IP20096 full insert cDNA

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Finding cDNAs

UGID:100161 UniGene Dm.20646 Drosophila melanogaster (fruit fly)

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IP20096 full insert cDNA

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_563989.1	AGAP010933-PA	A. gambiae	77.9	154
NP_957044.1	ribosomal protein S19	D. rerio	71.6	141
NP_651195.1	Ribosomal protein S19b CG5338-PB	D. melanogaster	70.6	153
NP_075622.1	ribosomal protein S19	M. musculus	69.2	143
NP_001013.1	ribosomal protein S19	H. sapiens	69.2	143
NP_001080796.1	ribosomal protein S19	X. laevis	68.5	143
NP_492555.1	Ribosomal Protein, Small subunit family member (rps-19)	C. elegans	61.4	144
NP_186857.1	40S ribosomal protein S19 (RPS19A)	A. thaliana	57.0	142
XP_001699746.1	ribosomal protein S19, component of cytosolic 80S ribosome and 40S small subunit	C. reinhardtii	52.2	138
NP_014520.1	Protein component of the small (40S) ribosomal subunit, required for assembly and maturation of pre-40 S particles; mutations in human RPS19 are associated with Diamond Blackfan anemia; nearly identical to Rps19Bp; Rps19ap	S. cerevisiae	51.5	138
XP_328532.1	hypothetical protein	N. crassa	50.0	145

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	whole body; head; uncharacterized tissue; blood; mixed; ovary; embryonic tissue; fat body; gonad; testis

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

X73153.1	D.melanogaster mRNA for ribosomal protein S19	P
AY118868.1	Drosophila melanogaster GM26647 full insert cDNA	PA
BT030959.1	Drosophila melanogaster IP20096 full insert cDNA	PA

EST sequences (10 of 272) [Show all sequences]

AI063200.1	Clone GH02733	head	5' read	P
AI063219.1	Clone GH02771	head	5' read	PA
AI108024.1	Clone GH05948	head	5' read	P
AI108041.1	Clone GH05969	head	5' read	PA
AI108370.1	Clone GH07190	head	3' read	P
AI109506.1	Clone GH08725	head	5' read	P
AI109507.1	Clone GH08727	head	5' read	PA
AI110057.1	Clone GH09506	head	5' read	P
AI134117.1	Clone GH11478	head	5' read
AI134304.1	Clone GH11728	head	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria