BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= HHVTW017
(734 letters)
Database: nr
1,508,275 sequences; 485,782,529 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9629284|ref|NP_044484.1| UL15 [Human herpesvirus 2] >gnl|BL_O... 1459 0.0
gi|9629397|ref|NP_044616.1| UL15 [Human herpesvirus 1] >gnl|BL_O... 1387 0.0
gi|30984443|ref|NP_851874.1| UL15 [Cercopithecine herpesvirus 1]... 1286 0.0
gi|9629774|ref|NP_045262.1| 47/44 [Equine herpesvirus 4] >gnl|BL... 921 0.0
gi|9626782|ref|NP_041054.1| DNA packaging protein [Equine herpes... 920 0.0
gi|9625919|ref|NP_040165.1| DNA packaging protein [Human herpesv... 870 0.0
gi|9629858|ref|NP_045342.1| UL15 protein [Bovine herpesvirus 1] ... 854 0.0
gi|10834884|ref|NP_066845.1| UL15 protein [Gallid herpesvirus 3]... 852 0.0
gi|13242438|ref|NP_077457.1| unknown [Cercopithecine herpesvirus... 849 0.0
gi|12084843|ref|NP_073308.1| UL15 DNA packaging protein (termina... 817 0.0
gi|11095847|gb|AAG30054.1|AF282130_17 UL15 terminase [Meleagrid ... 816 0.0
gi|10180719|gb|AAG14207.1|AF243438_22 UL15 DNA packaging protein... 810 0.0
gi|9635112|ref|NP_057773.1| UL15 [Gallid herpesvirus 2] >gnl|BL_... 770 0.0
gi|28395422|gb|AAO38880.1| UL15 [Pseudorabies virus] 723 0.0
gi|74013|pir||WMBE31 38K protein - human herpesvirus 1 >gnl|BL_O... 665 0.0
gi|5708110|emb|CAB52372.1| terminase [Gallid herpesvirus 1] 646 0.0
gi|20452460|gb|AAM22108.1|AF501667_7 DNA packaging protein [Cerc... 630 e-179
gi|18307972|gb|AAL67783.1|AF458647_5 UL15 [Squirrel monkey herpe... 602 e-171
gi|76472|pir||G27341 hypothetical protein ORF42 - human herpesvi... 512 e-144
gi|334089|gb|AAA47479.1| UL15 491 e-137
gi|9625775|ref|NP_040024.1| UL89 [Human herpesvirus 5] >gnl|BL_O... 448 e-124
gi|20026680|ref|NP_612722.1| DNA packaging protein UL89 [Chimpan... 436 e-121
gi|14251081|ref|NP_116438.1| T89 [Tupaia herpesvirus] >gnl|BL_OR... 436 e-121
gi|74010|pir||QQBEI5 UL89 protein - human cytomegalovirus (strai... 424 e-117
gi|9633135|ref|NP_050241.1| Putative terminase [Human herpesviru... 421 e-116
gi|74011|pir||QQBEH6 12L protein - human herpesvirus 6 (strain U... 414 e-114
gi|1174999|sp|P24443|VTER_HSV6U Probable DNA packaging protein (... 414 e-114
gi|9628784|ref|NP_043815.1| putative DNA packaging protein [Huma... 408 e-112
gi|10140950|ref|NP_065527.1| DNA packaging protein [Alcelaphine ... 380 e-104
gi|13095610|ref|NP_076521.1| cleavage/packaging protein [Bovine ... 367 e-100
gi|20453820|gb|AAM22132.1|AF478169_25 cleavage/packaging protein... 362 1e-98
gi|27452870|gb|AAO12374.1| cleavage/packaging protein [Porcine l... 360 5e-98
gi|2246552|gb|AAB62677.1| ORF 29, conserved spliced gene, DNA pa... 356 1e-96
gi|27452831|gb|AAO12336.1| cleavage/packaging protein [Porcine l... 354 3e-96
gi|9625642|ref|NP_039889.1| probable DNA packaging protein [Huma... 354 4e-96
gi|1136808|gb|AAB08384.1| gene 29 protein 352 2e-95
gi|9625990|ref|NP_040231.1| ORF 29~conserved spliced gene [Saimi... 349 1e-94
gi|18025509|gb|AAK95453.1| BDRF1 [cercopithicine herpesvirus 15] 348 2e-94
gi|30348532|emb|CAC84324.1| terminase [Saimiriine herpesvirus 2] 347 3e-94
gi|9631219|ref|NP_048000.1| orf29a/b [Ateline herpesvirus 3] >gn... 346 1e-93
gi|6625593|gb|AAF19294.1|AF105037_26 29 [murid herpesvirus 4] 332 1e-89
gi|9845374|ref|NP_064188.1| pR89 [Rat cytomegalovirus] >gnl|BL_O... 322 2e-86
gi|2909851|gb|AAC40814.1| UL89 protein [human herpesvirus 5] 311 2e-83
gi|628161|pir||S33039 hypothetical protein - human herpesvirus 4... 267 5e-70
gi|17940712|gb|AAL49732.1| DNA packaging protein [human herpesvi... 247 6e-64
gi|9628362|ref|NP_042953.1| DNA packaging protein [Human herpesv... 246 8e-64
gi|20303007|gb|AAM18956.1|AF499021_1 terminase [Cercopithecine h... 234 6e-60
gi|20303005|gb|AAM18955.1|AF499020_1 terminase [Cercopithecine h... 233 7e-60
gi|20303009|gb|AAM18957.1|AF499022_1 terminase [Baboon herpesvir... 230 6e-59
gi|24943111|ref|NP_733873.1| ORF20 [Callitrichine herpesvirus 3]... 228 4e-58
gi|7330018|gb|AAF60007.1|AF210726_28 packaging protein [Macaca m... 222 2e-56
gi|18653835|ref|NP_570769.1| unknown [Macaca mulatta rhadinoviru... 222 2e-56
gi|18845995|ref|NP_572081.1| ORF 29b; packaging protein homolog;... 221 4e-56
gi|9628031|ref|NP_042625.1| ORF 29b; possible terminase; ORF 29a... 218 3e-55
gi|9631221|ref|NP_048001.1| orf 29B [Ateline herpesvirus 3] >gnl... 215 2e-54
gi|9629607|ref|NP_044866.1| packaging protein [murid herpesvirus... 209 2e-52
gi|19569593|gb|AAL92110.1|AF486631_1 terminase [Bovine herpesvir... 206 9e-52
gi|22087523|gb|AAM90958.1|AF514778_1 putative DNA packaging prot... 197 7e-49
gi|3378226|gb|AAC28474.1| terminase [Feline herpesvirus 1] >gnl|... 187 6e-46
gi|9945300|gb|AAC67575.3| putative DNA packaging protein UL89 [R... 184 7e-45
gi|6319210|gb|AAF07209.1|AF196647_1 terminase [bottlenose dolphi... 183 1e-44
gi|1066209|emb|CAA62042.1| putative DNA packaging protein [Canin... 178 3e-43
gi|33359657|gb|AAQ17076.1| terminase [Psittacid herpesvirus 1] 141 4e-32
gi|2909852|gb|AAC40815.1| UL889 protein [human herpesvirus 5] 137 9e-31
gi|9845380|ref|NP_064194.1| pR89 [Rat cytomegalovirus] >gnl|BL_O... 134 5e-30
gi|28804711|dbj|BAC58112.1| DNA packaging protein [Baboon herpes... 117 8e-25
gi|28804705|dbj|BAC58107.1| DNA packaging protein [Cercopithecin... 113 1e-23
gi|28804717|dbj|BAC58117.1| DNA packaging protein [Cercopithecin... 113 1e-23
gi|11278291|pir||T44026 hypothetical protein U66 [imported] - hu... 111 5e-23
gi|9628368|ref|NP_042959.1| DNA pacakaging protein [Human herpes... 108 4e-22
gi|18027276|gb|AAL55727.1|AF275656_1 terminase [Badger herpesvirus] 100 2e-19
gi|18846000|ref|NP_572086.1| ORF 29a; packaging protein homolog;... 99 3e-19
gi|18071139|gb|AAL58192.1|AF236051_1 terminase [California sea l... 98 5e-19
gi|9631220|ref|NP_048006.1| orf 29A [Ateline herpesvirus 3] >gnl... 96 2e-18
gi|18653840|ref|NP_570774.1| unknown [Macaca mulatta rhadinoviru... 96 2e-18
gi|28804699|dbj|BAC58102.1| DNA packaging protein [Cercopithecin... 96 3e-18
gi|24943115|ref|NP_733877.1| ORF24 [Callitrichine herpesvirus 3]... 95 5e-18
gi|9625637|ref|NP_039890.1| DNA packaging protein [Human herpesv... 91 6e-17
gi|9628036|ref|NP_042630.1| ORF 29a; expression of ORF 29a and 2... 91 1e-16
gi|9629608|ref|NP_044871.1| packaging protein [murid herpesvirus... 88 5e-16
gi|27451957|gb|AAO15024.1| putative DNA terminase [Asinine herpe... 87 1e-15
gi|20270988|gb|AAM18492.1|AF495531_1 putative DNA terminase [Equ... 87 1e-15
gi|27451961|gb|AAO15026.1| putative DNA terminase [Asinine herpe... 87 1e-15
gi|27451963|gb|AAO15027.1| putative DNA terminase [Asinine herpe... 86 3e-15
gi|4580947|gb|AAD24548.1| terminase [Asian elephant endothelioly... 83 2e-14
gi|6224668|gb|AAF05897.1|AF091070_1 terminase [callitrichine her... 83 2e-14
gi|1066188|emb|CAA62041.1| putative DNA packaging protein [Canin... 83 2e-14
gi|27451959|gb|AAO15025.1| putative DNA terminase [Asinine herpe... 82 4e-14
gi|6224666|gb|AAF05896.1|AF091069_1 terminase [Leporid herpesvir... 81 8e-14
gi|13517558|gb|AAK28848.1|AF327835_1 terminase [Ovine herpesviru... 81 8e-14
gi|6224652|gb|AAF05889.1|AF091062_1 terminase [callitrichine her... 79 2e-13
gi|6224664|gb|AAF05895.1|AF091068_1 terminase [Bovine herpesviru... 79 2e-13
gi|13517556|gb|AAK28847.1|AF327834_1 terminase [Caprine herpesvi... 79 4e-13
gi|16580159|gb|AAL17627.1| DNA packaging protein [deer malignant... 77 9e-13
gi|6224632|gb|AAF05879.1|AF091052_1 terminase [Cercopithecine he... 77 1e-12
gi|6224636|gb|AAF05881.1|AF091054_1 terminase [Cercopithecine he... 75 3e-12
gi|13786050|gb|AAK39548.1|AF354746_1 terminase [Asian elephant e... 75 4e-12
gi|6319160|gb|AAF07189.1|AF193618_1 terminase [California sea li... 74 7e-12
gi|16923248|gb|AAL29892.1| DNA packaging protein [American bison... 73 2e-11
gi|9626884|ref|NP_041153.1| terminase [Ictalurid herpesvirus 1] ... 67 9e-10
gi|13786048|gb|AAK39547.1|AF354745_1 terminase [Asian elephant e... 67 1e-09
gi|237259|gb|AAB20055.1| UL15 [human herpesvirus 1] 61 8e-08
gi|10946345|gb|AAG24867.1|AF300864_1 terminase [Asian elephant e... 51 9e-05
>gi|9629284|ref|NP_044484.1| UL15 [Human herpesvirus 2]
gi|1869837|emb|CAB06775.1| UL15 [Human herpesvirus 2]
Length = 734
Score = 1459 bits (3778), Expect = 0.0
Identities = 734/734 (100%), Positives = 734/734 (100%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLGGDALRVPFLDFATATPKRHQTVV 60
MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLGGDALRVPFLDFATATPKRHQTVV
Sbjct: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLGGDALRVPFLDFATATPKRHQTVV 60
Query: 61 PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLEFLAPELVRAVARL 120
PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLEFLAPELVRAVARL
Sbjct: 61 PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLEFLAPELVRAVARL 120
Query: 121 RFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLAETT 180
RFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLAETT
Sbjct: 121 RFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLAETT 180
Query: 181 GPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPL 240
GPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPL
Sbjct: 181 GPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPL 240
Query: 241 FSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDE 300
FSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDE
Sbjct: 241 FSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDE 300
Query: 301 IDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANF 360
IDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANF
Sbjct: 301 IDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANF 360
Query: 361 IRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPR 420
IRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPR
Sbjct: 361 IRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPR 420
Query: 421 VVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTK 480
VVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTK
Sbjct: 421 VVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTK 480
Query: 481 SAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDFIIFALEH 540
SAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDFIIFALEH
Sbjct: 481 SAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDFIIFALEH 540
Query: 541 FFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEM 600
FFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEM
Sbjct: 541 FFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEM 600
Query: 601 HRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQE 660
HRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQE
Sbjct: 601 HRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQE 660
Query: 661 LVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAAP 720
LVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAAP
Sbjct: 661 LVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAAP 720
Query: 721 TGIPPAFFPITRTS 734
TGIPPAFFPITRTS
Sbjct: 721 TGIPPAFFPITRTS 734
>gi|9629397|ref|NP_044616.1| UL15 [Human herpesvirus 1]
gi|139646|sp|P04295|VTER_HSV11 PROBABLE DNA PACKAGING PROTEIN
(TERMINASE)
gi|74012|pir||WMBET5 UL15 protein - human herpesvirus 1 (strain 17)
gi|59501|emb|CAA32330.1| UL15 [Human herpesvirus 1]
Length = 735
Score = 1387 bits (3591), Expect = 0.0
Identities = 697/735 (94%), Positives = 711/735 (95%), Gaps = 1/735 (0%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLGGDALRVPFLDFATATPKRHQTVV 60
MFGQQLASDVQQYLERLEKQRQ KVG DEASAGLT+GGDALRVPFLDFATATPKRHQTVV
Sbjct: 1 MFGQQLASDVQQYLERLEKQRQLKVGADEASAGLTMGGDALRVPFLDFATATPKRHQTVV 60
Query: 61 PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLEFLAPELVRAVARL 120
PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQL+GRDFGGDHTAKLEFLAPELVRAVARL
Sbjct: 61 PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLKGRDFGGDHTAKLEFLAPELVRAVARL 120
Query: 121 RFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLAETT 180
RF+ECAP D VPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSL ETT
Sbjct: 121 RFKECAPADVVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLTETT 180
Query: 181 GPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPL 240
GPPKKRAKVDVATHG+TYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPL
Sbjct: 181 GPPKKRAKVDVATHGRTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPL 240
Query: 241 FSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDE 300
FSD AVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVF+E
Sbjct: 241 FSDAAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFEE 300
Query: 301 IDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANF 360
IDACLRGWFGS+RVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANF
Sbjct: 301 IDACLRGWFGSARVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANF 360
Query: 361 IRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPR 420
IRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPR
Sbjct: 361 IRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPR 420
Query: 421 VVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTK 480
VVTHTNATACSCYILNKPVFITMDGAVRRTADLFL DSFMQEIIGGQARETGDDRPVLTK
Sbjct: 421 VVTHTNATACSCYILNKPVFITMDGAVRRTADLFLADSFMQEIIGGQARETGDDRPVLTK 480
Query: 481 SAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDFIIFALEH 540
SAGERFLLYRPSTTTNSGLMAP+LYVYVDPAFTANTRASGTG+AVVGRYRDD+IIFALEH
Sbjct: 481 SAGERFLLYRPSTTTNSGLMAPDLYVYVDPAFTANTRASGTGVAVVGRYRDDYIIFALEH 540
Query: 541 FFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEM 600
FFLRALTGSAPADIARCVVHSL QVLALHPGAFR VRVAVEGNSSQDSAVAIATHVHTEM
Sbjct: 541 FFLRALTGSAPADIARCVVHSLTQVLALHPGAFRGVRVAVEGNSSQDSAVAIATHVHTEM 600
Query: 601 HRILASAGAN-GPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQ 659
HR+LAS GA+ G GPELLFYHCEPPG AVLYPFFLLNKQKTPAFE+FIKKFNSGGVMASQ
Sbjct: 601 HRLLASEGADAGSGPELLFYHCEPPGSAVLYPFFLLNKQKTPAFEHFIKKFNSGGVMASQ 660
Query: 660 ELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAA 719
E+VS TVRLQTDPVEYL EQLNNL ETVSPNTDVR YSGKRNGA+DDLMVAVIMAIYLAA
Sbjct: 661 EIVSATVRLQTDPVEYLLEQLNNLTETVSPNTDVRTYSGKRNGASDDLMVAVIMAIYLAA 720
Query: 720 PTGIPPAFFPITRTS 734
G P F PITR S
Sbjct: 721 QAGPPHTFAPITRVS 735
>gi|30984443|ref|NP_851874.1| UL15 [Cercopithecine herpesvirus 1]
gi|28804650|dbj|BAC58054.1| UL15 [Cercopithecine herpesvirus 1]
gi|30844257|gb|AAP41433.1| UL15 [Cercopithecine herpesvirus 1]
Length = 738
Score = 1286 bits (3327), Expect = 0.0
Identities = 643/732 (87%), Positives = 677/732 (91%), Gaps = 1/732 (0%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLGGDALRVPFLDFATATPKRHQTVV 60
MFG+QLA DV+ + E LEKQRQQ++G +A AGL GDALRVPFLDFATA P+RHQTVV
Sbjct: 1 MFGRQLADDVRLFFEGLEKQRQQRMGASDAPAGLA-AGDALRVPFLDFATAAPRRHQTVV 59
Query: 61 PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLEFLAPELVRAVARL 120
PGVGTLHDCCEH+PLFSAVARRLLFNSLVP QLRGRDFGGD KLEFLAPELVRAVARL
Sbjct: 60 PGVGTLHDCCEHAPLFSAVARRLLFNSLVPPQLRGRDFGGDRATKLEFLAPELVRAVARL 119
Query: 121 RFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLAETT 180
RF ECAP D VPQRNAYYSVLNTF+ALHRSEAF+QLVHFVRDFA+LL+TSFRASSLAE
Sbjct: 120 RFAECAPGDVVPQRNAYYSVLNTFRALHRSEAFQQLVHFVRDFARLLRTSFRASSLAEDA 179
Query: 181 GPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPL 240
GP KKRAKVDVATHG+++GTLE FQKMILMHATYFLAAVLLGDHAEQV+TFLRLVFEIPL
Sbjct: 180 GPAKKRAKVDVATHGRSHGTLEPFQKMILMHATYFLAAVLLGDHAEQVSTFLRLVFEIPL 239
Query: 241 FSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDE 300
FSD AVRHFRQRATVFLVPRRHGKTWF+VPLIALSLASFRGIKIGYTAHIRKATEPVFDE
Sbjct: 240 FSDAAVRHFRQRATVFLVPRRHGKTWFIVPLIALSLASFRGIKIGYTAHIRKATEPVFDE 299
Query: 301 IDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANF 360
IDACL+GWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANF
Sbjct: 300 IDACLQGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANF 359
Query: 361 IRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPR 420
IRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPR
Sbjct: 360 IRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPR 419
Query: 421 VVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTK 480
VVTHTNATACSCYILNKPVFITMDGA+RRTADLFL DSFMQEIIGGQ+RE DDRPVLTK
Sbjct: 420 VVTHTNATACSCYILNKPVFITMDGALRRTADLFLADSFMQEIIGGQSREADDDRPVLTK 479
Query: 481 SAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDFIIFALEH 540
AGERFLLYRPSTTTN GLMAPELYVYVDPAFTANTRASGTG+A VGRYRDDFI+FALEH
Sbjct: 480 PAGERFLLYRPSTTTNGGLMAPELYVYVDPAFTANTRASGTGVAAVGRYRDDFIVFALEH 539
Query: 541 FFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEM 600
FFLRALTGSA DIARC HSL QVLALHPG FRSVRVAVEGNSSQDSAVAIA +H E+
Sbjct: 540 FFLRALTGSAADDIARCAAHSLTQVLALHPGVFRSVRVAVEGNSSQDSAVAIAARLHAEL 599
Query: 601 HRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQE 660
HR+LAS GA PELLFYHCEPPGG+VLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQE
Sbjct: 600 HRLLASGGAGVAVPELLFYHCEPPGGSVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQE 659
Query: 661 LVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAAP 720
+VSVT+RLQTDPVEYL+ QLNNL E +SPN+D R YSGKRNGA+DDLMVAVIMA+YLAA
Sbjct: 660 VVSVTMRLQTDPVEYLTAQLNNLTEILSPNSDARSYSGKRNGASDDLMVAVIMAVYLAAT 719
Query: 721 TGIPPAFFPITR 732
AF P+TR
Sbjct: 720 PHAHHAFAPVTR 731
>gi|9629774|ref|NP_045262.1| 47/44 [Equine herpesvirus 4]
gi|11278290|pir||T42588 DNA-packaging protein 47/44 - equine
herpesvirus 4 (strain NS80567)
gi|2605992|gb|AAC59564.1| 47/44 [Equine herpesvirus 4]
Length = 734
Score = 921 bits (2380), Expect = 0.0
Identities = 470/733 (64%), Positives = 571/733 (77%), Gaps = 18/733 (2%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLGG-DALRVPFLDFATATPKRHQTV 59
MFG+ L+ + QY E L K+ Q + G +A GG D ++ FL+FA TP+RHQTV
Sbjct: 1 MFGKALSRETIQYFETLRKEVQSRSGAKNRAAEAQTGGEDDVKTAFLNFAIPTPQRHQTV 60
Query: 60 VPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLE------FLAPEL 113
VPGVGTLHDCCE + +F++VARRLLF SL + GG+ +L+ ++ P++
Sbjct: 61 VPGVGTLHDCCETAQIFASVARRLLFRSLSKWR------GGESKERLDPSSVEAYVDPKV 114
Query: 114 VRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRA 173
+A+ + F E +A RNAYYS++NTF +L S+AF Q+ +FV F++L+ TSF
Sbjct: 115 KQALKTISFVEYNDAEARSCRNAYYSIMNTFDSLRSSDAFHQVANFVARFSRLVDTSFNG 174
Query: 174 SSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLR 233
+ L KR KVDV T+G+ GTLELFQKMILMHATYF+AAV+LGDHA+++ FL+
Sbjct: 175 ADLDGDGQQTSKRIKVDVPTYGKQRGTLELFQKMILMHATYFIAAVILGDHADRIGAFLK 234
Query: 234 LVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKA 293
+VF P FSD +RHFRQRATVFLVPRRHGKTWFLVPLIAL+LA+F+GIKIGYTAHIRKA
Sbjct: 235 MVFNTPEFSDATIRHFRQRATVFLVPRRHGKTWFLVPLIALALATFKGIKIGYTAHIRKA 294
Query: 294 TEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLL 353
TEPVFDEI A LR WFG+S VDHVKGE ISFSFPDGS+STIVFASSHNTNGIRGQDFNLL
Sbjct: 295 TEPVFDEIGARLRQWFGNSPVDHVKGENISFSFPDGSKSTIVFASSHNTNGIRGQDFNLL 354
Query: 354 FVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYI 413
FVDEANFIRP+AVQTI+GFLNQ NCKIIFVSSTNTGKASTSFLYNL+GAADELLNVVTYI
Sbjct: 355 FVDEANFIRPEAVQTIIGFLNQTNCKIIFVSSTNTGKASTSFLYNLKGAADELLNVVTYI 414
Query: 414 CDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEII-GGQARETG 472
CD+HM RV HTNAT+CSCYILNKPVFITMDGA+R TA+LFLPDSFMQEII GG
Sbjct: 415 CDEHMERVKAHTNATSCSCYILNKPVFITMDGAMRNTAELFLPDSFMQEIIGGGNISGAH 474
Query: 473 DDRPVLTKSAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDD 532
D PV TK+A +RFLLYRPST N +M+ LYVYVDPAFT N ASGTG+AVVGRYR +
Sbjct: 475 RDEPVFTKTAQDRFLLYRPSTVANQDIMSNNLYVYVDPAFTTNAMASGTGVAVVGRYRSN 534
Query: 533 FIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAI 592
+I+F LEHFFL ALTGS+ IARCV LA+V A+H F SVR+AVEGNSSQD+AVAI
Sbjct: 535 WIVFGLEHFFLSALTGSSAELIARCVAQCLAKVFAIHSRPFDSVRIAVEGNSSQDAAVAI 594
Query: 593 ATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNS 652
AT++ E++ + + + PG +LFYHC PPG +V YPFFLL KQKT AF++FIK FNS
Sbjct: 595 ATNIQLELNTLRQADVVHMPG-TVLFYHCTPPGSSVAYPFFLLQKQKTGAFDHFIKAFNS 653
Query: 653 GGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVI 712
G V+ASQEL+S TVRLQTDPVEYL Q+ NL E ++ ++ R+++GKRNGA+DD++VA++
Sbjct: 654 GLVLASQELISNTVRLQTDPVEYLLTQMKNLTEVITGTSETRVFTGKRNGASDDMLVALV 713
Query: 713 MAIYLAAPTGIPP 725
MA+Y+A+ +PP
Sbjct: 714 MAVYMAS---LPP 723
>gi|9626782|ref|NP_041054.1| DNA packaging protein [Equine
herpesvirus 1]
gi|139648|sp|P28969|VTER_HSVEB PROBABLE DNA PACKAGING PROTEIN
(TERMINASE)
gi|74015|pir||WZBEA1 DNA-packaging protein - equine herpesvirus 1
(strain Ab4p)
gi|330792|gb|AAB02480.1| DNA packaging protein
Length = 734
Score = 920 bits (2377), Expect = 0.0
Identities = 470/727 (64%), Positives = 566/727 (77%), Gaps = 6/727 (0%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLGG-DALRVPFLDFATATPKRHQTV 59
MFG+ L + QY E L ++ Q + G +A GG D + FL+FA TP+RHQTV
Sbjct: 1 MFGRVLGRETVQYFEALRREVQARRGAKNRAAEAQNGGEDDAKTAFLNFAIPTPQRHQTV 60
Query: 60 VPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLEFLAPELVRAVAR 119
VPGVGTLHDCCE + +F++VARRLLF SL Q D + ++ P++ +A+
Sbjct: 61 VPGVGTLHDCCETAQIFASVARRLLFRSLSKWQSGEARERLDPASVEAYVDPKVRQALKT 120
Query: 120 LRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLAET 179
+ F E + ++A RNAYYS++NTF AL S+AF Q+ FV F++L+ TSF + L
Sbjct: 121 ISFVEYSDDEARSCRNAYYSIMNTFDALRSSDAFHQVASFVARFSRLVDTSFNGADLDGD 180
Query: 180 TGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIP 239
KRA+VDV T+G+ GTLELFQKMILMHATYF+AAV+LGDHA+++ FL++VF P
Sbjct: 181 GQQASKRARVDVPTYGKQRGTLELFQKMILMHATYFIAAVILGDHADRIGAFLKMVFNTP 240
Query: 240 LFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFD 299
FSD +RHFRQRATVFLVPRRHGKTWFLVPLIAL+LA+F+GIKIGYTAHIRKATEPVFD
Sbjct: 241 EFSDATIRHFRQRATVFLVPRRHGKTWFLVPLIALALATFKGIKIGYTAHIRKATEPVFD 300
Query: 300 EIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEAN 359
EI A LR WFG+S VDHVKGE ISFSFPDGS+STIVFASSHNTNGIRGQDFNLLFVDEAN
Sbjct: 301 EIGARLRQWFGNSPVDHVKGENISFSFPDGSKSTIVFASSHNTNGIRGQDFNLLFVDEAN 360
Query: 360 FIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMP 419
FIRP+AVQTI+GFLNQ NCKIIFVSSTNTGKASTSFLYNL+GAAD+LLNVVTYICD+HM
Sbjct: 361 FIRPEAVQTIIGFLNQTNCKIIFVSSTNTGKASTSFLYNLKGAADDLLNVVTYICDEHME 420
Query: 420 RVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEII-GGQARETGDDRPVL 478
RV HTNATACSCYILNKPVFITMDGA+R TA+LFLPDSFMQEII GG D PV
Sbjct: 421 RVKAHTNATACSCYILNKPVFITMDGAMRNTAELFLPDSFMQEIIGGGNVSGAHRDEPVF 480
Query: 479 TKSAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDFIIFAL 538
TK+A +RFLLYRPST N +M+ +LYVYVDPAFT N ASGTG+AVVGRYR ++++F +
Sbjct: 481 TKTAQDRFLLYRPSTVANQDIMSSDLYVYVDPAFTTNAMASGTGVAVVGRYRSNWVVFGM 540
Query: 539 EHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHT 598
EHFFL ALTGS+ IARCV LAQV A+H F SVRVAVEGNSSQD+AVAIAT++
Sbjct: 541 EHFFLSALTGSSAELIARCVAQCLAQVFAIHKRPFDSVRVAVEGNSSQDAAVAIATNIQL 600
Query: 599 EMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMAS 658
E++ + + PG +LFYHC P G +V YPFFLL KQKT AF++FIK FNSG V+AS
Sbjct: 601 ELNTLRRADVVPMPG-AVLFYHCTPHGSSVAYPFFLLQKQKTGAFDHFIKAFNSGSVLAS 659
Query: 659 QELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLA 718
QELVS TVRLQTDPVEYL Q+ NL E V+ ++ R+++GKRNGA+DD++VA++MA+YL+
Sbjct: 660 QELVSNTVRLQTDPVEYLLTQMKNLTEVVTGTSETRVFTGKRNGASDDMLVALVMAVYLS 719
Query: 719 APTGIPP 725
+ +PP
Sbjct: 720 S---LPP 723
>gi|9625919|ref|NP_040165.1| DNA packaging protein [Human
herpesvirus 3]
gi|139650|sp|P09294|VTER_VZVD Probable DNA packaging protein
gi|74014|pir||WZBE45 gene 45 protein - human herpesvirus 3
gi|5869808|emb|CAB55553.1| unnamed protein product [Human
herpesvirus 3]
Length = 747
Score = 870 bits (2249), Expect = 0.0
Identities = 441/752 (58%), Positives = 564/752 (74%), Gaps = 32/752 (4%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLG----GDALRVPFLDFATATPKRH 56
MFG+ L + +Y ERL+++R ++ G E+ + G+A ++PFL+FA +RH
Sbjct: 5 MFGRTLGEESVRYFERLKRRRDERFGTLESPTPCSTRQGSLGNATQIPFLNFAIDVTRRH 64
Query: 57 QTVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLEF-------- 108
Q V+PG+GTLH+CCE+ PLFSA ARR +F + + + G + T +
Sbjct: 65 QAVIPGIGTLHNCCEYIPLFSATARRAMFGAFLSST------GYNCTPNVVLKPWRYSVN 118
Query: 109 --LAPELVRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQL 166
++PEL +AV+ ++F E +PE+A P RNAY V+NTF+A S++F QL F + F+ L
Sbjct: 119 ANVSPELKKAVSSVQFYEYSPEEAAPHRNAYSGVMNTFRAFSLSDSFCQLSTFTQRFSYL 178
Query: 167 LKTSFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAE 226
++TSF + E G KRAKVDV +G+ GTLELFQKMILMH T+F+++VLLGDHA+
Sbjct: 179 VETSFES---IEECGSHGKRAKVDVPIYGRYKGTLELFQKMILMHTTHFISSVLLGDHAD 235
Query: 227 QVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGY 286
+V+ FLR VF P SD+ + HF+Q++TVFLVPRRHGKTWFLVPLIAL +A+FRGIK+GY
Sbjct: 236 RVDCFLRTVFNTPSVSDSVLEHFKQKSTVFLVPRRHGKTWFLVPLIALVMATFRGIKVGY 295
Query: 287 TAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIR 346
TAHIRKATEPVF+ I + L WFG++ VDHVKGE+I+FSF DGS ST VFASSHNTNGIR
Sbjct: 296 TAHIRKATEPVFEGIKSRLEQWFGANYVDHVKGESITFSFTDGSYSTAVFASSHNTNGIR 355
Query: 347 GQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADEL 406
GQDFNLLFVDEANFIRPDAVQTI+GFLNQ NCKIIFVSSTNTGKASTSFLYNLRG++D+L
Sbjct: 356 GQDFNLLFVDEANFIRPDAVQTIVGFLNQTNCKIIFVSSTNTGKASTSFLYNLRGSSDQL 415
Query: 407 LNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGG 466
LNVVTY+CDDHMPRV+ H++ TACSCY+LNKPVFITMDGA+RRTADLF+ DSF+QEI+GG
Sbjct: 416 LNVVTYVCDDHMPRVLAHSDVTACSCYVLNKPVFITMDGAMRRTADLFMADSFVQEIVGG 475
Query: 467 QARETGD---DRPVLTKSAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGI 523
+ + +G DRP+ TK+A ERF+LYRPST N +++ LYVYVDPAFT+NTRASGTG+
Sbjct: 476 RKQNSGGVGFDRPLFTKTARERFILYRPSTVANCAILSSVLYVYVDPAFTSNTRASGTGV 535
Query: 524 AVVGRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGN 583
A+VGRY+ D+IIF LEHFFLRALTG++ ++I RCV L +LALHP F +V V++EGN
Sbjct: 536 AIVGRYKSDWIIFGLEHFFLRALTGTSSSEIGRCVTQCLGHILALHPNTFTNVHVSIEGN 595
Query: 584 SSQDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAF 643
SSQDSAVAI+ + + +L P LLFYH PPG +V YPFFLL KQKTPA
Sbjct: 596 SSQDSAVAISLAI-AQQFAVLEKGNVLSSAPVLLFYHSIPPGCSVAYPFFLLQKQKTPAV 654
Query: 644 EYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVS---PNTDVRMYSGK- 699
+YF+K+FNSG ++ASQELVS+TV+L DPVEYL +QL+NL E + N D + Y+GK
Sbjct: 655 DYFVKRFNSGNIIASQELVSLTVKLGVDPVEYLCKQLDNLTEVIKGGMGNLDTKTYTGKG 714
Query: 700 -RNGAADDLMVAVIMAIYLAAPTGIPPAFFPI 730
+DDLMVA+IM++Y+ + F PI
Sbjct: 715 TTGTMSDDLMVALIMSVYIGSSCIPDSVFMPI 746
>gi|9629858|ref|NP_045342.1| UL15 protein [Bovine herpesvirus 1]
gi|7444329|pir||S61238 hypothetical protein - bovine herpesvirus 1
gi|971317|emb|CAA88116.1| unnamed protein product [Bovine
herpesvirus 1]
gi|2653331|emb|CAA06117.1| UL15 protein [Bovine herpesvirus type
1.1]
Length = 735
Score = 854 bits (2207), Expect = 0.0
Identities = 453/736 (61%), Positives = 540/736 (72%), Gaps = 14/736 (1%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKV---GVDEASAGLTLGGDALRVPFLDFATATPKRHQ 57
MFG + +Y +RL ++RQ++ G G G D RVPFLDFA A PKRHQ
Sbjct: 1 MFGGAVGEQSARYFQRLLRERQRRAAERGARPDGGGGARGEDDARVPFLDFAVAAPKRHQ 60
Query: 58 TVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLE-FLAPELVRA 116
TVVPGVGTLH CE +PLF+A A RLL S+ A+ G +T E ++ EL
Sbjct: 61 TVVPGVGTLHGYCELAPLFAATASRLLLTSMARAE------AGLNTGTGEAHVSRELAGV 114
Query: 117 VARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSL 176
++ LRF P +A NAY+SV+ +++ S AF Q+ FV F++L+ TSF
Sbjct: 115 LSALRFAAHPPAEAAAHCNAYHSVMAALESMRASGAFAQVAAFVARFSRLVGTSFSHLGG 174
Query: 177 AETTGPPK-KRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLV 235
+ PP+ KRA+V+ + GQT G LELFQKMILM ATYF+AA LLG+HAE++ FLR+
Sbjct: 175 GDDADPPRAKRARVEPPS-GQTRGALELFQKMILMPATYFVAATLLGEHAERIGAFLRVA 233
Query: 236 FEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATE 295
F P FSD AV HFRQRATVFLVPRRHGKTWFLVPLIAL+LA+F+GIKIGYTAHIRKATE
Sbjct: 234 FNTPDFSDAAVAHFRQRATVFLVPRRHGKTWFLVPLIALALATFKGIKIGYTAHIRKATE 293
Query: 296 PVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFV 355
PVF+EI A LR WFG RVDHVKGE ISFSFPDG+RSTIVFASSHNTNGIRGQDFNLLFV
Sbjct: 294 PVFEEIVARLRQWFGGERVDHVKGEVISFSFPDGARSTIVFASSHNTNGIRGQDFNLLFV 353
Query: 356 DEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICD 415
DEANFIRP+AVQTI+GFLNQA+CKIIFVSSTNTGKASTSFLYNL+GA+D LLNVVTYIC+
Sbjct: 354 DEANFIRPEAVQTIVGFLNQASCKIIFVSSTNTGKASTSFLYNLKGASDGLLNVVTYICN 413
Query: 416 DHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEII-GGQARETGDD 474
+H PRV H ATACSCY+LNKPVFITMD A R TA+ FLP+SFMQEII GG+ +
Sbjct: 414 EHTPRVAAHGGATACSCYVLNKPVFITMDAAARNTAETFLPNSFMQEIIGGGEVARRAEP 473
Query: 475 RPVLTKSAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDFI 534
V T++AGE+FLLYRPST G LY+Y+DPAFT+N RASG+GIAVVGR+R ++
Sbjct: 474 AAVFTRAAGEQFLLYRPSTAAARGPWPERLYMYIDPAFTSNARASGSGIAVVGRHRGSWL 533
Query: 535 IFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIAT 594
+ LEHFFL ALTGS+ A+IARC V AQV+A+H + VAVEGNSSQDSAVAIA
Sbjct: 534 VLGLEHFFLPALTGSSAAEIARCAVRCFAQVMAVHRRRLDGLFVAVEGNSSQDSAVAIAL 593
Query: 595 HVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGG 654
V E+ + AS P E FYHC PPG AV YPFFLL KQKT AF++FI+ FNSG
Sbjct: 594 GVRRELDSLAASGAVPMPA-ETRFYHCRPPGSAVAYPFFLLQKQKTAAFDHFIRLFNSGR 652
Query: 655 VMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMA 714
V+ASQ+L S+TVRLQTDPVEYL EQL NL E+ + R +SGKR GAADDLMVA++MA
Sbjct: 653 VVASQDLASLTVRLQTDPVEYLFEQLQNLTESTAGPGGARAFSGKRRGAADDLMVALVMA 712
Query: 715 IYLAAPTGIPPAFFPI 730
+++ + AF P+
Sbjct: 713 VFVGSLPPTDGAFCPL 728
>gi|10834884|ref|NP_066845.1| UL15 protein [Gallid herpesvirus 3]
gi|5689285|dbj|BAA82909.1| UL15 product homolog [Marek's disease
virus serotype 2 MDV2]
gi|10799978|dbj|BAB16523.1| UL15 protein [Gallid herpesvirus 3]
Length = 748
Score = 852 bits (2200), Expect = 0.0
Identities = 431/728 (59%), Positives = 540/728 (73%), Gaps = 12/728 (1%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLGGDALRVPFLDFATATPKRHQTVV 60
MFG L +++ ERL + R +++G + L GG + PFL+FA + P+RHQTV+
Sbjct: 1 MFGGALGESAKKHFERLLRDRNERLGASRKNECLARGGSLVDAPFLNFAISVPRRHQTVM 60
Query: 61 PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQ---LRGRDFGGDHTAKLE---FLAPELV 114
P VGTLHDCC+ + ++SA+A RLL+ +V ++ +R H +K LAP L
Sbjct: 61 PAVGTLHDCCDGTGIYSAIATRLLYAGIVSSEFGEVRRESLSNGHISKRNREALLAPTLT 120
Query: 115 RAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRAS 174
R + F E RNAYYS +NTF ++ S+AF+QL F+ F++LL SF+
Sbjct: 121 RVANSITFHEYDDAQCAAHRNAYYSTMNTFGSMRTSDAFQQLASFIDRFSKLLAASFKDV 180
Query: 175 SLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRL 234
++ + PK RA++ ++ + +GTLELFQKMILMHATYFL +VLL DHAE+ LR+
Sbjct: 181 NILDRNNAPK-RARITAPSYDKPHGTLELFQKMILMHATYFLTSVLLEDHAERAERLLRV 239
Query: 235 VFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKAT 294
+F+IP FSD A RHFRQRATVFLVPRRHGKTWFLVPLIAL+++SF GI+IGYT+HIRKA
Sbjct: 240 IFDIPDFSDAATRHFRQRATVFLVPRRHGKTWFLVPLIALAMSSFEGIRIGYTSHIRKAI 299
Query: 295 EPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLF 354
EPVF+EI LR WFG+ VDHVKGETI+FSFP GSRST+ FASSHNTN IRGQDFNLLF
Sbjct: 300 EPVFEEIGDRLRRWFGTQCVDHVKGETITFSFPSGSRSTVTFASSHNTNSIRGQDFNLLF 359
Query: 355 VDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYIC 414
VDEANFIRPDAVQTI+GFLNQANCKIIFVSSTN+GKASTSFLY L+G+AD+LLNVVTYIC
Sbjct: 360 VDEANFIRPDAVQTIIGFLNQANCKIIFVSSTNSGKASTSFLYGLKGSADDLLNVVTYIC 419
Query: 415 DDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETG-- 472
D+HM V +TNAT+CSCY+LNKPVFITMDGA+RRTA++FLPDSFM+EIIGG +
Sbjct: 420 DEHMKHVTNYTNATSCSCYVLNKPVFITMDGAMRRTAEMFLPDSFMKEIIGGITMDRNTC 479
Query: 473 -DDRPVLTKSAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRD 531
DR V T SA ER LLYRPST N +++ +LYVYVDPAFTANTRASGTGIAV+GRY
Sbjct: 480 QGDRGVFTASAVERLLLYRPSTVRNQDILSRDLYVYVDPAFTANTRASGTGIAVIGRYGA 539
Query: 532 DFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVA 591
D+IIF LEHFFLRALTG + I C +AQ+ A+H F ++RVAVEGNS+QDSAVA
Sbjct: 540 DYIIFGLEHFFLRALTGESADAIGECAAQCIAQICAIHCERFGTIRVAVEGNSNQDSAVA 599
Query: 592 IATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFN 651
IAT + ++ + S A P ++ FYH +P G V YPFFLL +QKT AF++FI +FN
Sbjct: 600 IATRISIDLASYVQSGVAPAP-HDVCFYHSKPAGSNVEYPFFLLQRQKTAAFDFFIARFN 658
Query: 652 SGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAV 711
SG V+ASQ+LVS T+ L TDPVEYL++QL NL E V+ T R +SGK+ G DD +VA+
Sbjct: 659 SGRVLASQDLVSTTISLSTDPVEYLTKQLTNLSEVVTGATGTRTFSGKK-GGYDDTVVAL 717
Query: 712 IMAIYLAA 719
+MA+Y++A
Sbjct: 718 VMAVYISA 725
>gi|13242438|ref|NP_077457.1| unknown [Cercopithecine herpesvirus 7]
gi|11036590|gb|AAG27219.1|AF275348_40 unknown [Cercopithecine
herpesvirus 7]
Length = 745
Score = 849 bits (2194), Expect = 0.0
Identities = 440/747 (58%), Positives = 546/747 (72%), Gaps = 20/747 (2%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEA--SAGLTLGGDALRVPFLDFATATPKRHQT 58
MFG ++ +Y +RL++Q+ +K G E+ SA L + RV FL+FA +RHQT
Sbjct: 1 MFGNKVGEQCIKYFQRLKRQQDEKFGAVESNISADSVLIQNVTRVSFLNFAIEVAQRHQT 60
Query: 59 VVPGVGTLHDCCEHSPLFSAVARRLLFNSL---------VPAQLRGRDFGGDHTAKLEFL 109
V+PGVGTLH CCE+ P+F+++AR+L++ ++ L R+ D L F
Sbjct: 61 VIPGVGTLHGCCEYVPIFTSLARQLMYTNVNRKKANKDGTGKNLHEREENIDVNRNLIFT 120
Query: 110 APELVRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKT 169
EL +V L F E PE+A P RNAY V+NT A + SE F QL F+ F+ LL+T
Sbjct: 121 R-ELTSSVHSLHFYEYTPEEAAPHRNAYSGVMNTLNAFYTSERFTQLNMFINRFSYLLRT 179
Query: 170 SFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVN 229
SF E KRAK+DV +G+ GTLELFQKM+LMHATYF+A+VLLGDH E+V
Sbjct: 180 SFEDIEFRENG--VCKRAKIDVPVYGRHRGTLELFQKMMLMHATYFIASVLLGDHIERVE 237
Query: 230 TFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAH 289
FL VF+IP+ S F+QR+TVFLVPRRHGKTWF+V LIAL +++FRGIK+GYTAH
Sbjct: 238 GFLSTVFDIPICSSEIALQFKQRSTVFLVPRRHGKTWFIVSLIALLMSTFRGIKVGYTAH 297
Query: 290 IRKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQD 349
IRKATEPVF+EI A L WFG+ R++HVKGE+I+FSF DG ST VF+SSHNTNGIRGQ
Sbjct: 298 IRKATEPVFEEIKARLEQWFGTERIEHVKGESITFSFSDGCCSTAVFSSSHNTNGIRGQT 357
Query: 350 FNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNV 409
FNLLFVDEANFIRPDAVQTI+GFLNQ NCKIIFVSSTNTGKASTSFLYNLR ++D LLNV
Sbjct: 358 FNLLFVDEANFIRPDAVQTIVGFLNQTNCKIIFVSSTNTGKASTSFLYNLRNSSDRLLNV 417
Query: 410 VTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQAR 469
VTY+CDDHM RV+TH + TACSCY+LNKPVFITMDG+VR+TADLF+ DSFMQE++GG R
Sbjct: 418 VTYVCDDHMSRVLTHNDITACSCYVLNKPVFITMDGSVRQTADLFMADSFMQELVGGHKR 477
Query: 470 ETGDDRPV--LTKSAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVG 527
+ + P+ TK+A +RF+LYRPST N +AP LY+Y+DPAFT N +ASGTG+A+VG
Sbjct: 478 DPDSELPIPLFTKTAMDRFVLYRPSTVLNCERLAPTLYIYIDPAFTTNVKASGTGVAIVG 537
Query: 528 RYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQD 587
RY+ DFIIF LEHF+LRALTG++ +I RCVV LA VLALHP F SV +AVEGNSSQD
Sbjct: 538 RYKLDFIIFGLEHFYLRALTGTSSNEIGRCVVQCLAHVLALHPSTFSSVCIAVEGNSSQD 597
Query: 588 SAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFI 647
SAVAI T + + + S P LLFYHC PPG V YPFFLL KQKT A +YF+
Sbjct: 598 SAVAIVTCIIQQYRDLEQSDVLQFTLPSLLFYHCIPPGSQVAYPFFLLQKQKTLAVDYFV 657
Query: 648 KKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNT-DVRMYSGKRNGA-AD 705
K+FNSG ++ASQE+VS+TVRL TDPV+YL +QLNNL E V P D R Y+GK NG+ +D
Sbjct: 658 KRFNSGNIIASQEIVSLTVRLGTDPVDYLCKQLNNLTELVKPGAPDRRSYTGKCNGSMSD 717
Query: 706 DLMVAVIMAIYLAA--PTGIPPAFFPI 730
D+MVA++MA+Y+ + P + PI
Sbjct: 718 DMMVALLMAVYIGGMETSEFSPLYKPI 744
>gi|12084843|ref|NP_073308.1| UL15 DNA packaging protein (terminase)
[Meleagrid herpesvirus 1]
gi|12025126|gb|AAG45752.1|AF291866_19 UL15 DNA packaging protein
(terminase) [Meleagrid herpesvirus 1]
Length = 738
Score = 817 bits (2111), Expect = 0.0
Identities = 419/731 (57%), Positives = 531/731 (72%), Gaps = 20/731 (2%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLGGDALRVPFLDFATATPKRHQTVV 60
MFG QL S+ +++ E+L ++R ++G GD + PFL+FA P+RHQTV+
Sbjct: 1 MFGGQLGSETRRHFEKLLRERNNRLGAAGRPEKNLRNGDIIDAPFLNFAIPIPRRHQTVI 60
Query: 61 PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQL---------RGRDFGGDHTAKLEFLAP 111
P +G LHD C+ + ++S VA R+L+ ++V ++ GR + A FL+P
Sbjct: 61 PAIGILHDSCDSAGIYSDVAARMLYTNMVYSEFDRANNESPSSGRSLVKEAGA---FLSP 117
Query: 112 ELVRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSF 171
+++ + L+F+E + RNAYYSV+N+F + S+AF+QLV F+ FA+LL SF
Sbjct: 118 KMIDCASALKFKEYDDTECASHRNAYYSVMNSFVVMRTSDAFKQLVSFMDRFARLLSASF 177
Query: 172 RASSLAETTGPPK-KRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNT 230
R + + G P KR K+D+ +G+T+GTLELFQKMILMHATYF+ +VLLGDH E+
Sbjct: 178 R--DVKDLDGKPTDKRMKIDIPPYGKTHGTLELFQKMILMHATYFVTSVLLGDHTERAER 235
Query: 231 FLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHI 290
LR+ F+ P FSD A RHFRQR +VFLVPRRHGKTWFLVPLIAL++ASF GI+IGYT+HI
Sbjct: 236 LLRIAFDTPNFSDAATRHFRQRVSVFLVPRRHGKTWFLVPLIALAMASFEGIRIGYTSHI 295
Query: 291 RKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDF 350
RKA EPVF+EI LR WFG RVDHVKGETI+FSFP GSRST+ FASSHNTN IRGQDF
Sbjct: 296 RKAIEPVFEEIGDRLRKWFGGHRVDHVKGETITFSFPSGSRSTVTFASSHNTNSIRGQDF 355
Query: 351 NLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVV 410
NLLFVDEANFIRPDAVQTI+GFLNQ+NCKIIFVSSTN+GKASTSFLY L+G+AD LLNVV
Sbjct: 356 NLLFVDEANFIRPDAVQTIIGFLNQSNCKIIFVSSTNSGKASTSFLYGLKGSADALLNVV 415
Query: 411 TYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGG---Q 467
TYICD+H+ V +TNAT+CSCY+LNKPVFITMDG +RRTA+ FLPDSFMQEIIGG
Sbjct: 416 TYICDEHIKHVTDYTNATSCSCYVLNKPVFITMDGTMRRTAEKFLPDSFMQEIIGGGDIH 475
Query: 468 ARETGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVG 527
DR + T SA +RFL+YRPST P+LYVYVDPAFTAN +ASGTG+AV+G
Sbjct: 476 KITCSGDRGIFTSSAIDRFLIYRPSTVHCQTNTYPDLYVYVDPAFTANAKASGTGVAVIG 535
Query: 528 RYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQD 587
R D+I+F LEHFFLRALTG + I CV + Q+ A+H FR +++AVEGNS+QD
Sbjct: 536 RSGLDYILFGLEHFFLRALTGDSVDAIGDCVAQCIIQICAIHTKRFRMIKIAVEGNSNQD 595
Query: 588 SAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFI 647
SAVAIAT + E+ + S A P + FYH P G V YPFFLL +QKT AF++FI
Sbjct: 596 SAVAIATRIALELTSYIKSGVAPTP-HDFSFYHSSPAGTDVAYPFFLLQRQKTAAFDFFI 654
Query: 648 KKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDL 707
+FNSG V+ASQ++VS TV L DPVEYL++QL NL E V+ + R +SGK+ G +DD
Sbjct: 655 AQFNSGRVLASQDIVSTTVSLNMDPVEYLTKQLVNLSEVVTGSACNRTFSGKK-GGSDDT 713
Query: 708 MVAVIMAIYLA 718
+VA+ MA+Y++
Sbjct: 714 LVALTMAVYIS 724
>gi|11095847|gb|AAG30054.1|AF282130_17 UL15 terminase [Meleagrid
herpesvirus 1]
Length = 738
Score = 816 bits (2108), Expect = 0.0
Identities = 419/731 (57%), Positives = 530/731 (72%), Gaps = 20/731 (2%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLGGDALRVPFLDFATATPKRHQTVV 60
MFG QL S+ +++ E+L ++R ++G GD + PFL+FA P+RHQTV+
Sbjct: 1 MFGGQLGSETRRHFEKLLRERNNRLGAAGRPEKNLRNGDIIDAPFLNFAIPIPRRHQTVI 60
Query: 61 PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQL---------RGRDFGGDHTAKLEFLAP 111
P +G LHD C+ + ++S VA R+L+ ++V ++ GR + A FL+P
Sbjct: 61 PAIGILHDSCDSAGIYSDVAARMLYTNMVYSEFDRANNESPSSGRSLVKEAGA---FLSP 117
Query: 112 ELVRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSF 171
+++ + L+F+E + RNAYYSV+N+F + S+AF+QLV F+ FA+LL SF
Sbjct: 118 KMIDCASALKFKEYDDTECASHRNAYYSVMNSFVVMRTSDAFKQLVSFMDRFARLLSASF 177
Query: 172 RASSLAETTGPPK-KRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNT 230
R + + G P KR K+D+ +G+T+GTLELFQKMILMHATYF+ +VLLGDH E+
Sbjct: 178 R--DVKDLDGKPTDKRMKIDIPPYGKTHGTLELFQKMILMHATYFVTSVLLGDHTERAER 235
Query: 231 FLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHI 290
LR+ F+ P FSD A RHFRQR +VFLVPRRHGKTWFLVPLIAL +ASF GI+IGYT+HI
Sbjct: 236 LLRIAFDTPNFSDAATRHFRQRVSVFLVPRRHGKTWFLVPLIALVMASFEGIRIGYTSHI 295
Query: 291 RKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDF 350
RKA EPVF+EI LR WFG RVDHVKGETI+FSFP GSRST+ FASSHNTN IRGQDF
Sbjct: 296 RKAIEPVFEEIGDRLRKWFGGHRVDHVKGETITFSFPSGSRSTVTFASSHNTNSIRGQDF 355
Query: 351 NLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVV 410
NLLFVDEANFIRPDAVQTI+GFLNQ+NCKIIFVSSTN+GKASTSFLY L+G+AD LLNVV
Sbjct: 356 NLLFVDEANFIRPDAVQTIIGFLNQSNCKIIFVSSTNSGKASTSFLYGLKGSADALLNVV 415
Query: 411 TYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGG---Q 467
TYICD+H+ V +TNAT+CSCY+LNKPVFITMDG +RRTA+ FLPDSFMQEIIGG
Sbjct: 416 TYICDEHIKHVTDYTNATSCSCYVLNKPVFITMDGTMRRTAEKFLPDSFMQEIIGGGDIH 475
Query: 468 ARETGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVG 527
DR + T SA +RFL+YRPST P+LYVYVDPAFTAN +ASGTG+AV+G
Sbjct: 476 KITCSGDRGIFTSSAIDRFLIYRPSTVHCQTNTYPDLYVYVDPAFTANAKASGTGVAVIG 535
Query: 528 RYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQD 587
R D+I+F LEHFFLRALTG + I CV + Q+ A+H FR +++AVEGNS+QD
Sbjct: 536 RSGLDYILFGLEHFFLRALTGDSVDAIGDCVAQCIIQICAIHTKRFRMIKIAVEGNSNQD 595
Query: 588 SAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFI 647
SAVAIAT + E+ + S A P + FYH P G V YPFFLL +QKT AF++FI
Sbjct: 596 SAVAIATRIALELTSYIKSGVAPTP-HDFSFYHSSPAGTDVAYPFFLLQRQKTAAFDFFI 654
Query: 648 KKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDL 707
+FNSG V+ASQ++VS TV L DPVEYL++QL NL E V+ + R +SGK+ G +DD
Sbjct: 655 AQFNSGRVLASQDIVSTTVSLNMDPVEYLTKQLVNLSEVVTGSACNRTFSGKK-GGSDDT 713
Query: 708 MVAVIMAIYLA 718
+VA+ MA+Y++
Sbjct: 714 LVALTMAVYIS 724
>gi|10180719|gb|AAG14207.1|AF243438_22 UL15 DNA packaging
protein-like protein [Gallid herpesvirus 2]
Length = 737
Score = 810 bits (2093), Expect = 0.0
Identities = 420/741 (56%), Positives = 540/741 (72%), Gaps = 17/741 (2%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLGGDALRVPFLDFATATPKRHQTVV 60
MFG L + +++ ERL K + ++G + GD + PFL+FA P+RHQTV+
Sbjct: 1 MFGGLLGEETKRHFERLMKTKNDRLGASHRNERSIRDGDMVDAPFLNFAIPVPRRHQTVM 60
Query: 61 PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQ---LRGRDFGGDH---TAKLEFLAPELV 114
P +G LH+CC+ ++SA+ R+L++S+ ++ LR + T FL+P ++
Sbjct: 61 PAIGILHNCCDSLGIYSAITTRMLYSSIACSEFDELRRDSVPRCYPRITNAQAFLSPMMM 120
Query: 115 RAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFR-A 173
R + F+E + RNAYYS +N+F ++ S+AF+QL F+ F++LL SFR
Sbjct: 121 RVANSIIFQEYDEMECAAHRNAYYSTMNSFISMRTSDAFKQLTVFISRFSKLLIASFRDV 180
Query: 174 SSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLR 233
+ L + T KKRA++D ++ + +GTLELFQKMILMHATYF+ +VLLGDHAE+ LR
Sbjct: 181 NKLDDHT--VKKRARIDAPSYDKLHGTLELFQKMILMHATYFVTSVLLGDHAERAERLLR 238
Query: 234 LVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKA 293
+ F+ P FSD RHFRQRATVFLVPRRHGKTWFLVPLIAL+++SF GI+IGYT+HIRKA
Sbjct: 239 VAFDTPHFSDIVTRHFRQRATVFLVPRRHGKTWFLVPLIALAMSSFEGIRIGYTSHIRKA 298
Query: 294 TEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLL 353
EPVF++I LR WFG+ RVDHVKGETI+FSFP G +ST+ FASSHNTN IRGQDFNLL
Sbjct: 299 IEPVFEDIGDRLRRWFGAHRVDHVKGETITFSFPSGLKSTVTFASSHNTNSIRGQDFNLL 358
Query: 354 FVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYI 413
FVDEANFIRPDAVQTI+GFLNQA CKIIFVSSTN+GKASTSFLY L+G+AD+LLNVVTYI
Sbjct: 359 FVDEANFIRPDAVQTIIGFLNQATCKIIFVSSTNSGKASTSFLYGLKGSADDLLNVVTYI 418
Query: 414 CDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARE--- 470
CD+HM V +TNAT+CSCY+LNKPVFITMDGA+RRTA++FLPDSFMQEIIGG +
Sbjct: 419 CDEHMKHVTDYTNATSCSCYVLNKPVFITMDGAMRRTAEMFLPDSFMQEIIGGGVVDRTI 478
Query: 471 TGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYR 530
DR + T SA +RFL+YRPST N + +LYVYVDPAFTANT+ASGTG+AV+G+Y
Sbjct: 479 CQGDRSIFTASAIDRFLIYRPSTVNNQDPFSQDLYVYVDPAFTANTKASGTGVAVIGKYG 538
Query: 531 DDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAV 590
D+I+F LEH+FLRALTG + I CV L Q+ A+H F +++A+EGNS+QDSAV
Sbjct: 539 TDYIVFGLEHYFLRALTGESSDSIGYCVAQCLIQICAIHRKRFGVIKIAIEGNSNQDSAV 598
Query: 591 AIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKF 650
AIAT + EM + +A A P + FYH + G V YP+FLL +QKT AF++FI +F
Sbjct: 599 AIATRIAIEMISYMKAAVAPTP-HNVSFYHSKSNGTDVEYPYFLLQRQKTTAFDFFIAQF 657
Query: 651 NSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVA 710
NSG V+ASQ+LVS TV L TDPVEYL++QL N+ E V+ T R +SGK+ G DD +VA
Sbjct: 658 NSGRVLASQDLVSTTVSLTTDPVEYLTKQLTNISEVVTGPTCTRTFSGKK-GGNDDTVVA 716
Query: 711 VIMAIYLAAPTGIPP-AFFPI 730
+ MA+Y++A IP AF PI
Sbjct: 717 LTMAVYISA--HIPDMAFAPI 735
>gi|9635112|ref|NP_057773.1| UL15 [Gallid herpesvirus 2]
gi|7673189|gb|AAF66813.1|AF147806_77 UL15 [Gallid herpesvirus 2]
Length = 737
Score = 770 bits (1988), Expect = 0.0
Identities = 405/741 (54%), Positives = 522/741 (69%), Gaps = 17/741 (2%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLGGDALRVPFLDFATATPKRHQTVV 60
MFG L + +++ ERL K + ++G + GD + PFL+FA P+RHQTV+
Sbjct: 1 MFGGLLGEETKRHFERLMKTKNDRLGASHRNERSIRDGDMVDAPFLNFAIPVPRRHQTVM 60
Query: 61 PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQ---LRGRDFGGDH---TAKLEFLAPELV 114
P +G LH+CC+ ++SA+ R+L++S+ ++ LR + T FL+P ++
Sbjct: 61 PAIGILHNCCDSLGIYSAITTRMLYSSIACSEFDELRRDSVPRCYPRITNAQAFLSPMMM 120
Query: 115 RAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFR-A 173
R + F+E + RNAYYS +N+F ++ S+AF+QL F+ F++LL SFR
Sbjct: 121 RVANSIIFQEYDEMECAAHRNAYYSTMNSFISMRTSDAFKQLTVFISRFSKLLIASFRDV 180
Query: 174 SSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLR 233
+ L + T KKRA++D ++ + +GTLELFQKMI F LR
Sbjct: 181 NKLDDHT--VKKRARIDAPSYDKLHGTLELFQKMIFDACHLFCNFCFTWRSRRASERLLR 238
Query: 234 LVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKA 293
+ F+ P FSD RHFRQRATVFLVPRRHGKTWFLVPLIAL+++SF GI+IGY +HIRKA
Sbjct: 239 VAFDTPHFSDIVTRHFRQRATVFLVPRRHGKTWFLVPLIALAMSSFEGIRIGYISHIRKA 298
Query: 294 TEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLL 353
EPVF++I LR WFG+ RVDHVKGETI+FSFP G +ST+ FASSHNTN IRGQDFNLL
Sbjct: 299 IEPVFEDIGDRLRRWFGAHRVDHVKGETITFSFPSGLKSTVTFASSHNTNSIRGQDFNLL 358
Query: 354 FVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYI 413
FVDEANFIRPDAVQTI+GFLNQA CKIIFVSSTN+GKASTSFLY L+G+AD+LLNVVTYI
Sbjct: 359 FVDEANFIRPDAVQTIIGFLNQATCKIIFVSSTNSGKASTSFLYGLKGSADDLLNVVTYI 418
Query: 414 CDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARE--- 470
CD+HM V +TNAT+CSCY+LNKPVFITMDGA+RRTA++FLPDSFMQEIIGG +
Sbjct: 419 CDEHMKHVTDYTNATSCSCYVLNKPVFITMDGAMRRTAEMFLPDSFMQEIIGGGVVDRTI 478
Query: 471 TGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYR 530
DR + T SA +RFL+YRPST N + +LYVYVDPAFTANT+ASGTG+AV+G+Y
Sbjct: 479 CQGDRSIFTASAIDRFLIYRPSTVNNQDPFSQDLYVYVDPAFTANTKASGTGVAVIGKYG 538
Query: 531 DDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAV 590
D+I+F LEH+FLRALTG + I CV L Q+ A+H F +++A+EGNS+QDSAV
Sbjct: 539 TDYIVFGLEHYFLRALTGESSGSIGYCVAQCLIQICAIHRKRFGVIKIAIEGNSNQDSAV 598
Query: 591 AIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKF 650
AIAT + EM + +A A P + FYH + G V YP+FLL +QKT AF++FI +F
Sbjct: 599 AIATRIAIEMISYMKAAVAPTP-HNVSFYHSKSNGTDVEYPYFLLQRQKTTAFDFFIAQF 657
Query: 651 NSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVA 710
NSG V+ASQ+LVS TV L TDPVEYL++QL N+ E V+ T R +SGK+ G DD +VA
Sbjct: 658 NSGRVLASQDLVSTTVSLTTDPVEYLTKQLTNISEVVTGPTCTRTFSGKK-GGNDDTVVA 716
Query: 711 VIMAIYLAAPTGIPP-AFFPI 730
+ MA+Y++A IP AF PI
Sbjct: 717 LTMAVYISA--HIPDMAFAPI 735
>gi|28395422|gb|AAO38880.1| UL15 [Pseudorabies virus]
Length = 753
Score = 723 bits (1866), Expect = 0.0
Identities = 370/529 (69%), Positives = 431/529 (80%), Gaps = 10/529 (1%)
Query: 199 GTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLV 258
GTLELFQKMILMHA YFLA VLLGDHAE+ +L F+ PLFS+ AVRHFRQR TVFLV
Sbjct: 229 GTLELFQKMILMHAVYFLATVLLGDHAERATAYLLAAFDTPLFSEDAVRHFRQRVTVFLV 288
Query: 259 PRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVK 318
PRRHGKTWFLVPLIAL+LA+FRGI++GYTAHIRKATEPVF+EI A LR W +RVDHVK
Sbjct: 289 PRRHGKTWFLVPLIALALATFRGIRVGYTAHIRKATEPVFEEIHARLRRWCRDARVDHVK 348
Query: 319 GETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANC 378
GE I+ +FPDG+RSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTI+GF+NQA+C
Sbjct: 349 GENITVTFPDGARSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTILGFMNQASC 408
Query: 379 KIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKP 438
KIIFVSSTNTGKASTSFL NLRG ++LNVVTY+CD+HM RVV HT+ATACSCY+LNKP
Sbjct: 409 KIIFVSSTNTGKASTSFLTNLRGT--DMLNVVTYVCDEHMRRVVAHTDATACSCYVLNKP 466
Query: 439 VFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNSG 498
VFITMD A R TA+ LPDSFMQEI+GG + PVLT++AGERFLLYRPS+ N
Sbjct: 467 VFITMDAATRTTAERLLPDSFMQEILGGAV--AAREAPVLTRAAGERFLLYRPSSVANRR 524
Query: 499 LMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDFIIFALEHFFLRALTGSAPADIARCV 558
L+A L+VYVDPAFTAN RA GTG+AVVG YR +I+ LEHFFLRALTG++ +IARCV
Sbjct: 525 LLAGTLHVYVDPAFTANARAFGTGVAVVGSYRRSWIVLGLEHFFLRALTGASADEIARCV 584
Query: 559 VHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGPGPELLF 618
V LA+VLALH GAF +VRVAVEGNSSQDSAVAI + E+ + A+ P ++F
Sbjct: 585 VRCLARVLALHDGAFSAVRVAVEGNSSQDSAVAIVGAMRRELAELRAARVV--ADPAVVF 642
Query: 619 YHCEPPG---GAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPVEY 675
YH PG GAV YPFFLL KQKTPAF++F+K+FNSG VMASQELVSVTV + DPVEY
Sbjct: 643 YHHGAPGAGAGAVRYPFFLLQKQKTPAFDFFVKQFNSGAVMASQELVSVTVGARADPVEY 702
Query: 676 LSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAA-PTGI 723
L+ QL NL+ET S + R+++GKR G ADDL VA++MA++L+ P G+
Sbjct: 703 LNAQLGNLVETASGAGEHRVFTGKRGGCADDLAVALVMAVHLSTLPDGL 751
Score = 89.7 bits (221), Expect = 2e-16
Identities = 56/133 (42%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
Query: 45 FLDFATATPKRHQTVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTA 104
F +FA A P+RHQTVVP VGTLH+CCE + +F+ +AR LF RGR
Sbjct: 32 FFNFAIAAPQRHQTVVPAVGTLHNCCESARIFAGLARAALFGG-----ARGR-------- 78
Query: 105 KLEFLAPELVRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFA 164
+ P L RA L F E RNAY S + A+ S AFRQL FV FA
Sbjct: 79 --AAVDPALARAAEALEFAAYDGERLAFHRNAYTSAMAAVDAMRSSGAFRQLRRFVNRFA 136
Query: 165 QLLKTSFRASSLA 177
L + SFR ++ A
Sbjct: 137 LLSRRSFRDAATA 149
>gi|74013|pir||WMBE31 38K protein - human herpesvirus 1
gi|59847|emb|CAA27456.1| unnamed protein product [Human herpesvirus
1]
Length = 344
Score = 665 bits (1717), Expect = 0.0
Identities = 331/343 (96%), Positives = 337/343 (97%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEASAGLTLGGDALRVPFLDFATATPKRHQTVV 60
MFGQQLASDVQQYLERLEKQRQ KVG DEASAGLT+GGDALRVPFLDFATATPKRHQTVV
Sbjct: 1 MFGQQLASDVQQYLERLEKQRQLKVGADEASAGLTMGGDALRVPFLDFATATPKRHQTVV 60
Query: 61 PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLEFLAPELVRAVARL 120
PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQL+GRDFGGDHTAKLEFLAPELVRAVARL
Sbjct: 61 PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLKGRDFGGDHTAKLEFLAPELVRAVARL 120
Query: 121 RFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLAETT 180
RF+ECAP D VPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSL ETT
Sbjct: 121 RFKECAPADVVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLTETT 180
Query: 181 GPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPL 240
GPPKKRAKVDVATHG+TYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPL
Sbjct: 181 GPPKKRAKVDVATHGRTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPL 240
Query: 241 FSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDE 300
FSD AVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVF+E
Sbjct: 241 FSDAAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFEE 300
Query: 301 IDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTN 343
IDACLRGWFGS+RVDHVKGETISFSFPDGSRSTIVFASSHNTN
Sbjct: 301 IDACLRGWFGSARVDHVKGETISFSFPDGSRSTIVFASSHNTN 343
>gi|5708110|emb|CAB52372.1| terminase [Gallid herpesvirus 1]
Length = 764
Score = 646 bits (1666), Expect = 0.0
Identities = 358/771 (46%), Positives = 481/771 (61%), Gaps = 58/771 (7%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQKVGVDEA---------------------SAGLTLGGD 39
M G++ V++Y + L K+ ++ G D+ SA T+
Sbjct: 1 MLGKESVEIVKRYRDALRKRTMER-GPDDVDGQEMSDSNFITTASICDRNDSARDTMNSP 59
Query: 40 ALRVPFLDFATATPKRHQTVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRD-- 97
A R FA P+RHQ + +G+ H+CC S FS +A +++ +L + D
Sbjct: 60 ASR---FQFAIDVPQRHQACIAPIGSFHNCCAISRAFSYMASEIIYENLASYSTKYTDTD 116
Query: 98 --------------FGGDHTAKLEFLAPELVRAVARLRFRECAPEDAVPQRNAYYSVLNT 143
F G A + + P L + +A L F AP D++ A+ ++N
Sbjct: 117 AALNDLQVSPKRQLFTG---AAEDSILPALRQKLANLNFARFAPSDSLIHDKAFDGIMNG 173
Query: 144 FQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLAETTGPPKKRAKVDVATHGQTYGTLEL 203
++ +S+ F QL +F+ F LLK SF + + KRAK++ T Q GTLEL
Sbjct: 174 YRGFVKSDEFSQLNNFIYRFHTLLKKSFSGQASNDY-----KRAKLEKTTSEQRDGTLEL 228
Query: 204 FQKMILMHATYFLAAVLLGDHA-EQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRH 262
FQKMILMHATYF +++ LG+ + E+ N +L VF LFS+ ++HFRQR TVFLVPRRH
Sbjct: 229 FQKMILMHATYFASSICLGEGSTERSNRYLSTVFNTSLFSENIIQHFRQRTTVFLVPRRH 288
Query: 263 GKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGETI 322
GKTWFLVPLI+L ++SF GI+IGYTAH+RKATEPVF EI L WFG+ +V+ VKGETI
Sbjct: 289 GKTWFLVPLISLLVSSFEGIRIGYTAHLRKATEPVFIEIFTRLYKWFGAKQVEQVKGETI 348
Query: 323 SFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIF 382
+F+F +G++S IVFASS NTNG+RGQDFN LFVDEANFI+P A+ T+MGFLNQ NCK+ F
Sbjct: 349 TFTFRNGNKSAIVFASSQNTNGLRGQDFNFLFVDEANFIKPAALHTVMGFLNQTNCKLFF 408
Query: 383 VSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFIT 442
VSSTNT ++TS LYNL+G + LLNVVTYICD+HMP + T+ T CSCY+L+KPVF++
Sbjct: 409 VSSTNTCHSNTSLLYNLKGKTNSLLNVVTYICDEHMPEIQKRTDVTTCSCYVLHKPVFVS 468
Query: 443 MDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNSGL--M 500
MD VR TADLF+ DSFM EI GG+A + DR ++ A ++FL+YRPST++ + +
Sbjct: 469 MDSEVRNTADLFVKDSFMHEIAGGRAGKYDSDRTLVPVRALDQFLIYRPSTSSKPNISGL 528
Query: 501 APELYVYVDPAFTANTRASGTGIAVVGRYRDDFIIFALEHFFLRALTGSAPADIARCVVH 560
L VYVDPAFT N ASGTGIA+V RD ++ EHF+L ALTG A +IA+CV
Sbjct: 529 GKILTVYVDPAFTTNRSASGTGIALVTALRDSMVLMGAEHFYLDALTGEAALEIAQCVYL 588
Query: 561 SLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGPGPELLFYH 620
+A +H GAFR +R+AVEGNSSQDSA AIA ++ + + G + L F H
Sbjct: 589 CIAYCCLIHAGAFREIRIAVEGNSSQDSAAAIAGNLTELLDSLRRRLGFS-----LTFAH 643
Query: 621 CEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQL 680
PG A+ +PF+LLNKQK+ AF+ F+ FNSG MASQELVS T+ L DP EYL +Q+
Sbjct: 644 SRQPGTAMAHPFYLLNKQKSRAFDLFVSLFNSGRFMASQELVSNTLVLSKDPCEYLVDQI 703
Query: 681 NNLIETVSPNTD-VRMYSGKRNGAADDLMVAVIMAIYLAAPTGIPPAFFPI 730
N+ T D R +SGK+ DD++VA +M+ YLA + PI
Sbjct: 704 RNITVTHGQGPDSFRTFSGKQGRVPDDMLVAAVMSTYLALEGSPTAGYHPI 754
>gi|20452460|gb|AAM22108.1|AF501667_7 DNA packaging protein
[Cercopithecine herpesvirus 1]
Length = 371
Score = 630 bits (1626), Expect = e-179
Identities = 316/364 (86%), Positives = 331/364 (90%)
Query: 369 IMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNAT 428
IMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNAT
Sbjct: 1 IMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNAT 60
Query: 429 ACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLL 488
ACSCYILNKPVFITMDGA+RRTADLFL DSFMQEIIGGQ+RE DDRPVLTK AGERFLL
Sbjct: 61 ACSCYILNKPVFITMDGALRRTADLFLADSFMQEIIGGQSREADDDRPVLTKPAGERFLL 120
Query: 489 YRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDFIIFALEHFFLRALTG 548
YRPSTTTN+GLM PELYVYVDPAFTANTRASGTGIA VGRYRDDFI+FALEHFFLRALTG
Sbjct: 121 YRPSTTTNAGLMDPELYVYVDPAFTANTRASGTGIAAVGRYRDDFIVFALEHFFLRALTG 180
Query: 549 SAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAG 608
SA DIARC HSL QVLALHPG FRSVRVAVEGNSSQDSAVAIA +H E+HR+LAS G
Sbjct: 181 SAADDIARCAAHSLTQVLALHPGVFRSVRVAVEGNSSQDSAVAIAARLHAELHRLLASGG 240
Query: 609 ANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRL 668
A PELLFYHCEPPG +VLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQE+VSVT+RL
Sbjct: 241 AAVAVPELLFYHCEPPGASVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQEVVSVTMRL 300
Query: 669 QTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAAPTGIPPAFF 728
QTDPVEYL+ QLNNL E +SPN+D R YSGKRNGA+DDLMVAVIMA+YLAA AF
Sbjct: 301 QTDPVEYLTAQLNNLTEILSPNSDARSYSGKRNGASDDLMVAVIMAVYLAATPHAHHAFA 360
Query: 729 PITR 732
PITR
Sbjct: 361 PITR 364
>gi|18307972|gb|AAL67783.1|AF458647_5 UL15 [Squirrel monkey
herpesvirus 1]
Length = 393
Score = 602 bits (1553), Expect = e-171
Identities = 307/391 (78%), Positives = 334/391 (84%), Gaps = 2/391 (0%)
Query: 345 IRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAAD 404
IRGQDFNLLFVDEANFIRP+AVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRG+AD
Sbjct: 1 IRGQDFNLLFVDEANFIRPEAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGSAD 60
Query: 405 ELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEII 464
LLNVVTYICDDHM RV HT+ATACSCY+LNKPVFITMD AVRRTA+LFL DSFMQEII
Sbjct: 61 ALLNVVTYICDDHMARVTAHTDATACSCYVLNKPVFITMDSAVRRTAELFLADSFMQEII 120
Query: 465 GGQARET-GDDRPVLTKSAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGI 523
GG+ E +DR VLT+SAGERFLLYRPSTT N LM PEL+VYVDPAFTANTRASGTG+
Sbjct: 121 GGRGPEAPTEDRQVLTRSAGERFLLYRPSTTANGALMDPELFVYVDPAFTANTRASGTGV 180
Query: 524 AVVGRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGN 583
AV GRYR D I+FALEHFFLRALTGSA DIA C S QVLALHPG FRSV VAVEGN
Sbjct: 181 AVAGRYRGDHILFALEHFFLRALTGSAADDIAGCAAQSALQVLALHPGVFRSVCVAVEGN 240
Query: 584 SSQDSAVAIATHVHTEMHRILASAGANGPGP-ELLFYHCEPPGGAVLYPFFLLNKQKTPA 642
SSQDSAVAIA +H EM R+LA A P E+ FYHCEPPGGAVLYPFFLLNKQKTPA
Sbjct: 241 SSQDSAVAIAAAMHAEMLRVLAGRDAAAAEPVEIAFYHCEPPGGAVLYPFFLLNKQKTPA 300
Query: 643 FEYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNG 702
F+YFIKKFNSGGV+ASQELVS TVRLQ+DPVEYL QLNNL ETV+P ++VR YSGKRNG
Sbjct: 301 FDYFIKKFNSGGVLASQELVSTTVRLQSDPVEYLMGQLNNLTETVAPQSEVRTYSGKRNG 360
Query: 703 AADDLMVAVIMAIYLAAPTGIPPAFFPITRT 733
A+DD+MVA IMA+YL+A +F P++ T
Sbjct: 361 ASDDMMVATIMAVYLSASPEAMRSFAPLSST 391
>gi|76472|pir||G27341 hypothetical protein ORF42 - human herpesvirus
3
Length = 395
Score = 512 bits (1319), Expect = e-144
Identities = 253/394 (64%), Positives = 311/394 (78%), Gaps = 9/394 (2%)
Query: 345 IRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAAD 404
IRGQDFNLLFVDEANFIRPDAVQTI+GFLNQ NCKIIFVSSTNTGKASTSFLYNLRG++D
Sbjct: 2 IRGQDFNLLFVDEANFIRPDAVQTIVGFLNQTNCKIIFVSSTNTGKASTSFLYNLRGSSD 61
Query: 405 ELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEII 464
+LLNVVTY+CDDHMPRV+ H++ TACSCY+LNKPVFITMDGA+RRTADLF+ DSF+QEI+
Sbjct: 62 QLLNVVTYVCDDHMPRVLAHSDVTACSCYVLNKPVFITMDGAMRRTADLFMADSFVQEIV 121
Query: 465 GGQARETGD---DRPVLTKSAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGT 521
GG+ + +G DRP+ TK+A ERF+LYRPST N +++ LYVYVDPAFT+NTRASGT
Sbjct: 122 GGRKQNSGGVGFDRPLFTKTARERFILYRPSTVANCAILSSVLYVYVDPAFTSNTRASGT 181
Query: 522 GIAVVGRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVE 581
G+A+VGRY+ D+IIF LEHFFLRALTG++ ++I RCV L +LALHP F +V V++E
Sbjct: 182 GVAIVGRYKSDWIIFGLEHFFLRALTGTSSSEIGRCVTQCLGHILALHPNTFTNVHVSIE 241
Query: 582 GNSSQDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTP 641
GNSSQDSAVAI+ + + +L P LLFYH PPG +V YPFFLL KQKTP
Sbjct: 242 GNSSQDSAVAISLAI-AQQFAVLEKGNVLSSAPVLLFYHSIPPGCSVAYPFFLLQKQKTP 300
Query: 642 AFEYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVS---PNTDVRMYSG 698
A +YF+K+FNSG ++ASQELVS+TV+L DPVEYL +QL+NL E + N D + Y+G
Sbjct: 301 AVDYFVKRFNSGNIIASQELVSLTVKLGVDPVEYLCKQLDNLTEVIKGGMGNLDTKTYTG 360
Query: 699 K--RNGAADDLMVAVIMAIYLAAPTGIPPAFFPI 730
K +DDLMVA+IM++Y+ + F PI
Sbjct: 361 KGTTGTMSDDLMVALIMSVYIGSSCIPDSVFMPI 394
>gi|334089|gb|AAA47479.1| UL15
Length = 377
Score = 491 bits (1264), Expect = e-137
Identities = 256/381 (67%), Positives = 304/381 (79%), Gaps = 8/381 (2%)
Query: 345 IRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAAD 404
IRGQDFNLLFVDEANFIRPDAVQTI+GF+NQA+CKIIFVSSTNTGKASTSFL NLRG
Sbjct: 1 IRGQDFNLLFVDEANFIRPDAVQTILGFMNQASCKIIFVSSTNTGKASTSFLTNLRGT-- 58
Query: 405 ELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEII 464
++LNVVTY+CD+HM RVV HT+ATACSCY+LNKPVFITMD A R TA+ LPDSFMQEI+
Sbjct: 59 DMLNVVTYVCDEHMRRVVAHTDATACSCYVLNKPVFITMDAATRTTAERLLPDSFMQEIL 118
Query: 465 GGQARETGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIA 524
GG + PVLT++AGERFLLYRPS+ N L+A L+VYVDPAFTAN RASGTG+A
Sbjct: 119 GGAV--AAREAPVLTRAAGERFLLYRPSSVANRRLLAGTLHVYVDPAFTANARASGTGVA 176
Query: 525 VVGRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNS 584
VVG YR +I+ LEHFFLRALTG++ +IARCVV LA+VLALH GAF +VRVAVEGNS
Sbjct: 177 VVGSYRRSWIVLGLEHFFLRALTGASADEIARCVVRCLARVLALHDGAFSAVRVAVEGNS 236
Query: 585 SQDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPG-GAVLYPFFLLNKQKTPAF 643
SQDSAVAI + E+ + A+ P ++FYH G GAV YPFFLL KQKTPAF
Sbjct: 237 SQDSAVAIVGAMRRELAELRAARVV--ADPAVVFYHHGAAGAGAVRYPFFLLQKQKTPAF 294
Query: 644 EYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGA 703
++F+K+FNSG VMASQELVSVTV + DPVEYL+ QL NL+ET S + R+++GKR G
Sbjct: 295 DFFVKQFNSGAVMASQELVSVTVGARADPVEYLNAQLGNLVETASGAGEHRVFTGKRGGC 354
Query: 704 ADDLMVAVIMAIYLAA-PTGI 723
ADDL VA++MA++L+ P G+
Sbjct: 355 ADDLAVALVMAVHLSTLPDGL 375
>gi|9625775|ref|NP_040024.1| UL89 [Human herpesvirus 5]
gi|139645|sp|P16732|VTER_HCMVA PROBABLE DNA PACKAGING PROTEIN
gi|1813970|emb|CAA35363.1| HCMVUL89 [Human herpesvirus 5]
gi|27808816|tpg|DAA00186.1| TPA: UL89 [Human herpesvirus 5]
Length = 674
Score = 448 bits (1152), Expect = e-124
Identities = 272/678 (40%), Positives = 385/678 (56%), Gaps = 52/678 (7%)
Query: 45 FLDFATATPKRHQTVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTA 104
F + AT KR+Q + P +G H C E F L+ R RD+ +
Sbjct: 32 FTNVATLCRKRYQMMHPELGLAHSCNE------------AFLPLMAFCGRHRDYNSPEES 79
Query: 105 KLEFLAPELVR-AVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDF 163
+ E L E ++ A+ +L FR C+ E + A Y L+ L+R F+Q+ +F+ DF
Sbjct: 80 QRELLFHERLKSALDKLTFRPCSEE-----QRASYQKLDALTELYRDPQFQQINNFMTDF 134
Query: 164 AQLLKTSFRASSLAETTGPPKKRAKVDVATHGQTYGT-LELFQKMILMHATYFLAAVLLG 222
+ L F A G LE FQK +L+H +F+A +
Sbjct: 135 KKWLDGGF------------------STAVEGDAKAIRLEPFQKNLLIHVIFFIAVTKIP 176
Query: 223 DHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGI 282
A +V +L F+I S T++ F+Q+ATVFLVPRRHGKTWF++P+I+ L GI
Sbjct: 177 VLANRVLQYLIHAFQIDFLSQTSIDIFKQKATVFLVPRRHGKTWFIIPIISFLLKHMIGI 236
Query: 283 KIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNT 342
IGY AH + ++ V E++ R F V K IS G++ST +FAS +NT
Sbjct: 237 SIGYVAHQKHVSQFVLKEVEFRCRHTFARDYVVENKDNVISIDHR-GAKSTALFASCYNT 295
Query: 343 NGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGA 402
N IRGQ+F+LL VDEA+FI+ +A TI+GFL Q KIIF+SSTNT ST FL L A
Sbjct: 296 NSIRGQNFHLLLVDEAHFIKKEAFNTILGFLAQNTTKIIFISSTNTTSDSTCFLTRLNNA 355
Query: 403 ADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQE 462
++LNVV+Y+C++H+ +ATAC CY L+KP FI+++ VR+TA++F+P +FM E
Sbjct: 356 PFDMLNVVSYVCEEHLHSFTEKGDATACPCYRLHKPTFISLNSQVRKTANMFMPGAFMDE 415
Query: 463 IIGGQARETGDDRPVLTKSAGERFLLYRPST--TTNSGLMAPELYVYVDPAFTANTRASG 520
IIGG + + ++T + E F + R ST T LYVY+DPAFT N +ASG
Sbjct: 416 IIGG-TNKISQNTVLITDQSREEFDILRYSTLNTNAYDYFGKTLYVYLDPAFTTNRKASG 474
Query: 521 TGIAVVGRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAV 580
TG+A VG YR F+I+ LEHFFLR L+ S+ IA C H + VL+LHP +R+AV
Sbjct: 475 TGVAAVGAYRHQFLIYGLEHFFLRDLSESSEVAIAECAAHMIISVLSLHP-YLDELRIAV 533
Query: 581 EGNSSQDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKT 640
EGN++Q +AV IA ++ + + +LFYH P + PF+L+ + K
Sbjct: 534 EGNTNQAAAVRIAC--------LIRQSVQSSTLIRVLFYH-TPDQNHIEQPFYLMGRDKA 584
Query: 641 PAFEYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIE-TVSPNTDVRMYSGK 699
A E FI +FNSG + ASQELVS T++L DP+EYL EQ+ NL T++ T R + +
Sbjct: 585 LAVEQFISRFNSGYIKASQELVSYTIKLSHDPIEYLLEQIQNLHRVTLAEGTTARYSAKR 644
Query: 700 RNGAADDLMVAVIMAIYL 717
+N +DDL++AVIMA YL
Sbjct: 645 QNRISDDLIIAVIMATYL 662
>gi|20026680|ref|NP_612722.1| DNA packaging protein UL89 [Chimpanzee
cytomegalovirus]
gi|19881108|gb|AAM00728.1|AF480884_80 DNA packaging protein UL89
[chimpanzee cytomegalovirus]
Length = 672
Score = 436 bits (1122), Expect = e-121
Identities = 272/714 (38%), Positives = 382/714 (53%), Gaps = 63/714 (8%)
Query: 7 ASDVQQYLERLEKQRQQKVGVDEASAGLTLGGDALRVPFLDFATATPKRHQTVVPGVGTL 66
A+ +Q+ E L+K++ + F + A KR+Q + P +G
Sbjct: 7 AAKIQERYEELQKRKNHPTS-------------CISTAFTNVAALCRKRYQMMHPELGLA 53
Query: 67 HDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLEFLAPELVRAVARLRFRECA 126
H C E F L+ R RD+ + L A+ L FR C
Sbjct: 54 HSCNE------------AFLPLMAFCGRYRDYHSPEEKRELVFHERLKSALDELAFRPCP 101
Query: 127 PEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLAETTGPPKKR 186
E + A Y L+ L+R F Q+ F+ DF + L F + AE P +
Sbjct: 102 EE-----QRASYQKLDALTELYRDPQFVQINSFMTDFKKWLDGGF---ATAEGDAKPIR- 152
Query: 187 AKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAV 246
LE FQK +L+H +F+A + A +V +L F+I S T++
Sbjct: 153 --------------LEPFQKNLLIHVIFFIAVTKIPVLANRVLQYLIHAFQIDFLSQTSI 198
Query: 247 RHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLR 306
F+Q+ATVFLVPRRHGKTWF++P+I+ L GI IGY AH + ++ V E++ R
Sbjct: 199 EIFKQKATVFLVPRRHGKTWFIIPIISFLLKHMIGISIGYVAHQKHVSQFVLKEVEFRCR 258
Query: 307 GWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAV 366
F + K IS G++ST +FAS +NTN IRGQ+F+LL VDEA+FI+ +A
Sbjct: 259 YTFARDYLVENKDNVISIDHR-GAKSTALFASCYNTNSIRGQNFHLLLVDEAHFIKKEAF 317
Query: 367 QTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTN 426
TI+GFL Q KIIF+SSTNT +T FL L A ++LNVV+Y+C++H+ +
Sbjct: 318 NTILGFLAQNTTKIIFISSTNTTSDATCFLTRLNNAPFDMLNVVSYVCEEHLHSFTEKGD 377
Query: 427 ATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERF 486
ATAC CY L+KP FI+++ VR+TA++F+P +FM EIIGG + + ++T + E F
Sbjct: 378 ATACPCYRLHKPTFISLNSQVRKTANMFMPGAFMDEIIGG-TNKIAQNNVLITDQSREEF 436
Query: 487 LLYRPST--TTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDFIIFALEHFFLR 544
+ R ST T LY+Y+DPAFT N +ASGTG+A VG YR FII+ LEHFFLR
Sbjct: 437 DILRYSTLNTNAYDYFGKTLYIYLDPAFTTNRKASGTGVAAVGTYRHQFIIYGLEHFFLR 496
Query: 545 ALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRIL 604
L+ S+ I+ C H +L+LHP +R+AVEGNS+Q +AV IA + +
Sbjct: 497 DLSESSEVAISECAAHMAVSILSLHP-YLDELRIAVEGNSNQAAAVRIACLIRQSVQSTK 555
Query: 605 ASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSV 664
+LFYH P + PF+L+ K A E FI +FNSG + ASQE+VS
Sbjct: 556 LI--------RVLFYH-TPDTNRIQQPFYLMGHDKALAVEQFISRFNSGYIKASQEVVSY 606
Query: 665 TVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGA-ADDLMVAVIMAIYL 717
T++L DP+EYL EQL NL YS KR+ +DDL++AVIMA YL
Sbjct: 607 TIKLNHDPIEYLLEQLQNLHRVTLAEGGAGSYSAKRHQRFSDDLIIAVIMATYL 660
>gi|14251081|ref|NP_116438.1| T89 [Tupaia herpesvirus]
gi|12656019|gb|AAK00707.1| viral terminase [Tupaia herpesvirus]
gi|14210775|gb|AAK57138.1| T89 [Tupaia herpesvirus]
Length = 673
Score = 436 bits (1122), Expect = e-121
Identities = 276/688 (40%), Positives = 388/688 (56%), Gaps = 61/688 (8%)
Query: 39 DALRVPFLDFATATPKRHQTVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRG--- 95
+ + F D AT KR QT+ P +G H C NS+ +R
Sbjct: 26 NVISTEFPDAATLCKKRFQTLSPELGLAHAC----------------NSVCLPLVRFCRA 69
Query: 96 -RDFGGDHTAKLEFLAPELVRA-VARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAF 153
RD+ T VRA + + FR C+ E QR+ + + L++ F
Sbjct: 70 YRDYNQPLTRHATLNLSAAVRAGLDEITFRPCSEE----QRSQSHKIA-ALTGLYKDPDF 124
Query: 154 RQLVHFVRDFAQLLKTSFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHAT 213
Q+ F+ DF + + F S + + T+ LE FQK +LMH
Sbjct: 125 LQINSFLTDFRRWIDGDFDPSGGGDKS---------------TTHIYLEPFQKNLLMHVL 169
Query: 214 YFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIA 273
F+A L A +V +L +F+I S ++ F+Q+ATVFLVPRRHGKTWF VP+I
Sbjct: 170 VFIAVTKLPVLANRVAEYLLYMFDIDFLSAASLDLFKQKATVFLVPRRHGKTWFTVPIIC 229
Query: 274 LSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRST 333
L + +GI IGY AH + ++ V E++ R FG + K IS P ++ST
Sbjct: 230 FLLKNVQGISIGYVAHQKHVSQFVLKEVEFRCRRLFGRTHTVENKDNVISIDHPI-AKST 288
Query: 334 IVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKAST 393
+FAS +NTN IRGQ+F+LL VDEA+FI+ DA TI+GFL Q KIIF+SSTNT +T
Sbjct: 289 ALFASCYNTNSIRGQNFHLLLVDEAHFIKKDAFNTILGFLAQNTTKIIFISSTNTTTDAT 348
Query: 394 SFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADL 453
FL L + ++LNV++Y+C++H+ +ATAC CY L+KP FIT++ VR+TA++
Sbjct: 349 CFLTKLNNSPFDMLNVISYVCEEHIQVFSEKPDATACPCYRLHKPTFITINSEVRQTANM 408
Query: 454 FLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPE----LYVYVD 509
FL SFM EI+GG + +D P++T + E F ++R ST + P LYVY+D
Sbjct: 409 FLAGSFMDEIMGG-TNKIVEDTPLITDESREEFDIFRYSTMNKQ--LHPHLDRCLYVYLD 465
Query: 510 PAFTANTRASGTGIAVVGRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALH 569
PAFT+N +ASGTGI +GRYR+ ++I+ LEH+FL+ L S+ IA C H L VL LH
Sbjct: 466 PAFTSNKKASGTGIVALGRYREQYLIYGLEHYFLKDLLESSETAIAECAAHMLLAVLQLH 525
Query: 570 PGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVL 629
P F VRV +EGNS+Q +AV IA + IL + +LFYH P +
Sbjct: 526 P-FFLEVRVTIEGNSNQAAAVRIACAI---KQNILCNRHV-----VILFYH-TPDQNEIE 575
Query: 630 YPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSP 689
PF+LL ++K A E FI KFNSG + ASQELVS T+++ DPV+YL EQL N I+ ++
Sbjct: 576 QPFYLLGREKRLAVESFIAKFNSGYIKASQELVSFTIKITYDPVDYLLEQLKN-IQRITV 634
Query: 690 NTDVRMYSGKRNGAADDLMVAVIMAIYL 717
N V Y+ K++ ADDL +A+IMA+YL
Sbjct: 635 NEYV-TYNAKKHNCADDLAIALIMAVYL 661
>gi|74010|pir||QQBEI5 UL89 protein - human cytomegalovirus (strain
AD169)
Length = 724
Score = 424 bits (1091), Expect = e-117
Identities = 272/728 (37%), Positives = 385/728 (52%), Gaps = 102/728 (14%)
Query: 45 FLDFATATPKRHQTVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTA 104
F + AT KR+Q + P +G H C E F L+ R RD+ +
Sbjct: 32 FTNVATLCRKRYQMMHPELGLAHSCNE------------AFLPLMAFCGRHRDYNSPEES 79
Query: 105 KLEFLAPELVR-AVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDF 163
+ E L E ++ A+ +L FR C+ E + A Y L+ L+R F+Q+ +F+ DF
Sbjct: 80 QRELLFHERLKSALDKLTFRPCSEE-----QRASYQKLDALTELYRDPQFQQINNFMTDF 134
Query: 164 AQLLKTSFRASSLAETTGPPKKRAKVDVATHGQTYGT-LELFQKMILMHATYFLAAVLLG 222
+ L F A G LE FQK +L+H +F+A +
Sbjct: 135 KKWLDGGF------------------STAVEGDAKAIRLEPFQKNLLIHVIFFIAVTKIP 176
Query: 223 DHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGI 282
A +V +L F+I S T++ F+Q+ATVFLVPRRHGKTWF++P+I+ L GI
Sbjct: 177 VLANRVLQYLIHAFQIDFLSQTSIDIFKQKATVFLVPRRHGKTWFIIPIISFLLKHMIGI 236
Query: 283 KIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNT 342
IGY AH + ++ V E++ R F V K IS G++ST +FAS +NT
Sbjct: 237 SIGYVAHQKHVSQFVLKEVEFRCRHTFARDYVVENKDNVISIDHR-GAKSTALFASCYNT 295
Query: 343 N--------------------------------------------------GIRGQDFNL 352
N IRGQ+F+L
Sbjct: 296 NVSSSMMITYALPQTVASPCPPFFCCFLFLLPVNCQTPLVHESLFCLLSTQSIRGQNFHL 355
Query: 353 LFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTY 412
L VDEA+FI+ +A TI+GFL Q KIIF+SSTNT ST FL L A ++LNVV+Y
Sbjct: 356 LLVDEAHFIKKEAFNTILGFLAQNTTKIIFISSTNTTSDSTCFLTRLNNAPFDMLNVVSY 415
Query: 413 ICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETG 472
+C++H+ +ATAC CY L+KP FI+++ VR+TA++F+P +FM EIIGG +
Sbjct: 416 VCEEHLHSFTEKGDATACPCYRLHKPTFISLNSQVRKTANMFMPGAFMDEIIGG-TNKIS 474
Query: 473 DDRPVLTKSAGERFLLYRPST--TTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYR 530
+ ++T + E F + R ST T LYVY+DPAFT N +ASGTG+A VG YR
Sbjct: 475 QNTVLITDQSREEFDILRYSTLNTNAYDYFGKTLYVYLDPAFTTNRKASGTGVAAVGAYR 534
Query: 531 DDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAV 590
F+I+ LEHFFLR L+ S+ IA C H + VL+LHP +R+AVEGN++Q +AV
Sbjct: 535 HQFLIYGLEHFFLRDLSESSEVAIAECAAHMIISVLSLHP-YLDELRIAVEGNTNQAAAV 593
Query: 591 AIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKF 650
IA ++ + + +LFYH P + PF+L+ + K A E FI +F
Sbjct: 594 RIAC--------LIRQSVQSSTLIRVLFYH-TPDQNHIEQPFYLMGRDKALAVEQFISRF 644
Query: 651 NSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIE-TVSPNTDVRMYSGKRNGAADDLMV 709
NSG + ASQELVS T++L DP+EYL EQ+ NL T++ T R + ++N +DDL++
Sbjct: 645 NSGYIKASQELVSYTIKLSHDPIEYLLEQIQNLHRVTLAEGTTARYSAKRQNRISDDLII 704
Query: 710 AVIMAIYL 717
AVIMA YL
Sbjct: 705 AVIMATYL 712
>gi|9633135|ref|NP_050241.1| Putative terminase [Human herpesvirus
6B]
gi|11278289|pir||T44207 DNA-packaging protein U66 [similarity] -
human herpesvirus 6 (strain Z29)
gi|5733564|gb|AAD49667.1|AF157706_75 U66 [Human herpesvirus 6B]
Length = 666
Score = 421 bits (1083), Expect = e-116
Identities = 242/613 (39%), Positives = 358/613 (57%), Gaps = 39/613 (6%)
Query: 109 LAPELVRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLK 168
+ P L R + ++F + + Q Y L +F+ L+R F Q+ F++DF + +K
Sbjct: 81 ILPSLTRKLQEMKFLPASDKSFESQ---YTEFLESFKILYREPLFLQIDGFIKDFRKWIK 137
Query: 169 TSFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQV 228
F G +K LE FQK IL+H +F+A L A +V
Sbjct: 138 GEFN------DFGDTRKIQ-------------LEPFQKNILIHVIFFIAVTKLPALANRV 178
Query: 229 NTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTA 288
+L VF+I +++ + +Q+ VFLVPRRHGKTWF+VP+I+ L + GI IGY A
Sbjct: 179 INYLTHVFDIEFVNESTLNTLKQKTNVFLVPRRHGKTWFIVPIISFLLKNIEGISIGYVA 238
Query: 289 HIRKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQ 348
H + + V E++ R F + + + + +ST +FAS +NT+ IRGQ
Sbjct: 239 HQKHVSHFVMKEVEFKCRRMFPEKTITCL--DNVITIDHQNIKSTALFASCYNTHSIRGQ 296
Query: 349 DFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLN 408
FNLL VDE++FI+ DA TI+GFL QA+ KI+F+SSTN+G STSFL L + E+L+
Sbjct: 297 SFNLLIVDESHFIKKDAFSTILGFLPQASTKILFISSTNSGNHSTSFLMKLNNSPFEMLS 356
Query: 409 VVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQA 468
VV+Y+C+DH + NATACSCY L+KP FI+++ V++TA+LFL +F+ EI+GG
Sbjct: 357 VVSYVCEDHAHMLNERGNATACSCYRLHKPKFISINAEVKKTANLFLEGAFIHEIMGGAT 416
Query: 469 RETGDDRPVLTKSAGERFLLYRPSTTTNS--GLMAPELYVYVDPAFTANTRASGTGIAVV 526
+D ++T+ F +R ST + + +LYVY+DPA+T N RASGTGIA +
Sbjct: 417 CNVIND-VLITEQGQTEFEFFRYSTINKNLIPFLGKDLYVYLDPAYTGNRRASGTGIAAI 475
Query: 527 GRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQ 586
G Y D +I++ +EH+FL +L S+ IA C H + +L LHP F V++ +EGNS+Q
Sbjct: 476 GTYLDQYIVYGMEHYFLESLMTSSDTAIAECAAHMILSILDLHP-FFTEVKIIIEGNSNQ 534
Query: 587 DSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYF 646
SAV IA + I A+ ++ F+H P + PF+LL K+K A E+F
Sbjct: 535 ASAVKIACII---KENITANKSI-----QVTFFH-TPDQNQIAQPFYLLGKEKKLAVEFF 585
Query: 647 IKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADD 706
I FNSG + ASQEL+S T+++ DPVEY EQ+ N I +S N + YS K+ +DD
Sbjct: 586 ISNFNSGNIKASQELISFTIKITYDPVEYALEQIRN-IHQISVNNYI-TYSAKKQACSDD 643
Query: 707 LMVAVIMAIYLAA 719
L++A+IMAIY+ +
Sbjct: 644 LIIAIIMAIYVCS 656
>gi|74011|pir||QQBEH6 12L protein - human herpesvirus 6 (strain
Uganda-1102)
Length = 667
Score = 414 bits (1064), Expect = e-114
Identities = 241/614 (39%), Positives = 357/614 (57%), Gaps = 40/614 (6%)
Query: 109 LAPELVRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLK 168
+ P L + ++F + + Q Y L +F+ L+R F Q+ F++DF + +K
Sbjct: 81 ILPSLSHKLQEMKFLPASDKSFESQ---YTEFLESFKILYREPLFLQIDGFIKDFRKWIK 137
Query: 169 TSFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQV 228
F G +K LE FQK IL+H +F+A L A +V
Sbjct: 138 GEFN------DFGDTRKIQ-------------LEPFQKNILIHVIFFIAVTKLPALANRV 178
Query: 229 NTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTA 288
+L VF+I +++ + +Q+ VFLVPRRHGKTWF+VP+I+ L + GI IGY A
Sbjct: 179 INYLTHVFDIEFVNESTLNTLKQKTNVFLVPRRHGKTWFIVPIISFLLKNIEGISIGYVA 238
Query: 289 HIRKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTN-GIRG 347
H + + V E++ R F + + + + +ST +FAS +NT+ IRG
Sbjct: 239 HQKHVSHFVMKEVEFKCRRMFPEKTITCL--DNVITIDHQNIKSTALFASCYNTHVSIRG 296
Query: 348 QDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELL 407
Q FNLL VDE++FI+ DA TI+GFL QA+ KI+F+SSTN+G STSFL L + E+L
Sbjct: 297 QSFNLLIVDESHFIKKDAFSTILGFLPQASTKILFISSTNSGNHSTSFLMKLNNSPFEML 356
Query: 408 NVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQ 467
+VV+Y+C+DH + NATACSCY L+KP FI+++ V++TA+LFL +F+ EI+GG
Sbjct: 357 SVVSYVCEDHAHMLNERGNATACSCYRLHKPKFISINAEVKKTANLFLEGAFIHEIMGGA 416
Query: 468 ARETGDDRPVLTKSAGERFLLYRPSTTTNS--GLMAPELYVYVDPAFTANTRASGTGIAV 525
+D ++T+ F +R ST + + +LYVY+DPA+T N RASGTGIA
Sbjct: 417 TCNVIND-VLITEQGQTEFEFFRYSTINKNLIPFLGKDLYVYLDPAYTGNRRASGTGIAA 475
Query: 526 VGRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSS 585
+G Y D +I++ +EH+FL +L S+ IA C H + +L LHP F V++ +EGNS+
Sbjct: 476 IGTYLDQYIVYGMEHYFLESLMTSSDTAIAECAAHMILSILDLHP-FFTEVKIIIEGNSN 534
Query: 586 QDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEY 645
Q SAV IA + I A+ ++ F+H P + PF+LL K+K A E+
Sbjct: 535 QASAVKIACII---KENITANKSI-----QVTFFH-TPDQNQIAQPFYLLGKEKKLAVEF 585
Query: 646 FIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAAD 705
FI FNSG + ASQEL+S T+++ DPVEY EQ+ N I +S N + YS K+ +D
Sbjct: 586 FISNFNSGNIKASQELISFTIKITYDPVEYALEQIRN-IHQISVNNYI-TYSAKKQACSD 643
Query: 706 DLMVAVIMAIYLAA 719
DL++A+IMAIY+ +
Sbjct: 644 DLIIAIIMAIYVCS 657
>gi|1174999|sp|P24443|VTER_HSV6U Probable DNA packaging protein
(Terminase)
gi|325496|gb|AAA65570.1| unidentified spliced gene
Length = 667
Score = 414 bits (1064), Expect = e-114
Identities = 241/614 (39%), Positives = 357/614 (57%), Gaps = 40/614 (6%)
Query: 109 LAPELVRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLK 168
+ P L + ++F + + Q Y L +F+ L+R F Q+ F++DF + +K
Sbjct: 81 ILPSLSHKLQEMKFLPASDKSFESQ---YTEFLESFKILYREPLFLQIDGFIKDFRKWIK 137
Query: 169 TSFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQV 228
F G +K LE FQK IL+H +F+A L A +V
Sbjct: 138 GEFN------DFGDTRKIQ-------------LEPFQKNILIHVIFFIAVTKLPALANRV 178
Query: 229 NTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTA 288
+L VF+I +++ + +Q+ VFLVPRRHGKTWF+VP+I+ L + GI IGY A
Sbjct: 179 INYLTHVFDIEFVNESTLNTLKQKTNVFLVPRRHGKTWFIVPIISFLLKNIEGISIGYVA 238
Query: 289 HIRKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTN-GIRG 347
H + + V E++ R F + + + + +ST +FAS +NT+ IRG
Sbjct: 239 HQKHVSHFVMKEVEFKCRRMFPEKTITCL--DNVITIDHQNIKSTALFASCYNTHQSIRG 296
Query: 348 QDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELL 407
Q FNLL VDE++FI+ DA TI+GFL QA+ KI+F+SSTN+G STSFL L + E+L
Sbjct: 297 QSFNLLIVDESHFIKKDAFSTILGFLPQASTKILFISSTNSGNHSTSFLMKLNNSPFEML 356
Query: 408 NVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQ 467
+VV+Y+C+DH + NATACSCY L+KP FI+++ V++TA+LFL +F+ EI+GG
Sbjct: 357 SVVSYVCEDHAHMLNERGNATACSCYRLHKPKFISINAEVKKTANLFLEGAFIHEIMGGA 416
Query: 468 ARETGDDRPVLTKSAGERFLLYRPSTTTNS--GLMAPELYVYVDPAFTANTRASGTGIAV 525
+D ++T+ F +R ST + + +LYVY+DPA+T N RASGTGIA
Sbjct: 417 TCNVIND-VLITEQGQTEFEFFRYSTINKNLIPFLGKDLYVYLDPAYTGNRRASGTGIAA 475
Query: 526 VGRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSS 585
+G Y D +I++ +EH+FL +L S+ IA C H + +L LHP F V++ +EGNS+
Sbjct: 476 IGTYLDQYIVYGMEHYFLESLMTSSDTAIAECAAHMILSILDLHP-FFTEVKIIIEGNSN 534
Query: 586 QDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEY 645
Q SAV IA + I A+ ++ F+H P + PF+LL K+K A E+
Sbjct: 535 QASAVKIACII---KENITANKSI-----QVTFFH-TPDQNQIAQPFYLLGKEKKLAVEF 585
Query: 646 FIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAAD 705
FI FNSG + ASQEL+S T+++ DPVEY EQ+ N I +S N + YS K+ +D
Sbjct: 586 FISNFNSGNIKASQELISFTIKITYDPVEYALEQIRN-IHQISVNNYI-TYSAKKQACSD 643
Query: 706 DLMVAVIMAIYLAA 719
DL++A+IMAIY+ +
Sbjct: 644 DLIIAIIMAIYVCS 657
>gi|9628784|ref|NP_043815.1| putative DNA packaging protein [Human
herpesvirus 7]
gi|1722805|sp|P52462|VTER_HSV7J Probable DNA packaging protein
(Terminase)
gi|7519677|pir||T41963 hypothetical protein U60-U66 - human
herpesvirus 7 (strain JI)
gi|1139663|gb|AAC54723.1| late spliced gene
gi|2746296|gb|AAC40780.1| putative terminase [Human herpesvirus 7]
Length = 663
Score = 408 bits (1049), Expect = e-112
Identities = 248/682 (36%), Positives = 380/682 (55%), Gaps = 70/682 (10%)
Query: 45 FLDFATATPKRHQTVVPGVGTLHDCCEH-SPLFSAVARRLLFNSLVPAQLRGRDFGGDHT 103
F + A KR + P +G H C H PL+ R+ S +
Sbjct: 31 FPNSAIFCQKRFIILTPELGFTHAYCRHVKPLYLFCDRQRHVKSKIA------------- 77
Query: 104 AKLEFLAPELVRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDF 163
+ L A+++L+F ++ Q + + +F +R+ F Q+ F++DF
Sbjct: 78 -----ICDPLNCALSKLKFTAIIEKNTEVQYQKHLELQTSF---YRNPMFLQIEKFIQDF 129
Query: 164 AQLLKTSFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGD 223
+ + F ++ K+R K LE FQK IL+H +F++ L
Sbjct: 130 QRWICGDFENTN-------KKERIK------------LEPFQKSILIHIIFFISVTKLPT 170
Query: 224 HAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIK 283
A V +L+ F+I ++++V +Q+A+VFLVPRRHGKTWF++P+I L + GI
Sbjct: 171 LANHVLDYLKYKFDIEFINESSVNILKQKASVFLVPRRHGKTWFMIPVICFLLKNLEGIS 230
Query: 284 IGYTAHIRKATEPVFDEIDACLRGWFGSSRVD------HVKGETISFSFPDGSRSTIVFA 337
IGY AH + + V +++ R +F + ++ ETI +ST +FA
Sbjct: 231 IGYVAHQKHVSHFVMKDVEFKCRRFFPQKNITCQDNVITIEHETI--------KSTALFA 282
Query: 338 SSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLY 397
S +NT+ IRGQ FNLL VDE++FI+ DA TI+GFL Q++ KIIF+SSTN+G STSFL
Sbjct: 283 SCYNTHSIRGQSFNLLIVDESHFIKKDAFSTILGFLPQSSTKIIFISSTNSGNHSTSFLT 342
Query: 398 NLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPD 457
L + E+L VV+Y+C+DH+ + NAT C+CY L+KP FI+++ V++TADLFL
Sbjct: 343 KLSNSPFEMLTVVSYVCEDHVHILNDRGNATTCACYRLHKPKFISINADVKKTADLFLEG 402
Query: 458 SFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNS--GLMAPELYVYVDPAFTAN 515
+F EI+GG +D ++T+ F L+R ST + + ELY+Y+DPA+T N
Sbjct: 403 AFKHEIMGGSLCNVVND-TLITEQGLIEFDLFRYSTISKQIIPFLGKELYIYIDPAYTIN 461
Query: 516 TRASGTGIAVVGRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRS 575
RASGTG+A +G Y D +II+ +EH+FL +L ++ A IA C H + VL LHP F
Sbjct: 462 RRASGTGVAAIGTYGDQYIIYGMEHYFLESLLSNSDASIAECASHMILAVLELHP-FFTE 520
Query: 576 VRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLL 635
+++ +EGNS+Q SAV IA + + I + F+H + PF+LL
Sbjct: 521 LKIIIEGNSNQSSAVKIACILKQTISVIRYK--------HITFFHTLDQ-SQIAQPFYLL 571
Query: 636 NKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRM 695
++K A EYFI FNSG + ASQEL+S T+++ DP+EY+ EQ+ NL ++ N V
Sbjct: 572 GREKRLAVEYFISNFNSGYIKASQELISFTIKITYDPIEYVIEQIKNL-HQININEHV-T 629
Query: 696 YSGKRNGAADDLMVAVIMAIYL 717
Y+ K+ +DDL++++IMAIY+
Sbjct: 630 YNAKKQTCSDDLLISIIMAIYM 651
>gi|10140950|ref|NP_065527.1| DNA packaging protein [Alcelaphine
herpesvirus 1]
gi|7444328|pir||T03123 DNA packaging protein - alcelaphine
herpesvirus 1
gi|2337991|gb|AAC58075.1| DNA packaging protein [Alcelaphine
herpesvirus 1]
Length = 686
Score = 380 bits (976), Expect = e-104
Identities = 246/683 (36%), Positives = 365/683 (53%), Gaps = 64/683 (9%)
Query: 53 PKRHQTVVPGVG----TLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDH--TAKL 106
P + ++PGV TL D C L+N + A R D G H A
Sbjct: 47 PHPYLGLLPGVAAYSSTLEDYCH------------LYNPYIDALTRC-DLGQTHRRVATQ 93
Query: 107 EFLAPELVRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQL 166
L+ +L + + +L C +V + + + + T QAL S+ F +L FV + +
Sbjct: 94 PVLSDQLCQQLKKLF--SCPRNTSVKAKLEFEAAVRTHQALDNSQVFLELKTFVLNLSAF 151
Query: 167 LKTSFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAE 226
L + D ++H +ELFQK ++MH +FL ++ + E
Sbjct: 152 LNKRYS-----------------DRSSH------IELFQKQLIMHTFFFLVSIKAPELCE 188
Query: 227 QVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGY 286
+ +L F I + F+Q+A+VFL+PRRHGKTW +V +I++ LAS + ++IGY
Sbjct: 189 KFCNIFKLYFNIDTMDQATLDIFKQKASVFLIPRRHGKTWIVVAIISILLASVQDLRIGY 248
Query: 287 TAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGE--TISFSFPDGSRSTIVFASSHNTNG 344
AH + VF E+ L +F +D VK E TI F P+ ST++ A+ N N
Sbjct: 249 VAHQKHVANAVFTEVINTLHTFFPGKYMD-VKKENGTIIFGLPNKKPSTLLCATCFNKNS 307
Query: 345 IRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAAD 404
IRGQ F LLFVDEANFI+ DA+ TI+GF+ Q + KIIF+SS+N+ STSFLYNL+GA++
Sbjct: 308 IRGQTFQLLFVDEANFIKKDALPTILGFMLQKDAKIIFISSSNSSDQSTSFLYNLKGASE 367
Query: 405 ELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEII 464
+LNVV+Y+C +H +C CY L+ P +I++D ++ T +LFL F E++
Sbjct: 368 RMLNVVSYVCSNHKEDFSMQDGLISCPCYSLHVPSYISIDEQIKTTTNLFLDGVFDTELM 427
Query: 465 GGQARETGDDRPVLTKSAGERFLLYRPSTTTN--SGLMAPELYVYVDPAFTANTRASGTG 522
G + T ++++SA +F L R T + + +++Y+DPAFT N ASGTG
Sbjct: 428 GDSSCGTLSTFQIISESALSQFELCRIDTASPQVQAHLNSTVHMYIDPAFTNNLDASGTG 487
Query: 523 IAVVGRY-RDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVE 581
I+V+GR +I EHFFL+ LTG+A IA C L V+ +HP + ++ +E
Sbjct: 488 ISVIGRLGAKTKVILGCEHFFLQKLTGTAALQIASCATSLLRSVVIIHP-MIKCAQITIE 546
Query: 582 GNSSQDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTP 641
GNSSQDSAVAIA + P P + FYH VL P +LL ++K
Sbjct: 547 GNSSQDSAVAIANFI-----------DECAPIP-VTFYHQSDKTKGVLCPLYLLGQEKAV 594
Query: 642 AFEYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRN 701
AFE FI N G ASQ +VS T++L DPV YL EQ+ I+ S Y K+
Sbjct: 595 AFESFIYAMNLGLCKASQLIVSHTIKLSFDPVTYLLEQV-RAIKCQSLRDGSHTYHAKQK 653
Query: 702 GAADDLMVAVIMAIYLAAPTGIP 724
+DDL+V+V+M++YL++ +P
Sbjct: 654 NLSDDLLVSVVMSLYLSSANTLP 676
>gi|13095610|ref|NP_076521.1| cleavage/packaging protein [Bovine
herpesvirus 4]
gi|4928934|gb|AAD33781.1|AF139096_4 viral terminase [Bovine
herpesvirus 4]
gi|12802560|gb|AAK07952.1|AF318573_32 cleavage/packaging protein
[Bovine herpesvirus 4]
Length = 682
Score = 367 bits (941), Expect = e-100
Identities = 211/524 (40%), Positives = 306/524 (58%), Gaps = 20/524 (3%)
Query: 201 LELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPR 260
+ELFQK +++H YFL ++ + ++ TF + + D ++ F+Q++TVFL+PR
Sbjct: 160 IELFQKQLILHTFYFLISIKTPEETNKMFTFFKHYVGLFDIDDNMLQCFKQKSTVFLIPR 219
Query: 261 RHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGE 320
RHGKTW +V +I++ LAS + IGY AH + VF EI L WF S ++ K
Sbjct: 220 RHGKTWIVVAIISVLLASVENVHIGYVAHQKHVANAVFTEIITTLYQWFPSKNIEIKKEN 279
Query: 321 -TISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCK 379
TI ++ P ST++ A+ N N IRGQ FN+L+VDEANFI+ +A+ I+GF+ Q + K
Sbjct: 280 GTIIYTKPGRKPSTLMCATCFNKNSIRGQTFNILYVDEANFIKKEALPAILGFMLQKDAK 339
Query: 380 IIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPV 439
IIF+SS N+ STSFL+NLR A +++LNVV Y+C +H + T+C CY L+ P
Sbjct: 340 IIFISSVNSADKSTSFLFNLRNAKEKMLNVVNYVCPEHKEDFNLQSTLTSCPCYRLHIPT 399
Query: 440 FITMDGAVRRTADLFLPDSFMQEIIGG-QARETGDDRPVLTKSAGERFLLYRPSTT--TN 496
+IT+D +++ T +LFL D F E++G T V+ + A F + R TT
Sbjct: 400 YITIDESIKNTTNLFLDDVFTTELMGDISTFPTSSMFKVVEEQALFHFDICRVDTTQIDT 459
Query: 497 SGLMAPELYVYVDPAFTANTRASGTGIAVVG--RYRDDFIIFALEHFFLRALTGSAPADI 554
++ LYVYVDPA+T+N+ ASGTGI V + + II +EHF+L+ LTG+A I
Sbjct: 460 VKIIDNVLYVYVDPAYTSNSEASGTGIGAVVPLKTKVKTIILGIEHFYLKNLTGTASQQI 519
Query: 555 ARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGPGP 614
A CV + +L LHP V VAVEGNSSQDSAVAI+T ++ P P
Sbjct: 520 AYCVTSMIKAILTLHP-HINHVNVAVEGNSSQDSAVAISTFINEYC-----------PVP 567
Query: 615 ELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPVE 674
+ F HC +P ++L +K+ AFE FI N+G + ASQ +VS T+++ DPV
Sbjct: 568 -VFFAHCNERSSVFQWPIYILGSEKSQAFEKFICALNTGTLSASQTIVSNTIKISFDPVA 626
Query: 675 YLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLA 718
YL EQ+ I + Y K+ +DD +VAV+MA Y+A
Sbjct: 627 YLMEQI-RAIRCLPLKDGSYTYCAKQKTMSDDTLVAVVMANYMA 669
>gi|20453820|gb|AAM22132.1|AF478169_25 cleavage/packaging protein
[porcine lymphotropic herpesvirus 1]
Length = 683
Score = 362 bits (930), Expect = 1e-98
Identities = 206/591 (34%), Positives = 330/591 (54%), Gaps = 40/591 (6%)
Query: 137 YYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLAETTGPPKKRAKVDVATHGQ 196
+ S L+T+ + F +L +F+ + + L ++ + S
Sbjct: 120 FESALSTYTCSTQCRKFEELKNFIINLSSFLNGTYVSKS--------------------- 158
Query: 197 TYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVF 256
++E FQK +++H YFL ++ + ++ ++ F++ + F+Q+A+VF
Sbjct: 159 --NSVEPFQKQLILHTFYFLISIKAPESCMKLFDIFKVYFDLSDMIPERMEVFKQKASVF 216
Query: 257 LVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDH 316
L+PRRHGKTW +V +I++ L S + IGY AH + + VF EI L +F S ++
Sbjct: 217 LIPRRHGKTWIVVAIISILLTSIEDLHIGYVAHQKHVSNTVFTEIINTLNRFFPSKYIEI 276
Query: 317 VKGE-TISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQ 375
K TI F ST++ A+ N N IRGQ FNLL++DEANFI+ DA+ TI+GF+ Q
Sbjct: 277 KKDNGTILFKADGKKPSTLMCATCFNKNSIRGQTFNLLYIDEANFIKKDALPTILGFMLQ 336
Query: 376 ANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYIL 435
+ K+IF+SS+N+ STSFLY L+ A ++LLNVV+Y+C +H +C CY L
Sbjct: 337 KDAKLIFISSSNSSDQSTSFLYKLKSADEKLLNVVSYVCSEHKEDFSLQDKIISCPCYRL 396
Query: 436 NKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTT 495
+ P +IT+D +++ T +LF+ F E++G + ++++ A +F + R T++
Sbjct: 397 HIPSYITIDTSIKNTTNLFMDGVFATELMGDADNQPSVAFQIVSEVAISQFEMVRIDTSS 456
Query: 496 N--SGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDFIIFALEHFFLRALTGSAPAD 553
+ S + P +++Y+DPA+T NT ASGTGI+++G ++ I+ EHFFL LTGSA D
Sbjct: 457 DGVSKNIHPIVHMYIDPAYTNNTGASGTGISIIGCVQNCKILLGCEHFFLNELTGSASLD 516
Query: 554 IARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGPG 613
I RC V + V LHP + + V ++VEGN+SQD+AVAIA + H
Sbjct: 517 IGRCAVSLIKSVSLLHP-SIKVVHISVEGNTSQDAAVAIANIIDECSH------------ 563
Query: 614 PELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPV 673
+ FYH ++P +++ +K AFE FI NSG + ASQ + S T++L DPV
Sbjct: 564 IPIKFYHHADKAKGAMWPMYIMGSEKAQAFESFIYALNSGTLKASQSITSHTIKLSYDPV 623
Query: 674 EYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAAPTGIP 724
YL EQ+ I+ ++ Y K +DDL+VAV+M+ +LA + +P
Sbjct: 624 SYLIEQI-RAIKCITLKDGGHTYHAKTKNMSDDLLVAVVMSSHLANSSTLP 673
>gi|27452870|gb|AAO12374.1| cleavage/packaging protein [Porcine
lymphotropic herpesvirus 2]
Length = 683
Score = 360 bits (924), Expect = 5e-98
Identities = 205/594 (34%), Positives = 335/594 (55%), Gaps = 40/594 (6%)
Query: 134 RNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLAETTGPPKKRAKVDVAT 193
R + S L+T+ ++ F +L +F+ + + L ++ + S
Sbjct: 117 RVEFESALSTYTCSTQNRKFEELKNFIINLSSFLNGTYVSKS------------------ 158
Query: 194 HGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRA 253
++E FQK +++H YFL ++ + ++ ++ F++ + F+Q+A
Sbjct: 159 -----NSIEPFQKQLILHTFYFLISIKAPESCMKLFDIFKVYFDLSDMIPERMEVFKQKA 213
Query: 254 TVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSR 313
+VFL+PRRHGKTW +V +I++ L S + IGY AH + + VF EI L +F S
Sbjct: 214 SVFLIPRRHGKTWIVVAIISILLTSIEDLHIGYVAHQKHVSNTVFTEIINTLNRFFPSKY 273
Query: 314 VDHVKGE-TISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGF 372
++ K TI F ST++ A+ N N IRGQ FNLL++DEANFI+ DA+ TI+GF
Sbjct: 274 IEVKKDNGTILFKADGKKPSTLMCATCFNKNSIRGQTFNLLYIDEANFIKKDALPTILGF 333
Query: 373 LNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSC 432
+ Q + K+IF+SS+N+ STSFLY L+ A ++LLN+V+Y+C +H +C C
Sbjct: 334 MLQKDAKLIFISSSNSSDQSTSFLYKLKSADEKLLNIVSYVCSEHKEDFSLQDKIISCPC 393
Query: 433 YILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPS 492
Y L+ P +IT+D +++ T +LF+ F E++G + ++++ + +F + R
Sbjct: 394 YRLHIPSYITIDTSIKNTTNLFMDGVFATELMGDYDNQPSVAFQIVSEVSISQFEMVRID 453
Query: 493 TTTN--SGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDFIIFALEHFFLRALTGSA 550
T+++ S + P +++Y+DPA+T NT ASGTGI+++G ++ ++ EHFFL LTGSA
Sbjct: 454 TSSDSVSKNIHPIVHMYIDPAYTNNTGASGTGISIIGCIQNCKVLLGCEHFFLNELTGSA 513
Query: 551 PADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGAN 610
DI RC V + V LHP + + V ++VEGN+SQD+AVAIA + H
Sbjct: 514 SLDIGRCAVSLIKSVSLLHP-SIKVVHISVEGNTSQDAAVAIANIIDECSHI-------- 564
Query: 611 GPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQT 670
P ++H + GA ++P +++ +K AFE FI NSG + ASQ + S T++L
Sbjct: 565 ---PIKFYHHADKTKGA-MWPMYIMGSEKARAFESFIYALNSGTLKASQSITSHTIKLSY 620
Query: 671 DPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAAPTGIP 724
DPV YL EQ+ I+ ++ Y K +DDL+VAV+M+ +LA + +P
Sbjct: 621 DPVCYLIEQI-RAIKCITLKDGGHTYHAKTKNMSDDLLVAVVMSSHLANSSTLP 673
>gi|2246552|gb|AAB62677.1| ORF 29, conserved spliced gene, DNA
packaging protein homolog [Human herpesvirus 8]
Length = 687
Score = 356 bits (913), Expect = 1e-96
Identities = 235/683 (34%), Positives = 351/683 (50%), Gaps = 52/683 (7%)
Query: 48 FATATPKRHQTVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLE 107
F PK + P +G +H +S + R + P D G ++
Sbjct: 32 FTRHCPKTARMAHPFIGVVHRINSYSSVLETYCTR--HHPATPTSANP-DVGTPRPSEDN 88
Query: 108 FLA-PELVRAVARLRFRECAPEDA----VPQRNAYYSVLNTFQALHRSEAFRQLVHFVRD 162
A P L+ +++ C EDA Q Y + T +LH +R+L F+ +
Sbjct: 89 VPAKPRLLESLSTYLQMRCVREDAHVSTADQLVEYQAARKTHDSLHACSVYRELQAFLVN 148
Query: 163 FAQLLKTSFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLG 222
+ L + LE FQ+ ++MH +FL ++
Sbjct: 149 LSSFLNGCYVPG-----------------------VHWLEPFQQQLVMHTFFFLVSIKAP 185
Query: 223 DHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGI 282
Q+ + F + ++ ++ F+Q+A+VFL+PRRHGKTW +V +I++ LAS I
Sbjct: 186 QKTHQLFGLFKQYFGLFETPNSVLQTFKQKASVFLIPRRHGKTWIVVAIISMLLASVENI 245
Query: 283 KIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGE-TISFSFPDGSRSTIVFASSHN 341
IGY AH + VF EI L WF ++ K TI ++ P G S+++ A+ N
Sbjct: 246 NIGYVAHQKHVANSVFAEIIKTLCRWFPPKNLNIKKENGTIIYTRPGGRSSSLMCATCFN 305
Query: 342 TNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRG 401
N IRGQ FNLL+VDEANFI+ DA+ I+GF+ Q + K+IF+SS N+ STSFL NLR
Sbjct: 306 KNSIRGQTFNLLYVDEANFIKKDALPAILGFMLQKDAKLIFISSVNSSDRSTSFLLNLRN 365
Query: 402 AADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQ 461
A +++LNVV+Y+C DH +C CY L+ P +IT+D +++ T +LF+ +F
Sbjct: 366 AQEKMLNVVSYVCADHREDFHLQDALVSCPCYRLHIPTYITIDESIKTTTNLFMEGAFDT 425
Query: 462 EIIG-GQARETGDDRPVLTKSAGERFLLYRPSTTTN--SGLMAPELYVYVDPAFTANTRA 518
E++G G A V+ +A +F + R TT + +L+VY+DPA+T NT A
Sbjct: 426 ELMGEGAASSNATLYRVVGDAALTQFDMCRVDTTAQQVQKCLGKQLFVYIDPAYTNNTEA 485
Query: 519 SGTGIAVV---GRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRS 575
SGTG+ V + +I +EHFFLR LTG+A +IA C + + LHP
Sbjct: 486 SGTGVGAVVTSTQTPTRSLILGMEHFFLRDLTGAAAYEIASCACTMIKAIAVLHP-TIER 544
Query: 576 VRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLL 635
V AVEGNSSQDS VAIAT ++ P P + F H A+ +P ++L
Sbjct: 545 VNAAVEGNSSQDSGVAIATVLNEIC-----------PLP-IHFLHYTDKSSALQWPIYML 592
Query: 636 NKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRM 695
+K+ AFE FI NSG + ASQ +VS T+++ DPV YL EQ+ I+ V +
Sbjct: 593 GGEKSSAFETFIYALNSGTLSASQTVVSNTIKISFDPVTYLVEQV-RAIKCVPLRDGGQS 651
Query: 696 YSGKRNGAADDLMVAVIMAIYLA 718
YS K+ +DDL+VAV+MA ++A
Sbjct: 652 YSAKQKHMSDDLLVAVVMAHFMA 674
>gi|27452831|gb|AAO12336.1| cleavage/packaging protein [Porcine
lymphotropic herpesvirus 3]
Length = 684
Score = 354 bits (909), Expect = 3e-96
Identities = 223/671 (33%), Positives = 356/671 (52%), Gaps = 50/671 (7%)
Query: 61 PGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDH--TAKLEFLAPELVRAVA 118
P +G L ++S R FN +P D G T + + L L ++
Sbjct: 47 PFLGVLSGINQYSANLECYCRN--FNPYIPTDFTS-DVGTPRYMTTQRQMLIDGLAHSIK 103
Query: 119 RLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLAE 178
FRE P + + + S L T+Q + F +L +F+ + + L ++ + +
Sbjct: 104 SF-FREDVPVEH-DAKVEFQSALTTYQCSLKCPKFEELRNFIINLSSFLNGAYVSKT--- 158
Query: 179 TTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEI 238
++E FQK +++H YFL ++ Q+ + F++
Sbjct: 159 --------------------SSIEPFQKQLILHTFYFLISIKAPASCVQLFNIFKHYFDM 198
Query: 239 PLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVF 298
+ F+Q+A+VFL+PRRHGKTW +V + ++ L S + IGY AH + + VF
Sbjct: 199 SDMITDTMEIFKQKASVFLIPRRHGKTWIVVAITSILLTSIEDLHIGYVAHQKHVSNAVF 258
Query: 299 DEIDACLRGWFGSSRVDHVKGE--TISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVD 356
EI + +F S ++ VK E TI F ST++ A+ N N IRGQ FNLL++D
Sbjct: 259 TEIMNTMYRFFPSKDIE-VKRENGTILFKREGKKPSTLMCATCFNKNSIRGQTFNLLYID 317
Query: 357 EANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDD 416
EANFI+ DA+ TI+GF+ Q + K+IF+SS+N+ STSFLY L+ A + LLN+V+Y+C++
Sbjct: 318 EANFIKKDALPTILGFMLQKDAKLIFISSSNSSDQSTSFLYKLKSADERLLNIVSYVCNE 377
Query: 417 HMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRP 476
H +C CY L+ P +IT+D ++ T +LF+ F E++G +
Sbjct: 378 HKEDFNLQDKIISCPCYRLHIPSYITIDTTIKNTTNLFMDGVFSSELMGDNDNQHLAAFQ 437
Query: 477 VLTKSAGERFLLYRPSTTTNS--GLMAPELYVYVDPAFTANTRASGTGIAVVG-RYRDDF 533
V++ A +F + R T +++ ++ P +++Y+DPAFT NT ASGTGI+++ +
Sbjct: 438 VVSDIAISQFEMVRIDTLSDAVGKMLNPIVHMYIDPAFTNNTGASGTGISIIACLHNQTK 497
Query: 534 IIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIA 593
++ EH+FL LTGSA DIARC + + V LHP + + ++VEGN+SQD+ VAIA
Sbjct: 498 VLLGCEHYFLSELTGSATVDIARCALSLIKSVALLHP-VVKEIHISVEGNTSQDATVAIA 556
Query: 594 THVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSG 653
++ E I A FYH V++P ++L +K+ AFE FI NSG
Sbjct: 557 -NIIDECSCIPAK-----------FYHHADKTNGVMWPMYILGAEKSQAFESFICALNSG 604
Query: 654 GVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIM 713
+ ASQ ++S T++L DPV YL EQ+ + I+ + Y K +DDL+VAV+M
Sbjct: 605 TLKASQSIISNTIKLSYDPVCYLIEQIRS-IKCIPLKDGGHTYHAKAKNMSDDLLVAVVM 663
Query: 714 AIYLAAPTGIP 724
A++L+ +P
Sbjct: 664 AMHLSNSNSLP 674
>gi|9625642|ref|NP_039889.1| probable DNA packaging protein [Human
herpesvirus 4]
gi|267408|sp|P03219|VTER_EBV PROBABLE DNA PACKAGING PROTEIN
gi|1632798|emb|CAA24834.1| probable DNA packaging protein [Human
herpesvirus 4]
gi|23893636|emb|CAD53440.1| BGRF1-BDRF1 protein; putative DNA
packaging protein [Human herpesvirus 4]
Length = 690
Score = 354 bits (908), Expect = 4e-96
Identities = 211/525 (40%), Positives = 306/525 (58%), Gaps = 21/525 (4%)
Query: 201 LELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPR 260
LE FQK +++H+ YFL ++ + + + + F + + + F+Q+A+VFL+PR
Sbjct: 169 LEAFQKQVVLHSFYFLISIKSLEITDTMFDIFQSAFGLEEMTLEKLHIFKQKASVFLIPR 228
Query: 261 RHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVD-HVKG 319
RHGKTW +V +I+L L++ ++IGY AH + VF EI L F S RV+ + +
Sbjct: 229 RHGKTWIVVAIISLILSNLSNVQIGYVAHQKHVASAVFTEIIDTLTKSFDSKRVEVNKET 288
Query: 320 ETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCK 379
TI+F ST++ A+ N N IRGQ F+LLFVDEANFI+ +A+ I+GF+ Q + K
Sbjct: 289 STITFRHSGKISSTVMCATCFNKNSIRGQTFHLLFVDEANFIKKEALPAILGFMLQKDAK 348
Query: 380 IIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPV 439
IIF+SS N+ +TSFLY L+ A + LLNVV+Y+C +H + +C C+ L+ P
Sbjct: 349 IIFISSVNSADQATSFLYKLKDAQERLLNVVSYVCQEHRQDFDMQDSMVSCPCFRLHIPS 408
Query: 440 FITMDGAVRRTADLFLPDSFMQEIIGG-QARETGDDRPVLTKSAGERFLLYRPSTTTN-- 496
+ITMD +R T +LFL +F E++G + G + A + L R T
Sbjct: 409 YITMDSNIRATTNLFLDGAFSTELMGDTSSLSQGSLSRTVRDDAINQLELCRVDTLNPRV 468
Query: 497 SGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDD---FIIFALEHFFLRALTGSAPAD 553
+G +A LYVYVDPA+T NT ASGTGIA V R D I+ LEHFFL+ LTG A
Sbjct: 469 AGRLASSLYVYVDPAYTNNTSASGTGIAAVTHDRADPNRVIVLGLEHFFLKDLTGDAALQ 528
Query: 554 IARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGPG 613
IA CVV ++ ++ LHP V+VAVEGNSSQDSAVAIA+ + G + P
Sbjct: 529 IATCVVALVSSIVTLHP-HLEEVKVAVEGNSSQDSAVAIASII-----------GESCPL 576
Query: 614 PELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPV 673
P F H + ++ +P +LL +K+ AFE I N+ + ASQ VS T++L DPV
Sbjct: 577 P-CAFVHTKDKTSSLQWPMYLLTNEKSKAFERLIYAVNTASLSASQVTVSNTIQLSFDPV 635
Query: 674 EYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLA 718
YL Q+ I+ + Y+GK+ +DD++VA++MA +LA
Sbjct: 636 LYLISQI-RAIKPIPLRDGTYTYTGKQRNLSDDVLVALVMAHFLA 679
>gi|1136808|gb|AAB08384.1| gene 29 protein
Length = 687
Score = 352 bits (902), Expect = 2e-95
Identities = 234/683 (34%), Positives = 350/683 (50%), Gaps = 52/683 (7%)
Query: 48 FATATPKRHQTVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLE 107
F PK + P +G +H +S + R + P D G ++
Sbjct: 32 FTRHCPKTARMAHPFIGVVHRINSYSSVLETYCTR--HHPATPTSANP-DVGTPRPSEDN 88
Query: 108 FLA-PELVRAVARLRFRECAPEDA----VPQRNAYYSVLNTFQALHRSEAFRQLVHFVRD 162
A P L+ +++ C EDA Q Y + T +LH +R+L F+ +
Sbjct: 89 VPAKPRLLESLSTYLQMRCVREDAHVSTADQLVEYQAGRKTHDSLHACSVYRELQAFLVN 148
Query: 163 FAQLLKTSFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLG 222
+ L + LE FQ+ ++MH +FL ++
Sbjct: 149 LSSFLNGCYVPG-----------------------VHWLEPFQQQLVMHTFFFLVSIKAP 185
Query: 223 DHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGI 282
Q+ + F + ++ ++ F+Q+A+VFL+PRRHGKTW +V +I++ LAS I
Sbjct: 186 QKTHQLFGLFKQYFGLFETPNSVLQTFKQKASVFLIPRRHGKTWIVVAIISMLLASVENI 245
Query: 283 KIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGE-TISFSFPDGSRSTIVFASSHN 341
IGY AH + VF EI L WF ++ K TI ++ P G S+++ A+ N
Sbjct: 246 NIGYVAHQKHVANSVFAEIIKTLCRWFPPKNLNIKKENGTIIYTRPGGRSSSLMCATCFN 305
Query: 342 TNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRG 401
N IRGQ FNLL+VDEANFI+ DA+ I+GF+ Q + K+IF+SS N+ STSFL NLR
Sbjct: 306 KNSIRGQTFNLLYVDEANFIKKDALPAILGFMLQKDAKLIFISSVNSSDRSTSFLLNLRN 365
Query: 402 AADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQ 461
A +++LNVV+Y+C DH +C CY L+ P +IT+D +++ T +LF+ +F
Sbjct: 366 AQEKMLNVVSYVCADHREDFHLQDALVSCPCYRLHIPTYITIDESIKTTTNLFMEGAFDT 425
Query: 462 EIIG-GQARETGDDRPVLTKSAGERFLLYRPSTTTN--SGLMAPELYVYVDPAFTANTRA 518
E++G G A V+ +A +F + R TT + +L+VY+DPA+T NT A
Sbjct: 426 ELMGEGAASSNATLYRVVGDAALTQFDMCRVDTTAQEVQKCLGKQLFVYIDPAYTNNTEA 485
Query: 519 SGTGIAVV---GRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRS 575
SGTG+ V + +I +EHFFLR LTG+A +IA C + + LH
Sbjct: 486 SGTGVGAVVTSTQTPTRSLILGMEHFFLRDLTGAAAYEIASCACTMIKAIAVLHT-TIER 544
Query: 576 VRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLL 635
V AVEGNSSQDS VAIAT ++ P P + F H A+ +P ++L
Sbjct: 545 VNAAVEGNSSQDSGVAIATVLNEIC-----------PLP-IHFLHYTDKSSALQWPIYML 592
Query: 636 NKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRM 695
+K+ AFE FI NSG + ASQ +VS T+++ DPV YL EQ+ I+ V +
Sbjct: 593 GGEKSSAFETFIYALNSGTLSASQTVVSNTIKISFDPVTYLVEQV-RAIKCVPLRDGGQS 651
Query: 696 YSGKRNGAADDLMVAVIMAIYLA 718
YS K+ +DDL+VAV+MA ++A
Sbjct: 652 YSAKQKHMSDDLLVAVVMAHFMA 674
>gi|9625990|ref|NP_040231.1| ORF 29~conserved spliced gene
[Saimiriine herpesvirus 2]
gi|267409|sp|Q01020|VTER_HSVSA PROBABLE DNA PACKAGING PROTEIN
gi|74009|pir||QQBEM8 gene 29 protein - saimiriine herpesvirus 1
(strain 11)
gi|60355|emb|CAA45657.1| unnamed protein product [Saimiriine
herpesvirus 2]
Length = 683
Score = 349 bits (895), Expect = 1e-94
Identities = 200/540 (37%), Positives = 311/540 (57%), Gaps = 23/540 (4%)
Query: 201 LELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPR 260
+E FQ +++H YFL ++ + ++ + F + ++ F+Q+A++FL+PR
Sbjct: 160 IEPFQLQLILHTFYFLISIKSPESTNRLFDIFKEYFGLREMDPDMLQIFKQKASIFLIPR 219
Query: 261 RHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGE 320
RHGKTW +V +I++ L S I +GY AH + VF EI L+ WF S +D K
Sbjct: 220 RHGKTWIVVAIISMLLTSVENIHVGYVAHQKHVANSVFTEIINTLQKWFPSRYIDIKKEN 279
Query: 321 -TISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCK 379
TI + PD ST++ A+ N N IRGQ FNLL++DEANFI+ D++ I+GF+ Q + K
Sbjct: 280 GTIIYKSPDKKPSTLMCATCFNKNSIRGQTFNLLYIDEANFIKKDSLPAILGFMLQKDAK 339
Query: 380 IIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPV 439
+IF+SS N+G +TSFL+NL+ A++++LN+V YIC DH + +C CY L P
Sbjct: 340 LIFISSVNSGDRATSFLFNLKNASEKMLNIVNYICPDHKDDFSLQDSLISCPCYKLYIPT 399
Query: 440 FITMDGAVRRTADLFLPDSFMQEIIGGQAR-ETGDDRPVLTKSAGERFLLYRPSTTTN-- 496
+IT+D ++ T +LFL +F E++G + + V+++ A +F L R TT
Sbjct: 400 YITIDETIKNTTNLFLDGAFTTELMGDMSGISKSNMHKVISEMAITQFDLCRADTTKPEI 459
Query: 497 SGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDD---FIIFALEHFFLRALTGSAPAD 553
+ + +Y+Y+DPA+T N+ ASGTGI + ++++ II +EH+FL+ LTG+A
Sbjct: 460 TQCLNSTMYIYIDPAYTNNSEASGTGIGAILTFKNNSSKCIIVGMEHYFLKDLTGTATYQ 519
Query: 554 IARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGPG 613
IA C + L L+P + V VAVEGNSSQDSAVAI+T ++ E I
Sbjct: 520 IASCACSLIRASLVLYP-HIQCVHVAVEGNSSQDSAVAISTLIN-ECSPI---------- 567
Query: 614 PELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPV 673
++ F H + + +P ++L +K+ AFE FI NSG + ASQ ++S T++L DP+
Sbjct: 568 -KVYFIHYKDKTTTMQWPIYMLGAEKSIAFESFIYAINSGTISASQSIISNTIKLSFDPI 626
Query: 674 EYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAAPTGIPPAFFPITRT 733
YL EQ+ + I Y K+ +DD++VAV+MA + A T F P+ T
Sbjct: 627 SYLIEQIRS-IRCYPLRDGSHTYCAKKRTVSDDVLVAVVMAYFFA--TSNKHIFKPLNST 683
>gi|18025509|gb|AAK95453.1| BDRF1 [cercopithicine herpesvirus 15]
Length = 690
Score = 348 bits (893), Expect = 2e-94
Identities = 206/525 (39%), Positives = 303/525 (57%), Gaps = 21/525 (4%)
Query: 201 LELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPR 260
LE FQK +++H+ YFL ++ + + + + F + + + F+Q+A+VFL+PR
Sbjct: 169 LEAFQKQVVLHSFYFLISIKSLEITDTMFDIFQSAFGLEEMTLEKLHIFKQKASVFLIPR 228
Query: 261 RHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVD-HVKG 319
RHGKTW +V +I+L +++ ++IGY AH + VF EI L F + RV+ + +
Sbjct: 229 RHGKTWIVVAIISLIISNLSNVQIGYVAHQKHVASAVFTEIIDTLAKNFDAKRVEVNKET 288
Query: 320 ETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCK 379
TI+F ST++ A+ N N IRGQ F+LLFVDEANFI+ +A+ I+GF+ Q + K
Sbjct: 289 STITFRHSGKISSTVMCATCFNKNSIRGQTFHLLFVDEANFIKKEALPAILGFMLQKDAK 348
Query: 380 IIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPV 439
IIF+SS N+ +TSFLY L+ A + LLNVV+Y+C +H + +C C+ L+ P
Sbjct: 349 IIFISSVNSADQATSFLYKLKDAQERLLNVVSYVCQEHRQDFDMQDSMVSCPCFRLHIPS 408
Query: 440 FITMDGAVRRTADLFLPDSFMQEIIGG-QARETGDDRPVLTKSAGERFLLYRPSTTTN-- 496
+ITMD +R T +LFL +F E++G + G + A + L R T
Sbjct: 409 YITMDSNIRATTNLFLDGAFSTELMGDTSSLSHGSLSRTVRDDALNQLELCRVDTLNPQV 468
Query: 497 SGLMAPELYVYVDPAFTANTRASGTGIAVVGRYR---DDFIIFALEHFFLRALTGSAPAD 553
+G +A LYVYVDPA+T NT ASGTGIA V R D I+ LEHFFL+ LTG A
Sbjct: 469 AGRLASSLYVYVDPAYTNNTSASGTGIAAVTHDRTAPDRVIVLGLEHFFLKDLTGDAALQ 528
Query: 554 IARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGPG 613
IA C V ++ + LHP V++AVEGNSSQDSAVAIA+ + G + P
Sbjct: 529 IATCAVALISSIATLHP-HLEDVKIAVEGNSSQDSAVAIASII-----------GESCPL 576
Query: 614 PELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPV 673
P F H + ++ +P +LL +K AFE I N+ + ASQ VS T++L DP+
Sbjct: 577 P-CAFVHTKDKTSSLQWPMYLLTNEKAKAFERLIYAVNTASLSASQVTVSNTIQLSFDPI 635
Query: 674 EYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLA 718
YL Q+ I+ + Y+GK+ +DD++VA++MA +LA
Sbjct: 636 LYLISQI-RAIKPIPLRDGTYTYTGKQRNLSDDVLVALVMAHFLA 679
>gi|30348532|emb|CAC84324.1| terminase [Saimiriine herpesvirus 2]
Length = 683
Score = 347 bits (891), Expect = 3e-94
Identities = 200/540 (37%), Positives = 310/540 (57%), Gaps = 23/540 (4%)
Query: 201 LELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPR 260
+E FQ +++H YFL ++ + ++ + F + ++ F+Q+A++FL+PR
Sbjct: 160 IEPFQLQLILHTFYFLISIKSPESTNRLFDIFKEYFGLKEMDSDMLQIFKQKASIFLIPR 219
Query: 261 RHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGE 320
RHGKTW +V +I++ L S I +GY AH + VF EI L+ WF S +D K
Sbjct: 220 RHGKTWIVVAIISMLLTSVENIHVGYVAHQKHVANSVFTEIINTLQKWFPSRYIDIKKEN 279
Query: 321 -TISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCK 379
TI + PD ST++ A+ N N IRGQ FNLL++DEANFI+ D++ I+GF+ Q + K
Sbjct: 280 GTIIYKSPDKKPSTLMCATCFNKNSIRGQTFNLLYIDEANFIKKDSLPAILGFMLQKDAK 339
Query: 380 IIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPV 439
+IF+SS N+G +TSFL+NL+ A++++LN+V YIC DH + +C CY L P
Sbjct: 340 LIFISSVNSGDRATSFLFNLKNASEKMLNIVNYICPDHKDDFSLQDSLISCPCYKLYIPT 399
Query: 440 FITMDGAVRRTADLFLPDSFMQEIIGGQAR-ETGDDRPVLTKSAGERFLLYRPSTTTN-- 496
+IT+D ++ T +LFL +F E++G + + V+++ A +F L R TT
Sbjct: 400 YITIDETIKNTTNLFLDGAFTTELMGDMSGISKSNMHKVISEMAITQFDLCRADTTKPEI 459
Query: 497 SGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDD---FIIFALEHFFLRALTGSAPAD 553
+ + +Y+Y+DPA+T N+ ASGTGI + +++ II +EH+FL+ LTG+A
Sbjct: 460 AQCLNSTMYIYIDPAYTNNSEASGTGIGAILTLKNNSSKCIIVGMEHYFLKDLTGTATYQ 519
Query: 554 IARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGPG 613
IA C + L L+P + V VAVEGNSSQDSAVAI+T ++ E I
Sbjct: 520 IASCACSLIRASLVLYP-HIQCVHVAVEGNSSQDSAVAISTLIN-ECSPI---------- 567
Query: 614 PELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPV 673
++ F H + + +P ++L +K+ AFE FI NSG + ASQ ++S T++L DP+
Sbjct: 568 -KVHFIHYKDKTTTMQWPIYMLGAEKSIAFESFIYAINSGTISASQSIISNTIKLSFDPI 626
Query: 674 EYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAAPTGIPPAFFPITRT 733
YL EQ+ + I Y K+ +DD++VAV+MA + A T F P+ T
Sbjct: 627 SYLIEQIRS-IRCYPLRDGSHTYCAKKRTVSDDVLVAVVMAYFFA--TSNKHIFKPLNST 683
>gi|9631219|ref|NP_048000.1| orf29a/b [Ateline herpesvirus 3]
gi|11278288|pir||T42943 hypothetical protein 29a/b - ateline
herpesvirus 3 (strain 73)
gi|4019255|gb|AAC95553.1| orf29a/b [Ateline herpesvirus 3]
Length = 683
Score = 346 bits (887), Expect = 1e-93
Identities = 196/527 (37%), Positives = 306/527 (57%), Gaps = 25/527 (4%)
Query: 201 LELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPR 260
+E FQ +++H YFL ++ + ++ + F + +++F+Q+A++FL+PR
Sbjct: 160 IEPFQLQLILHTFYFLISIKSPESTNKLFDIFKEYFGLGEMDSAMLQNFKQKASIFLIPR 219
Query: 261 RHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGE 320
RHGKTW +V +I++ + S + +GY AH + VF EI L+ WF S +D VK E
Sbjct: 220 RHGKTWIVVAIISMLITSVENLHVGYVAHQKHVANSVFTEIINTLQKWFPSKNID-VKKE 278
Query: 321 --TISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANC 378
TI + P ST++ AS N N IRGQ FNLL++DEANFI+ D++ I+GF+ Q +
Sbjct: 279 NGTIIYKIPGKKPSTLMCASCFNKNSIRGQTFNLLYIDEANFIKKDSLPAILGFMLQKDA 338
Query: 379 KIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKP 438
K+IF+SS N+G +TSFL+NL+ A++++LN+V YIC DH + +C CY L P
Sbjct: 339 KLIFISSVNSGDKATSFLFNLKNASEKMLNIVNYICPDHKDDFSLQDSLISCPCYKLYIP 398
Query: 439 VFITMDGAVRRTADLFLPDSFMQEIIGG-QARETGDDRPVLTKSAGERFLLYRPSTTTN- 496
+IT+D ++ T +LFL +F E++G + V+ ++A +F L R TT
Sbjct: 399 TYITIDETIKNTTNLFLDGAFTTELMGDISVMSKNNIHKVIGETALMQFDLCRIDTTKPE 458
Query: 497 -SGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDD---FIIFALEHFFLRALTGSAPA 552
+ + +Y+Y+DPA+T N+ ASGTGI + +++ II +EH+FL+ LTG+A
Sbjct: 459 ITQCLNSIMYLYIDPAYTNNSEASGTGIGAIIALKNNSSKCIIVGIEHYFLKDLTGTATY 518
Query: 553 DIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGP 612
IA C + L L+P ++V VAVEGNSSQDSAVAI+T + N
Sbjct: 519 QIASCACSLIRAALVLYP-HIQAVHVAVEGNSSQDSAVAISTFL-------------NEC 564
Query: 613 GP-ELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTD 671
P ++ F H + A+ +P ++L +K+ AFE FI NSG + ASQ ++S T++L D
Sbjct: 565 SPVKVNFMHYKDKTTAMQWPIYMLGSEKSQAFESFIYAINSGTISASQSIISNTIKLTFD 624
Query: 672 PVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLA 718
P+ YL EQ+ I Y K+ +DD++VAV+MA + +
Sbjct: 625 PISYLIEQI-RAIRCYPLRDGSHTYCAKKRTVSDDVLVAVVMAHFFS 670
>gi|6625593|gb|AAF19294.1|AF105037_26 29 [murid herpesvirus 4]
Length = 679
Score = 332 bits (852), Expect = 1e-89
Identities = 202/538 (37%), Positives = 301/538 (55%), Gaps = 26/538 (4%)
Query: 201 LELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPR 260
LE FQK +++H+ F+A++ + ++ + + ++ F +T + F Q++ FL+PR
Sbjct: 159 LEPFQKQLILHSFMFVASIKCPETTTKLFDEFKFLLDMLYFDNTDLLTFLQKSPAFLIPR 218
Query: 261 RHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGE 320
RHGKTW + +I++ L S + IGY AH + + VF EI L WF +D K
Sbjct: 219 RHGKTWIVTAIISMLLTSVDDLHIGYVAHQKHVSLAVFLEISNILLAWFPRKNIDIKKEN 278
Query: 321 -TISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCK 379
I +S P ST++ A+ N N IRGQ FNLLFVDEANFI+ +A+ I+GF+ Q + K
Sbjct: 279 GVILYSHPGKKSSTLMCATCFNKNSIRGQTFNLLFVDEANFIKKEALPAILGFMLQKDAK 338
Query: 380 IIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPV 439
I F+SS N+G+ +TSFLYNL+ A ++++NVV+Y+C +HM + TAC CY L P
Sbjct: 339 IFFISSVNSGEKTTSFLYNLKDANEKMVNVVSYVCSEHMEDFNKQSAITACPCYRLYVPE 398
Query: 440 FITMDGAVRRTADLFLPDSFMQEIIGG-QARETGDDRPVLTKSAGERFLLYRPSTTTNSG 498
FIT++ ++ T +L L SF E++G Q+ ++ +S+ R YR T +G
Sbjct: 399 FITINDNIKCTTNLLLEGSFATELMGNMQSHTEVSGNSMIHESSLTRLDFYRCDT---AG 455
Query: 499 LMAP----ELYVYVDPAFTANTRASGTGIAVVG--RYRDDFIIFALEHFFLRALTGSAPA 552
AP L+VY+DPA+ N ASGTGI + ++ II LEHFFL LTG+A
Sbjct: 456 QGAPTTENTLFVYIDPAYGNNVHASGTGIVAMSHCKHTKKCIILGLEHFFLNNLTGTAAH 515
Query: 553 DIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGP 612
+IA C L +L HP + +R +EGNS+QDSAVAIAT + H I
Sbjct: 516 NIASCATALLEGILFQHPW-IQEIRCIIEGNSNQDSAVAIATFI---SHNIKL------- 564
Query: 613 GPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDP 672
P L + + G + +P ++L+ KT AF+ FI N G + ASQ +VS TV L +DP
Sbjct: 565 -PTLFASYRDKTG--MQWPIYMLSGDKTLAFQNFISSLNQGLLCASQTVVSNTVLLSSDP 621
Query: 673 VEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAAPTGIPPAFFPI 730
+ YL EQ+ N N + + K + +DD+++A +M Y+ I F I
Sbjct: 622 ISYLIEQIKNTKCIYHKNKTI-TFQSKTHTMSDDVLIACVMTCYVMTTNKISYISFSI 678
>gi|9845374|ref|NP_064188.1| pR89 [Rat cytomegalovirus]
gi|9800303|gb|AAF99177.1|AF232689_74 pR89 [rat cytomegalovirus
Maastricht]
Length = 374
Score = 322 bits (825), Expect = 2e-86
Identities = 182/378 (48%), Positives = 251/378 (66%), Gaps = 16/378 (4%)
Query: 345 IRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAAD 404
IRGQ+FNLL VDEA+FI+ +A TI+GFL Q KIIF+SSTNT ST FL L A
Sbjct: 2 IRGQNFNLLIVDEAHFIKKEAFNTILGFLAQNTTKIIFISSTNTTSDSTCFLTKLTSAPF 61
Query: 405 ELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEII 464
++LNVV+Y+C++H+ +ATAC CY L+KP FIT++ VR+TA++F+P SFM EI+
Sbjct: 62 DMLNVVSYVCEEHIHAFSEKGDATACPCYRLHKPTFITLNSEVRKTANMFMPGSFMDEIM 121
Query: 465 GGQARETGDDRPVLTKSAGERFLLYRPSTTTNS--GLMAPELYVYVDPAFTANTRASGTG 522
GG + T ++ ++T + E F L+R STT + L VY+DPAFT+N RASGTG
Sbjct: 122 GGTNKIT-EEAVLITDESREEFDLFRYSTTNPQFHPHLGDHLSVYIDPAFTSNRRASGTG 180
Query: 523 IAVVGRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEG 582
+A VG YRD FI++ +EH+FL+ L S+ IA C H L +L+LHP FR VRV++EG
Sbjct: 181 VAAVGTYRDQFIVYGMEHYFLKDLLESSETAIADCASHMLLSILSLHP-FFRQVRVSIEG 239
Query: 583 NSSQDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPA 642
N +Q +AV IA ++ + A P +LLFYH P +L PF+L++K K A
Sbjct: 240 NLNQAAAVRIACNIKHNL--------AQRP-VQLLFYH-TPDQNEILQPFYLIHKDKRLA 289
Query: 643 FEYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNG 702
E FI KFNS V ASQELVS T++L DPVEY +QL + I+ ++ + V Y+ KR
Sbjct: 290 VEDFIGKFNSSYVKASQELVSHTIKLNYDPVEYFLDQLRH-IQRITLSEYV-TYTAKRAN 347
Query: 703 AADDLMVAVIMAIYLAAP 720
++DDL+VA+IMA+Y+ +P
Sbjct: 348 SSDDLVVALIMAVYMCSP 365
>gi|2909851|gb|AAC40814.1| UL89 protein [human herpesvirus 5]
Length = 378
Score = 311 bits (798), Expect = 2e-83
Identities = 172/376 (45%), Positives = 240/376 (63%), Gaps = 14/376 (3%)
Query: 345 IRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAAD 404
IRGQ+F+LL VDEA+FI+ +A TI+GFL Q KIIF+SSTNT +T FL L A
Sbjct: 2 IRGQNFHLLLVDEAHFIKKEAFNTILGFLAQNTTKIIFISSTNTTSDATCFLTRLNNAPF 61
Query: 405 ELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEII 464
++LNVV+Y+C++H+ +ATAC CY L+KP FI+++ VR+TA++F+P +FM EII
Sbjct: 62 DMLNVVSYVCEEHLHSFTEKGDATACPCYRLHKPTFISLNSQVRKTANMFMPGAFMDEII 121
Query: 465 GGQARETGDDRPVLTKSAGERFLLYRPST--TTNSGLMAPELYVYVDPAFTANTRASGTG 522
GG + + ++T + E F + R ST T LYVY+DPAFT N +ASGTG
Sbjct: 122 GG-TNKISQNTVLITDQSREEFDILRYSTLNTNAYDYFGKTLYVYLDPAFTTNRKASGTG 180
Query: 523 IAVVGRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEG 582
+A VG YR F+I+ LEHFFLR L+ S+ IA C H + VL+LHP +R+AVEG
Sbjct: 181 VAAVGAYRHQFLIYGLEHFFLRDLSESSEVAIAECAAHMIISVLSLHP-YLDELRIAVEG 239
Query: 583 NSSQDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPA 642
N++Q +AV IA ++ + + +LFYH P + PF+L+ + K A
Sbjct: 240 NTNQAAAVRIAC--------LIRQSVQSSTLIRVLFYH-TPDQNHIEQPFYLMGRDKALA 290
Query: 643 FEYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIE-TVSPNTDVRMYSGKRN 701
E FI +FNSG + ASQELVS T++L DP+EYL EQ+ NL T++ T R + ++N
Sbjct: 291 VEQFISRFNSGYIKASQELVSYTIKLSHDPIEYLLEQIQNLHRVTLAEGTTARYSAKRQN 350
Query: 702 GAADDLMVAVIMAIYL 717
+DDL++AVIMA YL
Sbjct: 351 RISDDLIIAVIMATYL 366
>gi|628161|pir||S33039 hypothetical protein - human herpesvirus 4
(fragment)
Length = 387
Score = 267 bits (683), Expect = 5e-70
Identities = 161/380 (42%), Positives = 224/380 (58%), Gaps = 20/380 (5%)
Query: 345 IRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAAD 404
IRGQ F+LLFVDEANFI+ +A+ I+GF+ Q + KIIF+SS N+ +TSFLY L+ A +
Sbjct: 11 IRGQTFHLLFVDEANFIKKEALPAILGFMLQKDAKIIFISSVNSADQATSFLYKLKDAQE 70
Query: 405 ELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEII 464
LLNVV+Y+C +H + +C C+ L+ P +ITMD +R T +LFL +F E++
Sbjct: 71 RLLNVVSYVCQEHRQDFDMQDSMVSCPCFRLHIPSYITMDSNIRATTNLFLDGAFSTELM 130
Query: 465 GG-QARETGDDRPVLTKSAGERFLLYRPSTTTN--SGLMAPELYVYVDPAFTANTRASGT 521
G + G + A + L R T +G +A LYVYVDPA+T NT ASGT
Sbjct: 131 GDTSSLSQGSLSRTVRDDAINQLELCRVDTLNPRVAGRLASSLYVYVDPAYTNNTSASGT 190
Query: 522 GIAVVGRYRDD---FIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSVRV 578
GIA V R D I+ LEHFFL+ LTG A IA CVV ++ ++ LHP V+V
Sbjct: 191 GIAAVTHDRADPNRVIVLGLEHFFLKDLTGDAALQIATCVVALVSSIVTLHP-HLEEVKV 249
Query: 579 AVEGNSSQDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLNKQ 638
AVEGNSSQDSAVAIA+ + G + P P F H + ++ +P +LL +
Sbjct: 250 AVEGNSSQDSAVAIASII-----------GESCPLP-CAFVHTKDKTSSLQWPMYLLTNE 297
Query: 639 KTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSG 698
K+ AFE I N+ + ASQ VS T++L DPV YL Q+ I+ + Y+G
Sbjct: 298 KSKAFERLIYAVNTASLSASQVTVSNTIQLSFDPVLYLISQI-RAIKPIPLRDGTYTYTG 356
Query: 699 KRNGAADDLMVAVIMAIYLA 718
K+ +DD++VA++MA +LA
Sbjct: 357 KQRNLSDDVLVALVMAHFLA 376
>gi|17940712|gb|AAL49732.1| DNA packaging protein [human herpesvirus
1]
Length = 123
Score = 247 bits (630), Expect = 6e-64
Identities = 121/123 (98%), Positives = 122/123 (98%)
Query: 386 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 445
TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG
Sbjct: 1 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 60
Query: 446 AVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPELY 505
AVRRTADLFL DSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNSGLMAP+LY
Sbjct: 61 AVRRTADLFLADSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPDLY 120
Query: 506 VYV 508
VYV
Sbjct: 121 VYV 123
>gi|9628362|ref|NP_042953.1| DNA packaging protein [Human
herpesvirus 6]
gi|11346510|pir||T44020 hypothetical protein U60 [imported] - human
herpesvirus 6 (strain HST)
gi|854039|emb|CAA58352.1| U60, late spliced gene(U60 /66) [Human
herpesvirus 6]
gi|4996048|dbj|BAA78281.1| late spliced gene (U60/66); 100%
identical to U60 gene of strain U1102 of HHV-6 [Human
herpesvirus 6]
Length = 322
Score = 246 bits (629), Expect = 8e-64
Identities = 135/323 (41%), Positives = 201/323 (61%), Gaps = 15/323 (4%)
Query: 399 LRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDS 458
L + E+L+VV+Y+C+DH + NATACSCY L+KP FI+++ V++TA+LFL +
Sbjct: 3 LNNSPFEMLSVVSYVCEDHAHMLNERGNATACSCYRLHKPKFISINAEVKKTANLFLEGA 62
Query: 459 FMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNSGL--MAPELYVYVDPAFTANT 516
F+ EI+GG +D ++T+ F +R ST + + + +LYVY+DPA+T N
Sbjct: 63 FIHEIMGGATCNVIND-VLITEQGQTEFEFFRYSTINKNLIPFLGKDLYVYLDPAYTGNR 121
Query: 517 RASGTGIAVVGRYRDDFIIFALEHFFLRALTGSAPADIARCVVHSLAQVLALHPGAFRSV 576
RASGTGIA +G Y D +I++ +EH+FL +L S+ IA C H + +L LHP F V
Sbjct: 122 RASGTGIAAIGTYLDQYIVYGMEHYFLESLMTSSDTAIAECAAHMILSILDLHP-FFTEV 180
Query: 577 RVAVEGNSSQDSAVAIATHVHTEMHRILASAGANGPGPELLFYHCEPPGGAVLYPFFLLN 636
++ +EGNS+Q SAV IA + I A+ ++ F+H P + PF+LL
Sbjct: 181 KIIIEGNSNQASAVKIACII---KENITANKSI-----QVTFFH-TPDQNQIAQPFYLLG 231
Query: 637 KQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMY 696
K+K A E+FI FNSG + ASQEL+S T+++ DPVEY EQ+ N I +S N + Y
Sbjct: 232 KEKKLAVEFFISNFNSGNIKASQELISFTIKITYDPVEYALEQIRN-IHQISVNNYI-TY 289
Query: 697 SGKRNGAADDLMVAVIMAIYLAA 719
S K+ +DDL++A+IMAIY+ +
Sbjct: 290 SAKKQACSDDLIIAIIMAIYVCS 312
>gi|20303007|gb|AAM18956.1|AF499021_1 terminase [Cercopithecine
herpesvirus 2]
Length = 121
Score = 234 bits (596), Expect = 6e-60
Identities = 114/121 (94%), Positives = 116/121 (95%)
Query: 386 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 445
TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG
Sbjct: 1 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 60
Query: 446 AVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPELY 505
A+RRTADLFL DSFMQEIIGGQ+RE DDRPVLTK AGERFLLYRPSTTTN GLMAPELY
Sbjct: 61 ALRRTADLFLADSFMQEIIGGQSREAADDRPVLTKPAGERFLLYRPSTTTNGGLMAPELY 120
Query: 506 V 506
V
Sbjct: 121 V 121
>gi|20303005|gb|AAM18955.1|AF499020_1 terminase [Cercopithecine
herpesvirus 1]
Length = 121
Score = 233 bits (595), Expect = 7e-60
Identities = 114/121 (94%), Positives = 116/121 (95%)
Query: 386 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 445
TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG
Sbjct: 1 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 60
Query: 446 AVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPELY 505
A+RRTADLFL DSFMQEIIGGQ+RE DDRPVLTK AGERFLLYRPSTTTN GLMAPELY
Sbjct: 61 ALRRTADLFLADSFMQEIIGGQSREADDDRPVLTKPAGERFLLYRPSTTTNGGLMAPELY 120
Query: 506 V 506
V
Sbjct: 121 V 121
>gi|20303009|gb|AAM18957.1|AF499022_1 terminase [Baboon herpesvirus
2]
Length = 121
Score = 230 bits (587), Expect = 6e-59
Identities = 113/121 (93%), Positives = 115/121 (94%)
Query: 386 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 445
TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG
Sbjct: 1 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 60
Query: 446 AVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPELY 505
A+RRTADLFL DSFMQEIIGGQ+RE DRPVLTK AGERFLLYRPSTTTN GLMAPELY
Sbjct: 61 ALRRTADLFLADSFMQEIIGGQSREADADRPVLTKPAGERFLLYRPSTTTNGGLMAPELY 120
Query: 506 V 506
V
Sbjct: 121 V 121
>gi|24943111|ref|NP_733873.1| ORF20 [Callitrichine herpesvirus 3]
gi|13676662|gb|AAK38228.1|AF319782_22 ORF20 [callitrichine
herpesvirus 3]
Length = 350
Score = 228 bits (580), Expect = 4e-58
Identities = 140/351 (39%), Positives = 201/351 (56%), Gaps = 22/351 (6%)
Query: 375 QANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYI 434
Q + KIIF+SSTN+ +TSFLY L+ A + LLNVV+Y+CDDH + AC C+
Sbjct: 3 QKDAKIIFISSTNSSDQATSFLYRLKDAHERLLNVVSYVCDDHREEFDMQDSMVACPCFR 62
Query: 435 LNKPVFITMDGAVRRTADLFLPDSFMQEIIGG--QARETGDDRPVLTKSAGERFLLYRPS 492
L P +IT+D +R T +LFL +F E++G E G R ++ + A + L R +
Sbjct: 63 LRIPCYITLDINIRTTTNLFLEGAFSTELMGDATSIAEQGLSR-IIGEEALTQLELCRVN 121
Query: 493 TTTNSGL--MAPELYVYVDPAFTANTRASGTGIAVVGRYRDD---FIIFALEHFFLRALT 547
T S + + LYVY+DPA+T NT ASGTGIA V R + +I LEHFFL+ LT
Sbjct: 122 TLEKSVVDRLGSTLYVYIDPAYTNNTSASGTGIAAVTLARHNPTRVVILGLEHFFLKDLT 181
Query: 548 GSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASA 607
G A IA C ++ +++LHP VRVAVEGNSSQD+AVAIAT +
Sbjct: 182 GDASLQIATCTQTLISSIVSLHP-HLTEVRVAVEGNSSQDAAVAIAT---------ILDD 231
Query: 608 GANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVR 667
N P LF H + + +P +LL +K+ AFE FI N+ + ASQ + S T++
Sbjct: 232 ICNLP---CLFVHTQDKASNLHWPMYLLTGEKSKAFEAFIYAVNTASISASQVITSNTIQ 288
Query: 668 LQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLA 718
L DP+ YL Q+ I+++ Y+GK+ +DD++V++++ YLA
Sbjct: 289 LSYDPISYLVSQI-KAIKSIPLRDGTYTYTGKQKNLSDDVLVSLVLVHYLA 338
>gi|7330018|gb|AAF60007.1|AF210726_28 packaging protein [Macaca
mulatta rhadinovirus 26-95]
Length = 348
Score = 222 bits (566), Expect = 2e-56
Identities = 138/349 (39%), Positives = 190/349 (53%), Gaps = 19/349 (5%)
Query: 375 QANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYI 434
Q + K+IF+SS+N+ STSFL NL+ A +++LNVV Y+C DH AC CY
Sbjct: 3 QKDAKLIFISSSNSSDKSTSFLLNLKDAHEKMLNVVNYVCPDHKDDFNLQDTVVACPCYR 62
Query: 435 LNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTT 494
L+ P +IT+D VR T +LFL +F E++G A +++ S+ + L R +T
Sbjct: 63 LHIPAYITIDETVRSTTNLFLEGAFSTELMGDAATSAQSMHKIVSDSSLSQLDLCRVEST 122
Query: 495 TN--SGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDF---IIFALEHFFLRALTGS 549
+ G M P L+VY+DPA+T NT ASGTGI V I+ +EHFFLR LTG+
Sbjct: 123 SQDIQGAMKPCLHVYIDPAYTNNTDASGTGIGAVIAVNHKVIKCILLGVEHFFLRDLTGT 182
Query: 550 APADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGA 609
A IA C + ++ LHP V VAVEGNSSQD+ VAIAT V E+ +
Sbjct: 183 AAYQIASCAAALIRAIVTLHP-QITHVNVAVEGNSSQDAGVAIAT-VLNEICSV------ 234
Query: 610 NGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQ 669
L F H + P ++L +K AFE FI NSG ASQ +VS T++L
Sbjct: 235 -----PLSFLHHADKNTLIRSPIYMLGPEKAKAFESFIYALNSGTFSASQTVVSHTIKLS 289
Query: 670 TDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLA 718
DPV YL +Q+ I + Y K+ +DD++VA +MA Y+A
Sbjct: 290 FDPVAYLIDQI-KAIRCIPLKDGGHTYCAKQKTMSDDVLVAAVMAHYMA 337
>gi|18653835|ref|NP_570769.1| unknown [Macaca mulatta rhadinovirus]
gi|4494933|gb|AAD21355.1| unknown [Macaca mulatta rhadinovirus
17577]
Length = 348
Score = 222 bits (565), Expect = 2e-56
Identities = 138/349 (39%), Positives = 190/349 (53%), Gaps = 19/349 (5%)
Query: 375 QANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYI 434
Q + K+IF+SS+N+ STSFL NL+ A +++LNVV Y+C DH AC CY
Sbjct: 3 QKDAKLIFISSSNSSDKSTSFLLNLKDAHEKMLNVVNYVCPDHKDDFNLQDTVVACPCYR 62
Query: 435 LNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTT 494
L+ P +IT+D VR T +LFL +F E++G A +++ S+ + L R +T
Sbjct: 63 LHIPAYITIDETVRSTTNLFLEGAFSTELMGDAATSAQSMHKIVSDSSLSQLDLCRVKST 122
Query: 495 TN--SGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDF---IIFALEHFFLRALTGS 549
+ G M P L+VY+DPA+T NT ASGTGI V I+ +EHFFLR LTG+
Sbjct: 123 SQDIQGAMKPCLHVYIDPAYTNNTDASGTGIGAVIAVNHKVIKCILLGVEHFFLRDLTGT 182
Query: 550 APADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAGA 609
A IA C + ++ LHP V VAVEGNSSQD+ VAIAT V E+ +
Sbjct: 183 AAYQIASCAAALIRAIVTLHP-QITHVNVAVEGNSSQDAGVAIAT-VLNEICSV------ 234
Query: 610 NGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRLQ 669
L F H + P ++L +K AFE FI NSG ASQ +VS T++L
Sbjct: 235 -----PLSFLHHVDKNTLIRSPIYMLGPEKAKAFESFIYALNSGTFSASQTVVSHTIKLS 289
Query: 670 TDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLA 718
DPV YL +Q+ I + Y K+ +DD++VA +MA Y+A
Sbjct: 290 FDPVAYLIDQI-KAIRCIPLKDGGHTYCAKQKTMSDDVLVAAVMAHYMA 337
>gi|18845995|ref|NP_572081.1| ORF 29b; packaging protein homolog;
EBV BDRF1 homolog [Human herpesvirus 8]
gi|1718281|gb|AAC57110.1| ORF 29b; packaging protein homolog; EBV
BDRF1 homolog [Human herpesvirus 8]
gi|2246515|gb|AAB62640.1| ORF 29b, HSV UL15 exon 2 homolog, in
herpes simplex this ORF is translated separately [Human
herpesvirus 8]
gi|15341343|gb|AAK95622.1|AF402654_2 immediate early protein ORF29b
[Human herpesvirus 8]
Length = 351
Score = 221 bits (563), Expect = 4e-56
Identities = 137/350 (39%), Positives = 198/350 (56%), Gaps = 20/350 (5%)
Query: 375 QANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYI 434
Q + K+IF+SS N+ STSFL NLR A +++LNVV+Y+C DH +C CY
Sbjct: 3 QKDAKLIFISSVNSSDRSTSFLLNLRNAQEKMLNVVSYVCADHREDFHLQDALVSCPCYR 62
Query: 435 LNKPVFITMDGAVRRTADLFLPDSFMQEIIG-GQARETGDDRPVLTKSAGERFLLYRPST 493
L+ P +IT+D +++ T +LF+ +F E++G G A V+ +A +F + R T
Sbjct: 63 LHIPTYITIDESIKTTTNLFMEGAFDTELMGEGAASSNATLYRVVGDAALTQFDMCRVDT 122
Query: 494 TTN--SGLMAPELYVYVDPAFTANTRASGTGIAVV---GRYRDDFIIFALEHFFLRALTG 548
T + +L+VY+DPA+T NT ASGTG+ V + +I +EHFFLR LTG
Sbjct: 123 TAQQVQKCLGKQLFVYIDPAYTNNTEASGTGVGAVVTSTQTPTRSLILGMEHFFLRDLTG 182
Query: 549 SAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAG 608
+A +IA C + + LHP V AVEGNSSQDS VAIAT ++
Sbjct: 183 AAAYEIASCACTMIKAIAVLHP-TIERVNAAVEGNSSQDSGVAIATVLNEIC-------- 233
Query: 609 ANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVRL 668
P P + F H A+ +P ++L +K+ AFE FI NSG + ASQ +VS T+++
Sbjct: 234 ---PLP-IHFLHYTDKSSALQWPIYMLGGEKSSAFETFIYALNSGTLSASQTVVSNTIKI 289
Query: 669 QTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLA 718
DPV YL EQ+ I+ V + YS K+ +DDL+VAV+MA ++A
Sbjct: 290 SFDPVTYLVEQV-RAIKCVPLRDGGQSYSAKQKHMSDDLLVAVVMAHFMA 338
>gi|9628031|ref|NP_042625.1| ORF 29b; possible terminase; ORF 29a
and 29b probably expressed as a spliced mRNA [Equine
herpesvirus 2]
gi|1360791|pir||S55623 hypothetical protein 29b - equine
herpesvirus 2
gi|695201|gb|AAC13816.1| ORF 29b; possible terminase; ORF 29a and
29b probably expressed as a spliced mRNA
Length = 352
Score = 218 bits (555), Expect = 3e-55
Identities = 132/352 (37%), Positives = 188/352 (52%), Gaps = 24/352 (6%)
Query: 375 QANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYI 434
Q + KIIF+SS N+ +TSFLYNL+ A +++LNVV Y+C H + +C CY
Sbjct: 3 QKDAKIIFISSVNSSDQTTSFLYNLKNAKEKMLNVVNYVCPQHREDFSLQESVVSCPCYR 62
Query: 435 LNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTT 494
L+ P +I +D ++ T +LF+ +F E++G A T + K GE L+
Sbjct: 63 LHIPTYIAIDENIKDTTNLFMEGAFTTELMGDGAAATTQTN--MHKVVGEPALVQFDLCR 120
Query: 495 TNSGL------MAPELYVYVDPAFTANTRASGTGIAVVGRYR--DDFIIFALEHFFLRAL 546
++G + P L++YVDPA+T NT ASGTG+ V + D ++ +EHFFL+ L
Sbjct: 121 VDTGSPEAQRGLNPTLFLYVDPAYTNNTEASGTGMGAVVSMKNSDRCVVVGVEHFFLKEL 180
Query: 547 TGSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILAS 606
TG++ IA C + + LHP R VA+EGNSSQDSAVAIAT +H
Sbjct: 181 TGASSLQIASCAAALIRSLATLHP-FVREAHVAIEGNSSQDSAVAIATLLH--------- 230
Query: 607 AGANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTV 666
P P +H + G V +P ++L +K AFE FI NS + Q +VS T+
Sbjct: 231 --ERSPLPVKFLHHADKATG-VQWPMYILGAEKARAFETFIYALNSNTLSCGQAIVSNTI 287
Query: 667 RLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLA 718
+L DPV YL EQ+ I+ Y K G +DD +VAV+MA Y A
Sbjct: 288 KLSFDPVAYLIEQI-RAIKCYPLKDGTVSYCAKHKGGSDDTLVAVVMAHYFA 338
>gi|9631221|ref|NP_048001.1| orf 29B [Ateline herpesvirus 3]
gi|4019257|gb|AAC95555.1| orf 29B [Ateline herpesvirus 3]
Length = 351
Score = 215 bits (548), Expect = 2e-54
Identities = 129/351 (36%), Positives = 200/351 (56%), Gaps = 22/351 (6%)
Query: 375 QANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYI 434
Q + K+IF+SS N+G +TSFL+NL+ A++++LN+V YIC DH + +C CY
Sbjct: 3 QKDAKLIFISSVNSGDKATSFLFNLKNASEKMLNIVNYICPDHKDDFSLQDSLISCPCYK 62
Query: 435 LNKPVFITMDGAVRRTADLFLPDSFMQEIIGG-QARETGDDRPVLTKSAGERFLLYRPST 493
L P +IT+D ++ T +LFL +F E++G + V+ ++A +F L R T
Sbjct: 63 LYIPTYITIDETIKNTTNLFLDGAFTTELMGDISVMSKNNIHKVIGETALMQFDLCRIDT 122
Query: 494 TTN--SGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDD---FIIFALEHFFLRALTG 548
T + + +Y+Y+DPA+T N+ ASGTGI + +++ II +EH+FL+ LTG
Sbjct: 123 TKPEITQCLNSIMYLYIDPAYTNNSEASGTGIGAIIALKNNSSKCIIVGIEHYFLKDLTG 182
Query: 549 SAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAG 608
+A IA C + L L+P ++V VAVEGNSSQDSAVAI+T +
Sbjct: 183 TATYQIASCACSLIRAALVLYP-HIQAVHVAVEGNSSQDSAVAISTFL------------ 229
Query: 609 ANGPGP-ELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVR 667
N P ++ F H + A+ +P ++L +K+ AFE FI NSG + ASQ ++S T++
Sbjct: 230 -NECSPVKVNFMHYKDKTTAMQWPIYMLGSEKSQAFESFIYAINSGTISASQSIISNTIK 288
Query: 668 LQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLA 718
L DP+ YL EQ+ I Y K+ +DD++VAV+MA + +
Sbjct: 289 LTFDPISYLIEQI-RAIRCYPLRDGSHTYCAKKRTVSDDVLVAVVMAHFFS 338
>gi|9629607|ref|NP_044866.1| packaging protein [murid herpesvirus 4]
gi|2317977|gb|AAB66435.1| packaging protein [murid herpesvirus 4]
Length = 348
Score = 209 bits (531), Expect = 2e-52
Identities = 135/363 (37%), Positives = 198/363 (54%), Gaps = 25/363 (6%)
Query: 375 QANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYI 434
Q + KI F+SS N+G+ +TSFLYNL+ A ++++NVV+Y+C +HM + TAC CY
Sbjct: 3 QKDAKIFFISSVNSGEKTTSFLYNLKDANEKMVNVVSYVCSEHMEDFNKQSAITACPCYR 62
Query: 435 LNKPVFITMDGAVRRTADLFLPDSFMQEIIGG-QARETGDDRPVLTKSAGERFLLYRPST 493
L P FIT++ ++ T +L L SF E++G Q+ ++ +S+ R YR T
Sbjct: 63 LYVPEFITINDNIKCTTNLLLEGSFATELMGNMQSHTEVSGNSMIHESSLTRLDFYRCDT 122
Query: 494 TTNSGLMAP----ELYVYVDPAFTANTRASGTGIAVVG--RYRDDFIIFALEHFFLRALT 547
+G AP L+VY+DPA+ N ASGTGI + ++ II LEHFFL LT
Sbjct: 123 ---AGQGAPTTENTLFVYIDPAYGNNVHASGTGIVAMSHCKHTKKCIILGLEHFFLNNLT 179
Query: 548 GSAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASA 607
G+A +IA C L +L HP + +R +EGNS+QDSAVAIAT + H I
Sbjct: 180 GTAAHNIASCATALLEGILFQHPW-IQEIRCIIEGNSNQDSAVAIATFI---SHNIKL-- 233
Query: 608 GANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFEYFIKKFNSGGVMASQELVSVTVR 667
P L + + G + +P ++L+ KT AF+ FI N G + ASQ +VS TV
Sbjct: 234 ------PTLFASYRDKTG--MQWPIYMLSGDKTLAFQNFISSLNQGLLCASQTVVSNTVL 285
Query: 668 LQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAAPTGIPPAF 727
L +DP+ YL EQ+ N N + + K + +DD+++A +M Y+ I
Sbjct: 286 LSSDPISYLIEQIKNTKCIYHKNKTI-TFQSKTHTMSDDVLIACVMTCYVMTTNKISYIS 344
Query: 728 FPI 730
F I
Sbjct: 345 FSI 347
>gi|19569593|gb|AAL92110.1|AF486631_1 terminase [Bovine herpesvirus
2]
Length = 121
Score = 206 bits (525), Expect = 9e-52
Identities = 100/121 (82%), Positives = 107/121 (87%)
Query: 386 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 445
TNTGKASTSFLYNLRG+AD LLNVVTYICDDHMP+VVTHT+ATACSCY+LNKPVFI MDG
Sbjct: 1 TNTGKASTSFLYNLRGSADALLNVVTYICDDHMPKVVTHTDATACSCYVLNKPVFIAMDG 60
Query: 446 AVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPELY 505
A+RRTADLFL DSFMQEIIGG G DRPVLT+ AG+RFLLYRPST NS LM PELY
Sbjct: 61 ALRRTADLFLADSFMQEIIGGVVHCEGRDRPVLTRPAGDRFLLYRPSTANNSSLMEPELY 120
Query: 506 V 506
V
Sbjct: 121 V 121
>gi|22087523|gb|AAM90958.1|AF514778_1 putative DNA packaging protein
[Equine herpesvirus 3]
Length = 124
Score = 197 bits (500), Expect = 7e-49
Identities = 96/124 (77%), Positives = 106/124 (85%), Gaps = 1/124 (0%)
Query: 386 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 445
TNTGKASTSFLYNL+GAADELLNVVTYICDDHM RV HTNATACSCYILNKPVFITMDG
Sbjct: 1 TNTGKASTSFLYNLKGAADELLNVVTYICDDHMERVKAHTNATACSCYILNKPVFITMDG 60
Query: 446 AVRRTADLFLPDSFMQEIIGGQARETGD-DRPVLTKSAGERFLLYRPSTTTNSGLMAPEL 504
A+R TA+LFLPDSFMQEIIGG D PV T++AG+RFLLYRPST N +++P+L
Sbjct: 61 AMRNTAELFLPDSFMQEIIGGGGVVGAQRDEPVFTRTAGDRFLLYRPSTVANQAVLSPDL 120
Query: 505 YVYV 508
YVYV
Sbjct: 121 YVYV 124
>gi|3378226|gb|AAC28474.1| terminase [Feline herpesvirus 1]
gi|3378236|gb|AAC28477.1| terminase [Feline herpesvirus 1]
gi|3378241|gb|AAC28479.1| terminase [Feline herpesvirus 1]
gi|3378249|gb|AAC28481.1| terminase [Feline herpesvirus 1]
gi|3378252|gb|AAC28482.1| terminase [Feline herpesvirus 1]
gi|3378255|gb|AAC28483.1| terminase [Feline herpesvirus 1]
gi|3378258|gb|AAC28484.1| terminase [Feline herpesvirus 1]
Length = 123
Score = 187 bits (475), Expect = 6e-46
Identities = 88/123 (71%), Positives = 104/123 (84%)
Query: 386 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 445
TNTGK+STSFLYNLRGAADELLNVVTYICD+HM RV+THTNATACSCYILNKPVFITMD
Sbjct: 1 TNTGKSSTSFLYNLRGAADELLNVVTYICDEHMQRVLTHTNATACSCYILNKPVFITMDS 60
Query: 446 AVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPELY 505
A+R TA+LFL DSF+QEIIGG + V TK+AGERF++YRPST N +++ +LY
Sbjct: 61 AMRNTAELFLQDSFLQEIIGGGPSHKTNTELVFTKTAGERFMIYRPSTVANQSVLSTDLY 120
Query: 506 VYV 508
+Y+
Sbjct: 121 MYI 123
>gi|9945300|gb|AAC67575.3| putative DNA packaging protein UL89
[Rhesus cytomegalovirus]
Length = 194
Score = 184 bits (466), Expect = 7e-45
Identities = 95/195 (48%), Positives = 131/195 (66%), Gaps = 3/195 (1%)
Query: 355 VDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYIC 414
VDEA+FI+ +A TI+GFL Q KIIF+SSTNT +T FL L A ++LNVV+Y+C
Sbjct: 1 VDEAHFIKKEAFNTILGFLAQNTTKIIFISSTNTTSDATCFLTRLNNAPFDMLNVVSYVC 60
Query: 415 DDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDD 474
++H+ +ATAC CY L+KP FI+++ VR+TA++F+P SFM EIIGG + T +
Sbjct: 61 EEHLHTFTEKGDATACPCYRLHKPTFISLNSQVRKTANMFMPGSFMDEIIGGTNKIT-ES 119
Query: 475 RPVLTKSAGERFLLYRPSTTTNSGL--MAPELYVYVDPAFTANTRASGTGIAVVGRYRDD 532
++T + + F + R ST + +YVY+DPAFT N +ASGTGIA VG YR
Sbjct: 120 NVLITDQSRDEFDILRYSTLNVNAQEHFGKTIYVYLDPAFTTNRKASGTGIAAVGLYRHQ 179
Query: 533 FIIFALEHFFLRALT 547
FII+ LEH+FLR L+
Sbjct: 180 FIIYGLEHYFLRDLS 194
>gi|6319210|gb|AAF07209.1|AF196647_1 terminase [bottlenose dolphin
herpesvirus]
Length = 125
Score = 183 bits (464), Expect = 1e-44
Identities = 88/125 (70%), Positives = 106/125 (84%), Gaps = 2/125 (1%)
Query: 386 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 445
TNTGKASTSFL+NL+ ++D+LLNVVTYICD+HM RV HTNATACSCY+LNKPVFITMD
Sbjct: 1 TNTGKASTSFLFNLKYSSDDLLNVVTYICDEHMDRVRVHTNATACSCYVLNKPVFITMDA 60
Query: 446 AVRRTADLFLPDSFMQEIIGGQARE--TGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPE 503
++R TA++FLP+SFMQEIIGG + + G D PV TK+A ++FLLYRPSTTT G MA E
Sbjct: 61 SMRNTAEMFLPNSFMQEIIGGGSADPAAGGDGPVFTKAAADQFLLYRPSTTTRRGAMAEE 120
Query: 504 LYVYV 508
L+VYV
Sbjct: 121 LFVYV 125
>gi|1066209|emb|CAA62042.1| putative DNA packaging protein [Canine
herpesvirus]
Length = 155
Score = 178 bits (452), Expect = 3e-43
Identities = 85/156 (54%), Positives = 111/156 (70%), Gaps = 1/156 (0%)
Query: 489 YRPSTTTNSGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDDFIIFALEHFFLRALTG 548
YRPS+ TN L++P LY+Y+DPAFT N++ASGTGIA+VGRY ++IIF LEHFFL+ALTG
Sbjct: 1 YRPSSVTNQSLLSPNLYMYIDPAFTTNSKASGTGIAIVGRYNANWIIFGLEHFFLKALTG 60
Query: 549 SAPADIARCVVHSLAQVLALHPGAFRSVRVAVEGNSSQDSAVAIATHVHTEMHRILASAG 608
+ +I +C LAQ+ ALH F ++ +A+EGNSSQDSAVAI+ + ++ L A
Sbjct: 61 CSSEEIGKCATQCLAQIFALHNQPFGTINIAIEGNSSQDSAVAISQFIQRDLDS-LKDAN 119
Query: 609 ANGPGPELLFYHCEPPGGAVLYPFFLLNKQKTPAFE 644
+LFYHC PPG + YPFFLL KQKT AF+
Sbjct: 120 VVPMPHTILFYHCIPPGSNIAYPFFLLQKQKTGAFD 155
>gi|33359657|gb|AAQ17076.1| terminase [Psittacid herpesvirus 1]
Length = 123
Score = 141 bits (356), Expect = 4e-32
Identities = 65/111 (58%), Positives = 84/111 (75%)
Query: 386 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 445
TNTG++STS LYNL+G+++ LLNVVTYICDDH+P V N T CSCY+L KPV++TMD
Sbjct: 1 TNTGQSSTSLLYNLKGSSNSLLNVVTYICDDHLPEVQQRQNVTTCSCYVLQKPVYVTMDH 60
Query: 446 AVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTN 496
+VR TA+LF+ DSFM EI GGQ T R V+ A ++FL+YRPST+ +
Sbjct: 61 SVRNTAELFVKDSFMNEIAGGQVGNTLSARSVIASRAMDQFLVYRPSTSNS 111
>gi|2909852|gb|AAC40815.1| UL889 protein [human herpesvirus 5]
Length = 296
Score = 137 bits (344), Expect = 9e-31
Identities = 98/301 (32%), Positives = 143/301 (46%), Gaps = 38/301 (12%)
Query: 45 FLDFATATPKRHQTVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTA 104
F + A KR+Q + P +G H C E F L+ R RD+ +
Sbjct: 32 FTNVAALCRKRYQMMHPELGLAHSCNE------------AFLPLMAFCGRHRDYNSPEES 79
Query: 105 KLEFLAPELVR-AVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDF 163
+ E L E ++ A+ L FR C+ E + A Y L+ L+R F+Q+ +F+ DF
Sbjct: 80 QRELLFHERLKSALDELTFRPCSEE-----QRASYQKLDALTELYRDPQFQQINNFMTDF 134
Query: 164 AQLLKTSFRASSLAETTGPPKKRAKVDVATHGQTYGT-LELFQKMILMHATYFLAAVLLG 222
+ L F A G LE FQK +L+H +F+A +
Sbjct: 135 KKWLDGGF------------------STAVEGDAKAIRLEPFQKNLLIHVIFFIAVTKIP 176
Query: 223 DHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGI 282
A +V +L F+I S T++ F+Q+ATVFLVPRRHGKTWF++P+I+ L GI
Sbjct: 177 VLANRVLQYLIHAFQIDFLSQTSIDIFKQKATVFLVPRRHGKTWFIIPIISFLLKHMIGI 236
Query: 283 KIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNT 342
IGY AH + ++ V E++ R F V K IS G++ST +FAS +NT
Sbjct: 237 SIGYVAHQKHVSQFVLKEVEFRCRHTFARDYVVENKDNVISIDH-RGAKSTALFASCYNT 295
Query: 343 N 343
N
Sbjct: 296 N 296
>gi|9845380|ref|NP_064194.1| pR89 [Rat cytomegalovirus]
gi|9800309|gb|AAF99183.1|AF232689_80 pR89 [rat cytomegalovirus
Maastricht]
Length = 296
Score = 134 bits (338), Expect = 5e-30
Identities = 98/299 (32%), Positives = 145/299 (47%), Gaps = 34/299 (11%)
Query: 45 FLDFATATPKRHQTVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTA 104
F D KR+QTV P +G + C E F+A+ R + Q R + H
Sbjct: 32 FPDVGVFCRKRYQTVHPELGLTNACNE---TFTALKRFCV-------QYRDYNESIPHAN 81
Query: 105 KLEFLAPELVRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFA 164
E + PEL R + +RF+ C P+ + Y S +N F L+R F Q+V+F++DF
Sbjct: 82 VFE-ITPELSRTLDAVRFQPCPPD-----QREYRSKMNAFTDLYRDAEFIQIVNFLQDFE 135
Query: 165 QLLKTSFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDH 224
+ + L + T P ++A+V LE FQ+ +L H +FLA
Sbjct: 136 RWI-----TDGLGDAT--PDRKARV----------YLEPFQRNLLAHVLFFLATTKNPTM 178
Query: 225 AEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKI 284
A +V +L F + S ++ F+Q+ATVFLVPRRHGKTWF +P+I L + GI I
Sbjct: 179 ANRVTEYLTHAFNLHFLSSQSIDLFKQKATVFLVPRRHGKTWFTIPVICFLLKNIIGISI 238
Query: 285 GYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTN 343
GY AH + ++ V E++ R F K +S ++ST +FAS NTN
Sbjct: 239 GYVAHQKHVSQYVLKEVEFRCRRLFQGRYAVENKDNVVSVDHRT-AKSTALFASCFNTN 296
>gi|28804711|dbj|BAC58112.1| DNA packaging protein [Baboon
herpesvirus 2]
Length = 80
Score = 117 bits (293), Expect = 8e-25
Identities = 59/79 (74%), Positives = 68/79 (85%)
Query: 656 MASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAI 715
MASQE+VSVT+RLQTDPVEYL+ QLNNL ET+SPN+D R YSGKRNGA+DDLMVAVIMA+
Sbjct: 1 MASQEVVSVTMRLQTDPVEYLTAQLNNLTETLSPNSDARSYSGKRNGASDDLMVAVIMAV 60
Query: 716 YLAAPTGIPPAFFPITRTS 734
YLAA AF P+TRT+
Sbjct: 61 YLAAAPHAHHAFAPLTRTT 79
>gi|28804705|dbj|BAC58107.1| DNA packaging protein [Cercopithecine
herpesvirus 1]
Length = 84
Score = 113 bits (283), Expect = 1e-23
Identities = 58/77 (75%), Positives = 65/77 (84%)
Query: 656 MASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAI 715
MASQE+VSVT+RLQTDPVEYL+ QLNNL E +SPN+D R YSGKRNGA+DDLMVAVIMA+
Sbjct: 1 MASQEVVSVTMRLQTDPVEYLTAQLNNLTEILSPNSDARSYSGKRNGASDDLMVAVIMAV 60
Query: 716 YLAAPTGIPPAFFPITR 732
YLAA AF PITR
Sbjct: 61 YLAATPHAHHAFAPITR 77
>gi|28804717|dbj|BAC58117.1| DNA packaging protein [Cercopithecine
herpesvirus 2]
Length = 80
Score = 113 bits (282), Expect = 1e-23
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 656 MASQELVSVTVRLQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAI 715
MASQE+VSVT+RLQTDPVEYL+ QL+NL ET++PN+D R YSGKRNGA+DDLMVAVIMA+
Sbjct: 1 MASQEVVSVTMRLQTDPVEYLTAQLDNLTETLAPNSDARSYSGKRNGASDDLMVAVIMAV 60
Query: 716 YLAAPTGIPPAFFPITRTS 734
YLAA AF PITR +
Sbjct: 61 YLAATPHAHHAFAPITRAA 79
>gi|11278291|pir||T44026 hypothetical protein U66 [imported] - human
herpesvirus 6 (strain HST)
gi|4996054|dbj|BAA78287.1| late spliced gene (U60/66); 97.4%
identical to U66 gene of strain U1102 of HHV-6 [Human
herpesvirus 6]
Length = 305
Score = 111 bits (277), Expect = 5e-23
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 24/235 (10%)
Query: 109 LAPELVRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLK 168
+ P L R + ++F + + Q Y L +F+ L+R F Q+ F++DF + +K
Sbjct: 81 ILPSLTRKLQEMKFLPASDKSFESQ---YTEFLESFKILYREPLFLQIDGFIKDFRKWIK 137
Query: 169 TSFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQV 228
F G +K LE FQK IL+H +F+A L A +V
Sbjct: 138 GEFNEF------GDTRKIQ-------------LEPFQKNILIHVIFFIAVTKLPALANRV 178
Query: 229 NTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTA 288
+L VF+I +++ + +Q+ VFLVPRRHGKTWF+VP+I+ L + GI IGY A
Sbjct: 179 INYLTHVFDIEFVNESTLNTLKQKTNVFLVPRRHGKTWFIVPIISFLLKNIEGISIGYVA 238
Query: 289 HIRKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTN 343
H + + V E++ R F + + + + +ST +FAS +NT+
Sbjct: 239 HQKHVSHFVMKEVEFKCRRMFPEKTITCL--DNVITIDHQNIKSTALFASCYNTH 291
>gi|9628368|ref|NP_042959.1| DNA pacakaging protein [Human
herpesvirus 6]
gi|854045|emb|CAA58358.1| U66, late spliced gene (U60 /66) [Human
herpesvirus 6]
Length = 305
Score = 108 bits (270), Expect = 4e-22
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 24/235 (10%)
Query: 109 LAPELVRAVARLRFRECAPEDAVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLK 168
+ P L + ++F + + Q Y L +F+ L+R F Q+ F++DF + +K
Sbjct: 81 ILPSLSHKLQEMKFLPASDKSFESQ---YTEFLESFKILYREPLFLQIDGFIKDFRKWIK 137
Query: 169 TSFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLGDHAEQV 228
F G +K LE FQK IL+H +F+A L A +V
Sbjct: 138 GEFN------DFGDTRKIQ-------------LEPFQKNILIHVIFFIAVTKLPALANRV 178
Query: 229 NTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTA 288
+L VF+I +++ + +Q+ VFLVPRRHGKTWF+VP+I+ L + GI IGY A
Sbjct: 179 INYLTHVFDIEFVNESTLNTLKQKTNVFLVPRRHGKTWFIVPIISFLLKNIEGISIGYVA 238
Query: 289 HIRKATEPVFDEIDACLRGWFGSSRVDHVKGETISFSFPDGSRSTIVFASSHNTN 343
H + + V E++ R F + + + + +ST +FAS +NT+
Sbjct: 239 HQKHVSHFVMKEVEFKCRRMFPEKTITCL--DNVITIDHQNIKSTALFASCYNTH 291
>gi|18027276|gb|AAL55727.1|AF275656_1 terminase [Badger herpesvirus]
Length = 150
Score = 99.8 bits (247), Expect = 2e-19
Identities = 53/150 (35%), Positives = 93/150 (61%), Gaps = 3/150 (2%)
Query: 362 RPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRV 421
+ D++ +I+GF+ Q + K+IF+SS N+ +TSFLYNL+ A++++LNVV Y+C H
Sbjct: 1 KKDSLPSILGFMLQKDAKLIFISSVNSSDQTTSFLYNLKNASEKMLNVVNYVCAQHKEDF 60
Query: 422 VTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDD-RPVLTK 480
+ +C C+ L+ P +IT++ +++ T +LFL F E+IG A + ++ V+ +
Sbjct: 61 NLQDSIVSCPCFRLHIPSYITINESIKNTTNLFLDGVFATELIGDAASTSKNNVYRVVGE 120
Query: 481 SAGERFLLYRPSTTTNS--GLMAPELYVYV 508
S+ +F L R T T + ++ P LY+YV
Sbjct: 121 SSLTQFDLCRIDTCTPNIDRVLNPTLYIYV 150
>gi|18846000|ref|NP_572086.1| ORF 29a; packaging protein homolog;
EBV BGRF1 homolog [Human herpesvirus 8]
gi|1718286|gb|AAC57115.1| ORF 29a; packaging protein homolog; EBV
BGRF1 homolog [Human herpesvirus 8]
gi|2246541|gb|AAB62666.1| ORF 29a, encodes exon 1 of HSV UL15
homolog [Human herpesvirus 8]
Length = 312
Score = 99.0 bits (245), Expect = 3e-19
Identities = 78/302 (25%), Positives = 128/302 (41%), Gaps = 32/302 (10%)
Query: 48 FATATPKRHQTVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLRGRDFGGDHTAKLE 107
F PK + P +G +H +S + R + P D G ++
Sbjct: 32 FTRHCPKTARMAHPFIGVVHRINSYSSVLETYCTR--HHPATPTSANP-DVGTPRPSEDN 88
Query: 108 FLA-PELVRAVARLRFRECAPEDA----VPQRNAYYSVLNTFQALHRSEAFRQLVHFVRD 162
A P L+ +++ C EDA Q Y + T +LH +R+L F+ +
Sbjct: 89 VPAKPRLLESLSTYLQMRCVREDAHVSTADQLVEYQAARKTHDSLHACSVYRELQAFLVN 148
Query: 163 FAQLLKTSFRASSLAETTGPPKKRAKVDVATHGQTYGTLELFQKMILMHATYFLAAVLLG 222
+ L + LE FQ+ ++MH +FL ++
Sbjct: 149 LSSFLNGCYVPG-----------------------VHWLEPFQQQLVMHTFFFLVSIKAP 185
Query: 223 DHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGI 282
Q+ + F + ++ ++ F+Q+A+VFL+PRRHGKTW +V +I++ LAS I
Sbjct: 186 QKTHQLFGLFKQYFGLFETPNSVLQTFKQKASVFLIPRRHGKTWIVVAIISMLLASVENI 245
Query: 283 KIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVK-GETISFSFPDGSRSTIVFASSHN 341
IGY AH + VF EI L WF ++ K TI ++ P G S+++ A+ N
Sbjct: 246 NIGYVAHQKHVANSVFAEIIKTLCRWFPPKNLNIKKENGTIIYTRPGGRSSSLMCATCFN 305
Query: 342 TN 343
N
Sbjct: 306 KN 307
>gi|18071139|gb|AAL58192.1|AF236051_1 terminase [California sea lion
herpesvirus]
Length = 149
Score = 98.2 bits (243), Expect = 5e-19
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 2/149 (1%)
Query: 362 RPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRV 421
+ DA+ I+GF+ Q + K+IF+SS N+ +TSFL+ LR A + +L+VV+Y+C+ H
Sbjct: 1 KKDALPAILGFMLQKDAKVIFISSANSSDQATSFLFKLRNAGERMLSVVSYVCEQHRDDF 60
Query: 422 VTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKS 481
+C CY L+ P +IT++ V+ TA+LFL +F E++G +++++
Sbjct: 61 NLQDAVVSCPCYRLHIPSYITINENVKSTANLFLEGAFTTELMGDAGASQTAVHRIVSEA 120
Query: 482 AGERFLLYRPSTTTN--SGLMAPELYVYV 508
A +F L R TT + + LYVY+
Sbjct: 121 AVAQFDLCRVDTTKQEVAAQLDTTLYVYI 149
>gi|9631220|ref|NP_048006.1| orf 29A [Ateline herpesvirus 3]
gi|4019256|gb|AAC95554.1| orf 29A [Ateline herpesvirus 3]
Length = 318
Score = 96.3 bits (238), Expect = 2e-18
Identities = 49/145 (33%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Query: 201 LELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPR 260
+E FQ +++H YFL ++ + ++ + F + +++F+Q+A++FL+PR
Sbjct: 160 IEPFQLQLILHTFYFLISIKSPESTNKLFDIFKEYFGLGEMDSAMLQNFKQKASIFLIPR 219
Query: 261 RHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKGE 320
RHGKTW +V +I++ + S + +GY AH + VF EI L+ WF S +D VK E
Sbjct: 220 RHGKTWIVVAIISMLITSVENLHVGYVAHQKHVANSVFTEIINTLQKWFPSKNID-VKKE 278
Query: 321 --TISFSFPDGSRSTIVFASSHNTN 343
TI + P ST++ AS N N
Sbjct: 279 NGTIIYKIPGKKPSTLMCASCFNKN 303
>gi|18653840|ref|NP_570774.1| unknown [Macaca mulatta rhadinovirus]
gi|4494938|gb|AAD21360.1| unknown [Macaca mulatta rhadinovirus
17577]
gi|7330023|gb|AAF60012.1|AF210726_33 packaging protein [Macaca
mulatta rhadinovirus 26-95]
Length = 327
Score = 95.9 bits (237), Expect = 2e-18
Identities = 48/144 (33%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Query: 201 LELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPR 260
LE FQ+ ++MH YF+A++ + Q+ + F + +D ++ F+Q+A+VF++PR
Sbjct: 161 LEPFQQQLIMHTFYFIASIKAPEKTHQLFATFKQHFGLFETTDDVLQTFKQKASVFVIPR 220
Query: 261 RHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVK-G 319
RHGKTW +V +I++ L+S + +GY AH + VF E+ A L WF + ++ K
Sbjct: 221 RHGKTWIVVAIISVLLSSVENVHVGYVAHQKHVANAVFSEVIATLSRWFPAKNLNIKKEN 280
Query: 320 ETISFSFPDGSRSTIVFASSHNTN 343
TI ++ P S+++ A+ N N
Sbjct: 281 GTIVYASPGRRPSSLMCATCFNKN 304
>gi|28804699|dbj|BAC58102.1| DNA packaging protein [Cercopithecine
herpesvirus 1]
Length = 70
Score = 95.5 bits (236), Expect = 3e-18
Identities = 48/65 (73%), Positives = 53/65 (80%)
Query: 668 LQTDPVEYLSEQLNNLIETVSPNTDVRMYSGKRNGAADDLMVAVIMAIYLAAPTGIPPAF 727
LQTDPVEYL+ QLNNL E +SPN+D R YSGKRNGA+DDLMVAVIMA+YLAA AF
Sbjct: 1 LQTDPVEYLTAQLNNLTEILSPNSDARSYSGKRNGASDDLMVAVIMAVYLAATPHAHHAF 60
Query: 728 FPITR 732
PITR
Sbjct: 61 APITR 65
>gi|24943115|ref|NP_733877.1| ORF24 [Callitrichine herpesvirus 3]
gi|13676666|gb|AAK38232.1|AF319782_26 ORF24 [callitrichine
herpesvirus 3]
Length = 233
Score = 94.7 bits (234), Expect = 5e-18
Identities = 52/144 (36%), Positives = 85/144 (58%), Gaps = 1/144 (0%)
Query: 201 LELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPR 260
LE FQK +++H+ YFL ++ + A+ + + +F + S ++ F+Q+A+VFL+PR
Sbjct: 70 LEPFQKQVVLHSFYFLVSIKSVELADTMFNLFQDLFGLGGMSLANLKTFKQKASVFLIPR 129
Query: 261 RHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVD-HVKG 319
RHGKTW +V +I+L LAS ++IGY AH + VF EI L F + V+ + +
Sbjct: 130 RHGKTWIIVAIISLILASMSNVQIGYVAHQKHVAMAVFAEIIETLNRGFDTRCVEINKET 189
Query: 320 ETISFSFPDGSRSTIVFASSHNTN 343
TI+F P S+++ A+ N N
Sbjct: 190 STITFHHPGKQSSSVMCATCFNKN 213
>gi|9625637|ref|NP_039890.1| DNA packaging protein [Human
herpesvirus 4]
gi|74016|pir||QQBE38 BGRF1 protein - human herpesvirus 4 (strain
B95-8)
gi|1334893|emb|CAA24829.1| BGRF1 reading frame, homologous to RF 45
VZV and spliced HSV gene (Costa et al, 1985). Spliced to
BDRF1. Northern blots in BGRF1 detect 2.7, 2.6, 2.1kb
late and 1.9kb early RNAs. 2.6, 2.1kb RNAs very weak.
[Human herpesvirus 4]
Length = 325
Score = 91.3 bits (225), Expect = 6e-17
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 201 LELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPR 260
LE FQK +++H+ YFL ++ + + + + F + + + F+Q+A+VFL+PR
Sbjct: 169 LEAFQKQVVLHSFYFLISIKSLEITDTMFDIFQSAFGLEEMTLEKLHIFKQKASVFLIPR 228
Query: 261 RHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVD-HVKG 319
RHGKTW +V +I+L L++ ++IGY AH + VF EI L F S RV+ + +
Sbjct: 229 RHGKTWIVVAIISLILSNLSNVQIGYVAHQKHVASAVFTEIIDTLTKSFDSKRVEVNKET 288
Query: 320 ETISFSFPDGSRSTIVFASSHNTN 343
TI+F ST++ A+ N N
Sbjct: 289 STITFRHSGKISSTVMCATCFNKN 312
>gi|9628036|ref|NP_042630.1| ORF 29a; expression of ORF 29a and 29b
is likely as a spliced mRNA [Equine herpesvirus 2]
gi|1360790|pir||S55628 hypothetical protein 29a - equine
herpesvirus 2
gi|695206|gb|AAC13821.1| ORF 29a; expression of ORF 29a and 29b is
likely as a spliced mRNA
Length = 327
Score = 90.5 bits (223), Expect = 1e-16
Identities = 50/146 (34%), Positives = 82/146 (55%), Gaps = 3/146 (2%)
Query: 200 TLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVP 259
T+E FQK +++H YFL ++ A + + F + A++ F+Q++TV+L+P
Sbjct: 161 TIEPFQKQLILHTFYFLISIKAPHAANTLFEVFKEYFGLFDMGREALQTFKQKSTVYLIP 220
Query: 260 RRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVKG 319
RRHGKTW +V +I++ L S I +GY AH + VF EI + WF + V ++K
Sbjct: 221 RRHGKTWIVVAIISMLLTSVENIHVGYVAHQKHVANSVFAEIINTIYRWFPAKNV-YIKK 279
Query: 320 E--TISFSFPDGSRSTIVFASSHNTN 343
E TI ++ + ST++ A+ N N
Sbjct: 280 ENGTIMYTNENRRPSTLMCATCFNKN 305
>gi|9629608|ref|NP_044871.1| packaging protein [murid herpesvirus 4]
gi|2317978|gb|AAB66436.1| packaging protein [murid herpesvirus 4]
Length = 306
Score = 88.2 bits (217), Expect = 5e-16
Identities = 47/144 (32%), Positives = 78/144 (53%), Gaps = 1/144 (0%)
Query: 201 LELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDTAVRHFRQRATVFLVPR 260
LE FQK +++H+ F+A++ + ++ + + ++ F +T + F Q++ FL+PR
Sbjct: 159 LEPFQKQLILHSFMFVASIKCPETTTKLFDEFKFLLDMLYFDNTDLLTFLQKSPAFLIPR 218
Query: 261 RHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRGWFGSSRVDHVK-G 319
RHGKTW + +I++ L S + IGY AH + + VF EI L WF +D K
Sbjct: 219 RHGKTWIVTAIISMLLTSVDDLHIGYVAHQKHVSLAVFLEISNILLAWFPRKNIDIKKEN 278
Query: 320 ETISFSFPDGSRSTIVFASSHNTN 343
I +S P ST++ A+ N N
Sbjct: 279 GVILYSHPGKKSSTLMCATCFNKN 302
>gi|27451957|gb|AAO15024.1| putative DNA terminase [Asinine
herpesvirus 5]
Length = 127
Score = 87.0 bits (214), Expect = 1e-15
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 387 NTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGA 446
N+ +TSFLYNL+ A +++LNVV Y+C H + +C CY L+ P +IT+D
Sbjct: 1 NSSDQTTSFLYNLKNAREKMLNVVNYVCPQHREDFSLQESVVSCPCYRLHIPTYITIDEN 60
Query: 447 VRRTADLFLPDSFMQEIIGGQARETGDD-RPVLTKSAGERFLLYRPSTTTNSGL--MAPE 503
++ T +LF+ +F E++G A T + V+++ A E+F L R T + + P
Sbjct: 61 IKDTTNLFMEGAFTTELMGDGAAPTRTNMHKVVSEPALEQFDLCRADTGSEEARDNLDPV 120
Query: 504 LYVYVDP 510
LYVYVDP
Sbjct: 121 LYVYVDP 127
>gi|20270988|gb|AAM18492.1|AF495531_1 putative DNA terminase [Equine
herpesvirus 5]
Length = 127
Score = 87.0 bits (214), Expect = 1e-15
Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 387 NTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGA 446
N+ +TSFLYNL+ A +++LNVV Y+C H + +C CY L+ P +IT+D
Sbjct: 1 NSSDQTTSFLYNLKNAREKMLNVVNYVCPQHREDFSLQESVVSCPCYRLHIPTYITIDEN 60
Query: 447 VRRTADLFLPDSFMQEIIGGQARETGDD-RPVLTKSAGERFLLYRPSTTTNSGL--MAPE 503
++ T +LF+ +F E++G A T + V+++ A E+F L R T + + P
Sbjct: 61 IKDTTNLFMEGAFTTELMGDGAAPTRTNMHKVVSEPALEQFDLCRADTCSEEARDNLDPV 120
Query: 504 LYVYVDP 510
LYVY+DP
Sbjct: 121 LYVYIDP 127
>gi|27451961|gb|AAO15026.1| putative DNA terminase [Asinine
herpesvirus 4.1]
Length = 127
Score = 86.7 bits (213), Expect = 1e-15
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 387 NTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGA 446
N+ +TSFLYNL+ A +++LNVV Y+C H + +C CY L+ P +IT+D
Sbjct: 1 NSSDQTTSFLYNLKNAREKMLNVVNYVCPQHREDFSLQESVVSCPCYRLHIPTYITIDEN 60
Query: 447 VRRTADLFLPDSFMQEIIGGQARETGDD-RPVLTKSAGERFLLYRPSTTTNSGL--MAPE 503
++ T +LFL +F E++G A T + V+++SA +F L R T + + P
Sbjct: 61 IKDTTNLFLEGAFTTELMGDGAVPTKTNMHKVVSESAITQFDLCRADTGSEEARKNLNPT 120
Query: 504 LYVYVDP 510
LYVY+DP
Sbjct: 121 LYVYIDP 127
>gi|27451963|gb|AAO15027.1| putative DNA terminase [Asinine
herpesvirus 4.2]
Length = 127
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 387 NTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGA 446
N+ +TSFLYNL+ A +++LNVV Y+C H + +C CY L+ P +IT+D
Sbjct: 1 NSSDQTTSFLYNLKNAREKMLNVVNYVCPQHREDFSLQESVVSCPCYRLHIPTYITIDEN 60
Query: 447 VRRTADLFLPDSFMQEIIGGQARETGDD-RPVLTKSAGERFLLYRPSTTTNSGL--MAPE 503
++ T +LFL +F E++G A T + ++++SA +F L R T + + P
Sbjct: 61 IKDTTNLFLEGAFTTELMGDGAVPTKTNMHKMVSESAITQFDLCRADTGSEEARKNLNPT 120
Query: 504 LYVYVDP 510
LYVY+DP
Sbjct: 121 LYVYIDP 127
>gi|4580947|gb|AAD24548.1| terminase [Asian elephant endotheliolytic
herpesvirus]
Length = 124
Score = 83.2 bits (204), Expect = 2e-14
Identities = 45/124 (36%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 387 NTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGA 446
NT STSFL +++ ++LNV++Y+C++H+ + A C CY L+KP FI+++
Sbjct: 2 NTSTQSTSFLAHVKKTPTQILNVISYVCEEHLYSFGERSEAITCPCYRLHKPTFISLNLN 61
Query: 447 VRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTN--SGLMAPEL 504
+++TA+ FL DSF +EI+ G + P+LT S+ F + R ST +A L
Sbjct: 62 IKKTANAFLKDSFNEEIL-GTTNTSFLANPILTDSSVNEFDMIRYSTVNKQLQEHLADTL 120
Query: 505 YVYV 508
+VYV
Sbjct: 121 FVYV 124
>gi|6224668|gb|AAF05897.1|AF091070_1 terminase [callitrichine
herpesvirus 1]
Length = 126
Score = 83.2 bits (204), Expect = 2e-14
Identities = 47/125 (37%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 387 NTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGA 446
N+G STSFL NL+ A + LLNVV Y+C++H + +C CY L P FIT++
Sbjct: 2 NSGDQSTSFLLNLKNAKERLLNVVNYVCNEHREEFELQDSMVSCPCYRLYIPTFITINET 61
Query: 447 VRRTADLFLPDSFMQEIIGGQARETGDDRP-VLTKSAGERFLLYRPSTTTNS--GLMAPE 503
++ T +LFL +F E++G P V+ SA +F L R T T + P
Sbjct: 62 IKTTTNLFLEGAFTTELMGDTGSINNGPAPRVINISAQTQFDLCRTDTLTQEFCSNVEPI 121
Query: 504 LYVYV 508
LYVY+
Sbjct: 122 LYVYI 126
>gi|1066188|emb|CAA62041.1| putative DNA packaging protein [Canine
herpesvirus]
Length = 92
Score = 82.8 bits (203), Expect = 2e-14
Identities = 43/91 (47%), Positives = 62/91 (67%), Gaps = 4/91 (4%)
Query: 1 MFGQQLASDVQQYLERLEKQRQQ--KVGVDEASAGLTLGGDALRVPFLDFATATPKRHQT 58
MFG+ L+ + ++Y E L++ RQ K D + +T D +RVPFL+FA +TP+RHQT
Sbjct: 1 MFGKILSDETEKYFESLKRDRQNYNKSNYDTETP-VTNSNDDIRVPFLNFAISTPQRHQT 59
Query: 59 VV-PGVGTLHDCCEHSPLFSAVARRLLFNSL 88
P VG LH+CCE SP+FS+++R+LLF L
Sbjct: 60 NEWPAVGALHNCCESSPIFSSISRQLLFTGL 90
>gi|27451959|gb|AAO15025.1| putative DNA terminase [Asinine
herpesvirus 6]
Length = 127
Score = 82.0 bits (201), Expect = 4e-14
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 387 NTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGA 446
N+ +TS LYNL+ A +++LNVV Y+C H + +C CY L+ P +IT+D
Sbjct: 1 NSSDQTTSLLYNLKNAREKMLNVVNYVCPQHREDFSLQESVVSCPCYRLHIPTYITIDEN 60
Query: 447 VRRTADLFLPDSFMQEIIGGQARETGDD-RPVLTKSAGERFLLYRPSTTTNSGLMAPE-- 503
++ T +LF+ +F E++G A T + V+++ A E+F L R T + E
Sbjct: 61 IKDTTNLFMEGAFTTELMGDGAAPTRTNMHKVVSEPALEQFDLCRTDTGCEEARDSLEHT 120
Query: 504 LYVYVDP 510
LYVYVDP
Sbjct: 121 LYVYVDP 127
>gi|6224666|gb|AAF05896.1|AF091069_1 terminase [Leporid herpesvirus
2]
Length = 124
Score = 80.9 bits (198), Expect = 8e-14
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 387 NTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGA 446
N+G +TSFLYNLR A ++LLNVV Y+C H V T+C CY L P++IT++
Sbjct: 2 NSGDKTTSFLYNLRDAQEKLLNVVNYVCPTHREDFVKQDTITSCPCYRLYVPIYITINET 61
Query: 447 VRRTADLFLPDSFMQEIIG 465
++ T +LFL D+F E++G
Sbjct: 62 IKATTNLFLKDAFTTELMG 80
>gi|13517558|gb|AAK28848.1|AF327835_1 terminase [Ovine herpesvirus
2]
Length = 122
Score = 80.9 bits (198), Expect = 8e-14
Identities = 40/110 (36%), Positives = 63/110 (56%)
Query: 386 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 445
+N+ STSFLYNL+ A++ LLNVV Y+C DH +C CY L+ P +I++D
Sbjct: 1 SNSSDQSTSFLYNLKSASERLLNVVNYVCTDHKEDFSMQEGLISCPCYSLHVPSYISIDT 60
Query: 446 AVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTT 495
++ T +LFL F E++G + V++++A +F L R TT+
Sbjct: 61 QIKNTTNLFLDGVFSTELMGDSNHHSQSAFQVVSEAAISQFELCRVDTTS 110
>gi|6224652|gb|AAF05889.1|AF091062_1 terminase [callitrichine
herpesvirus 3]
gi|6224654|gb|AAF05890.1|AF091063_1 terminase [callitrichine
herpesvirus 3]
gi|6224656|gb|AAF05891.1|AF091064_1 terminase [callitrichine
herpesvirus 3]
gi|6224658|gb|AAF05892.1|AF091065_1 terminase [callitrichine
herpesvirus 3]
gi|6224660|gb|AAF05893.1|AF091066_1 terminase [callitrichine
herpesvirus 3]
gi|6224662|gb|AAF05894.1|AF091067_1 terminase [callitrichine
herpesvirus 3]
Length = 126
Score = 79.3 bits (194), Expect = 2e-13
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 386 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 445
TN+ +TSFLY L+ A + LLNVV+Y+CDDH + AC C+ L P +IT+D
Sbjct: 1 TNSSDQATSFLYRLKDAHERLLNVVSYVCDDHREEFDMQDSMVACPCFRLRIPCYITLDI 60
Query: 446 AVRRTADLFLPDSFMQEIIGG--QARETGDDRPVLTKSAGERFLLYRPSTTTNSGL--MA 501
+R T +LFL +F E++G E G R ++ + A + L R +T S + +
Sbjct: 61 NIRTTTNLFLEGAFSTELMGDATSIAEQGLSR-IIGEEALSQLELCRVNTLEKSVVDRLG 119
Query: 502 PELYVYV 508
LYVY+
Sbjct: 120 STLYVYI 126
>gi|6224664|gb|AAF05895.1|AF091068_1 terminase [Bovine herpesvirus
4]
Length = 126
Score = 79.3 bits (194), Expect = 2e-13
Identities = 46/125 (36%), Positives = 69/125 (54%), Gaps = 3/125 (2%)
Query: 387 NTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGA 446
N+ STSFL+NLR A +++LNVV Y+C +H + T+C CY L+ P +IT+D +
Sbjct: 2 NSADKSTSFLFNLRNAKEKMLNVVNYVCPEHKEDFNLQSTLTSCPCYRLHIPTYITIDES 61
Query: 447 VRRTADLFLPDSFMQEIIGG-QARETGDDRPVLTKSAGERFLLYRPSTT--TNSGLMAPE 503
++ T +LFL D F E++G T V+ + A F + R TT ++
Sbjct: 62 IKNTTNLFLDDVFTTELMGDISTFPTSSMFKVVEEQALFHFDICRVDTTQIDTVKIIDNV 121
Query: 504 LYVYV 508
LYVYV
Sbjct: 122 LYVYV 126
>gi|13517556|gb|AAK28847.1|AF327834_1 terminase [Caprine herpesvirus
2]
Length = 122
Score = 78.6 bits (192), Expect = 4e-13
Identities = 39/110 (35%), Positives = 61/110 (55%)
Query: 386 TNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDG 445
+N+ STSFLYNL+ A++ LLNVV Y+C DH +C CY L+ P +I++D
Sbjct: 1 SNSSDQSTSFLYNLKSASERLLNVVNYVCTDHKEDFSMQEGLVSCPCYSLHVPSYISIDT 60
Query: 446 AVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTT 495
++ T +LFL F E++G V++++A +F L R T +
Sbjct: 61 QIKNTTNLFLDGVFSTELMGDSNHHAQSVFQVVSEAAISQFELCRVDTAS 110
>gi|16580159|gb|AAL17627.1| DNA packaging protein [deer malignant
catarrhal fever virus]
Length = 123
Score = 77.4 bits (189), Expect = 9e-13
Identities = 39/104 (37%), Positives = 60/104 (57%)
Query: 392 STSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTA 451
STSFLYNL+ A++ LLNVV Y+C DH +C CY L+ P +I++D ++ T
Sbjct: 5 STSFLYNLKSASERLLNVVNYVCTDHKEDFSMQEGLISCPCYSLHVPSYISIDTQIKNTT 64
Query: 452 DLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTT 495
+LFL F E++G + V++++A +F L R TT+
Sbjct: 65 NLFLDGVFSTELMGDSNHHSLSAFQVVSEAAISQFELCRLDTTS 108
>gi|6224632|gb|AAF05879.1|AF091052_1 terminase [Cercopithecine
herpesvirus 12]
Length = 126
Score = 76.6 bits (187), Expect = 1e-12
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 387 NTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGA 446
N+ +TSFLY L+ A + LLNVV+Y+C +H + +C C+ L+ P +ITMD
Sbjct: 2 NSADQATSFLYKLKDAQERLLNVVSYVCQEHRQDFDMQDSMVSCPCFRLHIPSYITMDSN 61
Query: 447 VRRTADLFLPDSFMQEIIGG-QARETGDDRPVLTKSAGERFLLYRPSTTTN--SGLMAPE 503
+R T +LFL +F E++G + G ++ A + L R T +G +A
Sbjct: 62 IRSTTNLFLDGAFSTELMGDTSSLSHGSLSRIVRDDALNQLELCRVDTLNPKVAGRLASS 121
Query: 504 LYVYV 508
LYVYV
Sbjct: 122 LYVYV 126
>gi|6224636|gb|AAF05881.1|AF091054_1 terminase [Cercopithecine
herpesvirus 15]
Length = 126
Score = 75.5 bits (184), Expect = 3e-12
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Query: 387 NTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGA 446
N+ +TSFLY L+ A + LLNVV+Y+C +H + +C C+ L+ P +ITMD
Sbjct: 2 NSADQATSFLYKLKDAQERLLNVVSYVCQEHRQDFDMQDSMVSCPCFRLHIPSYITMDSN 61
Query: 447 VRRTADLFLPDSFMQEIIGG-QARETGDDRPVLTKSAGERFLLYRPSTTTN--SGLMAPE 503
+R T +LFL +F E++G + G + A + L R T +G +A
Sbjct: 62 IRATTNLFLDGAFSTELMGDTSSLSHGSLSRTVRDDALNQLELCRVDTLNPQVAGRLASS 121
Query: 504 LYVYV 508
LYVYV
Sbjct: 122 LYVYV 126
>gi|13786050|gb|AAK39548.1|AF354746_1 terminase [Asian elephant
endotheliolytic herpesvirus]
Length = 112
Score = 75.1 bits (183), Expect = 4e-12
Identities = 37/101 (36%), Positives = 63/101 (61%), Gaps = 1/101 (0%)
Query: 393 TSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTAD 452
TSFL +++ ++LNV++Y+C++H+ + A C CY L+KP FI+++ +++TA+
Sbjct: 1 TSFLAHVKKTPTQILNVISYVCEEHLYSFGERSEAITCPCYRLHKPTFISLNLNIKKTAN 60
Query: 453 LFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPST 493
FL DSF +EI+ G + P+LT S+ F + R ST
Sbjct: 61 AFLKDSFNEEIL-GTTNTSFLANPILTDSSVNEFDMIRYST 100
>gi|6319160|gb|AAF07189.1|AF193618_1 terminase [California sea lion
herpesvirus]
Length = 125
Score = 74.3 bits (181), Expect = 7e-12
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 387 NTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGA 446
N+ +TSFL+ LR A + +L+VV+Y+C+ H +C CY L+ P +IT++
Sbjct: 2 NSSDQATSFLFKLRNAGERMLSVVSYVCEQHRDDFNLQDAVVSCPCYRLHIPSYITINEN 61
Query: 447 VRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTN--SGLMAPEL 504
V+ TA+LFL +F E++G +++++A +F L R TT + + L
Sbjct: 62 VKSTANLFLEGAFTTELMGDAGASQTAVHRIVSEAAVAQFDLCRVDTTKQEVAAQLDTTL 121
Query: 505 YVYV 508
YVY+
Sbjct: 122 YVYI 125
>gi|16923248|gb|AAL29892.1| DNA packaging protein [American bison
gammaherpesvirus]
Length = 128
Score = 73.2 bits (178), Expect = 2e-11
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Query: 385 STNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMD 444
S+N+ STSFLY L+ A +++LN+V+Y+C++H +C CY L P +IT+D
Sbjct: 1 SSNSSDQSTSFLYKLKNAHEKMLNIVSYVCNEHKEEFSLQEGLVSCPCYSLYIPSYITID 60
Query: 445 GAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPST--TTNSGLMAP 502
++ T +LFL F E++G V+++++ +F L R T T +
Sbjct: 61 EHIKNTTNLFLDGVFDTELMGEVQSGKLSAFQVVSEASISQFELCRLDTNSTEVEQRLHS 120
Query: 503 ELYVYVDP 510
++Y+DP
Sbjct: 121 TAHMYIDP 128
>gi|9626884|ref|NP_041153.1| terminase [Ictalurid herpesvirus 1]
gi|139649|sp|Q00140|VTER_HSVI1 PROBABLE DNA PACKAGING PROTEIN
(TERMINASE)
gi|74074|pir||JVBEIV DNA-packaging protein - ictalurid herpesvirus
1 (strain auburn 1)
gi|331210|gb|AAA88166.1| terminase
Length = 852
Score = 67.4 bits (163), Expect = 9e-10
Identities = 79/330 (23%), Positives = 143/330 (42%), Gaps = 33/330 (10%)
Query: 254 TVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFDEIDACLRG-----W 308
T+ L PR+ GKT +V L+A ++ S+ I+I A + E ++D ++ L W
Sbjct: 304 TLALAPRQCGKTTIMVILLA-AMISYLDIEIVVQAQHKTMCETLYDRVELVLHEIQHSPW 362
Query: 309 FGS-SRVDHVKGETISFSF---PDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPD 364
+ +R+ +KG T + F P +T V S + N RGQ + + +DEA F+ P
Sbjct: 363 YPEENRIVTIKGTTETREFIYDPAYKGTTRVHFLSSSPNAARGQIPDFVLIDEAAFVNPA 422
Query: 365 AVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGA-ADELLNVVT--YICDDHMPRV 421
++ +++ L N K I +SS + K+ + + + G+ +V+ + CD H
Sbjct: 423 SLLSLLPLLAVKNRKQIHISS-HIAKSWVTRVETIMGSDGKRAFHVINQRFKCDGH---- 477
Query: 422 VTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKS 481
H C C + P I ++ +++ + P E+ GG R V T
Sbjct: 478 -AHLPGMMCPCSAVFCPTHIDLNESIQELINNITPGGCELELTGGDGAGV-LKRDVATPF 535
Query: 482 AGERFLLYRPSTTTN-SGLMAPELYVYVDPAFTANTRASGTGIAVVGRYRDD-FIIFALE 539
+ E + + + SG+ +++ VDP + AN S G+ + F++ ALE
Sbjct: 536 SEELVRQFMTNAVPDLSGV--KRVFIAVDPTY-ANGTQSSFGVCTFAELNNGMFLVVALE 592
Query: 540 HFFLRALTGSAPADIARCVVHSLAQVLALH 569
A ++ ++H VL H
Sbjct: 593 EV--------AIGEMRSILMHFYTTVLMAH 614
>gi|13786048|gb|AAK39547.1|AF354745_1 terminase [Asian elephant
endotheliolytic herpesvirus]
Length = 93
Score = 67.0 bits (162), Expect = 1e-09
Identities = 33/87 (37%), Positives = 54/87 (61%), Gaps = 1/87 (1%)
Query: 407 LNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGG 466
LNV++Y+C++H+ + A C CY L+KP FI+++ +++TA+ FL DSF +EI+ G
Sbjct: 1 LNVISYVCEEHLYSFGERSEAITCPCYRLHKPTFISLNLNIKKTANAFLKDSFNEEIL-G 59
Query: 467 QARETGDDRPVLTKSAGERFLLYRPST 493
+ P+LT S+ F + R ST
Sbjct: 60 TTNTSFLANPILTDSSVNEFDMIRYST 86
>gi|237259|gb|AAB20055.1| UL15 [human herpesvirus 1]
Length = 28
Score = 60.8 bits (146), Expect = 8e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Query: 327 PDGSRSTIVFASSHNTNGIRGQDFNLLF 354
PDGSRSTIVFASSHNTNGIRGQDFNLLF
Sbjct: 1 PDGSRSTIVFASSHNTNGIRGQDFNLLF 28
>gi|10946345|gb|AAG24867.1|AF300864_1 terminase [Asian elephant
endotheliolytic herpesvirus]
gi|10946347|gb|AAG24868.1|AF300865_1 terminase [Asian elephant
endotheliolytic herpesvirus]
gi|10946349|gb|AAG24869.1|AF300866_1 terminase [Asian elephant
endotheliolytic herpesvirus]
gi|10946351|gb|AAG24870.1|AF300867_1 terminase [Asian elephant
endotheliolytic herpesvirus]
gi|10946353|gb|AAG24871.1|AF300868_1 terminase [Asian elephant
endotheliolytic herpesvirus]
gi|10946355|gb|AAG24872.1|AF300869_1 terminase [Asian elephant
endotheliolytic herpesvirus]
gi|13786052|gb|AAK39549.1|AF354747_1 terminase [Asian elephant
endotheliolytic herpesvirus]
Length = 79
Score = 50.8 bits (120), Expect = 9e-05
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 425 TNATACSCYILNKPVFITMDGAVRRTADLFLPDSFMQEIIGGQARETGDDRPVLTKSAGE 484
+ A C CY L+KP FI+++ +++TA+ FL DSF +EI+ G + P+LT S+
Sbjct: 5 SEAITCPCYRLHKPTFISLNLNIKKTANAFLKDSFNEEIL-GTTNTSFLANPILTDSSVN 63
Query: 485 RFLLYRPST 493
F + R ST
Sbjct: 64 EFDMIRYST 72
Database: nr
Posted date: Aug 27, 2003 10:37 AM
Number of letters in database: 485,782,529
Number of sequences in database: 1,508,275
Lambda K H
0.324 0.138 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 680,274,830
Number of Sequences: 1508275
Number of extensions: 28347305
Number of successful extensions: 78581
Number of sequences better than 1.0e-03: 103
Number of HSP's better than 0.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 78191
Number of HSP's gapped (non-prelim): 115
length of query: 734
length of database: 485,782,529
effective HSP length: 131
effective length of query: 603
effective length of database: 288,198,504
effective search space: 173783697912
effective search space used: 173783697912
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 111 (47.4 bits)