Retained (retn)

Restricted Expression:

embryo [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.

GEO profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

whole body; mixed; uncharacterized tissue

NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:100155 UniGene Dm.20640 Drosophila melanogaster (fruit fly) retn

Links

Retained (retn)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_788434.1	retained CG5403-PB, isoform B	D. melanogaster	100.0	910
NP_001085467.1	MGC80148 protein	X. laevis	75.7	185
NP_492644.2	CEM Fate Inhibitor family member (cfi-1)	C. elegans	68.9	151
NP_001017363.1	AT rich interactive domain 3C (BRIGHT- like)	H. sapiens	68.1	232
NP_001017362.1	AT rich interactive domain 3C	M. musculus	67.0	236
NP_001076471.1	AT rich interactive domain 3B	D. rerio	59.6	359

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	2R
Map position:	59F5-59F5
UniSTS entry:	Chr 2R	(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

U62542.1	Drosophila melanogaster dead ringer (dead ringer) mRNA, complete cds	PA
NM_057516.3	Drosophila melanogaster retained CG5403-RA, transcript variant A (retn), mRNA	P
AY118955.1	Drosophila melanogaster LD35748 full insert cDNA	PA
NM_176254.1	Drosophila melanogaster retained CG5403-RB, transcript variant B (retn), mRNA	P

EST sequences (10 of 57) [Show all sequences]

AI455872.1	Clone LD35593	whole body	5' read	P
AI456624.1	Clone LD36707	whole body	5' read	P
AI515768.1	Clone LD41431	whole body	5' read	P
AI514605.1	Clone LD46135	whole body	5' read	P
AI518901.1	Clone LD35748	whole body	5' read
AI519077.1	Clone LD38349	whole body	5' read	P
AI520398.1	Clone LD40546	whole body	5' read	P
AI520423.1	Clone LD40579	whole body	5' read	P
BG638563.1	Clone LD29637	whole body	3' read	P
AA949663.2	Clone LD29637	whole body	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria