R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|131390|sp|P16059|PSBP_PEA OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF
PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID MEMBRANE
PROTEIN) >gi|280396|pir||JS0771 photosystem II oxygen-evolving
complex protein 2 precursor - garden pea >gi|20617|emb|CAA33557.1|
(X15552) precursor polypeptide (AA -73 to 186) [Pisum sativum]
>gi|344006|dbj|BAA02553.1| (D13296) precursor for 23-kDa protein of
photosystem II [Pisum sativum]
Length = 259
Frame 2 hits (HSPs): _____________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 259
0 50 100 150 200 250
__________________
Annotated Domains:
PFAM PsbP: PsbP 57..259
PRODOM PD104317: PSBP_PEA 1..28
PRODOM PD005326: PSBP(6) 30..89
PRODOM PD003904: PSBP(7) 91..257
__________________
Plus Strand HSPs:
Score = 370 (130.2 bits), Expect = 4.6e-33, P = 4.6e-33
Identities = 72/106 (67%), Positives = 92/106 (86%), Frame = +2
Query: 47 MASTQCFLHH-HALTTPARSPSQRIMVSTKPNQLVCKAQKQEDIDVSPISRRLALTVLIG 223
MASTQCFLHH +A+TTP R+ SQR +V+TKPN +VCKAQKQ+D+ + +SRRLAL+VLIG
Sbjct: 1 MASTQCFLHHQYAITTPTRTLSQRQVVTTKPNHIVCKAQKQDDVVDAVVSRRLALSVLIG 60
Query: 224 AAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSK 364
AAAVGSKV PADA+ +G+ +FGK KT+TD+LPYNGDGF+L +P+K
Sbjct: 61 AAAVGSKVSPADAA-YGEAANVFGKAKTNTDYLPYNGDGFKLLVPAK 106
>gi|131393|sp|P18212|PSBP_TOBAC OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF
PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID MEMBRANE
PROTEIN) >gi|100360|pir||S15005 photosystem II oxygen-evolving
complex protein 2 - common tobacco >gi|19911|emb|CAA39039.1|
(X55354) photosystem II 23kDa polypeptide [Nicotiana tabacum]
Length = 265
Frame 2 hits (HSPs): __________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 265
0 50 100 150 200 250
__________________
Annotated Domains:
PFAM PsbP: PsbP 63..265
PRODOM PD104318: PSBP_TOBAC 1..28
PRODOM PD005326: PSBP(6) 30..95
PRODOM PD003904: PSBP(7) 97..262
__________________
Plus Strand HSPs:
Score = 364 (128.1 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 85/137 (62%), Positives = 100/137 (72%), Frame = +2
Query: 47 MASTQCFLHHHALTTPARSPSQRIMV-STKPNQL-VCKAQKQ----ED-IDVSPISRRLA 205
MASTQCFLHHHAL+TPAR+P R +V S KPNQL VC+AQKQ ED ++ +SRRLA
Sbjct: 1 MASTQCFLHHHALSTPARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRLA 60
Query: 206 LTVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAXK 385
LTVLIGAAAVGSKV PADA+ +G+ +FGKPKTDTDF YNGDGF+L IPSK +
Sbjct: 61 LTVLIGAAAVGSKVSPADAA-YGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNK-E 118
Query: 386 LNSPVPVCLXMRXNXDSPPN 445
+ P V L N D+ N
Sbjct: 119 VEYPGQV-LRFEDNFDATSN 137
>gi|131392|sp|P12302|PSBP_SPIOL OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF
PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID MEMBRANE
PROTEIN) >gi|81479|pir||S00005 photosystem II oxygen-evolving
complex protein 2 precursor - spinach >gi|21265|emb|CAA29055.1|
(X05511) 23 kDa OEC protein [Spinacia oleracea]
>gi|225596|prf||1307179A luminal protein 23kD [Spinacia oleracea]
Length = 267
Frame 2 hits (HSPs): __________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 267
0 50 100 150 200 250
__________________
Annotated Domains:
PFAM PsbP: PsbP 65..267
PRODOM PD104321: PSBP_SPIOL 1..32
PRODOM PD005326: PSBP(6) 34..97
PRODOM PD003904: PSBP(7) 99..265
__________________
Plus Strand HSPs:
Score = 342 (120.4 bits), Expect = 4.2e-30, P = 4.2e-30
Identities = 80/139 (57%), Positives = 98/139 (70%), Frame = +2
Query: 47 MASTQCFLHHHA-LTTPAR---SPSQRIM-VSTKPNQLVCKAQKQEDIDV----SPISRR 199
MAST CFLHHHA +++PA S +QR VS KPNQ+VCKAQKQ+D + S +SRR
Sbjct: 1 MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRR 60
Query: 200 LALTVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQA 379
LALTVLIGAAAVGSKV PADA+ +G+ +FGKPK +T+F+PYNGDGF+L +PSK
Sbjct: 61 LALTVLIGAAAVGSKVSPADAA-YGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSK 119
Query: 380 XKLNSPVPVCLXMRXNXDSPPN 445
K P V L N D+ N
Sbjct: 120 EK-EFPGQV-LRYEDNFDATSN 139
>gi|266856|sp|P29795|PSBP_LYCES OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF
PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID MEMBRANE
PROTEIN) >gi|72723|pir||F2TOX2 photosystem II oxygen-evolving
complex protein 2 precursor - tomato >gi|19317|emb|CAA44736.1|
(X63007) photosystem II 23 kDa protein [Lycopersicon esculentum]
Length = 258
Frame 2 hits (HSPs): __________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 258
0 50 100 150 200 250
__________________
Annotated Domains:
DOMO DM07153: PHOTOSYSTEMIIOXYGEN-EVOLVINGCOM 1..257
PFAM PsbP: PsbP 56..258
PRODOM PD036161: P93566(1) PSBP(1) 1..27
PRODOM PD005326: PSBP(6) 29..88
PRODOM PD003904: PSBP(7) 90..256
__________________
Plus Strand HSPs:
Score = 339 (119.3 bits), Expect = 8.8e-30, P = 8.8e-30
Identities = 74/132 (56%), Positives = 97/132 (73%), Frame = +2
Query: 50 ASTQCFLH-HHAL-TTPARSPSQRIMVSTKPNQLVCKAQKQEDIDVSPISRRLALTVLIG 223
ASTQCFLH +HAL ++PAR+ S + S KPNQL+C+AQKQ+D + +SRRLALT+LIG
Sbjct: 3 ASTQCFLHQYHALRSSPARTSS---VSSPKPNQLICRAQKQDDASNAAVSRRLALTLLIG 59
Query: 224 AAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAXKLNSPVP 403
AA+GSKV PADA+ +G+ +FGKPK +TDFLPYNGDGF+L +P+K + ++ P
Sbjct: 60 TAAIGSKVSPADAA-YGEAANVFGKPKENTDFLPYNGDGFKLQVPAK-WNPSKEVEYPGQ 117
Query: 404 VCLXMRXNXDSPPN 445
V L N DS N
Sbjct: 118 V-LRYEDNFDSTSN 130
>gi|100361|pir||S20936 photosystem II oxygen-evolving complex protein 2
precursor (clone T23-2AF) - common tobacco
>gi|20030|emb|CAA44293.1| (X62427) 23-kDa polypeptide of
photosystem II oxygen-evolving complex [Nicotiana tabacum]
Length = 266
Frame 2 hits (HSPs): __________________________
Annotated Domains: _______________
__________________________________________________
Database sequence: | | | | | | | 266
0 50 100 150 200 250
__________________
Annotated Domains:
Entrez domain: transit peptide (chloroplast) 1..80
PROSITE SULFATASE_1: Sulfatases signature 1. 12..24
__________________
Plus Strand HSPs:
Score = 338 (119.0 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 79/138 (57%), Positives = 98/138 (71%), Frame = +2
Query: 47 MASTQCFLHHHALTTPARSPSQR-IMVSTKPNQL-VCKAQ------KQEDIDVSPISRRL 202
MASTQCFLHHHAL+TPAR+ R I+ S K NQL VC+AQ +Q++++ +SRRL
Sbjct: 1 MASTQCFLHHHALSTPARTSLVRGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRRL 60
Query: 203 ALTVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAX 382
ALT+LIGAAAVGSKV PADA+ +G+ +FGKPKTDTDF YNGDGF+L IPSK
Sbjct: 61 ALTLLIGAAAVGSKVSPADAA-YGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNK- 118
Query: 383 KLNSPVPVCLXMRXNXDSPPN 445
++ P V L N D+ N
Sbjct: 119 EVEYPGQV-LRFEDNFDATSN 138
>gi|11134035|sp|P93566|PSBP_SOLTU OXYGEN-EVOLVING ENHANCER PROTEIN 2,
CHLOROPLAST PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING
SYSTEM OF PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID
MEMBRANE PROTEIN) >gi|1771778|emb|CAA67696.1| (X99320) 23 kDa
oxygen evolving protein of photosystem II [Solanum tuberosum]
Length = 260
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | | 260
0 50 100 150 200 250
Plus Strand HSPs:
Score = 332 (116.9 bits), Expect = 4.9e-29, P = 4.9e-29
Identities = 75/132 (56%), Positives = 98/132 (74%), Frame = +2
Query: 50 ASTQCFLH-HHAL-TTPARSPSQRIMVSTKPNQLVCKAQKQEDID--VSPISRRLALTVL 217
ASTQCFLH +HAL ++PAR+ S + S KPNQL+C+AQKQ+D + + +SRRLALT+L
Sbjct: 3 ASTQCFLHQYHALRSSPARTSS---VPSPKPNQLICRAQKQDDANNTSNAVSRRLALTLL 59
Query: 218 IGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAXKLNSP 397
IG AA+GSKV PADA+ +G+ +FGKPK +TDFLPYNGDGF+L IP+K + ++ P
Sbjct: 60 IGTAAIGSKVSPADAA-YGEAANVFGKPKENTDFLPYNGDGFKLQIPAK-WNPSKEIEFP 117
Query: 398 VPVCLXMRXNXDSPPN 445
V L N DS N
Sbjct: 118 GQV-LRYEDNFDSTSN 132
>gi|82188|pir||S17445 photosystem II oxygen-evolving complex protein 2
precursor - common tobacco (fragment) >gi|19896|emb|CAA41713.1|
(X58910) photosystem II 23 kDa polypeptide [Nicotiana tabacum]
Length = 229
Frame 2 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | | | 229
0 50 100 150 200
Plus Strand HSPs:
Score = 328 (115.5 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 78/140 (55%), Positives = 98/140 (70%), Frame = +2
Query: 47 MASTQCFLHHHALTTPA-RSPS----QRIMVSTKPNQLVCKAQKQ-----EDIDVSPISR 196
MASTQCFLH HAL++ A R+ S QR + S KPNQLVC+AQKQ +D + +SR
Sbjct: 1 MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSR 60
Query: 197 RLALTVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQ 376
RLALTVLIGAAA+GSKV PADA+ +G+ +FGKPK +TDFL YNGDGF+L +P+K
Sbjct: 61 RLALTVLIGAAAIGSKVSPADAA-YGEAANVFGKPKENTDFLAYNGDGFKLQVPAK-WNP 118
Query: 377 AXKLNSPVPVCLXMRXNXDSPPN 445
+ ++ P V L N DS N
Sbjct: 119 SKEVEFPGQV-LRYEDNFDSTSN 140
>gi|625546|pir||S44029 photosystem II oxygen-evolving complex protein 2
precursor - common tobacco >gi|417604|emb|CAA45699.1| (X64347) 23
kDa polypeptide of water-oxidizing complex of photosystem II
[Nicotiana tabacum]
Length = 268
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
Plus Strand HSPs:
Score = 328 (115.5 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 78/140 (55%), Positives = 98/140 (70%), Frame = +2
Query: 47 MASTQCFLHHHALTTPA-RSPS----QRIMVSTKPNQLVCKAQKQ-----EDIDVSPISR 196
MASTQCFLH HAL++ A R+ S QR + S KPNQLVC+AQKQ +D + +SR
Sbjct: 1 MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSR 60
Query: 197 RLALTVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQ 376
RLALTVLIGAAA+GSKV PADA+ +G+ +FGKPK +TDFL YNGDGF+L +P+K
Sbjct: 61 RLALTVLIGAAAIGSKVSPADAA-YGEAANVFGKPKKNTDFLAYNGDGFKLQVPAK-WNP 118
Query: 377 AXKLNSPVPVCLXMRXNXDSPPN 445
+ ++ P V L N DS N
Sbjct: 119 SKEVEFPGQV-LRYEDNFDSTSN 140
>gi|7443216|pir||S17446 photosystem II oxygen-evolving complex protein 2
precursor - common tobacco
Length = 268
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
Plus Strand HSPs:
Score = 328 (115.5 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 78/140 (55%), Positives = 98/140 (70%), Frame = +2
Query: 47 MASTQCFLHHHALTTPA-RSPS----QRIMVSTKPNQLVCKAQKQ-----EDIDVSPISR 196
MASTQCFLH HAL++ A R+ S QR + S KPNQLVC+AQKQ +D + +SR
Sbjct: 1 MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSR 60
Query: 197 RLALTVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQ 376
RLALTVLIGAAA+GSKV PADA+ +G+ +FGKPK +TDFL YNGDGF+L +P+K
Sbjct: 61 RLALTVLIGAAAIGSKVSPADAA-YGEAANVFGKPKENTDFLAYNGDGFKLQVPAK-WNP 118
Query: 377 AXKLNSPVPVCLXMRXNXDSPPN 445
+ ++ P V L N DS N
Sbjct: 119 SKEVEFPGQV-LRYEDNFDSTSN 140
>gi|11134156|sp|Q9SLQ8|PSBP_CUCSA OXYGEN-EVOLVING ENHANCER PROTEIN 2,
CHLOROPLAST PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING
SYSTEM OF PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID
MEMBRANE PROTEIN) >gi|6691487|dbj|BAA89317.1| (AB032245) 23kDa
polypeptide of the oxygen-evolving complex of photosystem II
[Cucumis sativus]
Length = 263
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | | 263
0 50 100 150 200 250
Plus Strand HSPs:
Score = 327 (115.1 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 75/135 (55%), Positives = 94/135 (69%), Frame = +2
Query: 47 MASTQCFLHHHALTTPARSPS--QRIMVSTKPNQLVCKAQKQE---DIDVSPISRRLALT 211
MAST CFLHHHALT ARS S ++ + P LVC+AQKQ+ + + +SRRLALT
Sbjct: 1 MASTSCFLHHHALTAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLALT 60
Query: 212 VLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAXKLN 391
VLIGAAA+GSKV PADA+ +G+ +FGKPK++TD+LPY+GDGF+LSIPSK +
Sbjct: 61 VLIGAAALGSKVSPADAA-YGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKER-E 118
Query: 392 SPVPVCLXMRXNXDSPPN 445
P V L N DS N
Sbjct: 119 FPGQV-LRYEDNFDSNSN 135
>gi|100363|pir||S22237 photosystem II oxygen-evolving complex protein 2
precursor (clone TNM3) - common tobacco (fragment)
>gi|20003|emb|CAA44291.1| (X62425) 23-dDa polypeptide of
Photosystem II oxygen-evolving complex [Nicotiana tabacum]
Length = 166
Frame 2 hits (HSPs): __________________________________________
Annotated Domains: _________________________
__________________________________________________
Database sequence: | | | | | 166
0 50 100 150
__________________
Annotated Domains:
Entrez domain: transit peptide (chloroplast) 1..82
__________________
Plus Strand HSPs:
Score = 321 (113.0 bits), Expect = 7.1e-28, P = 7.1e-28
Identities = 78/140 (55%), Positives = 97/140 (69%), Frame = +2
Query: 47 MASTQCFLHHHALTTPA-RSPS----QRIMVSTKPNQLVCKAQKQ-----EDIDVSPISR 196
MASTQCFLH HAL++ A R+ S QR + S KPNQLVC+AQKQ +D + +SR
Sbjct: 1 MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSAQEDDGNSVAVSR 60
Query: 197 RLALTVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQ 376
RLALTVLIGAAAV SKV PADA+ +G+ +FGKPK +TDFL YNGDGF+L +P+K
Sbjct: 61 RLALTVLIGAAAVVSKVSPADAA-YGEAANVFGKPKQNTDFLAYNGDGFKLQVPAK-WNP 118
Query: 377 AXKLNSPVPVCLXMRXNXDSPPN 445
+ ++ P V L N DS N
Sbjct: 119 SKEVEFPGQV-LRYEDNFDSTSN 140
>gi|100362|pir||S20935 photosystem II oxygen-evolving complex protein 2
precursor (clone T23-5B) - common tobacco (fragment)
>gi|1345550|emb|CAA44292.1| (X62426) 23-kDa ploypeptide of
photosystem II oxygen-evolving complex [Nicotiana tabacum]
Length = 266
Frame 2 hits (HSPs): __________________________
Annotated Domains: _______________
__________________________________________________
Database sequence: | | | | | | | 266
0 50 100 150 200 250
__________________
Annotated Domains:
Entrez domain: transit peptide (chloroplast) (f 1..80
__________________
Plus Strand HSPs:
Score = 321 (113.0 bits), Expect = 7.1e-28, P = 7.1e-28
Identities = 77/138 (55%), Positives = 96/138 (69%), Frame = +2
Query: 53 STQCFLHHHALTTPA-RSPS----QRIMVSTKPNQLVCKAQKQ-----EDIDVSPISRRL 202
STQCFLH HAL++ A R+ S QR + S KPNQLVC+AQKQ +D + +SRRL
Sbjct: 1 STQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSAQEDDGNSVAVSRRL 60
Query: 203 ALTVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAX 382
ALTVLIGAAAVGSKV PADA+ +G+ +FGKPK +TDFL YNGDGF+L +P+K +
Sbjct: 61 ALTVLIGAAAVGSKVSPADAA-YGEAANVFGKPKQNTDFLAYNGDGFKLQVPAK-WNPSK 118
Query: 383 KLNSPVPVCLXMRXNXDSPPN 445
++ P V L N DS N
Sbjct: 119 EVEFPGQV-LRYEDNFDSTSN 138
>gi|11133884|sp|O49080|PSBP_FRIAG OXYGEN-EVOLVING ENHANCER PROTEIN 2,
CHLOROPLAST PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING
SYSTEM OF PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID
MEMBRANE PROTEIN) >gi|2921508|gb|AAC04809.1| (AF037458) photosystem
II oxygen evolving complex protein 2 precursor [Fritillaria
agrestis]
Length = 264
Frame 2 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | | | 264
0 50 100 150 200 250
Plus Strand HSPs:
Score = 316 (111.2 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 64/111 (57%), Positives = 86/111 (77%), Frame = +2
Query: 47 MASTQCFLHHHALTTPA---RSPSQRIMVSTKPNQLVCKAQKQEDIDVSP---ISRRLAL 208
MAS+ CFL HHA +TPA R+PS R++ + KP+QL+C+AQK D D + +SRRLAL
Sbjct: 1 MASSACFLLHHAPSTPATTSRTPSHRLVPTIKPSQLICRAQKSSDTDENSSTAVSRRLAL 60
Query: 209 TVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSK 364
T+LIG+AAVG+K+ PA+A+ +G+ +FGK KT+TDFLPY GDGF L IP+K
Sbjct: 61 TILIGSAAVGTKIAPANAA-YGEAANVFGKAKTNTDFLPYTGDGFNLLIPAK 111
>gi|7443217|pir||JC5271 oxygen-evolving complex 23K protein - Arabidopsis
thaliana >gi|1769905|emb|CAA66785.1| (X98108) 23 kDa polypeptide of
oxygen-evolving comlex (OEC) [Arabidopsis thaliana]
>gi|6692695|gb|AAF24829.1|AC007592_22 (AC007592) F12K11.3
[Arabidopsis thaliana]
Length = 263
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | | 263
0 50 100 150 200 250
Plus Strand HSPs:
Score = 312 (109.8 bits), Expect = 6.4e-27, P = 6.4e-27
Identities = 69/135 (51%), Positives = 93/135 (68%), Frame = +2
Query: 47 MASTQCFLHHHALTTPAR-----SPSQRIMVSTKPNQLVCKAQKQEDIDVSPISRRLALT 211
MA + CFLH AL + A S SQR + +KP Q++CKAQ+ + D S +SRRLALT
Sbjct: 1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQSHEDDNSAVSRRLALT 60
Query: 212 VLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAXKLN 391
+L+GAAAVGSKV PADA+ +G+ +FGKPKT+TDFLPYNGDGF++ +P+K + ++
Sbjct: 61 LLVGAAAVGSKVSPADAA-YGEAANVFGKPKTNTDFLPYNGDGFKVQVPAK-WNPSKEIE 118
Query: 392 SPVPVCLXMRXNXDSPPN 445
P V L N D+ N
Sbjct: 119 YPGQV-LRFEDNFDATSN 135
>gi|19898|emb|CAA41712.1| (X58909) photosystem II 23 kDa polypeptide [Nicotiana
tabacum]
Length = 261
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | | 261
0 50 100 150 200 250
Plus Strand HSPs:
Score = 290 (102.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 71/133 (53%), Positives = 91/133 (68%), Frame = +2
Query: 68 LHHHALTTPA-RSPS----QRIMVSTKPNQLVCKAQKQ-----EDIDVSPISRRLALTVL 217
LH HAL++ A R+ S QR + S KPNQLVC+AQKQ +D + +SRRLALTVL
Sbjct: 1 LHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSRRLALTVL 60
Query: 218 IGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAXKLNSP 397
IGAAA+GSKV PADA+ +G+ +FGKPK +TDFL YNGDGF+L +P+K + ++ P
Sbjct: 61 IGAAAIGSKVSPADAA-YGEAANVFGKPKENTDFLAYNGDGFKLQVPAK-WNPSKEVEFP 118
Query: 398 VPVCLXMRXNXDSPPN 445
V L N DS N
Sbjct: 119 GQV-LRYEDNFDSTSN 133
>gi|131391|sp|P11594|PSBP_SINAL OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF
PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID MEMBRANE
PROTEIN) >gi|81722|pir||S10016 photosystem II oxygen-evolving
complex protein 2 - white mustard >gi|21133|emb|CAA35081.1|
(X17213) oxygen-evolving complex of photosystem II [Sinapis alba]
Length = 260
Frame 2 hits (HSPs): __________________________
Annotated Domains: ____________________________________________
__________________________________________________
Database sequence: | | | | | | | 260
0 50 100 150 200 250
__________________
Annotated Domains:
PFAM PsbP: PsbP 58..260
PRODOM PD005326: PSBP(6) 33..90
PRODOM PD003904: PSBP(7) 92..258
__________________
Plus Strand HSPs:
Score = 278 (97.9 bits), Expect = 2.6e-23, P = 2.6e-23
Identities = 65/133 (48%), Positives = 88/133 (66%), Frame = +2
Query: 47 MASTQCFLHHHAL-TTPARS-PSQRIMVSTKPNQLVCKAQKQEDIDVSPISRRLALTVLI 220
MA + CFLH AL ++ ARS PS ++LVCKAQ+ + D S +SRRLALT+L+
Sbjct: 1 MAYSACFLHQSALASSTARSSPSSSSQRYVSISKLVCKAQQTHEEDNSTVSRRLALTLLV 60
Query: 221 GAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAXKLNSPV 400
GAAAVGSKV PADA+ +G+ +FGKPK +TDF Y+GDGFQ+ +P+K + ++ P
Sbjct: 61 GAAAVGSKVSPADAA-YGEAANVFGKPKKNTDFTAYSGDGFQVQVPAK-WNPSREVEYPG 118
Query: 401 PVCLXMRXNXDSPPN 445
V L N D+ N
Sbjct: 119 QV-LRYEDNFDATSN 132
>gi|11133887|sp|O49344|PSP2_ARATH OXYGEN-EVOLVING ENHANCER PROTEIN 2-2,
CHLOROPLAST PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING
SYSTEM OF PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID
MEMBRANE PROTEIN)
Length = 265
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | | 265
0 50 100 150 200 250
Plus Strand HSPs:
Score = 262 (92.2 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 61/137 (44%), Positives = 87/137 (63%), Frame = +2
Query: 47 MASTQCFLHHHALTTPA-RSPSQ-----RIMVSTKPNQLVCKAQKQEDIDVSPISRRLAL 208
MA + FLH AL + A RS S R + ++P LVC+AQ+ ++ + S + RRLAL
Sbjct: 1 MAYSPSFLHQSALASSAGRSSSSSSSSFRHVSLSRPVHLVCRAQQSQENNNSAVFRRLAL 60
Query: 209 TVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAXKL 388
T+L+GAAA+GSKV PA + +G+ +FGKPK +TDFLPY G+GF++ IPSK + ++
Sbjct: 61 TLLVGAAAIGSKVSPAPXAAYGEAANVFGKPKKNTDFLPYTGEGFKIQIPSK-WNPSKEI 119
Query: 389 NSPVPVCLXMRXNXDSPPN 445
P V L N D+ N
Sbjct: 120 EYPGQV-LRFEDNFDATSN 137
>gi|81723|pir||S03888 photosystem II oxygen-evolving complex protein 2
precursor - white mustard (fragment) >gi|829289|emb|CAA68801.1|
(Y07498) 23 kD subunit [Sinapis alba] >gi|226314|prf||1506342A O2
evolving complex 23kD protein [Sinapis alba]
Length = 248
Frame 2 hits (HSPs): ________________________
Annotated Domains: _____________
__________________________________________________
Database sequence: | | | | | | 248
0 50 100 150 200
__________________
Annotated Domains:
Entrez domain: transit peptide (chloroplast) (f 1..62
__________________
Plus Strand HSPs:
Score = 250 (88.0 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 57/122 (46%), Positives = 78/122 (63%), Frame = +2
Query: 80 ALTTPARSPSQRIMVSTKPNQLVCKAQKQEDIDVSPISRRLALTVLIGAAAVGSKVQPAD 259
A +T SPS ++LVCKAQ+ + D S +SRRLALT+L+GAAAVGSKV PAD
Sbjct: 2 ASSTARSSPSSSSQRYVSISKLVCKAQQTHEEDNSTVSRRLALTLLVGAAAVGSKVSPAD 61
Query: 260 ASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAXKLNSPVPVCLXMRXNXDSP 439
A+ +G+ +FGKPK +TDF Y+GDGFQ+ +P+K + ++ P V L N D+
Sbjct: 62 AA-YGEAANVFGKPKKNTDFTAYSGDGFQVQVPAK-WNPSREVEYPGQV-LRYEDNFDAT 118
Query: 440 PN 445
N
Sbjct: 119 SN 120
>gi|7443219|pir||T02873 probable photosystem II oxygen-evolving complex protein
2 precursor - rice >gi|4079798|gb|AAC98778.1| (AF052203) 23 kDa
polypeptide of photosystem II [Oryza sativa]
Length = 254
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | || 254
0 50 100 150 200 250
Plus Strand HSPs:
Score = 248 (87.3 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 59/106 (55%), Positives = 75/106 (70%), Frame = +2
Query: 47 MASTQCFLHHHALTTPAR--SPSQRIMVSTKPNQLVCKAQKQEDIDVSPISRRLALTVLI 220
MAST CFLH AR SPS +T+ + LVC+AQKQ+D DVS RR AL +L
Sbjct: 1 MASTSCFLHQSTARVAARVASPSP----ATRTHLLVCRAQKQDDADVS---RRAALALLA 53
Query: 221 GA-AAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSK 364
GA AAVG KV PA A+ +G+ +FGKPKT+T+F+ Y+G+GF+L IPSK
Sbjct: 54 GATAAVGVKVAPA-AAAYGEAANVFGKPKTNTEFIAYSGEGFKLLIPSK 101
>gi|7443218|pir||T02078 photosystem II oxygen-evolving complex protein - rice
>gi|2570499|gb|AAB82135.1| (AF022732) 23kDa polypeptide of
photosystem II [Oryza sativa]
Length = 254
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | || 254
0 50 100 150 200 250
Plus Strand HSPs:
Score = 238 (83.8 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 56/106 (52%), Positives = 72/106 (67%), Frame = +2
Query: 47 MASTQCFLHHHALTTPAR--SPSQRIMVSTKPNQLVCKAQKQEDIDVSPISRRLALTVLI 220
MAST CFLH AR SPS +T+ + LVC+AQKQ+D D SRR AL +L
Sbjct: 1 MASTSCFLHQSTARVAARVASPSP----ATRTHLLVCRAQKQDDAD---FSRRAALALLA 53
Query: 221 GA-AAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSK 364
G AAVG V P A+ +G+ +FGKPKT+T+F+PY+G+GF+L IPSK
Sbjct: 54 GTTAAVGVNVAPP-AAAYGEAANVFGKPKTNTEFIPYSGEGFKLLIPSK 101
>gi|11134051|sp|Q40407|PSBP_NARPS OXYGEN-EVOLVING ENHANCER PROTEIN 2,
CHLOROPLAST PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING
SYSTEM OF PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID
MEMBRANE PROTEIN) >gi|1086096|pir||S54136 OEC protein 23K -
Narcissus pseudonarcissus >gi|2147750|pir||S63532 NAD(P)H-quinone
oxidoreductase, 23K, precursor - Narcissus pseudonarcissus
>gi|780273|emb|CAA55393.1| (X78816) OEC 23kd protein [Narcissus
pseudonarcissus]
Length = 265
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | | 265
0 50 100 150 200 250
Plus Strand HSPs:
Score = 227 (79.9 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 62/137 (45%), Positives = 83/137 (60%), Frame = +2
Query: 47 MASTQCFLHHHALTTPARSPSQRIMVSTKPN--QLVCKAQKQE-DIDVSP-----ISRRL 202
MAST CFLHHHA +PA S R +T + Q A+ Q + D + +SRRL
Sbjct: 1 MASTACFLHHHA-PSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDALLSRRL 59
Query: 203 ALTVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAX 382
ALT+LIG AA+GS+V ADA+ +G+ +FGKPKT+TDF GDGF++ IPSK +
Sbjct: 60 ALTILIGGAALGSRVSAADAA-YGESANVFGKPKTNTDFQTVTGDGFKILIPSK-WNPSK 117
Query: 383 KLNSPVPVCLXMRXNXDSPPN 445
++ P V L N D+ N
Sbjct: 118 EVEFPGQV-LRYEDNFDTTSN 137
>gi|2880056|gb|AAC02750.1| (AC002340) putative photosystem II oxygen-evolving
complex 23K protein [Arabidopsis thaliana]
Length = 257
Frame 2 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | | | | 257
0 50 100 150 200 250
Plus Strand HSPs:
Score = 220 (77.4 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 58/133 (43%), Positives = 81/133 (60%), Frame = +2
Query: 47 MASTQCFLHHHALTTPA-RSPSQ-----RIMVSTKPNQLVCKAQKQEDIDVSPISRRLAL 208
MA + FLH AL + A RS S R + ++P LVC+AQ+ ++ + S + RRLAL
Sbjct: 1 MAYSPSFLHQSALASSAGRSSSSSSSSFRHVSLSRPVHLVCRAQQSQENNNSAVFRRLAL 60
Query: 209 TVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAXKL 388
T+L+GAAA+GSKV PA P + PK +TDFLPY G+GF++ IPSK + ++
Sbjct: 61 TLLVGAAAIGSKVSPA--------PPMVKPPKKNTDFLPYTGEGFKIQIPSK-WNPSKEI 111
Query: 389 NSPVPVCLXMRXNXDSPPN 445
P V L N D+ N
Sbjct: 112 EYPGQV-LRFEDNFDATSN 129
>gi|11134091|sp|Q96334|PSBP_BRAJU OXYGEN-EVOLVING ENHANCER PROTEIN 2,
CHLOROPLAST PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING
SYSTEM OF PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID
MEMBRANE PROTEIN) >gi|1620920|emb|CAA70099.1| (Y08886) 23kD protein
of oxygen evolving system of photosystem II [Brassica juncea]
Length = 217
Frame 2 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | | 217
0 50 100 150 200
Plus Strand HSPs:
Score = 217 (76.4 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 49/93 (52%), Positives = 64/93 (68%), Frame = +2
Query: 167 EDIDVSPISRRLALTVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQ 346
ED D S +SRRLALT+L+GAAAVGSKV PADA+ +G+ +FGKPKT+TDF NGDGFQ
Sbjct: 1 ED-DTSTVSRRLALTLLVGAAAVGSKVSPADAA-YGEAANVFGKPKTNTDFTAINGDGFQ 58
Query: 347 LSIPSKVGTQAXKLNSPVPVCLXMRXNXDSPPN 445
+ +P+K + ++ P V L N D+ N
Sbjct: 59 VQVPAK-WNPSREVEYPGQV-LRYEDNFDATSN 89
>gi|131394|sp|Q00434|PSBP_WHEAT OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF
PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID MEMBRANE
PROTEIN) >gi|100797|pir||S22763 photosystem II oxygen-evolving
complex protein 2 precursor - wheat >gi|21837|emb|CAA40669.1|
(X57407) 23kDa oxygen evolving protein of photosystem II [Triticum
aestivum]
Length = 258
Frame 2 hits (HSPs): _____________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 258
0 50 100 150 200 250
__________________
Annotated Domains:
PFAM PsbP: PsbP 57..258
PRODOM PD104319: PSBP_WHEAT 1..30
PRODOM PD005326: PSBP(6) 32..89
PRODOM PD003904: PSBP(7) 91..256
__________________
Plus Strand HSPs:
Score = 209 (73.6 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 51/106 (48%), Positives = 71/106 (66%), Frame = +2
Query: 47 MASTQCFLHHHALTTPARSPSQRIMVSTKPNQL-VCKAQKQEDI--DVSPI-SRRLALTV 214
MAST CFLH +T + S R + QL VCKAQK ++ D + + SRR AL++
Sbjct: 1 MASTSCFLHQ---STARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAALSL 57
Query: 215 LIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSK 364
L GAAA+ KV PA A+ +G+ +FGK K +TDF+ Y+G+GF+L IP+K
Sbjct: 58 LAGAAAIAVKVSPA-AAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAK 106
>gi|625545|pir||S44030 photosystem II oxygen-evolving complex protein 2 -
common tobacco (fragment) >gi|396261|emb|CAA45700.1| (X64348) 23
kDa polypeptide of water-oxidizing complex of photosystem II
[Nicotiana tabacum]
Length = 205
Frame 2 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | | 205
0 50 100 150 200
Plus Strand HSPs:
Score = 179 (63.0 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 41/80 (51%), Positives = 53/80 (66%), Frame = +2
Query: 206 LTVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSKVGTQAXK 385
LT+LIG+AA+GSKV PADA+ +G+ +FGK KT+TDF YNGDGF+L IPSK +
Sbjct: 1 LTLLIGSAAIGSKVSPADAA-YGEAANVFGKAKTNTDFQTYNGDGFKLQIPSKWNPNK-E 58
Query: 386 LNSPVPVCLXMRXNXDSPPN 445
+ P V L N D+ N
Sbjct: 59 VEYPGQV-LRFEDNFDATSN 77
>gi|7443220|pir||T03873 photosystem II oxygen-evolving complex protein 2
precursor - rice >gi|1398999|dbj|BAA08564.1| (D49713) 23 kDa
polypeptide of photosystem II [Oryza sativa]
Length = 252
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | || 252
0 50 100 150 200 250
Plus Strand HSPs:
Score = 174 (61.3 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 49/106 (46%), Positives = 67/106 (63%), Frame = +2
Query: 47 MASTQCFLHHHALTTPARSPSQRIMV--STKPNQLVCKAQKQEDIDVSPISRRLALTVLI 220
MAST CFLH + AR ++R+ V T P + + + + P R LAL L
Sbjct: 1 MASTSCFLHQ----STARVAARRLPVPGDTDPPPRLPRPEAGRRRRLPP--RALAL--LA 52
Query: 221 GA-AAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSK 364
GA AAVG KV PA A+ +G+ +FGKPKT+T+F+ Y+G+GF+L IPSK
Sbjct: 53 GATAAVGVKVAPA-AAAYGEAANVFGKPKTNTEFIAYSGEGFKLLIPSK 100
>gi|131389|sp|P11471|PSBP_CHLRE OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) >gi|81253|pir||S00413 photosystem II
oxygen-evolving complex protein 2 precursor - Chlamydomonas
reinhardtii >gi|167428|gb|AAA33088.1| (M15187) oxygen-evolving
enhancer protein 2 [Chlamydomonas reinhardtii]
Length = 245
Frame 2 hits (HSPs): __________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 245
0 50 100 150 200
__________________
Annotated Domains:
DOMO DM07153: PHOTOSYSTEMIIOXYGEN-EVOLVINGCOM 1..244
PFAM PsbP: PsbP 42..245
PRODOM PD104326: PSBP_CHLRE 1..73
PRODOM PD003904: PSBP(7) 75..243
__________________
Plus Strand HSPs:
Score = 121 (42.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 35/88 (39%), Positives = 46/88 (52%), Frame = +2
Query: 182 SPISRRLALTVLIGAAAVGSKVQPADASLWGKLPMLFGKPKTDTDFLPYNGDGFQLSIPS 361
S +SRR AL GAAA+ S PA+A+ +G +FGK + F+PY GDGF L +P+
Sbjct: 32 SDVSRRAALAGFAGAAALVSS-SPANAA-YGDSANVFGKVTNKSGFVPYAGDGFALLLPA 89
Query: 362 KVGTQAXKLNSPVPVCLXMRXNXDSPPN 445
K K N V L N D+ N
Sbjct: 90 K--WNPSKENDFPGVILRYEDNFDAVNN 115
>gi|81935|pir||S03271 photosystem II oxygen-evolving complex protein 2 - garden
pea (fragment)
Length = 36
Frame 2 hits (HSPs): ____________________________________________
__________________________________________________
Database sequence: | | | 36
0 20
Plus Strand HSPs:
Score = 114 (40.1 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 19/32 (59%), Positives = 27/32 (84%), Frame = +2
Query: 269 WGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSK 364
+G+ +FGK KT+TD+LPYNGDGF+L +P+K
Sbjct: 2 YGEAANVFGKAKTNTDYLPYNGDGFKLLVPAK 33
>gi|8131593|dbj|BAA96364.1| (AB043961) oxygen evolving enhancer protein 2
[Bruguiera gymnorhiza]
Length = 160
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | 160
0 50 100 150
Plus Strand HSPs:
Score = 110 (38.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 25/48 (52%), Positives = 31/48 (64%), Frame = +2
Query: 293 GKPKTDTDFLPYNGDGFQLSIPSKVGTQAXKLNSPVPVCLXMRXNXDS 436
GKPK +TDFLPY+GDGF+L IPSK + ++ P V L N DS
Sbjct: 1 GKPKENTDFLPYDGDGFKLQIPSK-WNPSKEVEFPGQV-LRYEDNFDS 46
>gi|82498|pir||PS0187 photosystem II oxygen-evolving complex protein 2 - rice
(fragment)
Length = 37
Frame 2 hits (HSPs): ___________________________________________
__________________________________________________
Database sequence: | | | 37
0 20
Plus Strand HSPs:
Score = 102 (35.9 bits), Expect = 0.00011, P = 0.00011
Identities = 17/32 (53%), Positives = 26/32 (81%), Frame = +2
Query: 269 WGKLPMLFGKPKTDTDFLPYNGDGFQLSIPSK 364
+G+ +FGKPKT+T+F+ Y+G+GF+L IP K
Sbjct: 2 YGEAANVFGKPKTNTEFIAYSGEGFKLLIPKK 33
>gi|280369|pir||B60484 photosystem II oxygen-evolving complex protein 1 -
western white pine (fragment)
Length = 35
Frame 2 hits (HSPs): ___________________________________________
__________________________________________________
Database sequence: | | | 35
0 20
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 0.0057, P = 0.0057
Identities = 15/30 (50%), Positives = 21/30 (70%), Frame = +2
Query: 269 WGKLPMLFGKPKTDTDFLPYNGDGFQLSIP 358
+G+ +FG PK +TDF+ Y+G GF L IP
Sbjct: 2 YGEAANVFGAPKKNTDFITYSGPGFTLQIP 31
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.91
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.345 0.151 0.523
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.317 0.131 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.348 0.152 0.624
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.348 0.152 0.598
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.345 0.150 0.533
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.327 0.140 0.477
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 149 144 10. 73 3 12 22 0.12 33
30 0.11 36
+2 0 149 145 10. 74 3 12 22 0.12 33
30 0.11 36
+1 0 149 144 10. 73 3 12 22 0.12 33
30 0.11 36
-1 0 149 144 10. 73 3 12 22 0.12 33
30 0.11 36
-2 0 149 144 10. 73 3 12 22 0.12 33
30 0.11 36
-3 0 149 146 10. 74 3 12 22 0.12 33
30 0.11 36
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 31
No. of states in DFA: 591 (58 KB)
Total size of DFA: 203 KB (256 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 165.51u 0.98s 166.49t Elapsed: 00:00:28
Total cpu time: 165.55u 1.00s 166.55t Elapsed: 00:00:28
Start: Mon Oct 1 22:41:17 2001 End: Mon Oct 1 22:41:45 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000