A web supplement to the paper "A census of membrane-bound and intracellular signal transduction proteins in bacteria:
Bacterial IQ, extroverts and introverts" by M. Y. Galperin, published in BMC Microbiology 2005, 5:35. Abstract. Full text (PDF). Previous version of this table, prepared for the review "Bacterial signal transduction network in a genomic perspective"
by M. Y. Galperin, published in Environ. Microbiol. 2004, 6, 552-567. Abstract. Full text (PDF) .

The first variant of this table, prepared for the review by M. Y. Galperin, A. N. Nikolskaya, and E. V. Koonin
"Novel domains of the prokaryotic two-component signal transduction system",
published in FEMS Microbiol. Lett. 2001, 203, 11-21. Abstract. Full text (PDF).

Please send your corrections, questions and comments to Michael Galperin.

No.	Organism name	Phylum	GenBank entry	All proteins	HisKin	MCP	STYK	GGDEF	EAL	HD-GYP	AC1	AC2	AC3	Total	TM	%TM
Actinobacteria
1	Streptomyces coelicolor	Actino	AL645882	8154	95*(84)	-	37(18)	7*(2)	5(2)	1(1)	-	-	1(0)	142	105	74%
2	Streptomyces avermitilis	Actino	BA000030	7671	78(67)	-	35(16)	7*(2)	5(2)	1(1)	-	-	1(0)	123	86	70%
3	Nocardia farcinica	Actino	AP006618	5924	36(31)	-	25(14)	8(2)	2(1)	-	-	-	4(2)	73	49	67%
4	Mycobacterium avium	Actino	AE016958	4350	19(16)	-	12(7)	4*(2)	3(1)	1(0)	-	-	12(7)	49	32	65%
5	Mycobacterium tuberculosis	Actino	AL123456	3927	14*(10)	-	13(8)	1(0)	2(0)	-	-	-	16(6)	46	24	52%
6	Mycobacterium bovis	Actino	BX248333	3920	13*(10)	-	13(7)	1(0)	2(0)	-	-	-	16(6)	45	23	51%
7	Symbiobacterium thermophilum	Actino	AP006840	3337	27(21)	13*(13)	1(1)	9(4)	3(2)	4(0)	-	-	-	54	39	72%
8	Corynebacterium glutamicum	Actino	BA000036	2993	13(12)	-	4(2)	1(1)	1(1)	-	-	-	1(1)	19	16	84%
9	Corynebacterium efficiens	Actino	BA000035	2950	13(13)	-	4(3)	-	-	-	-	-	1(1)	18	17	94%
10	Propionibacterium acnes	Actino	AE017283	2297	12(11)	-	4(3)	-	-	-	-	-	-	16	14	88%
11	Corynebacterium diphtheriae	Actino	BX248353	2272	11(11)	-	4(2)	-	-	-	-	-	1(1)	16	14	88%
12	Leifsonia xyli	Actino	AE016822	2030	16(15)	-	6(6)	-	-	-	-	-	-	22	21	95%
13	Bifidobacterium longum	Actino	AE014295	1727	9(8)	-	7(6)	-	-	-	-	-	-	16	14	88%
14	Mycobacterium leprae	Actino	AL450380	1605	5(4)	-	6(3)	3(1)	2(0)	-	-	-	4(1)	19	9	47%
15	Tropheryma whipplei	Actino	BX072543	783	2(1)	-	4(4)	-	-	-	-	-	-	6	5	83%
Cyanobacteria		Phylum	GenBank	Proteins	HisKin	MCP	STYK	GGDEF	EAL	HD-GYP	AC1	AC2	AC3	Total	TM	%TM
16	Nostoc sp. PCC 7120	Cyano	BA000019	6055	134(40)	3(2)	52(15)	14(4)	7(2)	2(0)	-	-	6(2)	212	63	30%
17	Gloeobacter violaceus	Cyano	BA000045	4430	46(16)	-	20(9)	1(0)	-	1(0)	-	1(0)	1(0)	70	25	36%
18	Synechocystis sp. PCC 6803	Cyano	BA000022	3166	46(16)	4(3)	13(5)	22(5)	13(2)	2(0)	-	-	3(1)	94	30	32%
19	Synechococcus elongatus PCC 6301	Cyano	AP008231	2525	15(4)	2(2)	8(4)	17(8)	9(4)	2(0)	-	-	2(2)	47	21	45%
20	Synechococcus sp. WH 8102	Cyano	BX548020	2517	6(2)	-	3(3)	-	-	-	-	-	-	9	5	56%
21	Thermosynechococcus elongatus	Cyano	BA000039	2475	19(6)	3*(1)	17(7)	9*(0)	5(0)	1(0)	-	-	2(1)	51	15	29%
22	Prochlorococcus marinus CCMP1375	Cyano	AE017126	1882	5(2)	-	3(2)	-	-	-	-	-	-	8	4	50%
Alpha-proteobacteria		Phylum	GenBank	Proteins	HisKin	MCP	STYK	GGDEF	EAL	HD-GYP	AC1	AC2	AC3	Total	TM	%TM
23	Bradyrhizobium japonicum	Alpha	BA000040	8317	92(59)	35*(31)	4*(2)	35(24)	27(17)	3(0)	-	-	37(12)	210	130	62%
24	Mesorhizobium loti	Alpha	BA000012	7275	62*(36)	1(1)	3(1)	32(17)	18(10)	1(0)	-	-	12*(1)	113	57	50%
25	Sinorhizobium meliloti	Alpha	AL591688	6205	48(32)	9(7)	2(0)	17*(9)	13*(6)	-	-	-	28(12)	107	61	57%
26	Agrobacterium tumefaciens	Alpha	AE008688	5402	53(32)	20(14)	2(1)	27*(17)	14*(10)	1(0)	-	-	3(2)	109	69	63%
27	Rhodopseudomonas palustris	Alpha	BX571963	4813	66(35)	29(25)	5(3)	36(21)	18(9)	2(0)	-	-	7(4)	149	90	60%
28	Silicibacter pomeroyi	Alpha	CP000031	4252	23(18)	-	2(1)	5(3)	2(1)	-	-	-	11(3)	42	25	60%
29	Caulobacter crescentus	Alpha	AE005673	3737	62(39)	18*(12)	2(1)	10*(4)	10(5)	-	-	-	3(1)	98	59	60%
30	Brucella suis	Alpha	AE014291	3271	21(17)	-	2(1)	8(6)	5(4)	-	-	-	-	33	26	79%
31	Brucella melitensis	Alpha	AE008917	3198	22(13)	-	2(1)	9(6)	5(4)	-	-	-	-	35	22	63%
32	Zymomonas mobilis	Alpha	AE008692	1998	15(10)	3(2)	1(1)	4(3)	3(1)	-	-	-	-	24	16	67%
33	Bartonella henselae	Alpha	BX897699	1488	11(9)	-	1(1)	1(1)	1(1)	-	-	-	-	13	11	85%
34	Rickettsia conorii	Alpha	AE006914	1374	5(4)	-	1(0)	1(0)	1(1)	-	-	-	-	8	4	50%
35	Wolbachia endosym-biont of Drosophila	Alpha	AE017196	1195	2(1)	-	1(1)	1(0)	-	-	-	-	-	4	2	50%
36	Bartonella quintana	Alpha	BX897700	1142	11(9)	-	1(1)	1(1)	1(1)	-	-	-	-	13	11	85%
37	Anaplasma marginale	Alpha	CP000030	949	3(3)	-	1(1)	1(0)	-	-	-	-	-	5	4	80%
38	Rickettsia typhi	Alpha	AE017197	838	4(4)	-	1(0)	1(0)	1(1)	-	-	-	-	7	5	71%
39	Rickettsia prowazekii	Alpha	AJ235269	835	4(4)	-	1(0)	1(0)	1(1)	-	-	-	-	7	5	71%
Beta-proteobacteria		Phylum	GenBank	Proteins	HisKin	MCP	STYK	GGDEF	EAL	HD-GYP	AC1	AC2	AC3	Total	TM	%TM
40	Burkholderia pseudomallei	Beta	BX571965	5728	46(36)	21(21)	4(3)	10(8)	11(4)	2(0)	-	1(0)	-	90	68	76%
41	Ralstonia solanacearum	Beta	AL646052	5116	44(37)	22(22)	3(1)	22*(16)	14(6)	2(0)	-	1(0)	-	98	77	79%
42	Bordetella bronchiseptica	Beta	BX470250	4994	25(21)	8(7)	4(3)	15(9)	9(5)	2(1)	-	-	-	58	44	76%
43	Burkholderia mallei	Beta	CP000011	4764	37(27)	17(17)	3(2)	8(7)	8(4)	2(0)	-	-	-	71	53	75%
44	Azoarcus sp. EbN1	Beta	CR555306	4603	42(28)	2(2)	7(3)	26(11)	23(7)	5(1)	-	-	1(0)	87	46	53%
45	Chromobacterium violaceum	Beta	AE016825	4407	50(32)	42(33)	4(3)	43(20)	26(7)	11(0)	-	-	-	160	91	57%
46	Bordetella parapertussis	Beta	BX470249	4185	22(18)	6(6)	4(3)	13(8)	9(5)	2(1)	-	-	-	51	38	75%
47	Bordetella pertussis	Beta	BX470248	3436	18(16)	5(5)	3(2)	7(3)	3(1)	1(0)	-	-	-	35	26	74%
48	Nitrosomonas europaea	Beta	AL954747	2461	15(11)	3(3)	2(1)	6(3)	9(3)	-	-	-	3(1)	34	20	59%
49	Neisseria meningitidis	Beta	AE002098	2079	5(5)	-	1(1)	-	-	-	-	-	-	6	6	100%
Gamma-proteobacteria		Phylum	GenBank	Proteins	HisKin	MCP	STYK	GGDEF	EAL	HD-GYP	AC1	AC2	AC3	Total	TM	%TM
50	Pseudomonas syringae	Gamma	AE016853	5608	69*(42)	48*(41)	8(2)	35(18)	21(14)	1(0)	1(0)	-	-	164	109	67%
51	Pseudomonas aeruginosa	Gamma	AE004091	5567	63(45)	26(23)	8(2)	33(19)	21(14)	3(0)	1(0)	-	1(1)	140	96	69%
52	Photobacterium profundum	Gamma	CR354531	5480	53(43)	39(37)	8(3)	32*(18)	16(10)	2(0)	1(0)	1(0)	-	142	105	74%
53	Pseudomonas putida	Gamma	AE015451	5350	67(44)	27(22)	5(1)	36(21)	21(11)	2(1)	1(0)	-	-	142	90	63%
54	Escherichia coli O157:H7	Gamma	BA000007	5253	29(27)	5(5)	3(2)	19(12)	14(10)	-	1(0)	-	-	66	51	77%
55	Vibrio vulnificus CMCP6	Gamma	AE016795	5024	51(40)	52(43)	4(1)	66(38)	33(14)	13(4)	1(0)	-	-	200	126	63%
56	Vibrio parahaemolyticus	Gamma	BA000031	4832	50(42)	30(26)	6(2)	44*(27)	29(14)	5(1)	1(0)	1(0)	-	150	102	68%
57	Salmonella enterica serovar Typhi	Gamma	AL513382	4758	30(28)	6(4)	3(1)	12(11)	16(11)	-	1(0)	-	-	61	50	82%
58	Photorhabdus luminescens	Gamma	BX470251	4683	18(16)	2(2)	1(1)	-	-	-	1(0)	-	-	22	19	86%
59	Salmonella typhimurium LT2	Gamma	AE006468	4527	32(29)	9(7)	1(1)	12(11)	15(11)	-	1(0)	-	-	63	53	84%
60	Erwinia carotovora	Gamma	BX950851	4472	28(23)	36(36)	2(1)	16*(11)	11(5)	-	1(0)	1(0)	-	92	74	80%
61	Shewanella oneidensis	Gamma	AE014299	4467	46(35)	26(24)	7(1)	52*(26)	27*(14)	9(1)	1(0)	1(0)	1(1)	148	90	61%
62	Shigella flexneri	Gamma	AE005674	4441	25(22)	4(4)	2(2)	8(6)	8(6)	-	1(0)	-	-	46	37	80%
63	Xanthomonas axonopodis	Gamma	AE008923	4427	61(38)	21(18)	10(3)	30(14)	14(5)	3(0)	-	-	1(1)	130	75	58%
64	Escherichia coli K12	Gamma	U00096	4242	30(27)	5(5)	2(2)	19(12)	17(11)	-	1(0)	-	-	67	52	78%
65	Xanthomonas campestris	Gamma	AE008922	4181	55(31)	20(16)	6(3)	31(15)	14(5)	3(0)	-	-	1(1)	120	67	56%
66	Salmonella enterica serovar Paratyphi	Gamma	CP000026	4093	26(24)	6(4)	1(1)	13(12)	15(11)	-	1(0)	-	-	55	46	84%
67	Yersinia pestis	Gamma	AL590842	4067	21(19)	6(4)	4(1)	5(5)	6(4)	-	1(0)	-	-	40	31	78%
68	Yersinia pseudotuberculosis	Gamma	BX936398	4038	26(25)	7(6)	4(1)	6(5)	6(4)	1(0)	1(0)	1(0)	-	49	38	78%
69	Vibrio cholerae	Gamma	AE003852	3835	43(32)	45(37)	1(1)	41(27)	22(8)	9(2)	1(0)	-	-	152	100	66%
70	Acinetobacter sp. ADP1	Gamma	CR543861	3325	18(14)	-	6(1)	10(6)	4(1)	-	-	-	1(1)	36	22	61%
71	Methylococcus capsulatus	Gamma	AE017282	2959	17(14)	2(1)	3(2)	16(8)	12(5)	1(0)	-	-	-	40	26	65%
72	Legionella pneumophila	Gamma	AE017354	2942	12(7)	-	5(3)	19(11)	14(6)	-	-	-	5(4)	44	26	59%
73	Xylella fastidiosa 9a5c	Gamma	AE003849	2832	14(9)	1(1)	2(1)	3(1)	3(1)	1(0)	-	-	-	23	13	57%
74	Idiomarina loihiensis	Gamma	AE017340	2640	26(18)	15(13)	2(2)	33(17)	20(11)	1(0)	-	-	-	80	51	64%
75	Mannheimia succiniciproducens	Gamma	AE016827	2384	5(5)	-	1(0)	-	-	-	1(0)	-	-	7	5	71%
76	Coxiella burnetii	Gamma	AE016828	2046	7(2)	-	4(1)	0*	-	-	-	-	1(0)	12	3	25%
77	Pasteurella multocida	Gamma	AE004439	2015	9(9)	-	1(1)	-	-	-	1(0)	-	-	11	10	91%
78	Francisella tularensis	Gamma	AJ749949	1804	2(2)	-	1(1)	-	-	-	-	-	-	3	3	100%
79	Haemophilus ducreyi	Gamma	AE017143	1717	1(1)	-	1(1)	-	-	-	1(0)	-	-	3	2	67%
80	Haemophilus influenzae	Gamma	L42023	1711	4(3)	-	1(0)	-	-	-	1(0)	-	-	6	3	50%
81	Wigglesworthia glossinidia	Gamma	BA000021	617	-	-	1(1)	-	-	-	-	-	-	1	1	100%
82	Candidatus Blochmannia floridanus	Gamma	BX248583	583	-	-	1(1)	-	-	-	-	-	-	1	1	100%
83	Buchnera aphidicola str. APS	Gamma	BA000003	574	-	-	-	-	-	-	-	-	-	-	-	nd
Delta-proteobacteria		Phylum	GenBank	Proteins	HisKin	MCP	STYK	GGDEF	EAL	HD-GYP	AC1	AC2	AC3	Total	TM	%TM
84	Bdellovibrio bacteriovorus	Delta	BX842601	3587	49(30)	20(18)	5(1)	5(1)	1(0)	6(0)	-	-	4(4)	90	54	60%
85	Desulfovibrio vulgaris	Delta	AE017285	3531	64(36)	28(28)	1(0)	26(11)	10(3)	14(2)	-	1(0)	-	135	76	56%
86	Geobacter sulfurreducens	Delta	AE017180	3446	92(55)	33(30)	1(1)	28(13)	9(4)	10(0)	-	-	-	165	99	60%
87	Desulfotalea psychrophila	Delta	CR522870	3236	31(24)	21(20)	4(2)	23(12)	4(2)	10(5)	-	-	1(0)	91	58	64%
Epsilon-proteobacteria		Phylum	GenBank	Proteins	HisKin	MCP	STYK	GGDEF	EAL	HD-GYP	AC1	AC2	AC3	Total	TM	%TM
88	Wolinella succinogenes	Epsilon	BX571656	2044	39(22)	31(27)	2(1)	21(10)	13*(5)	2(0)	-	-	1(1)	99	63	64%
89	Helicobacter hepaticus	Epsilon	AE017125	1875	5(3)	9(8)	-	1(0)	-	-	-	-	-	15	11	73%
90	Campylobacter jejuni	Epsilon	AL111168	1634	7(4)	10(6)	-	1(0)	-	-	-	-	-	18	10	56%
91	Helicobacter pylori	Epsilon	AE000511	1576	4(1)	4(3)	1(0)	-	-	-	-	-	-	9	4	44%
Firmicutes		Phylum	GenBank	Proteins	HisKin	MCP	STYK	GGDEF	EAL	HD-GYP	AC1	AC2	AC3	Total	TM	%TM
92	Bacillus anthracis str. Ames	Firmi	AE016879	5311	47(43)	13(11)	5(2)	9*(6)	7(4)	1(1)	-	-	-	76	62	82%
93	Bacillus cereus ATCC 14579	Firmi	AE016877	5255	48(46)	13(11)	5(3)	7*(4)	5(2)	-	-	-	-	74	64	86%
94	Bacillus thuringiensis	Firmi	AE017355	5117	58(50)	12(10)	4(2)	9*(6)	7(4)	1(1)	-	-	-	85	68	80%
95	Bacillus licheniformis	Firmi	AE017333	4196	36(27)	11*(9)	3(1)	4*(3)	2(0)	-	-	-	-	56	40	71%
96	Bacillus subtilis	Firmi	AL009126	4105	36(30)	10(8)	4(3)	4*(3)	3(1)	-	-	-	-	56	44	79%
97	Bacillus halodurans	Firmi	BA000004	4066	44(36)	12(10)	4(3)	4*(1)	2(0)	2(0)	-	-	-	67	50	75%
98	Clostridium acetobutylicum	Firmi	AE001437	3848	37(32)	38*(30)	5(3)	10*(7)	4(1)	9(1)	-	1(0)	-	101	72	71%
99	Geobacillus kaustophilus	Firmi	BA000043	3540	26*(18)	6(5)	5(4)	8*(4)	5(2)	3(1)	-	-	-	50	32	64%
100	Oceanobacillus iheyensis	Firmi	BA000028	3500	19(16)	8(6)	4(3)	3*(1)	2(0)	2(0)	-	-	-	37	26	70%
101	Enterococcus faecalis	Firmi	AE016830	3267	16(15)	-	1(1)	0*	-	-	-	-	-	17	16	94%
102	Lactobacillus plantarum	Firmi	AL935263	3059	14(13)	-	3(3)	3*(3)	5(1)	-	-	-	-	25	20	80%
103	Listeria innocua	Firmi	AL592022	2968	15(13)	2(1)	2(2)	3*(3)	3(0)	-	-	-	-	25	19	76%
104	Listeria monocytogenes	Firmi	AL591824	2846	15(13)	2(1)	2(2)	3*(3)	3(0)	-	-	-	-	25	19	76%
105	Clostridium perfringens	Firmi	BA000016	2723	27(24)	-	3(2)	6*(4)	3(2)	1(1)	-	1(0)	-	40	31	76%
106	Staphylococcus aureus N315	Firmi	BA000018	2624	17(15)	-	2(1)	1*(1)	-	-	-	-	-	20	17	85%
107	Thermoanaerobacter tengcongensis	Firmi	AE008691	2588	17(12)	9(7)	3(3)	6*(1)	1(0)	6(0)	-	-	-	41	23	56%
108	Staphylococcus epidermidis	Firmi	AE015929	2419	15(13)	-	2(1)	1*(1)	-	-	-	-	-	18	15	83%
109	Clostridium tetani	Firmi	AE015927	2373	31(24)	20(16)	1(1)	6*(4)	1(0)	1(0)	-	1(0)	-	61	45	74%
110	Lactococcus lactis	Firmi	AE005176	2321	7(7)	-	1(1)	0*	-	-	-	-	-	8	8	100%
111	Streptococcus agalactiae	Firmi	AE009948	2124	18(18)	-	1(1)	0*	-	-	-	-	-	19	19	100%
112	Streptococcus pneumoniae TIGR4	Firmi	AE005672	2094	13(13)	-	4(1)	0*	-	-	-	-	-	17	14	82%
113	Streptococcus mutans	Firmi	AE014133	1960	14(13)	-	1(0)	0*	-	-	-	-	-	15	13	87%
114	Streptococcus thermophilus	Firmi	CP000024	1915	9*(8)	-	4(2)	0*	-	-	-	-	-	13	10	77%
115	Lactobacillus johnsonii	Firmi	AE017198	1821	9(9)	-	1(1)	0*	-	-	-	-	-	10	10	100%
116	Streptococcus pyogenes M1 GAS	Firmi	AE004092	1697	12(12)	-	1(1)	0*	-	-	-	-	-	13	13	100%
117	Mycoplasma penetrans	Firmi	BA000026	1037	-	-	2(1)	-	-	-	-	-	-	2	1	50%
118	Mycoplasma mycoides	Firmi	BX293980	1016	-	-	1(1)	-	-	-	-	-	-	1	1	100%
119	Mycoplasma pulmonis	Firmi	AL445566	782	-	-	1(1)	0*	-	-	-	-	-	1	1	100%
120	Onion yellows phytoplasma	Firmi	AP006628	754	-	-	-	0*	-	-	-	-	-	-	-	nd
121	Mycoplasma gallisepticum	Firmi	AE015450	726	-	-	1(1)	-	-	-	-	-	-	1	1	100%
122	Mycoplasma hyopneumoniae	Firmi	AE017332	691	-	-	-	0*	-	-	-	-	-	-	-	nd
123	Mycoplasma pneumoniae	Firmi	U00089	689	-	-	1(1)	-	-	-	-	-	-	1	1	100%
124	Mesoplasma florum	Firmi	AE017263	682	-	-	1(1)	-	-	-	-	-	-	1	1	100%
125	Mycoplasma mobile	Firmi	AE017308	633	-	-	2(1)	0*	-	-	-	-	-	2	1	50%
126	Ureaplasma parvum	Firmi	AF222894	614	-	-	1(1)	-	-	-	-	-	-	1	1	100%
127	Mycoplasma genitalium	Firmi	L43967	484	-	-	1(1)	-	-	-	-	-	-	1	1	100%
Other bacterial phyla		Phylum	GenBank	Proteins	HisKin	MCP	STYK	GGDEF	EAL	HD-GYP	AC1	AC2	AC3	Total	TM	%TM
128	Rhodopirellula baltica	Other	BX119912	7325	46*(22)	-	60(38)	9*(2)	3(0)	6(0)	-	1(0)	3(2)	126	64	51%
129	Bacteroides thetaiotaomicron	Other	AE015928	4778	85(73)	-	2(2)	-	-	-	-	-	-	87	75	86%
130	Bacteroides fragilis	Other	AP006841	4625	60(47)	-	-	-	-	-	-	-	-	60	47	78%
131	Deinococcus radiodurans	Other	AE000513	3184	21(12)	3(3)	9*(2)	16(7)	5(0)	4(0)	-	-	-	54	24	44%
132	Chlorobium tepidum	Other	AE006470	2252	8(2)	-	-	1(1)	-	-	-	-	1(0)	10	3	30%
133	Thermus thermophilus	Other	AE017221	2210	11(8)	-	4(1)	6*(5)	2(0)	5(0)	-	-	1(0)	28	14	57%
134	Fusobacterium nucleatum	Other	AE009951	2066	7(6)	-	-	-	-	-	-	-	1(0)	8	6	75%
135	Parachlamydia sp. UWE25	Other	BX908798	2031	2(1)	-	4(0)	-	-	-	-	-	-	6	1	17%
136	Porphyromonas gingivalis	Other	AE015924	1909	6(6)	-	-	-	-	-	-	-	-	6	6	100%
137	Thermotoga maritima	Other	AE000512	1858	8(4)	7(6)	-	9*(4)	-	10(2)	-	-	-	34	16	47%
138	Aquifex aeolicus	Other	AE000657	1560	4(2)	-	2(0)	11*(4)	6*(1)	1(0)	-	-	-	20	6	30%
139	Chlamydophila pneumoniae CWL029	Other	AE001363	1054	1(0)	-	3(0)	-	-	-	-	-	-	4	-	0%
140	Chlamydophila caviae	Other	AE015925	1005	1(0)	-	3(0)	-	-	-	-	-	-	4	-	0%
141	Chlamydia muridarum	Other	AE002160	904	1(0)	-	3(0)	-	-	-	-	-	-	4	-	0%
142	Chlamydia trachomatis	Other	AE001273	895	1(0)	-	3(0)	-	-	-	-	-	-	4	-	0%
Spirochaetes		Phylum	GenBank	Proteins	HisKin	MCP	STYK	GGDEF	EAL	HD-GYP	AC1	AC2	AC3	Total	TM	%TM
143	Leptospira interrogans	Spiro	AE010300	4727	47(20)	13(13)	5(2)	16(3)	8(0)	2(0)	-	-	18(12)	107	50	47%
144	Treponema denticola	Spiro	AE017226	2767	7(3)	20(19)	-	9(4)	2(2)	4(0)	-	-	9(7)	49	33	67%
145	Borrelia burgdorferi	Spiro	AE001115	1639	4(1)	5(4)	-	1(0)	1(0)	1(0)	-	1(0)	-	13	5	39%
146	Treponema pallidum	Spiro	AE000520	1036	1(0)	4(4)	-	1*(0)	-	3(0)	-	-	1(1)	10	5	50%
147	Borrelia garinii	Spiro	CP000013	932	4(1)	5(4)	-	1(0)	1(0)	1(0)	-	1(0)	-	13	5	39%
Archaea		Phylum	GenBank	Proteins	HisKin	MCP	STYK	GGDEF	EAL	HD-GYP	AC1	AC2	AC3	Total	TM	%TM
148	Methanosarcina acetivorans	Archaea	AE010299	4540	53(11)	2(1)	5(2)	-	-	-	-	1(0)	-	61	14	23%
149	Haloarcula marismortui	Archaea	AY596297	4240	59(15)	17(9)	8(3)	-	-	-	-	1(0)	-	85	27	32%
150	Methanosarcina mazei	Archaea	AE008384	3371	33(9)	3(1)	4(1)	-	-	-	-	1(0)	-	41	11	28%
151	Sulfolobus solfataricus	Archaea	AE006641	2977	-	-	8(3)	-	-	-	-	1(0)	-	9	3	38%
152	Sulfolobus tokodaii	Archaea	BA000023	2825	-	-	12(6)	-	-	-	-	1(0)	-	13	6	50%
153	Halobacterium salinarum	Archaea	AE004437	2622	13(4)	17(12)	5(1)	-	-	-	-	1(0)	-	36	17	49%
154	Pyrobaculum aerophilum	Archaea	AE009441	2605	-	-	5(1)	-	-	-	-	1(0)	-	6	1	20%
155	Archaeoglobus fulgidus	Archaea	AE000782	2420	14*(3)	2(0)	3(0)	-	-	-	-	1(0)	-	20	3	16%
156	Pyrococcus furiosus	Archaea	AE009950	2125	-	-	5(0)	-	-	-	-	2(0)	-	7	-	0%
157	Pyrococcus horikoshii	Archaea	BA000001	1955	1(0)	5(3)	4(0)	-	-	-	-	2(0)	-	12	3	30%
158	Pyrococcus abyssi	Archaea	AL096836	1896	1(0)	5(3)	4(0)	-	-	-	-	2(0)	-	12	3	30%
159	Methanothermobacter thermautotrophicus	Archaea	AE000666	1873	16(8)	-	3(1)	-	-	-	-	1(0)	-	20	9	47%
160	Aeropyrum pernix	Archaea	BA000002	1841	-	-	4(1)	0*	-	-	-	1(0)	-	5	1	25%
161	Methanocaldococcus jannaschii	Archaea	L77117	1786	-	-	3(0)	-	-	-	-	1(0)	-	4	-	0%
162	Methanococcus maripaludis	Archaea	BX950229	1722	3(2)	4(4)	4(0)	-	-	-	-	1(0)	-	12	6	55%
163	Methanopyrus kandleri	Archaea	AE009439	1687	-	-	5(0)	0*	-	-	-	1(0)	-	6	-	0%
164	Picrophilus torridus	Archaea	AE017261	1535	-	-	5(2)	-	-	-	-	-	-	5	2	40%
165	Thermoplasma volcanium	Archaea	BA000011	1499	-	-	4(2)	-	-	-	-	-	-	4	2	50%
166	Thermoplasma acidophilum	Archaea	AL139299	1481	-	-	4(2)	-	-	-	-	-	-	4	2	50%
167	Nanoarchaeum equitans	Archaea	AE017199	535	-	-	3(0)	-	-	-	-	-	-	3	-	0%
No.	Organism name	Phylum	GenBank	Proteins	HisKin	MCP	STYK	GGDEF	EAL	HD-GYP	AC1	AC2	AC3	Total	TM	%TM