BLASTP 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= SPy_0800 putative pore-forming peptide
(162 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,515,104 sequences; 2,222,278,849 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_269016.1| putative pore-forming peptide [Streptococc... 329 4e-89
ref|NP_664338.1| putative pore-forming peptide [Streptococc... 327 1e-88
ref|ZP_00366453.1| hypothetical protein SpyoM01000270 [Stre... 327 1e-88
ref|YP_280063.1| pore forming protein [Streptococcus pyogen... 327 2e-88
ref|YP_001128734.1| hypothetical protein SpyM51191 [Strepto... 326 3e-88
ref|NP_688386.1| hypothetical protein SAG1388 [Streptococcu... 234 2e-60
ref|NP_735895.1| hypothetical protein gbs1458 [Streptococcu... 234 2e-60
ref|ZP_00782861.1| conserved hypothetical protein [Streptoc... 231 1e-59
ref|NP_721119.1| hypothetical protein SMU.692 [Streptococcu... 222 6e-57
ref|ZP_02920799.1| hypothetical protein STRINF_01682 [Strep... 221 1e-56
ref|ZP_00779955.1| conserved hypothetical protein [Streptoc... 202 5e-51
ref|YP_139591.1| pore-forming peptide, putative [Streptococ... 197 1e-49
dbj|BAF76792.1| hypothetical protein [Streptococcus sobrinus] 189 4e-47
ref|YP_001035448.1| hypothetical protein SSA_1504 [Streptoc... 176 5e-43
ref|YP_001450317.1| hypothetical protein SGO_1028 [Streptoc... 169 8e-41
ref|YP_001198640.1| hypothetical protein SSU05_1274 [Strept... 155 7e-37
ref|ZP_00875220.1| conserved hypothetical protein [Streptoc... 153 3e-36
ref|ZP_00788931.1| Unknown [Streptococcus agalactiae CJB111... 102 1e-20
ref|YP_001200846.1| hypothetical protein SSU98_1288 [Strept... 88 2e-16
ref|ZP_00787858.1| Unknown [Streptococcus agalactiae CJB111... 83 7e-15
gb|AAC36851.1| pore-forming peptide 53 5e-06
ref|NP_815432.1| ebsA protein [Enterococcus faecalis V583] ... 52 1e-05
ref|ZP_02185503.1| hypothetical protein CAT7_11725 [Carnoba... 45 0.002
ref|NP_523724.2| Multi drug resistance 49 CG3879-PA [Drosop... 37 0.57
sp|Q00449|MDR49_DROME Multidrug resistance protein homolog ... 37 0.57
ref|YP_001438011.1| hypothetical protein ESA_01921 [Enterob... 33 4.6
ref|ZP_01859332.1| hypothetical protein BSG1_00325 [Bacillu... 33 5.1
ref|ZP_01274854.1| hypothetical protein Lreu23DRAFT_0408 [L... 33 6.5
ref|NP_986525.1| AGL142Cp [Ashbya gossypii ATCC 10895] >gi|... 33 7.3
gb|AAC33146.1| rRNA N-6-methyltransferase [Staphylococcus s... 32 9.4
>ref|NP_269016.1| putative pore-forming peptide [Streptococcus pyogenes M1 GAS]
ref|NP_607017.1| putative pore-forming peptide [Streptococcus pyogenes MGAS8232]
ref|YP_059950.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS10394]
ref|YP_281978.1| pore forming protein [Streptococcus pyogenes MGAS5005]
ref|YP_596402.1| pore forming protein [Streptococcus pyogenes MGAS9429]
ref|YP_598279.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS10270]
ref|YP_600276.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS2096]
ref|YP_602196.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS10750]
gb|AAK33737.1| putative pore-forming peptide [Streptococcus pyogenes M1 GAS]
gb|AAL97516.1| putative pore-forming peptide [Streptococcus pyogenes MGAS8232]
gb|AAT86767.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS10394]
gb|AAZ51233.1| pore forming protein [Streptococcus pyogenes MGAS5005]
gb|ABF31858.1| pore forming protein [Streptococcus pyogenes MGAS9429]
gb|ABF33735.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS10270]
gb|ABF35732.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS2096]
gb|ABF37652.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS10750]
Length = 162
Score = 329 bits (843), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 162/162 (100%), Positives = 162/162 (100%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI
Sbjct: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDKSYLFYMRKWPK 120
GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDKSYLFYMRKWPK
Sbjct: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDKSYLFYMRKWPK 120
Query: 121 KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG
Sbjct: 121 KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
>ref|NP_664338.1| putative pore-forming peptide [Streptococcus pyogenes MGAS315]
ref|NP_802582.1| putative pore-forming peptide [Streptococcus pyogenes SSI-1]
gb|AAM79141.1| putative pore-forming peptide [Streptococcus pyogenes MGAS315]
dbj|BAC64415.1| putative pore-forming peptide [Streptococcus pyogenes SSI-1]
Length = 162
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/162 (99%), Positives = 162/162 (100%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI
Sbjct: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDKSYLFYMRKWPK 120
GLHRYFIIENNGILRIVSF+LFGPRKLLISTITKIEVTKSTLCLHVEDKSYLFYMRKWPK
Sbjct: 61 GLHRYFIIENNGILRIVSFELFGPRKLLISTITKIEVTKSTLCLHVEDKSYLFYMRKWPK 120
Query: 121 KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG
Sbjct: 121 KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
>ref|ZP_00366453.1| hypothetical protein SpyoM01000270 [Streptococcus pyogenes M49 591]
Length = 162
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/162 (99%), Positives = 161/162 (99%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI
Sbjct: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDKSYLFYMRKWPK 120
GLHRYFIIENNGILRIVSFKLFGPRKLLIS ITKIEVTKSTLCLHVEDKSYLFYMRKWPK
Sbjct: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISAITKIEVTKSTLCLHVEDKSYLFYMRKWPK 120
Query: 121 KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG
Sbjct: 121 KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
>ref|YP_280063.1| pore forming protein [Streptococcus pyogenes MGAS6180]
gb|AAX71708.1| pore forming protein [Streptococcus pyogenes MGAS6180]
Length = 162
Score = 327 bits (837), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 161/162 (99%), Positives = 161/162 (99%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI
Sbjct: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDKSYLFYMRKWPK 120
GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLH EDKSYLFYMRKWPK
Sbjct: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHFEDKSYLFYMRKWPK 120
Query: 121 KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG
Sbjct: 121 KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
>ref|YP_001128734.1| hypothetical protein SpyM51191 [Streptococcus pyogenes str.
Manfredo]
emb|CAM30517.1| putative membrane protein [Streptococcus pyogenes str. Manfredo]
Length = 162
Score = 326 bits (835), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/162 (99%), Positives = 161/162 (99%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI
Sbjct: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDKSYLFYMRKWPK 120
GLHRYFIIENNGILRIVSFKLFGP KLLISTITKIEVTKSTLCLHVEDKSYLFYMRKWPK
Sbjct: 61 GLHRYFIIENNGILRIVSFKLFGPCKLLISTITKIEVTKSTLCLHVEDKSYLFYMRKWPK 120
Query: 121 KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG
Sbjct: 121 KYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
>ref|NP_688386.1| hypothetical protein SAG1388 [Streptococcus agalactiae 2603V/R]
gb|AAN00259.1|AE014255_17 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
Length = 163
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/163 (70%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIKLFGKIRYHWQPELSW+IIYWSIA APIF+GLSLLYERTEIPS+VF+LFAIF VLVGI
Sbjct: 1 MIKLFGKIRYHWQPELSWAIIYWSIAIAPIFIGLSLLYERTEIPSQVFVLFAIFIVLVGI 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDK-SYLFYMRKWP 119
G HRYF+IE +G LRIVSF K I I KIEVTKS++ + + +FYMRKWP
Sbjct: 61 GFHRYFVIEEDGYLRIVSFNFLRRTKFPIEDIAKIEVTKSSVTIKFNNNHERIFYMRKWP 120
Query: 120 KKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
KKYFLDALA+ P F+GEV L DN IK+DYFE Y++DKKALT+
Sbjct: 121 KKYFLDALAIEPTFKGEVELLDNLIKMDYFECYRYDKKALTKS 163
>ref|NP_735895.1| hypothetical protein gbs1458 [Streptococcus agalactiae NEM316]
ref|YP_330029.1| hypothetical protein SAK_1421 [Streptococcus agalactiae A909]
ref|ZP_00785371.1| Unknown [Streptococcus agalactiae COH1]
ref|ZP_00791120.1| Unknown [Streptococcus agalactiae 515]
emb|CAD47117.1| Unknown [Streptococcus agalactiae NEM316]
gb|ABA44668.1| conserved hypothetical protein [Streptococcus agalactiae A909]
gb|EAO70140.1| Unknown [Streptococcus agalactiae 515]
gb|EAO75890.1| Unknown [Streptococcus agalactiae COH1]
Length = 163
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/163 (70%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIKLFGKIRYHWQPELSW+IIYWSIA APIF+GLSLLYERTEIPS+VF+LFAIF VLVGI
Sbjct: 1 MIKLFGKIRYHWQPELSWAIIYWSIAIAPIFIGLSLLYERTEIPSQVFVLFAIFIVLVGI 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDK-SYLFYMRKWP 119
G HRYF+IE +G LRIVSF K I I KIEVTKS++ + + +FYMRKWP
Sbjct: 61 GFHRYFVIEEDGYLRIVSFNFLRRSKFPIEDIAKIEVTKSSVTIKFNNNHERIFYMRKWP 120
Query: 120 KKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
KKYFLDALA+ P F+GEV L DN IK+DYFE Y++DKKALT+
Sbjct: 121 KKYFLDALAIEPKFKGEVELLDNLIKMDYFECYRYDKKALTKS 163
>ref|ZP_00782861.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
gb|EAO78417.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
Length = 163
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/163 (69%), Positives = 131/163 (80%), Gaps = 1/163 (0%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIKLFGKIRYHW PELSW+IIYWSIA APIF+GLSLLYERTEIPS+VF+LFAIF VLVGI
Sbjct: 1 MIKLFGKIRYHWXPELSWAIIYWSIAIAPIFIGLSLLYERTEIPSQVFVLFAIFIVLVGI 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDK-SYLFYMRKWP 119
G HRYF+IE +G LRIVSF K I I KIEVTKS++ + + +FYMRKWP
Sbjct: 61 GFHRYFVIEEDGYLRIVSFNFLRRSKFPIEDIAKIEVTKSSVTIKFNNNHERIFYMRKWP 120
Query: 120 KKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
KKYFLDALA+ P F+GEV L DN IK+DYFE Y++DKKALT+
Sbjct: 121 KKYFLDALAIEPTFKGEVELLDNLIKMDYFECYRYDKKALTKS 163
>ref|NP_721119.1| hypothetical protein SMU.692 [Streptococcus mutans UA159]
gb|AAN58425.1|AE014913_2 hypothetical protein SMU_692 [Streptococcus mutans UA159]
dbj|BAD97690.1| hypothetical protein [Streptococcus mutans]
Length = 161
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 109/160 (68%), Positives = 127/160 (79%), Gaps = 1/160 (0%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIK+FGK+RYHWQPELSW IIYWSI PIF+ LSLLYE+T IP FILF F VLVG+
Sbjct: 1 MIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVE-DKSYLFYMRKWP 119
G HRYF+IENNGILR+VS +F P K+ I+ I K+EVTKST+ L V+ K LFYMRKWP
Sbjct: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
Query: 120 KKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKAL 159
KKYFLDALA++P F+GEV L DNFI LDYFE Y+ +KK L
Sbjct: 121 KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKKPL 160
>ref|ZP_02920799.1| hypothetical protein STRINF_01682 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gb|EDT46678.1| hypothetical protein STRINF_01682 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 163
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/162 (65%), Positives = 133/162 (82%), Gaps = 1/162 (0%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIK+FGKIRYHWQPELSWSIIYWSIA P+F+GLSLL+ERT+IPS+ F+LF+ F VLVG+
Sbjct: 1 MIKIFGKIRYHWQPELSWSIIYWSIAMVPMFIGLSLLFERTKIPSQFFVLFSAFIVLVGL 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDKS-YLFYMRKWP 119
G HRYF+IE +G LRIVS F ++ I+ I KIEV +S L L +++++ +FYMRKWP
Sbjct: 61 GFHRYFVIEEDGKLRIVSLNPFKKSRVAIAQIEKIEVNRSGLVLKIKNQTDRIFYMRKWP 120
Query: 120 KKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKALTR 161
KKYFLDALAV+P F+G V L+DNFIKLDYFE Y+ +KKA T+
Sbjct: 121 KKYFLDALAVHPDFRGTVELTDNFIKLDYFEAYKSNKKAPTK 162
>ref|ZP_00779955.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
gb|EAO63469.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
Length = 142
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/142 (71%), Positives = 114/142 (80%), Gaps = 1/142 (0%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIKLFGKIRYHWQPELSW+IIYWSIA APIF+GLSLLYERTEIPS+VF+LFAIF VLVGI
Sbjct: 1 MIKLFGKIRYHWQPELSWAIIYWSIAIAPIFIGLSLLYERTEIPSQVFVLFAIFIVLVGI 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDK-SYLFYMRKWP 119
G HRYF+IE +G LRIVSF K I I KIEVTKS++ + + +FYMRKWP
Sbjct: 61 GFHRYFVIEEDGYLRIVSFNFLRRTKFPIEDIAKIEVTKSSVTIKFNNNHERIFYMRKWP 120
Query: 120 KKYFLDALAVNPYFQGEVILSD 141
KKYFLDALA+ P F+GEV L D
Sbjct: 121 KKYFLDALAIEPTFKGEVELLD 142
>ref|YP_139591.1| pore-forming peptide, putative [Streptococcus thermophilus LMG
18311]
ref|YP_141501.1| pore-forming peptide, putative [Streptococcus thermophilus
CNRZ1066]
ref|YP_820483.1| hypothetical protein STER_1093 [Streptococcus thermophilus LMD-9]
gb|AAV60776.1| pore-forming peptide, putative [Streptococcus thermophilus LMG
18311]
gb|AAV62686.1| pore-forming peptide, putative [Streptococcus thermophilus
CNRZ1066]
gb|ABJ66287.1| Uncharacterized conserved protein [Streptococcus thermophilus
LMD-9]
Length = 166
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/160 (61%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIK+FGK RYHWQPELSW IIYWS+A PIF+ LL+E +PS + +LF IF L G+
Sbjct: 1 MIKIFGKYRYHWQPELSWLIIYWSLAITPIFIAGVLLFELYSVPSHILMLFTIFVALFGL 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVED-KSYLFYMRKWP 119
G HRYFIIE+ GILRIVSF +F PRK+ IS I K+EV K+ LCL ++ K FYMRKWP
Sbjct: 61 GFHRYFIIEDYGILRIVSFNIFKPRKVQISDIEKVEVIKTGLCLIFKNGKKRQFYMRKWP 120
Query: 120 KKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKAL 159
KKYFLDALA++P F+GEV L D+ DYF Y+ KKAL
Sbjct: 121 KKYFLDALALHPNFKGEVELMDHMTNFDYFAFYEEPKKAL 160
>dbj|BAF76792.1| hypothetical protein [Streptococcus sobrinus]
Length = 167
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 116/158 (73%), Gaps = 1/158 (0%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIK+FGK+RYHWQPELSWSIIYWSI F PIF+ +SL E+ +P AIF + VG+
Sbjct: 1 MIKIFGKVRYHWQPELSWSIIYWSITFIPIFLAMSLYREQVSVPWVGLTFIAIFLIFVGL 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCL-HVEDKSYLFYMRKWP 119
G HRYFI + L I+SF +F P K+ I+TI ++EVTKSTL L KS LFYMRKWP
Sbjct: 61 GFHRYFIFGEDNQLWIISFNVFKPLKVDIATIKRVEVTKSTLALVFTNGKSRLFYMRKWP 120
Query: 120 KKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKK 157
KKYFLD LA+NP F+GEV L D+ LDYF++YQ+DKK
Sbjct: 121 KKYFLDDLALNPAFKGEVELLDHSESLDYFKLYQNDKK 158
>ref|YP_001035448.1| hypothetical protein SSA_1504 [Streptococcus sanguinis SK36]
gb|ABN44898.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 162
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 117/154 (75%), Gaps = 2/154 (1%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIK+FGK+RYHWQP+++ IIYWS++ PIFVGL+L+YE + +P+ V F +F VL+G+
Sbjct: 1 MIKIFGKVRYHWQPDVAILIIYWSLSVIPIFVGLALMYESSRVPTLVLFSFFLFMVLLGM 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHV--EDKSYLFYMRKW 118
G+HRYF I ++G LRI++ F P K+ IS I K+EVTK+++ L+ + +S F MRKW
Sbjct: 61 GVHRYFTIYDDGTLRIITANPFTPIKVKISDIEKVEVTKTSITLYFKGQSRSRSFCMRKW 120
Query: 119 PKKYFLDALAVNPYFQGEVILSDNFIKLDYFEVY 152
PKKYF++ALA+N +F+GEV L DNF +DYFE Y
Sbjct: 121 PKKYFVNALALNEHFKGEVELVDNFTHIDYFEAY 154
>ref|YP_001450317.1| hypothetical protein SGO_1028 [Streptococcus gordonii str. Challis
substr. CH1]
gb|ABV09630.1| conserved hypothetical protein [Streptococcus gordonii str. Challis
substr. CH1]
Length = 162
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 119/162 (73%), Gaps = 4/162 (2%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
MIK+FG++RYHWQP+LS +IYWS++ PIF+GLSL+YE +++P+ V +F VL+G+
Sbjct: 1 MIKIFGQLRYHWQPDLSILVIYWSLSVIPIFIGLSLMYESSDVPTLVLFFLFLFMVLLGV 60
Query: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVE--DKSYLFYMRKW 118
G+HRYF I +NGILRI++ F P K+ ISTI K+ VTK+++ L+ + +K F MRKW
Sbjct: 61 GVHRYFTIYDNGILRIITANPFTPSKIDISTIRKVAVTKTSITLYFDGKEKGRTFCMRKW 120
Query: 119 PKKYFLDALAVNPYFQGEVILSDNFIKLDYFEVY--QHDKKA 158
PKKYF++ LA+N +F+GEV L DN +DYFE Y DK +
Sbjct: 121 PKKYFVNDLALNKHFKGEVELVDNLTHIDYFETYYANQDKHS 162
>ref|YP_001198640.1| hypothetical protein SSU05_1274 [Streptococcus suis 05ZYH33]
gb|ABP90240.1| hypothetical protein SSU05_1274 [Streptococcus suis 05ZYH33]
Length = 162
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/163 (53%), Positives = 120/163 (73%), Gaps = 10/163 (6%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILF-AIFAVLVG 59
MIK+FGKIRYHWQP+LSW+IIYWS+ F PIF+G++LL E+ ++ SR+FIL ++FAVLV
Sbjct: 1 MIKIFGKIRYHWQPDLSWAIIYWSLTFTPIFIGMALLLEKLQV-SRLFILLVSLFAVLVV 59
Query: 60 IGLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDKSY----LFYM 115
+GLHRYF I++ LRI S F +K+ I+TI KIEV S L + + K + ++YM
Sbjct: 60 LGLHRYFEIKDEH-LRIASANPFAVQKIEIATIEKIEV--SYLAIRIFAKEFPNGRMYYM 116
Query: 116 RKWPKKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKA 158
RKW KKYF++ LA++ F+G++ L D+ IK DYFE Y + KKA
Sbjct: 117 RKWTKKYFINHLAIHSCFKGKIELIDHLIKQDYFEEY-YTKKA 158
>ref|ZP_00875220.1| conserved hypothetical protein [Streptococcus suis 89/1591]
gb|EAP40604.1| conserved hypothetical protein [Streptococcus suis 89/1591]
Length = 162
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 119/161 (73%), Gaps = 6/161 (3%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILF-AIFAVLVG 59
MIK+FGKIRYHWQP+LSW+IIYWS+ F PIF+G++LL E+ ++ SR+FIL ++FAVLV
Sbjct: 1 MIKIFGKIRYHWQPDLSWAIIYWSLTFTPIFIGMTLLLEKLQV-SRLFILLVSLFAVLVV 59
Query: 60 IGLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVED--KSYLFYMRK 117
+GLHRYF I++ LRI S F +K+ I+TI KIEV+ + + ++ +++MRK
Sbjct: 60 LGLHRYFEIKDEH-LRIASANPFAVQKIEIATIEKIEVSYLAIRIFSQEFPNGQVYHMRK 118
Query: 118 WPKKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKA 158
W KKYF++ LA++ F+G++ L D+ IK DYFE Y + KKA
Sbjct: 119 WTKKYFINHLAIHSCFKGKIELIDHLIKQDYFEEY-YTKKA 158
>ref|ZP_00788931.1| Unknown [Streptococcus agalactiae CJB111]
gb|EAO72328.1| Unknown [Streptococcus agalactiae CJB111]
Length = 90
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 74 LRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDK-SYLFYMRKWPKKYFLDALAVNPY 132
LRIVSF K I I KIEVTKS++ + + +FYMRKWPKKYFLDALA+ P
Sbjct: 1 LRIVSFNFLRRSKFPIEDIAKIEVTKSSVTIKFNNNHERIFYMRKWPKKYFLDALAIEPK 60
Query: 133 FQGEVILSDNFIKLDYFEVYQHDKKALTRG 162
+GEV L DN IK+DYFE Y++DKKALT+
Sbjct: 61 SKGEVELLDNLIKMDYFECYRYDKKALTKS 90
>ref|YP_001200846.1| hypothetical protein SSU98_1288 [Streptococcus suis 98HAH33]
gb|ABP92446.1| hypothetical protein SSU98_1288 [Streptococcus suis 98HAH33]
Length = 151
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 83/123 (67%), Gaps = 10/123 (8%)
Query: 42 EIPS-RVFILF-AIFAVLVGIGLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTK 99
E+ S ++FIL ++FAVLV +GLHRYF I++ LRI S F +K+ I+TI KIEV
Sbjct: 29 EVASFKIFILLVSLFAVLVVLGLHRYFEIKDEH-LRIASANPFAVQKIEIATIEKIEV-- 85
Query: 100 STLCLHVEDKSY----LFYMRKWPKKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHD 155
S L + + K + ++YMRKW KKYF++ LA++ F+G++ L D+ IK DYFE Y +
Sbjct: 86 SYLAIRIFAKEFPNGRMYYMRKWTKKYFINHLAIHSCFKGKIELIDHLIKQDYFEEY-YT 144
Query: 156 KKA 158
KKA
Sbjct: 145 KKA 147
>ref|ZP_00787858.1| Unknown [Streptococcus agalactiae CJB111]
gb|EAO73407.1| Unknown [Streptococcus agalactiae CJB111]
Length = 42
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/42 (90%), Positives = 40/42 (95%)
Query: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTE 42
MIKLFGKIRYHWQPELSW+IIYWSIA APIF+GL LLYERTE
Sbjct: 1 MIKLFGKIRYHWQPELSWAIIYWSIAIAPIFIGLYLLYERTE 42
>gb|AAC36851.1| pore-forming peptide
Length = 153
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 12/130 (9%)
Query: 7 KIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTE---IPSRVFILFAIFAVLVGIGLH 63
K +++WQPEL+ +IIYWS F +F+ L L E I + V + F +FA L G+
Sbjct: 3 KQKFYWQPELASTIIYWSCTFCILFISLILALENNGPYLISNLVMVPFFVFAYL---GIA 59
Query: 64 RYF-IIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCL---HVEDKSYLFYMRKWP 119
R F + E + I+R V + F + L +S I K+ + ++ + ++ S +F M+K
Sbjct: 60 RSFNMTETSLIVRDVLW--FRKKALPLSQIEKVTYNEKSIEIFSSEFKEGSKVFLMKKKT 117
Query: 120 KKYFLDALAV 129
FL+AL +
Sbjct: 118 DSLFLEALKI 127
>ref|NP_815432.1| ebsA protein [Enterococcus faecalis V583]
sp|P36920|EBSA_ENTFA Pore-forming protein ebsA
gb|AAO81502.1| ebsA protein [Enterococcus faecalis V583]
Length = 153
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 12/130 (9%)
Query: 7 KIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTE---IPSRVFILFAIFAVLVGIGLH 63
K +++WQPEL+ +IIYWS F +F+ L L E I + V + F +FA L G+
Sbjct: 3 KQKFYWQPELASTIIYWSCTFCILFISLILALENNGPYLISNLVMVPFFVFAYL---GIA 59
Query: 64 RYF-IIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCL---HVEDKSYLFYMRKWP 119
R F + E + I+R V + F + L +S I K+ + ++ + ++ S +F M+K
Sbjct: 60 RSFNMTETSLIVRDVLW--FRKKALPLSQIEKVTYNEKSIEIFSSEFKEGSKVFLMKKKT 117
Query: 120 KKYFLDALAV 129
FL+AL V
Sbjct: 118 IPLFLEALKV 127
>ref|ZP_02185503.1| hypothetical protein CAT7_11725 [Carnobacterium sp. AT7]
gb|EDP67723.1| hypothetical protein CAT7_11725 [Carnobacterium sp. AT7]
Length = 150
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 7 KIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGIGLHRYF 66
++++ E ++ +IYWSI + F+ L L E I + L IF +L+ GL
Sbjct: 6 RLKFSLSIEPAFQVIYWSICWLAFFLFLILALETQTISLTMVSLIIIFGILLFFGLGSTL 65
Query: 67 IIENNGILRIVSFKLFGPRKLLISTITKIEVTKS---TLCLHVEDKSYLFYMRKWPKKYF 123
I+NN L+I F+ + + + +TKI + + L+ + + + Y+ K KK F
Sbjct: 66 KIKNNN-LKISYFRGIKKKSISLDELTKITFSDKREINVFLNQDKEGFQIYLNKKNKKKF 124
Query: 124 LDALAVN-PYFQGE 136
+ + N P Q E
Sbjct: 125 YEYIKTNAPLIQLE 138
>ref|NP_523724.2| Multi drug resistance 49 CG3879-PA [Drosophila melanogaster]
gb|AAF58437.2| CG3879-PA [Drosophila melanogaster]
Length = 1302
Score = 36.6 bits (83), Expect = 0.57, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 5/48 (10%)
Query: 16 LSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVF----ILFAIFAVLVG 59
LSW IIY +A A I+ G++L+ + ++P RV+ ++ +FAV++G
Sbjct: 305 LSWLIIYLCMALA-IWYGVTLILDERDLPDRVYTPAVLVIVLFAVIMG 351
>sp|Q00449|MDR49_DROME Multidrug resistance protein homolog 49 (P-glycoprotein 49)
gb|AAA28679.1| P glycoprotein
gb|AAL14020.1| SD10012p [Drosophila melanogaster]
Length = 1302
Score = 36.6 bits (83), Expect = 0.57, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 5/48 (10%)
Query: 16 LSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVF----ILFAIFAVLVG 59
LSW IIY +A A I+ G++L+ + ++P RV+ ++ +FAV++G
Sbjct: 305 LSWLIIYLCMALA-IWYGVTLILDERDLPDRVYTPAVLVIVLFAVIMG 351
>ref|YP_001438011.1| hypothetical protein ESA_01921 [Enterobacter sakazakii ATCC
BAA-894]
gb|ABU77175.1| hypothetical protein ESA_01921 [Enterobacter sakazakii ATCC
BAA-894]
Length = 632
Score = 33.5 bits (75), Expect = 4.6, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 102 LCLHVEDKSYLFYMRKWPKKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKAL 159
+ LH E K YL MR K +LD+ + + + + +V LSD+ I+ YF+ +D +A+
Sbjct: 236 IALHTEKKDYLAGMRVEDKVAWLDSHSYSQFLRDKVGLSDSAIR--YFQQRTNDFQAI 291
>ref|ZP_01859332.1| hypothetical protein BSG1_00325 [Bacillus sp. SG-1]
gb|EDL65497.1| hypothetical protein BSG1_00325 [Bacillus sp. SG-1]
Length = 227
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 87 LLISTITKIEVTKSTLCLHVEDKSYLFYMR--KWPKKYFLDALAVNPYFQGEVILSDNFI 144
LL+ T T V +S L H+ K Y R K ++Y D L V+PYF ++ +NF+
Sbjct: 37 LLVGTGTDAAVFRSMLLPHLAFKVYADEKRDKKAVEEYVYDRLGVSPYFSQKLGSGENFL 96
Query: 145 KLDYFE 150
L + E
Sbjct: 97 VLSFVE 102
>ref|ZP_01274854.1| hypothetical protein Lreu23DRAFT_0408 [Lactobacillus reuteri
100-23]
ref|YP_001271526.1| hypothetical protein Lreu_0927 [Lactobacillus reuteri F275]
gb|EAS88188.1| hypothetical protein Lreu23DRAFT_0408 [Lactobacillus reuteri
100-23]
gb|ABQ83189.1| hypothetical protein Lreu_0927 [Lactobacillus reuteri F275]
Length = 135
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 7 KIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGIGLHRYF 66
+ RY +QP+L+ +II W F GL + E T + FA+F +L + R
Sbjct: 9 ETRYFYQPDLTGTIISWCWTFLFFIAGLVIWLEITHFQWLSALFFAVFVILALLEWRRRT 68
Query: 67 IIENNGILRIVSFKLFGPRKLL--ISTITKIEVTKSTLCLHVEDKSYLF 113
++ ++V +L + L+ IS I + E TK T+ + V + F
Sbjct: 69 VVITPT--KMVFNRLLQKQYLVIPISDIRQPEFTKHTVTITVNGEVMSF 115
>ref|NP_986525.1| AGL142Cp [Ashbya gossypii ATCC 10895]
gb|AAS54349.1| AGL142Cp [Ashbya gossypii ATCC 10895]
Length = 1497
Score = 32.7 bits (73), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 8 IRYHWQ-PELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLV 58
++ +W+ PE WS I+ SI FA +F+G S +T I +FA+F LV
Sbjct: 1169 LQQYWRSPEYLWSKIFMSI-FASLFIGFSFFKSKTSIQGLQNQMFAVFLFLV 1219
>gb|AAC33146.1| rRNA N-6-methyltransferase [Staphylococcus simulans]
Length = 244
Score = 32.3 bits (72), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 14/130 (10%)
Query: 3 KLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGIGL 62
K+FG IRY+ ++ I++ SIA + +R R LF + V +
Sbjct: 97 KIFGNIRYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLALFLMAEVDI---- 152
Query: 63 HRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVEDKSYLFYMRKWPKKY 122
IL +V + F P+ + S++ ++ KS + H + + Y +++ KW K
Sbjct: 153 ---------SILSMVPREYFHPKPKVNSSLIRLNRKKSRIS-HKDKQKYNYFVMKWVNKE 202
Query: 123 FLDALAVNPY 132
+ N +
Sbjct: 203 YKKIFTKNQF 212
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 10, 2008 4:54 AM
Number of letters in database: 2,222,278,849
Number of sequences in database: 6,515,104
Lambda K H
0.330 0.146 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 6515104
Number of Hits to DB: 694,257,437
Number of extensions: 26455273
Number of successful extensions: 74304
Number of sequences better than 10.0: 50
Number of HSP's gapped: 75420
Number of HSP's successfully gapped: 50
Length of query: 162
Length of database: 2,222,278,849
Length adjustment: 123
Effective length of query: 39
Effective length of database: 1,420,921,057
Effective search space: 55415921223
Effective search space used: 55415921223
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 73 (32.7 bits)