Alien (alien)

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UGID:100157 UniGene Dm.20642 Drosophila melanogaster (fruit fly) alien

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Alien (alien)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_523517.1	alien CG9556-PB, isoform B	D. melanogaster	100.0	443
NP_001002055.1	COP9 constitutive photomorphogenic homolog subunit 2	D. rerio	90.1	442
NP_001085244.1	hypothetical protein LOC432342	X. laevis	90.1	442
NP_034069.2	COP9 (constitutive photomorphogenic) homolog, subunit 2	M. musculus	89.6	442
NP_004227.1	COP9 constitutive photomorphogenic homolog subunit 2	H. sapiens	89.6	442
NP_491740.1	COP-9 SigNalosome subunit family member (csn-2)	C. elegans	74.3	413
NP_565632.1	FUS12 (FUSCA 12)	A. thaliana	66.5	433
XP_001690054.1	COP9 signalosome subunit	C. reinhardtii	63.1	431
XP_324773.1	hypothetical protein	N. crassa	54.6	438

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	whole body; embryonic tissue; blood; uncharacterized tissue; mixed; ovary; testis; head

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	2L
Map position:	29F7-29F7
UniSTS entry:	Chr 2L	Dm0276

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

U57758.1	Drosophila melanogaster putative thyroid receptor interacting protein (alien) mRNA, complete cds	P
AF129079.1	Drosophila melanogaster COP9 signalosome subunit 2 CSN2 mRNA, complete cds	PA
AY069836.1	Drosophila melanogaster SD08021 full length cDNA	PA
NM_078793.4	Drosophila melanogaster alien CG9556-RB, transcript variant B (alien), mRNA	P
AY118505.1	Drosophila melanogaster LD10463 full insert cDNA	PA
NM_164843.1	Drosophila melanogaster alien CG9556-RA, transcript variant A (alien), mRNA	P

EST sequences (10 of 37) [Show all sequences]

AI134843.1	Clone GH12411	head	5' read	P
AI239198.1	Clone GM06138	ovary	5' read	P
AI388935.1	Clone GH19988	head	5' read	P
AI511751.1	Clone LD43256	whole body	5' read	P
AI518333.1	Clone LD37815	whole body	5' read	P
AI534373.1	Clone SD07175	embryonic tissue	5' read	P
AI546587.1	Clone SD08021	embryonic tissue	5' read	P
AW942135.1	Clone LD10463	whole body	3' read	A
AW944540.1	Clone SD08021	embryonic tissue	3' read	PA
BF494680.2	Clone AT03402	testis	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria