKLELACAAVARRVGT-VKPEDSSASAS 166
Query: 265 SGPQASNS 288
+ QA S
Sbjct: 167 NQKQAQGS 174
Score = 61 (21.5 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 11/21 (52%), Positives = 15/21 (71%), Frame = +1
Query: 1 RSESEWAFQQFLQEAAASSSS 63
RS+SEWAF + + E + S SS
Sbjct: 42 RSQSEWAFHRLINELSGSDSS 62
Score = 44 (15.5 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 13/24 (54%), Positives = 14/24 (58%), Frame = +2
Query: 386 FLPPSSMQNKPAVAMRPTISGSSR 457
F P +S Q KP V R T S SSR
Sbjct: 188 FSPTTSTQKKPDVPARQT-SISSR 210
>gi|7489367|pir||T04477 blz-1 protein - barley >gi|1869928|emb|CAA56374.1|
(X80068) blz-1 protein [Hordeum vulgare]
Length = 391
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | 391
0 150 300
Plus Strand HSPs:
Score = 101 (35.6 bits), Expect = 0.056, P = 0.055
Identities = 48/162 (29%), Positives = 70/162 (43%), Frame = +1
Query: 1 RSESEWAFQQFLQEAAASS--SSNSDHHHLKFKNEFNINIPVTTTSIQNINVDSQDYHAI 174
R SEW FQ+FL+EA S + S + + + VD +Y+A+
Sbjct: 34 RCPSEWYFQKFLEEAVLDSPAADPSPMSGASGRGQAACRPRGVAGTATGPAVDPVEYNAM 93
Query: 175 LKTKLNLACAAVAMTRGSLVKSQNPATFSDSGPQASNSSEDGLQATLKGSGPSGNDPSKL 354
LK KL AAVAM R S + P F+ S P N+ DG + P G + L
Sbjct: 94 LKQKLEKDLAAVAMWRAS--GAMPPERFAAS-PSCPNA--DGQH--IGTINPIGGNVVPL 146
Query: 355 QNKDVKAQIGI--PSSIFHAKQTCCRNEANDKWIIQENNPDDEEVG 486
QNK G+ P + +A + A+ +E + DD+ G
Sbjct: 147 QNKLAGGASGVSGPHLVQNA-DALVKQAASSS--SREQSEDDDMEG 189
>gi|2130145|pir||JC5175 seed storage protein opaque-2 - maize
>gi|1144536|gb|AAC49533.1| (U35063) opaque-2 heterodimerizing
protein 1b [Zea mays]
Length = 405
Frame 1 hits (HSPs): ____________________
Annotated Domains: ___
__________________________________________________
Database sequence: | | | | 405
0 150 300
__________________
Annotated Domains:
PROSITE BZIP_BASIC: bZIP transcription factors b 217..232
PROSITE BZIP_BASIC: bZIP transcription factors b 219..232
__________________
Plus Strand HSPs:
Score = 99 (34.8 bits), Expect = 0.10, P = 0.096
Identities = 45/148 (30%), Positives = 64/148 (43%), Frame = +1
Query: 1 RSESEWAFQQFLQEAA-------ASSSSNSDHHHLKFKNEFNINIPVTTTSIQNINVDSQ 159
R SEW FQ+FL+EA A +S S ++ + ++ VD
Sbjct: 41 RCPSEWYFQKFLEEAVLDSPVPVAGASRGSVGAGVEAAESKTPGAAARAAASSSV-VDPV 99
Query: 160 DYHAILKTKLNLACAAVAMTR--GSLVKSQNPATFS----D---SGPQASNSSEDGL-QA 309
+Y+A+LK KL AAVA+ R G+ +PA S D +GP L Q
Sbjct: 100 EYNAMLKQKLEKDLAAVALWRASGAAPPDHSPAGSSLPSVDVPHAGPLKPIGGTGSLVQN 159
Query: 310 TLKGSGPSGNDPSKLQNKDVKAQIGIPSS 396
L G+ G+ P LQN D+ + SS
Sbjct: 160 KLLGAPGGGSSPHVLQNADIPVKQTTSSS 188
>gi|4115746|dbj|BAA36492.1| (AB021736) bZIP protein [Oryza sativa]
Length = 421
Frame 1 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | 421
0 150 300
Plus Strand HSPs:
Score = 99 (34.8 bits), Expect = 0.11, P = 0.10
Identities = 46/141 (32%), Positives = 67/141 (47%), Frame = +1
Query: 1 RSESEWAFQQFLQEAAASS-----SSNSDHHHLKFKN---EFNINIP-VTTTSIQNINVD 153
R SEW FQ+FL+EA S S ++ ++ ++ P ++ + + VD
Sbjct: 55 RCPSEWYFQKFLEEAVLDSPVPNPSPRAEAGGIRGAGGVVPVDVKQPQLSAAATTSAVVD 114
Query: 154 SQDYHAILKTKLNLACAAVAMTRGS-LVKSQNP--------ATFSDSG-PQASNSSEDGL 303
+Y+A+LK KL AAVAM + S V + P A S G P + + +
Sbjct: 115 PVEYNAMLKQKLEKDLAAVAMWKASGTVPPERPGAGSSLLNADVSHIGAPISIGGNATPV 174
Query: 304 QATLKGSGPSGNDPSKL-QNKDV 369
Q L SGPSG S+L QN DV
Sbjct: 175 QNML--SGPSGGSGSQLVQNVDV 195
>gi|542187|pir||JQ2147 OHP1 protein - maize >gi|168530|gb|AAA33488.1| (L00623)
opaque2 heterodimerizing protein 1 [Zea mays]
Length = 405
Frame 1 hits (HSPs): ____________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | 405
0 150 300
__________________
Annotated Domains:
DOMO DM02719: 20..405
Entrez domain: fos/jun DNA-binding domain homol 207..247
Entrez region: leucine zipper motif 233..292
PROSITE BZIP_BASIC: bZIP transcription factors b 217..232
PROSITE BZIP_BASIC: bZIP transcription factors b 219..232
__________________
Plus Strand HSPs:
Score = 97 (34.1 bits), Expect = 0.18, P = 0.16
Identities = 44/148 (29%), Positives = 63/148 (42%), Frame = +1
Query: 1 RSESEWAFQQFLQEAAASS-------SSNSDHHHLKFKNEFNINIPVTTTSIQNINVDSQ 159
R SEW FQ+FL+EA S S S ++ + ++ VD
Sbjct: 41 RCPSEWYFQKFLEEAVLDSPVPVAGVSRGSVGAGVEAAERKTPGTAAAAAASSSV-VDPV 99
Query: 160 DYHAILKTKLNLACAAVAMTR--GSLVKSQNPATFS----D---SGPQASNSSEDGL-QA 309
+Y+AI+K KL AAVA+ R G+ +PA S D +GP L Q
Sbjct: 100 EYNAIVKQKLEKDLAAVALWRASGAAPPDNSPAGSSLPSVDVPHAGPLKPMGGTGSLVQN 159
Query: 310 TLKGSGPSGNDPSKLQNKDVKAQIGIPSS 396
L G+ G+ P +QN D+ + SS
Sbjct: 160 KLAGAPGGGSSPHVVQNADIPVKQTTSSS 188
>gi|7489532|pir||T03605 probable DNA binding protein - rice
>gi|1783305|dbj|BAA11431.1| (D78609) bZIP protein [Oryza sativa]
Length = 425
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | 425
0 150 300
Plus Strand HSPs:
Score = 94 (33.1 bits), Expect = 0.43, P = 0.35
Identities = 49/154 (31%), Positives = 68/154 (44%), Frame = +1
Query: 1 RSESEWAFQQFLQEAAASS-----SSNSDHHHLKFKN---EFNINIP-----VTTTSIQN 141
R SEW FQ+FL+EA S S ++ ++ ++ P + +
Sbjct: 55 RCPSEWYFQKFLEEAVLDSPVPNPSPRAEAGGIRGAGGVVPVDVKQPQLSAAAAAAATTS 114
Query: 142 INVDSQDYHAILKTKLNLACAAVAMTRGS-LVKSQNP--------ATFSDSG-PQASNSS 291
VD +Y+A+LK KL AAVAM R S V + P A S G P + +
Sbjct: 115 AVVDPVEYNAMLKQKLEKDLAAVAMWRASGTVPPERPGAGSSLLNADVSHIGAPISIGGN 174
Query: 292 EDGLQATLKGSGPSGNDPSKL-QNKDVKAQIGIPSS 396
+Q L SGPSG S+L QN DV + SS
Sbjct: 175 ATPVQNML--SGPSGGSGSQLVQNVDVLVKQATSSS 208
>gi|542114|pir||S42493 opaque 2 protein - Job's tears
>gi|463212|emb|CAA55092.1| (X78287) opaque 2 [Coix lacryma-jobi]
Length = 408
Frame 1 hits (HSPs): _________________
Annotated Domains: ____________________________________________
__________________________________________________
Database sequence: | | | | 408
0 150 300
__________________
Annotated Domains:
DOMO DM02719: 38..389
Entrez domain: fos/jun DNA-binding domain homol 209..249
PROSITE BZIP_BASIC: bZIP transcription factors b 219..234
PROSITE BZIP_BASIC: bZIP transcription factors b 221..234
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 242..263
__________________
Plus Strand HSPs:
Score = 92 (32.4 bits), Expect = 0.70, P = 0.50
Identities = 35/132 (26%), Positives = 58/132 (43%), Frame = +1
Query: 1 RSESEWAFQQFLQEAAASSSS----NSDHHHLKFKNEFNINIPVTTTSIQNINVDSQDYH 168
++ +EW F++ L+E + + NS L ++ + + D +Y+
Sbjct: 60 QNTTEWTFERLLEEEILINKTTLVTNSSCSTLNIDPVVEVDQGTMASGAVSAVGDPMEYN 119
Query: 169 AILKTKLNLACAAVAMTRGSLVKSQNPATFSDSGPQASNSSEDGLQATLKGSGPSGNDPS 348
AILK KL + A M R S V N DS + S++ +Q L G P N
Sbjct: 120 AILKRKLEVDLVAFKMWRASSVV--NSERSQDSNNH-NGGSKNVVQNKLNGEDPINNHA- 175
Query: 349 KLQNKDVKAQIGIPSS 396
QN D++ ++ SS
Sbjct: 176 --QNVDLRVRLATSSS 189
>gi|542188|pir||JQ2148 OHP2 protein - maize >gi|168428|gb|AAA33439.1| (L06478)
opaque2 heterodimerizing protein 2 [Zea mays]
Length = 410
Frame 1 hits (HSPs): ___________________
Annotated Domains: __________
__________________________________________________
Database sequence: | | | | 410
0 150 300
__________________
Annotated Domains:
Entrez domain: fos/jun DNA-binding domain homol 212..252
Entrez region: leucine zipper motif 239..287
PROSITE BZIP_BASIC: bZIP transcription factors b 222..237
PROSITE BZIP_BASIC: bZIP transcription factors b 224..237
__________________
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 1.6, P = 0.79
Identities = 41/148 (27%), Positives = 63/148 (42%), Frame = +1
Query: 1 RSESEWAFQQFLQEAAASSSS-------NSDHHHLKFKNEFNINIPVTTTSIQNINVDSQ 159
R SEW F++FL+EA S +S ++ + S+ + VD
Sbjct: 46 RCPSEWYFEKFLEEAVLDSPGPVAGVGRSSGQAGVEAAESKPLGA-AAPASVSSSVVDPV 104
Query: 160 DYHAILKTKLNLACAAVAMTRGSLVK----SQNPATFSDSG-PQAS-----NSSEDGLQA 309
+Y+A+LK KL AA+AM R S S A+ G P A+ +E +Q
Sbjct: 105 EYNAMLKQKLEKDLAAIAMWRASGAAPPDLSATAASLPSVGVPHAAPLKPVGGTESLVQN 164
Query: 310 TLKGSGPSGNDPSKLQNKDVKAQIGIPSS 396
L G+ G+ P +Q D+ + SS
Sbjct: 165 MLAGAPVGGSGPHIVQIADIPVKQTTSSS 193
>gi|7487942|pir||T01085 light-induced protein CPRF-2 homolog T10P11.9 -
Arabidopsis thaliana >gi|3892047|gb|AAC78255.1|AAC78255 (AC002330)
putative bZIP-like DNA binding protein [Arabidopsis thaliana]
>gi|7269024|emb|CAB80757.1| (AL161494) putative protein
[Arabidopsis thaliana]
Length = 411
Frame 2 hits (HSPs): ___
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 411
0 150 300
Plus Strand HSPs:
Score = 85 (29.9 bits), Expect = 2.4, Sum P(2) = 0.91
Identities = 26/86 (30%), Positives = 41/86 (47%), Frame = +1
Query: 37 QEAAASSSSNSDHHHLKFKNEFNINI----PVTTTSIQNINVDSQDYHAILKTKLNLACA 204
Q + S N +F++ + N+ P+TT + + VDS DY +LK KL CA
Sbjct: 75 QSLPSVSGQNDFEDDSRFRDRDSGNLDCAAPMTT---KTVIVDSDDYRRVLKNKLETECA 131
Query: 205 AVAMTRGSLVKSQNPATFSDSGPQASNSS 291
V R VK ++ + ++ Q SS
Sbjct: 132 TVVSLRVGSVKPEDSTSSPETQLQPVQSS 160
Score = 38 (13.4 bits), Expect = 2.4, Sum P(2) = 0.91
Identities = 9/21 (42%), Positives = 14/21 (66%), Frame = +2
Query: 395 PSSMQNKPAVAMRPTISGSSR 457
P+ ++ K V+M+ SGSSR
Sbjct: 174 PAEVK-KTGVSMKQVTSGSSR 193
>gi|10954095|gb|AAG25727.1|AF310222_1 (AF310222) bZIP protein BZO2H1
[Arabidopsis thaliana]
Length = 417
Frame 1 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | 417
0 150 300
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 3.6, P = 0.97
Identities = 40/142 (28%), Positives = 65/142 (45%), Frame = +1
Query: 37 QEAAASSSSNSDHHHLKFKNEFNINI----PVTTTSIQNINVDSQDYHAILKTKLNLACA 204
Q + S N +F++ + N+ P+TT + + VDS DY +LK KL CA
Sbjct: 75 QSLPSVSGQNDFEDDSRFRDRDSGNLDCAAPMTT---KTVIVDSDDYRRVLKNKLETECA 131
Query: 205 AVAMTRGSLVKSQNPATFSDSGPQASNSSEDGLQATLKGSGPSGNDPSKLQNKDVKAQIG 384
V R VK ++ + ++ Q SS Q +L G G S L +VK + G
Sbjct: 132 TVVSLRVGSVKPEDSTSSPETQLQPVQSSPL-TQGSLMTPGELGVT-SSLP-AEVK-KTG 187
Query: 385 IPSSIFHAKQTCCRNEANDKWIIQEN 462
+ S+ R ++D+ + +EN
Sbjct: 188 V--SMKQVTSGSSREYSDDEDLDEEN 211
>gi|5924068|gb|AAD56435.1|AF162863_3 (AF162863) TpgX [Staphylococcus
epidermidis]
Length = 140
Frame 1 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | 140
0 50 100
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 4.4, P = 0.99
Identities = 22/66 (33%), Positives = 32/66 (48%), Frame = +1
Query: 301 LQATLKGSGPSGNDPSKLQNKDVKAQIGIPSSIFH-AKQTCCRNEANDKWIIQENNPDDE 477
L L G GND S ++ K + SS H +K+ RN+ N+K QENN + E
Sbjct: 11 LSLMLVGCSNGGNDESSHKDDSSKTEQKDKSSSQHDSKKDSKRNDTNNKQDNQENNTNKE 70
Query: 478 EVGXKN 495
+ +N
Sbjct: 71 QTNNQN 76
>gi|7524842 ref|NP_045844.1| ORF60a [Chlorella vulgaris]
>gi|7515405|pir||T07272 hypothetical protein 60a - Chlorella
vulgaris chloroplast >gi|2224436|dbj|BAA57920.1| (AB001684) ORF60a
[Chlorella vulgaris]
Length = 60
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | 60
0 20 40
Plus Strand HSPs:
Score = 63 (22.2 bits), Expect = 4.8, P = 0.99
Identities = 15/31 (48%), Positives = 17/31 (54%), Frame = +2
Query: 8 NRSGPFSSSYRKLLLLLPLILIIIILNSKTN 100
NR GP Y LL LP LII+ L +K N
Sbjct: 29 NRRGPTKKIYDIFLLYLPSTLIILKLTNKNN 59
>gi|4996499|dbj|BAA78501.1| (AB021826) serine repeat antigen [Plasmodium
falciparum]
Length = 261
Frame 1 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | | | 261
0 50 100 150 200 250
Plus Strand HSPs:
Score = 80 (28.2 bits), Expect = 8.8, P = 1.0
Identities = 33/142 (23%), Positives = 57/142 (40%), Frame = +1
Query: 70 DHHHLKFKNEFNINIPVTTTSIQNINVDSQDYHAILKTKLNLACAAVAM--TRGSLVKSQ 243
D+ LK N N + I+VD++D + L+T L A++ GSL K +
Sbjct: 98 DYMGLKVTGPCNENFIMFLVPHIYIDVDTEDTNIELRTTLKKTNNAISFESNSGSLEKKK 157
Query: 244 NPATFSD--SGPQASNSSEDGLQATLKGSGPSGNDPSKLQNKDVKAQIGIPSSIFHAKQT 417
S+ +G Q+S+SS ++ S S N S + + SS + +
Sbjct: 158 YVKLPSNGTTGEQSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSS 217
Query: 418 CCRNEANDKWIIQENNPDDEEV 483
+ ++ + N PD V
Sbjct: 218 SSSSSSSSSESLPANGPDSPTV 239
>gi|11273963|pir||T45720 probable transcription factor MYB94 - Arabidopsis
thaliana >gi|6522543|emb|CAB61986.1| (AL132955) putative
transcription factor MYB94 [Arabidopsis thaliana]
Length = 333
Frame 1 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | 333
0 150 300
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 10., P = 1.0
Identities = 31/92 (33%), Positives = 46/92 (50%), Frame = +1
Query: 97 EFNINIPVTTTSIQNINVDSQDYHAILKTKLNLACAAVAMTRGSLVKSQNPATFS--DSG 270
+F+I+ TTS Q+ N + L+T +N+A A+ S+ K QNP FS D G
Sbjct: 135 DFSISNK-NTTSHQSSNSSKGQWERRLQTDINMAKQALCDAL-SIDKPQNPTNFSIPDLG 192
Query: 271 --PQASNSSEDGLQATLKGSGP--SGNDPSKLQN 360
P +S+SS T + + P SG S +N
Sbjct: 193 YGPSSSSSSTTTTTTTTRNTNPYPSGVYASSAEN 226
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.95
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.375 0.169 0.747
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.342 0.151 0.451
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.323 0.134 0.408
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.348 0.151 0.525
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.377 0.172 0.715
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.342 0.152 0.473
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 189 187 10. 76 3 12 22 0.12 34
31 0.12 37
+2 0 189 187 10. 76 3 12 22 0.12 34
31 0.12 37
+1 0 189 187 10. 76 3 12 22 0.12 34
31 0.12 37
-1 0 189 187 10. 76 3 12 22 0.12 34
31 0.12 37
-2 0 189 187 10. 76 3 12 22 0.12 34
31 0.12 37
-3 0 189 189 10. 76 3 12 22 0.12 34
31 0.12 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 19
No. of states in DFA: 597 (59 KB)
Total size of DFA: 211 KB (256 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 183.95u 1.15s 185.10t Elapsed: 00:00:32
Total cpu time: 184.00u 1.17s 185.17t Elapsed: 00:00:32
Start: Wed Oct 3 11:35:40 2001 End: Wed Oct 3 11:36:12 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000