NCBI GenBank

Mouse To Human Homology Region Map, Chromosome 3

How to use this Resource

Cross Mouse Locus Mouse Gene Human Chr. Human Gene In Situ Method RH Map Genethon Map Homology Group
c 6.6 Il7 8 IL7 8q12-q13 88
8.0 Crh 8 CRH 8q13 G 88
10.5 Car1 8 CA1 8q13-q22 R SGC31642 97-101 88
10.5 Car2 8 CA2 8q13-q22 R,G SHGC-10992 95-107 88
a, b 11.7 Car3 8 CA3 8q13-q22 R,G WI-16407 97-101 88
13.8 Pkcl 3 PKCL 3 R WI-8859 186-188 34
13.2 Cpa3 3 CPA3 3q21-q25 R SHGC-14841 164-186 34
a, b 14.4 Evi1 3 EVI1 3q24-q28 P 34
b 14.4 Glut2 3 SLC2A2 3q26 G,P 34
b 14.4 Fim3 3 FIM3 3q27 34
a, b 19.2 Ccna 4 CCNA 4q25-q31 R,G A006S14 123-125 40
a, b 19.2 Il2 4 IL-2 4q26-q27 R,G* WI-7035 125-127 40
a, b 19.9 Fgf2 4 FGF2 4q25-q27 R WI-6076 143-153 40
20.0 Anx5 4 ANX5 4q26-q28 40
a 29.6 W65555(a) 3* 20990(u) 3 R Cda0ae10 69-171 33
a 29.6 Mme 3* MME 3q21-q27 33
c 31.9 Si-s 3* SI 3q25-26 R X63597 178-179 33
33.8 Ptx3 3* PTX3 3q25 R WI-7070 176-179 33
33.6(g) Gria2 4* GRIA2 4q32-q33 42
a 39.1 Glrb 4* GLRB 4q32 R U33267 157-170 42
b 41.3 Fgg 4* FGG 4q28 R,G* stSG1439 143-153 42
a 41.7 Gba 1 GBA 1q21 P 4
b 42.1 Il6r 1 IL6R 1q21 4
b 42.1 Lor 1 Lor 1q21 R,C,P M61120 159-164 4
a 42.6 Thbs3 1 THBS3 1q21-q23 P 4
a, c 42.6 Bglap1 1 BGLAP 1q 4
a 42.6 Fpsl-rs1 1 FPSL 1q24-q31 4
b 42.6 Flg 1 FLG 1q21 R,C,P WI-7217 160-164 4
a 43.6 Mcl1 1 MCL1 1q21 R SGC34987 156-160 4
a 43.6 Cacy(g) 1 S100A6 1q21-q25 C,P 4
43.6 Capl(g) 1 S100A4 1q21-q22 R,C,P M81457 159-164 4
b 45.2 Hist2 1 H3F2 1q12-21 C,P 4
45.3 Hsd3b 1 HSDB3 1p11-13 R SGC35274 156-160 4
b 45.6 Gja5 1 GJA5 1p36-q12 4
a 44.8(g) Muc1 1 MUC1 1q21-q23 P,G 4
a 46.0 Pklr 1 PKLR 1q21 4
a, b 46.0 Ntrk1 1 NTRK1 1q23-31 4
a, P 46(y) Cd1 1 CD1 1q22-23 R, P SHGC-10708 159-170 4
a 46.5(y) Fcgr1(g) 1 FCGR1 1q 4
48.0 Arnt 1 ARNT 1pter-q12 R stSG98 156-160 4
a, P 47.8(y) Cd2 1 CD2 1p13 R D1S3476 156-160 4
a, P 48.4 Atpla1 1 ATP1A1 1p13 R,P A001Z44 154-156 4
a, P 48.5 Ampd1 1 AMPD1 1p13 4
a, b, P 48.5 Ngfb 1 NGFB 1p13 R,P,G SHGC-10159 153 4
a, b, P 48.5 Nras 1 NRAS 1p13 P,G 4
a, b, P 48.5 Tshb 1 TSHB 1p13 P,G 4
a,b 48.5 Rap1a 1 RAP1A 1p13-p12 R,P SHGC-141 146-151 4
a,b 48.5 Cd53 1 CD53 1p13-p12 R SHGC-12404 146-151 4
b 48,8 Csfm 1 CSF1 1p13-21 R WI-9116 146-149 4
b 48.8 Gnai3 1 GNAI3 1p13 R WI-9136 146-149 4
b 49.0 Gnat2 1 GNAT2 1p13 4
b 49(y) Kcna3 1 KCNA3 1p13.3 R SHGC-9869 146-151 4
49(y) Kcnc4 1 KCNC4 1p21 4
50(y) Ampd2 1 AMPD2 1 R A006D12 146-147 4
50.0 Amy1 1 AMY1 1p21 R SGC32938 140-143 4
a, b 50.0 Amy2 1 AMY2B 1p21 G 4
50.0 Cf3 1 F3 1p22-p21 G 4
b 50.8 Vcam1 1 VCAM1 1p31 4
53.1 Col11a1 1 COL11A 1 R UTR-9667 140-143 4
b 56.6 Pxmp1 1 PXMP1 1p22-p21 4
55(g) Fabpi 4 FABP2 4q28-q31 G,R SGC35615 120-123 39
62.5 Ank2 4 ANK2 4q25-q27 R SHGC-11962 115-119 39
a, b 65.2 Egf 4 EGF 4q25 G,R SHGC-10709 115-119 39
68.9 Nfkb1 4 NFKB1 4q25 R WI-7764 106-113 39
61.6 Lef1 4 LEF1 4q23-q25 39
S Adh5 4 ADH5 4q21-q25 39
71.2 Adh3 4 ADH3 4q21-q23 R,G WI-14387 99-105 39
71.2 Adh1 4 ADH1 4q21-q23 39
a 75.8 Ptgfr 1* PTGFR 1p31.1 R SHGC-12571 106-110 2
78.1 Rpe65 1* RPE65 1p31 2
a 82.0 Ptgerep3 1* PTGER3 1p31.2 R SHGC-12893 100-106 2

Human/Mouse Homology Mapping Methods

MethodDescription
CHigh-resolution cytogenetic methods
GGenetic linkage mapping
G*Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
LLong-range restriction site mapping
PMultiple physical methods, including YAC and cosmid contigs
RRadiation hybrid mapping
XMultiple sources of high-resolution data

Gene Notes:

KeyDescription
aGene Bank Accession Number for Mouse EST
bGene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
gMouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
yPosition has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
pDifferent sources of high resolution mapping data give conflicting positions
rDifference between position in inbred mice vs. Mus spretus
uThis is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map
Human Chr. Human Chr. Human Chr. Human Chr. Human Chr. Human Chr.
1 2 3 4 5 6
7 8 9 10 11 12
13 14 15 16 17 18
19 X

The asterisk character ('*') is used to indicate a different region of homology on the same human chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.