BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= PG0932
(396 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34540786|ref|NP_905265.1| N-acetylmuramoyl-L-alanine ami... 738 0.0
gi|154491706|ref|ZP_02031332.1| hypothetical protein PARMER... 311 6e-83
gi|150010523|ref|YP_001305266.1| conserved hypothetical pro... 286 1e-75
gi|153808750|ref|ZP_01961418.1| hypothetical protein BACCAC... 280 1e-73
gi|156109557|gb|EDO11302.1| hypothetical protein BACOVA_032... 276 1e-72
gi|156861320|gb|EDO54751.1| hypothetical protein BACUNI_017... 270 9e-71
gi|29347551|ref|NP_811054.1| putative N-acetylmuramoyl-L-al... 269 2e-70
gi|53715107|ref|YP_101099.1| putative N-acetylmuramoyl-L-al... 267 7e-70
gi|150006672|ref|YP_001301416.1| putative N-acetylmuramoyl-... 267 8e-70
gi|86132286|ref|ZP_01050881.1| putative N-acetylmuramoyl-L-... 221 5e-56
gi|149372818|ref|ZP_01891839.1| putative exported N-acetylm... 216 3e-54
gi|89890701|ref|ZP_01202210.1| N-acetylmuramoyl-L-alanine a... 212 4e-53
gi|146302312|ref|YP_001196903.1| cell wall hydrolase/autoly... 210 1e-52
gi|126648188|ref|ZP_01720682.1| putative exported N-acetylm... 208 5e-52
gi|91214838|ref|ZP_01251811.1| putative N-acetylmuramoyl-L-... 207 7e-52
gi|126663651|ref|ZP_01734647.1| putative N-acetylmuramoyl-L... 207 1e-51
gi|110637170|ref|YP_677377.1| N-acetylmuramoyl-L-alanine am... 206 2e-51
gi|86133694|ref|ZP_01052276.1| putative exported N-acetylmu... 204 7e-51
gi|150024845|ref|YP_001295671.1| Probable N-acetylmuramoyl-... 204 1e-50
gi|120435993|ref|YP_861679.1| N-acetylmuramoyl-L-alanine am... 204 1e-50
gi|126663650|ref|ZP_01734646.1| putative exported N-acetylm... 203 1e-50
gi|83857339|ref|ZP_00950867.1| putative exported N-acetylmu... 203 2e-50
gi|124006547|ref|ZP_01691380.1| N-acetylmuramoyl-L-alanine ... 201 1e-49
gi|88712941|ref|ZP_01107026.1| putative exported N-acetylmu... 197 7e-49
gi|88805310|ref|ZP_01120829.1| putative N-acetylmuramoyl-L-... 196 2e-48
gi|88803694|ref|ZP_01119218.1| putative exported N-acetylmu... 193 2e-47
gi|110637572|ref|YP_677779.1| N-acetylmuramoyl-L-alanine am... 192 4e-47
gi|149276257|ref|ZP_01882401.1| putative exported N-acetylm... 190 2e-46
gi|86141376|ref|ZP_01059922.1| putative exported N-acetylmu... 184 8e-45
gi|149276256|ref|ZP_01882400.1| N-acetylmuramoyl-L-alanine ... 172 3e-41
gi|119355960|ref|YP_910604.1| N-acetylmuramoyl-L-alanine am... 169 4e-40
gi|67917998|ref|ZP_00511600.1| N-acetylmuramoyl-L-alanine a... 166 3e-39
gi|78188060|ref|YP_378398.1| Cell wall hydrolase/autolysin ... 164 1e-38
gi|67937946|ref|ZP_00530476.1| N-acetylmuramoyl-L-alanine a... 161 5e-38
gi|68552773|ref|ZP_00592159.1| N-acetylmuramoyl-L-alanine a... 160 2e-37
gi|21672895|ref|NP_660960.1| N-acetylmuramoyl-L-alanine ami... 160 2e-37
gi|110597309|ref|ZP_01385597.1| N-acetylmuramoyl-L-alanine ... 157 1e-36
gi|68549352|ref|ZP_00588817.1| N-acetylmuramoyl-L-alanine a... 153 2e-35
gi|78187914|ref|YP_375957.1| N-acetylmuramoyl-L-alanine ami... 152 3e-35
gi|83815697|ref|YP_446595.1| N-acetylmuramoyl-L-alanine ami... 151 6e-35
gi|145220516|ref|YP_001131225.1| N-acetylmuramoyl-L-alanine... 144 8e-33
gi|95929134|ref|ZP_01311878.1| N-acetylmuramoyl-L-alanine a... 136 2e-30
gi|116623674|ref|YP_825830.1| N-acetylmuramoyl-L-alanine am... 135 4e-30
gi|78356417|ref|YP_387866.1| N-acetylmuramoyl-L-alanine ami... 132 3e-29
gi|120601940|ref|YP_966340.1| N-acetylmuramoyl-L-alanine am... 128 7e-28
gi|46580776|ref|YP_011584.1| N-acetylmuramoyl-L-alanine ami... 128 7e-28
gi|78222637|ref|YP_384384.1| Cell wall hydrolase/autolysin ... 124 8e-27
gi|121540647|ref|ZP_01672407.1| N-acetylmuramoyl-L-alanine ... 123 2e-26
gi|108757251|ref|YP_632066.1| N-acetylmuramoyl-L-alanine am... 123 2e-26
gi|77919112|ref|YP_356927.1| N-acetylmuramoyl-L-alanine ami... 122 4e-26
gi|94968182|ref|YP_590230.1| N-acetylmuramoyl-L-alanine ami... 122 5e-26
gi|115380232|ref|ZP_01467253.1| hypothetical protein STIAU_... 122 6e-26
gi|118474687|ref|YP_892367.1| N-acetylmuramoyl-L-alanine am... 121 1e-25
gi|114319731|ref|YP_741414.1| N-acetylmuramoyl-L-alanine am... 121 1e-25
gi|39996920|ref|NP_952871.1| N-acetylmuramoyl-L-alanine ami... 120 2e-25
gi|15792593|ref|NP_282416.1| putative N-acetylmuramoyl-L-al... 120 2e-25
gi|57238141|ref|YP_179391.1| N-acetylmuramoyl-L-alanine ami... 120 2e-25
gi|86150577|ref|ZP_01068800.1| N-acetylmuramoyl-L-alanine a... 120 2e-25
gi|86152511|ref|ZP_01070716.1| N-acetylmuramoyl-L-alanine a... 120 2e-25
gi|153951049|ref|YP_001397641.1| N-acetylmuramoyl-L-alanine... 120 2e-25
gi|86158119|ref|YP_464904.1| N-acetylmuramoyl-L-alanine ami... 120 2e-25
gi|50122857|ref|YP_052024.1| N-acetylmuramoyl-L-alanine ami... 119 2e-25
gi|121612331|ref|YP_001000945.1| N-acetylmuramoyl-L-alanine... 119 2e-25
gi|86150849|ref|ZP_01069065.1| N-acetylmuramoyl-L-alanine a... 119 3e-25
gi|152993325|ref|YP_001359046.1| N-acetylmuramoyl-L-alanine... 119 3e-25
gi|57167619|ref|ZP_00366759.1| N-acetylmuramoyl-L-alanine a... 119 5e-25
gi|152990510|ref|YP_001356232.1| N-acetylmuramoyl-L-alanine... 119 5e-25
gi|116748175|ref|YP_844862.1| N-acetylmuramoyl-L-alanine am... 118 8e-25
gi|16079475|ref|NP_390299.1| hypothetical protein BSU24190 ... 117 1e-24
gi|119897534|ref|YP_932747.1| conserved hypothetical N-acet... 117 2e-24
gi|157085067|gb|ABV14745.1| hypothetical protein CKO_03666 ... 116 2e-24
gi|118070257|ref|ZP_01538490.1| cell wall hydrolase/autolys... 116 2e-24
gi|138896739|ref|YP_001127192.1| Surface-layer N-acetylmura... 116 2e-24
gi|37528403|ref|NP_931748.1| N-acetylmuramoyl-L-alanine ami... 116 3e-24
gi|114331871|ref|YP_748093.1| N-acetylmuramoyl-L-alanine am... 116 3e-24
gi|149927688|ref|ZP_01915940.1| N-Acetylmuramoyl-L-alanine ... 115 4e-24
gi|118745452|ref|ZP_01593426.1| N-acetylmuramoyl-L-alanine ... 115 5e-24
gi|57505450|ref|ZP_00371378.1| N-acetylmuramoyl-L-alanine a... 115 5e-24
gi|30248667|ref|NP_840737.1| Cell wall hydrolase/autolysin ... 115 6e-24
gi|109673042|ref|ZP_01375275.1| N-acetylmuramoyl-L-alanine ... 115 6e-24
gi|108813461|ref|YP_649228.1| N-acetylmuramoyl-L-alanine am... 115 7e-24
gi|154174999|ref|YP_001407882.1| N-acetylmuramoyl-L-alanine... 115 7e-24
gi|22124541|ref|NP_667964.1| N-acetylmuramoyl-l-alanine ami... 114 1e-23
gi|94263068|ref|ZP_01286887.1| N-acetylmuramoyl-L-alanine a... 114 1e-23
gi|56694927|ref|YP_164437.1| lysin [Bacillus clarkii bacter... 114 1e-23
gi|134093682|ref|YP_001098757.1| N-acetylmuramoyl-L-alanine... 114 1e-23
gi|77633848|ref|ZP_00795963.1| COG0860: N-acetylmuramoyl-L-... 114 1e-23
gi|119878606|ref|ZP_01645522.1| N-acetylmuramoyl-L-alanine ... 113 2e-23
gi|15606778|ref|NP_214158.1| N-acetylmuramoyl-L-alanine ami... 113 2e-23
gi|110601902|ref|ZP_01390064.1| N-acetylmuramoyl-L-alanine ... 113 2e-23
gi|16120705|ref|NP_404018.1| putative N-acetylmuramoyl-L-al... 113 2e-23
gi|94266423|ref|ZP_01290118.1| N-acetylmuramoyl-L-alanine a... 113 2e-23
gi|77961308|ref|ZP_00825149.1| COG0860: N-acetylmuramoyl-L-... 113 2e-23
gi|91775734|ref|YP_545490.1| N-acetylmuramoyl-L-alanine ami... 113 3e-23
gi|56477957|ref|YP_159546.1| N-acetylmuramoyl-L-alanine ami... 113 3e-23
gi|51594774|ref|YP_068965.1| putative N-acetylmuramoyl-L-al... 112 3e-23
gi|152973039|ref|YP_001338185.1| N-acetylmuramoyl-l-alanine... 112 4e-23
gi|57241090|ref|ZP_00369037.1| N-acetylmuramoyl-L-alanine a... 112 4e-23
gi|77976473|ref|ZP_00831960.1| COG0860: N-acetylmuramoyl-L-... 112 4e-23
gi|152993324|ref|YP_001359045.1| N-acetylmuramoyl-L-alanine... 112 5e-23
gi|145621224|ref|ZP_01777210.1| N-acetylmuramoyl-L-alanine ... 112 6e-23
gi|34556684|ref|NP_906499.1| N-ACETYLMURAMOYL-L-ALANINE AMI... 111 7e-23
gi|41582283|gb|AAS07897.1| N-acetylmuramoyl-L-alanine amida... 111 8e-23
gi|153956344|ref|YP_001397109.1| hypothetical protein CKL_3... 111 9e-23
gi|53804639|ref|YP_113758.1| N-acetylmuramoyl-L-alanine ami... 111 1e-22
gi|152980575|ref|YP_001352154.1| N-acetylmuramoyl-L-alanine... 110 1e-22
gi|123440757|ref|YP_001004749.1| putative N-acetylmuramoyl-... 110 1e-22
gi|154686678|ref|YP_001421839.1| YqiI [Bacillus amyloliquef... 110 1e-22
gi|77163868|ref|YP_342393.1| N-acetylmuramoyl-L-alanine ami... 110 2e-22
gi|86159781|ref|YP_466566.1| N-acetylmuramoyl-L-alanine ami... 110 2e-22
gi|77957803|ref|ZP_00821850.1| COG0860: N-acetylmuramoyl-L-... 110 2e-22
gi|77973960|ref|ZP_00829503.1| COG0860: N-acetylmuramoyl-L-... 109 2e-22
gi|154149400|ref|YP_001406829.1| N-acetylmuramoyl-L-alanine... 109 3e-22
gi|146329139|ref|YP_001209231.1| N-acetylmuramoyl-L-alanine... 109 3e-22
gi|108758052|ref|YP_630238.1| N-acetylmuramoyl-L-alanine am... 109 3e-22
gi|148264431|ref|YP_001231137.1| N-acetylmuramoyl-L-alanine... 109 4e-22
gi|26251061|ref|NP_757101.1| N-acetylmuramoyl-L-alanine ami... 109 4e-22
gi|110808087|ref|YP_691607.1| N-acetylmuramoyl-L-alanine am... 109 4e-22
gi|30065541|ref|NP_839712.1| N-acetylmuramoyl-l-alanine ami... 109 4e-22
gi|75212282|ref|ZP_00712322.1| COG0860: N-acetylmuramoyl-L-... 108 5e-22
gi|146312597|ref|YP_001177671.1| N-acetylmuramoyl-L-alanine... 108 5e-22
gi|75236178|ref|ZP_00720300.1| COG0860: N-acetylmuramoyl-L-... 108 5e-22
gi|82777829|ref|YP_404178.1| N-acetylmuramoyl-l-alanine ami... 108 5e-22
gi|75188880|ref|ZP_00702147.1| COG0860: N-acetylmuramoyl-L-... 108 6e-22
gi|16131991|ref|NP_418590.1| N-acetylmuramoyl-l-alanine ami... 108 6e-22
gi|71735524|ref|YP_277236.1| N-acetylmuramoyl-L-alanine ami... 108 6e-22
gi|75515408|ref|ZP_00737565.1| COG0860: N-acetylmuramoyl-L-... 108 6e-22
gi|75227766|ref|ZP_00714495.1| COG0860: N-acetylmuramoyl-L-... 108 6e-22
gi|91213718|ref|YP_543704.1| N-acetylmuramoyl-L-alanine ami... 108 6e-22
gi|118579495|ref|YP_900745.1| N-acetylmuramoyl-L-alanine am... 108 6e-22
gi|15804758|ref|NP_290799.1| N-acetylmuramoyl-l-alanine ami... 108 6e-22
gi|15832560|ref|NP_311333.1| N-acetylmuramoyl-l-alanine ami... 108 7e-22
gi|16130360|ref|NP_416930.1| N-acetylmuramoyl-l-alanine ami... 108 7e-22
gi|115421826|emb|CAJ48344.1| N-acetylmuramoyl-L-alanine ami... 108 7e-22
gi|82779449|ref|YP_405798.1| N-acetylmuramoyl-l-alanine ami... 108 7e-22
gi|75179460|ref|ZP_00699464.1| COG0860: N-acetylmuramoyl-L-... 108 7e-22
gi|83585093|ref|ZP_00923746.1| COG0860: N-acetylmuramoyl-L-... 108 7e-22
gi|82546590|ref|YP_410537.1| N-acetylmuramoyl-l-alanine ami... 108 7e-22
gi|26248811|ref|NP_754851.1| Probable N-acetylmuramoyl-L-al... 108 8e-22
gi|91211773|ref|YP_541759.1| probable N-acetylmuramoyl-L-al... 108 8e-22
gi|134300120|ref|YP_001113616.1| N-acetylmuramoyl-L-alanine... 108 8e-22
gi|15645391|ref|NP_207565.1| N-acetylmuramoyl-L-alanine ami... 108 9e-22
gi|75196449|ref|ZP_00706519.1| COG0860: N-acetylmuramoyl-L-... 107 9e-22
gi|94987465|ref|YP_595398.1| N-acetylmuramoyl-L-alanine ami... 107 1e-21
gi|85058312|ref|YP_454014.1| N-acetylmuramoyl-l-alanine ami... 107 1e-21
gi|153875540|ref|ZP_02003294.1| Cell wall hydrolase/autolys... 107 1e-21
gi|157081836|gb|ABV11514.1| hypothetical protein CKO_00351 ... 107 1e-21
gi|78776921|ref|YP_393236.1| N-acetylmuramoyl-L-alanine ami... 107 1e-21
gi|118067913|ref|ZP_01536168.1| cell wall hydrolase/autolys... 107 1e-21
gi|16763177|ref|NP_458794.1| N-acetylmuramoyl-L-alanine ami... 107 2e-21
gi|21231737|ref|NP_637654.1| N-acetylmuramoyl-L-alanine ami... 107 2e-21
gi|156933011|ref|YP_001436927.1| hypothetical protein ESA_0... 107 2e-21
gi|28872633|ref|NP_795252.1| N-acetylmuramoyl-L-alanine ami... 107 2e-21
gi|15802966|ref|NP_288996.1| N-acetylmuramoyl-l-alanine ami... 107 2e-21
gi|73540290|ref|YP_294810.1| N-acetylmuramoyl-L-alanine ami... 107 2e-21
gi|114704662|ref|ZP_01437570.1| n-acetylmuramoyl-l-alanine ... 107 2e-21
gi|116690583|ref|YP_836206.1| N-acetylmuramoyl-L-alanine am... 106 2e-21
gi|56412664|ref|YP_149739.1| probable N-acetylmuramoyl-L-al... 106 2e-21
gi|107023501|ref|YP_621828.1| N-acetylmuramoyl-L-alanine am... 106 2e-21
gi|16765770|ref|NP_461385.1| N-acetylmuramoyl-l-alanine ami... 106 3e-21
gi|33591487|ref|NP_879131.1| N-acetylmuramoyl-L-alanine ami... 106 3e-21
gi|147677121|ref|YP_001211336.1| hypothetical protein PTH_0... 106 3e-21
gi|16761368|ref|NP_456985.1| probable N-acetylmuramoyl-L-al... 106 3e-21
gi|138896442|ref|YP_001126895.1| N-acetylmuramoyl-L-alanine... 106 3e-21
gi|84362788|ref|ZP_00987402.1| COG0860: N-acetylmuramoyl-L-... 106 3e-21
gi|32491017|ref|NP_871271.1| hypothetical protein WGLp268 [... 106 3e-21
gi|149920010|ref|ZP_01908484.1| N-acetylmuramoyl-L-alanine ... 106 3e-21
gi|108563182|ref|YP_627498.1| N-acetylmuramoyl-L-alanine am... 106 3e-21
gi|109947219|ref|YP_664447.1| hypothetical protein Hac_0641... 105 4e-21
gi|85059939|ref|YP_455641.1| N-acetylmuramoyl-L-alanine ami... 105 4e-21
gi|152971309|ref|YP_001336418.1| N-acetylmuramoyl-l-alanine... 105 4e-21
gi|156932400|ref|YP_001436316.1| hypothetical protein ESA_0... 105 4e-21
gi|56416149|ref|YP_153224.1| N-acetylmuramoyl-L-alanine ami... 105 4e-21
gi|153004973|ref|YP_001379298.1| N-acetylmuramoyl-L-alanine... 105 5e-21
gi|16767604|ref|NP_463219.1| N-acetylmuramoyl-l-alanine ami... 105 5e-21
gi|62182804|ref|YP_219221.1| N-acetylmuramoyl-l-alanine ami... 105 5e-21
gi|66048301|ref|YP_238142.1| N-acetylmuramoyl-L-alanine ami... 105 5e-21
gi|124002823|ref|ZP_01687675.1| putative N-acetylmuramoyl-L... 105 6e-21
gi|124267216|ref|YP_001021220.1| N-acetylmuramoyl-L-alanine... 105 6e-21
gi|82703647|ref|YP_413213.1| N-acetylmuramoyl-L-alanine ami... 105 6e-21
gi|84355584|ref|ZP_00980464.1| COG0860: N-acetylmuramoyl-L-... 105 6e-21
gi|94309471|ref|YP_582681.1| cell wall hydrolase/autolysin ... 105 8e-21
gi|154687677|ref|YP_001422838.1| LytC [Bacillus amyloliquef... 104 8e-21
gi|71908662|ref|YP_286249.1| Cell wall hydrolase/autolysin ... 104 8e-21
gi|42527220|ref|NP_972318.1| N-acetylmuramoyl-L-alanine ami... 104 8e-21
gi|91789059|ref|YP_550011.1| N-acetylmuramoyl-L-alanine ami... 104 9e-21
gi|89208508|ref|ZP_01187011.1| Cell wall hydrolase/autolysi... 104 1e-20
gi|70733459|ref|YP_263234.1| N-acetylmuramoyl-L-alanine ami... 104 1e-20
gi|126656939|ref|ZP_01728117.1| N-acetylmuramoyl-L-alanine ... 104 1e-20
gi|83719750|ref|YP_441278.1| N-acetylmuramoyl-L-alanine ami... 104 1e-20
gi|56965210|ref|YP_176942.1| hypothetical protein ABC3448 [... 104 1e-20
gi|74317537|ref|YP_315277.1| N-acetylmuramoyl-L-alanine ami... 103 1e-20
gi|118707432|ref|ZP_01560018.1| N-acetylmuramoyl-L-alanine ... 103 1e-20
gi|117925419|ref|YP_866036.1| N-acetylmuramoyl-L-alanine am... 103 2e-20
gi|53718498|ref|YP_107484.1| putative N-acetylmuramoyl-L-al... 103 2e-20
gi|126449032|ref|YP_001079693.1| N-acetylmuramoyl-L-alanine... 103 2e-20
gi|156932709|ref|YP_001436625.1| hypothetical protein ESA_0... 103 2e-20
gi|15611776|ref|NP_223427.1| putative PROBABLE N-ACETYLMURA... 103 2e-20
gi|17227589|ref|NP_484137.1| N-acetylmuramoyl-L-alanine ami... 103 2e-20
gi|146310017|ref|YP_001175091.1| N-acetylmuramoyl-L-alanine... 103 2e-20
gi|28899594|ref|NP_799199.1| N-acetylmuramoyl-L-alanine ami... 103 2e-20
gi|58582356|ref|YP_201372.1| N-acetylmuramoyl-L-alanine ami... 103 2e-20
gi|121604078|ref|YP_981407.1| N-acetylmuramoyl-L-alanine am... 103 2e-20
gi|15600731|ref|NP_254225.1| N-acetylmuramoyl-L-alanine ami... 103 2e-20
gi|118717292|ref|ZP_01569828.1| N-acetylmuramoyl-L-alanine ... 103 2e-20
gi|126442238|ref|YP_001057958.1| putative N-acetylmuramoyl-... 103 2e-20
gi|153840109|ref|ZP_01992776.1| N-acetylmuramoyl-L-alanine ... 103 2e-20
gi|88704499|ref|ZP_01102213.1| N-acetylmuramoyl-L-alanine a... 103 2e-20
gi|84624235|ref|YP_451607.1| N-acetylmuramoyl-L-alanine ami... 103 2e-20
gi|78067364|ref|YP_370133.1| N-acetylmuramoyl-L-alanine ami... 103 2e-20
gi|77461877|ref|YP_351384.1| N-acetylmuramoyl-L-alanine ami... 103 3e-20
gi|149377527|ref|ZP_01895268.1| N-acetylmuramoyl-L-alanine ... 103 3e-20
gi|148358565|ref|YP_001249772.1| N-acetylmuramoyl-L-alanine... 102 3e-20
gi|116053689|ref|YP_794016.1| N-acetylmuramoyl-L-alanine am... 102 3e-20
gi|113866624|ref|YP_725113.1| N-Acetylmuramoyl-L-alanine am... 102 3e-20
gi|115352662|ref|YP_774501.1| N-acetylmuramoyl-L-alanine am... 102 3e-20
gi|149194048|ref|ZP_01871146.1| N-acetylmuramoyl-L-alanine ... 102 3e-20
gi|145300257|ref|YP_001143098.1| N-acetylmuramoyl-L-alanine... 102 3e-20
gi|88810489|ref|ZP_01125746.1| N-acetylmuramoyl-L-alanine a... 102 3e-20
gi|52842904|ref|YP_096703.1| N-acetylmuramoyl-L-alanine ami... 102 3e-20
gi|118027912|ref|ZP_01499375.1| cell wall hydrolase/autolys... 102 3e-20
gi|21243140|ref|NP_642722.1| N-acetylmuramoyl-L-alanine ami... 102 4e-20
gi|52080951|ref|YP_079742.1| Cell wall hydrolase/autolysin ... 102 4e-20
gi|91227456|ref|ZP_01261820.1| N-acetylmuramoyl-L-alanine a... 102 4e-20
gi|94676650|ref|YP_589013.1| N-acetylmuramoyl-l-alanine ami... 102 4e-20
gi|118070133|ref|ZP_01538368.1| cell wall hydrolase/autolys... 102 4e-20
gi|84324857|ref|ZP_00972910.1| COG0860: N-acetylmuramoyl-L-... 102 4e-20
gi|54295539|ref|YP_127954.1| hypothetical protein lpl2626 [... 102 4e-20
gi|134296748|ref|YP_001120483.1| N-acetylmuramoyl-L-alanine... 102 4e-20
gi|149192038|ref|ZP_01870265.1| N-acetylmuramoyl-L-alanine ... 102 4e-20
gi|89094653|ref|ZP_01167590.1| N-acetylmuramoyl-L-alanine a... 102 4e-20
gi|75907688|ref|YP_321984.1| Cell wall hydrolase/autolysin ... 102 4e-20
gi|52143606|ref|YP_083222.1| S-layer protein and N-acetylmu... 102 4e-20
gi|116053096|ref|YP_793415.1| N-acetylmuramoyl-L-alanine am... 102 4e-20
gi|152989096|ref|YP_001350995.1| N-acetylmuramoyl-L-alanine... 102 5e-20
gi|119474826|ref|ZP_01615179.1| N-acetylmuramoyl-L-alanine ... 102 5e-20
gi|15600140|ref|NP_253634.1| N-acetylmuramoyl-L-alanine ami... 102 5e-20
gi|151937418|gb|EDN56278.1| N-acetylmuramoyl-L-alanine amid... 102 5e-20
gi|118039643|ref|ZP_01511042.1| cell wall hydrolase/autolys... 102 5e-20
gi|74313385|ref|YP_311804.1| putative amidase [Shigella son... 102 5e-20
gi|26249246|ref|NP_755286.1| N-acetylmuramoyl-L-alanine ami... 102 5e-20
gi|82778193|ref|YP_404542.1| putative amidase [Shigella dys... 102 5e-20
gi|38704120|ref|NP_311701.2| putative amidase [Escherichia ... 102 6e-20
gi|67155918|ref|ZP_00417545.1| N-acetylmuramoyl-L-alanine a... 102 6e-20
gi|54298689|ref|YP_125058.1| hypothetical protein lpp2753 [... 102 6e-20
gi|107104046|ref|ZP_01367964.1| hypothetical protein PaerPA... 102 6e-20
gi|116184700|ref|ZP_01474628.1| hypothetical protein VEx2w_... 102 6e-20
gi|120555683|ref|YP_960034.1| N-acetylmuramoyl-L-alanine am... 102 6e-20
gi|84317611|ref|ZP_00966050.1| COG0860: N-acetylmuramoyl-L-... 102 6e-20
gi|119502789|ref|ZP_01624874.1| N-acetylmuramoyl-L-alanine ... 101 7e-20
gi|78048159|ref|YP_364334.1| N-acetylmuramoyl-L-alanine ami... 101 7e-20
gi|125973552|ref|YP_001037462.1| cell wall hydrolase/autoly... 101 7e-20
gi|15803336|ref|NP_289369.1| putative amidase [Escherichia ... 101 7e-20
gi|109900274|ref|YP_663529.1| N-acetylmuramoyl-L-alanine am... 101 7e-20
gi|30020341|ref|NP_831972.1| Sporulation-specific N-acetylm... 101 8e-20
gi|75763616|ref|ZP_00743311.1| Sporulation-specific N-acety... 101 8e-20
gi|156972477|ref|YP_001443384.1| hypothetical protein VIBHA... 101 8e-20
gi|86136662|ref|ZP_01055241.1| N-acetylmuramoyl-L-alanine a... 101 1e-19
gi|23097675|ref|NP_691141.1| N-acetylmuramoyl-L-alanine ami... 101 1e-19
gi|78485427|ref|YP_391352.1| N-acetylmuramoyl-L-alanine ami... 101 1e-19
gi|94500525|ref|ZP_01307056.1| N-acetylmuramoyl-L-alanine a... 101 1e-19
gi|114565698|ref|YP_752852.1| N-acetylmuramoyl-L-alanine am... 100 1e-19
gi|90022315|ref|YP_528142.1| N-acetylmuramoyl-L-alanine ami... 100 1e-19
gi|118696904|ref|ZP_01554985.1| N-acetylmuramoyl-L-alanine ... 100 1e-19
gi|126700377|ref|YP_001089274.1| putative N-acetylmuramoyl-... 100 1e-19
gi|84515546|ref|ZP_01002908.1| N-acetylmuramoyl-L-alanine a... 100 1e-19
gi|117621060|ref|YP_855464.1| N-acetylmuramoyl-L-alanine am... 100 1e-19
gi|24114098|ref|NP_708608.1| putative amidase [Shigella fle... 100 1e-19
gi|110806754|ref|YP_690274.1| putative amidase [Shigella fl... 100 1e-19
gi|2160198|dbj|BAA01225.1| N-acetylmuramoyl-L-alanine amida... 100 1e-19
gi|16080615|ref|NP_391442.1| N-acetylmuramoyl-L-alanine ami... 100 1e-19
gi|29654392|ref|NP_820084.1| N-acetylmuramoyl-L-alanine ami... 100 2e-19
gi|28211710|ref|NP_782654.1| N-acetylmuramoyl-L-alanine ami... 100 2e-19
gi|91785034|ref|YP_560240.1| N-acetylmuramoyl-L-alanine ami... 100 2e-19
gi|75762707|ref|ZP_00742543.1| S-layer protein / N-acetylmu... 100 2e-19
gi|83749117|ref|ZP_00946122.1| AmiC [Ralstonia solanacearum... 100 2e-19
gi|34499277|ref|NP_903492.1| probable N-acetylmuramoyl-L-al... 100 2e-19
gi|115377519|ref|ZP_01464719.1| N-acetylmuramoyl-L-alanine ... 100 2e-19
gi|83589381|ref|YP_429390.1| N-acetylmuramoyl-L-alanine ami... 100 2e-19
gi|52787488|ref|YP_093317.1| LytC [Bacillus licheniformis A... 100 3e-19
gi|119509563|ref|ZP_01628710.1| Cell wall hydrolase/autolys... 100 3e-19
gi|95927871|ref|ZP_01310623.1| hypothetical protein CburR_0... 100 3e-19
gi|75907687|ref|YP_321983.1| Cell wall hydrolase/autolysin ... 100 3e-19
gi|153208457|ref|ZP_01946760.1| N-acetylmuramoyl-L-alanine ... 100 3e-19
gi|33240494|ref|NP_875436.1| N-acetylmuramoyl-L-alanine ami... 100 3e-19
gi|89902072|ref|YP_524543.1| N-acetylmuramoyl-L-alanine ami... 100 3e-19
gi|154707251|ref|YP_001424552.1| N-acetylmuramoyl-L-alanine... 100 3e-19
gi|52082098|ref|YP_080889.1| N-acetylmuramoyl-L-alanine ami... 100 3e-19
gi|49476960|ref|YP_035139.1| N-acetylmuramoyl-L-alanine ami... 100 3e-19
gi|91070143|gb|ABE11065.1| cell wall hydrolase/autolysin [u... 99 3e-19
gi|42524117|ref|NP_969497.1| hypothetical protein Bd2699 [B... 99 3e-19
gi|118477283|ref|YP_894434.1| N-acetylmuramoyl-L-alanine am... 99 4e-19
gi|17227588|ref|NP_484136.1| N-acetylmuramoyl-L-alanine ami... 99 4e-19
gi|152971744|ref|YP_001336853.1| N-acetylmuramoyl-L-alanine... 99 5e-19
gi|17547258|ref|NP_520660.1| PROBABLE N-ACETYLMURAMOYL-L-AL... 99 5e-19
gi|37524646|ref|NP_927990.1| N-acetylmuramoyl-L-alanine ami... 99 5e-19
gi|117919047|ref|YP_868239.1| cell wall hydrolase/autolysin... 99 5e-19
gi|157085565|gb|ABV15243.1| hypothetical protein CKO_04182 ... 99 6e-19
gi|16329723|ref|NP_440451.1| N-acetylmuramoyl-L-alanine ami... 99 6e-19
gi|16126119|ref|NP_420683.1| N-acetylmuramoyl-L-alanine ami... 99 6e-19
gi|47565546|ref|ZP_00236587.1| S-layer protein / N-acetylmu... 99 6e-19
gi|46199308|ref|YP_004975.1| N-acetylmuramoyl-L-alanine ami... 99 6e-19
gi|113968939|ref|YP_732732.1| N-acetylmuramoyl-L-alanine am... 99 6e-19
gi|114048923|ref|YP_739473.1| N-acetylmuramoyl-L-alanine am... 99 6e-19
gi|16761767|ref|NP_457384.1| N-acetylmuramoyl-L-alanine ami... 99 6e-19
gi|153885664|ref|ZP_02006820.1| N-acetylmuramoyl-L-alanine ... 99 6e-19
gi|16766293|ref|NP_461908.1| N-acetylmuramoyl-L-alanine ami... 99 6e-19
gi|152987900|ref|YP_001351651.1| N-acetylmuramoyl-L-alanine... 99 7e-19
gi|41058924|gb|AAR99070.1| putative acetyl-muramoyl-alanine... 98 8e-19
gi|15640371|ref|NP_229998.1| N-acetylmuramoyl-L-alanine ami... 98 8e-19
gi|153217194|ref|ZP_01950958.1| N-acetylmuramoyl-L-alanine ... 98 8e-19
gi|145621932|ref|ZP_01777896.1| cell wall hydrolase/autolys... 98 8e-19
gi|153827309|ref|ZP_01979976.1| N-acetylmuramoyl-L-alanine ... 98 8e-19
gi|77974560|ref|ZP_00830100.1| COG0860: N-acetylmuramoyl-L-... 98 8e-19
gi|125620364|gb|EAZ48746.1| N-acetylmuramoyl-L-alanine amid... 98 9e-19
gi|85374180|ref|YP_458242.1| N-acetylmuramoyl-L-alanine ami... 98 9e-19
gi|116218710|ref|ZP_01484312.1| hypothetical protein VchoV5... 98 9e-19
gi|27364691|ref|NP_760219.1| N-acetylmuramoyl-L-alanine ami... 98 1e-18
gi|21392936|ref|NP_653015.1| surface-layer N-acetylmuramoyl... 98 1e-18
gi|10956432|ref|NP_053197.1| hypothetical protein pxo2_42 [... 98 1e-18
gi|113951214|ref|ZP_01436799.1| N-acetylmuramoyl-L-alanine ... 98 1e-18
gi|153002276|ref|YP_001367957.1| N-acetylmuramoyl-L-alanine... 98 1e-18
gi|121527733|ref|ZP_01660347.1| N-acetylmuramoyl-L-alanine ... 97 1e-18
gi|126172804|ref|YP_001048953.1| N-acetylmuramoyl-L-alanine... 97 1e-18
gi|127511497|ref|YP_001092694.1| N-acetylmuramoyl-L-alanine... 97 1e-18
gi|15613529|ref|NP_241832.1| N-acetylmuramoyl-L-alanine ami... 97 1e-18
gi|153803484|ref|ZP_01958070.1| N-acetylmuramoyl-L-alanine ... 97 1e-18
gi|118594934|ref|ZP_01552281.1| N-acetylmuramoyl-L-alanine ... 97 2e-18
gi|77958889|ref|ZP_00822915.1| COG0860: N-acetylmuramoyl-L-... 97 2e-18
gi|91794556|ref|YP_564207.1| N-acetylmuramoyl-L-alanine ami... 97 2e-18
gi|110680028|ref|YP_683035.1| N-acetylmuramoyl-L-alanine am... 97 2e-18
gi|89211140|ref|ZP_01189516.1| Cell wall hydrolase/autolysi... 97 2e-18
gi|88795724|ref|ZP_01111416.1| N-acetylmuramoyl-l-alanine a... 97 2e-18
gi|126666948|ref|ZP_01737924.1| N-acetylmuramoyl-L-alanine ... 97 2e-18
gi|67921666|ref|ZP_00515184.1| N-acetylmuramoyl-L-alanine a... 97 2e-18
gi|153830893|ref|ZP_01983560.1| N-acetylmuramoyl-L-alanine ... 97 2e-18
gi|103488648|ref|YP_618209.1| N-acetylmuramoyl-L-alanine am... 97 2e-18
gi|123968207|ref|YP_001009065.1| Cell wall hydrolase/autoly... 97 2e-18
gi|123443507|ref|YP_001007480.1| N-acetylmuramoyl-L-alanine... 97 2e-18
gi|156719118|ref|ZP_02060766.1| N-acetylmuramoyl-L-alanine ... 97 2e-18
gi|77963196|ref|ZP_00827008.1| COG0860: N-acetylmuramoyl-L-... 97 2e-18
gi|123965916|ref|YP_001010997.1| Cell wall hydrolase/autoly... 97 3e-18
gi|146743259|gb|ABQ42875.1| cell wall hydrolase/autolysin [... 96 3e-18
gi|33151670|ref|NP_873023.1| N-acetylmuramoyl-L-alanine ami... 96 3e-18
gi|67922340|ref|ZP_00515852.1| N-acetylmuramoyl-L-alanine a... 96 3e-18
gi|59712933|ref|YP_205709.1| N-acetylmuramoyl-L-alanine ami... 96 3e-18
gi|126208606|ref|YP_001053831.1| putative N-acetylmuramoyl-... 96 3e-18
gi|50119940|ref|YP_049107.1| N-acetylmuramoyl-L-alanine ami... 96 3e-18
gi|120597489|ref|YP_962063.1| N-acetylmuramoyl-L-alanine am... 96 4e-18
gi|124544841|ref|ZP_01704089.1| cell wall hydrolase/autolys... 96 4e-18
gi|78779001|ref|YP_397113.1| Cell wall hydrolase/autolysin ... 96 4e-18
gi|55981341|ref|YP_144638.1| N-acetylmuramoyl-L-alanine ami... 96 4e-18
gi|94429031|gb|ABF18947.1| N-acetylmuramoyl-L-alanine amida... 96 4e-18
gi|77978961|ref|ZP_00834384.1| COG0860: N-acetylmuramoyl-L-... 96 4e-18
gi|88798916|ref|ZP_01114498.1| N-acetylmuramoyl-L-alanine a... 96 4e-18
gi|71275151|ref|ZP_00651438.1| N-acetylmuramoyl-L-alanine a... 96 4e-18
gi|84703990|ref|ZP_01017818.1| N-acetylmuramoyl-L-alanine a... 96 4e-18
gi|146283983|ref|YP_001174136.1| N-acetylmuramoyl-L-alanine... 96 4e-18
gi|28199766|ref|NP_780080.1| N-acetylmuramoyl-L-alanine ami... 96 4e-18
gi|75762723|ref|ZP_00742557.1| S-layer protein / N-acetylmu... 96 5e-18
gi|150382632|ref|ZP_01921555.1| N-acetylmuramoyl-L-alanine ... 96 5e-18
gi|118477928|ref|YP_895079.1| N-acetylmuramoyl-L-alanine am... 96 5e-18
gi|118052518|ref|ZP_01521065.1| cell wall hydrolase/autolys... 96 5e-18
gi|33861173|ref|NP_892734.1| Cell wall hydrolase/autolysin ... 96 5e-18
gi|148261019|ref|YP_001235146.1| N-acetylmuramoyl-L-alanine... 96 5e-18
gi|30021626|ref|NP_833257.1| S-layer protein / N-acetylmura... 96 5e-18
gi|28210024|ref|NP_780968.1| N-acetylmuramoyl-L-alanine ami... 96 6e-18
gi|150388783|ref|YP_001318832.1| N-acetylmuramoyl-L-alanine... 96 6e-18
gi|126726321|ref|ZP_01742162.1| N-acetylmuramoyl-L-alanine ... 96 6e-18
gi|53728765|ref|ZP_00135215.2| COG0860: N-acetylmuramoyl-L-... 96 6e-18
gi|119484471|ref|ZP_01619088.1| N-acetylmuramoyl-L-alanine ... 95 6e-18
gi|154425371|dbj|BAF74769.1| hypothetical protein [Bacillus... 95 6e-18
gi|145588780|ref|YP_001155377.1| N-acetylmuramoyl-L-alanine... 95 6e-18
gi|118756268|ref|ZP_01604048.1| N-acetylmuramoyl-L-alanine ... 95 6e-18
gi|16330376|ref|NP_441104.1| N-acetylmuramoyl-L-alanine ami... 95 7e-18
gi|15837361|ref|NP_298049.1| N-acetylmuramoyl-L-alanine ami... 95 7e-18
gi|150384199|ref|ZP_01922903.1| cell wall hydrolase/autolys... 95 7e-18
gi|146296527|ref|YP_001180298.1| N-acetylmuramoyl-L-alanine... 95 7e-18
gi|146312901|ref|YP_001177975.1| N-acetylmuramoyl-L-alanine... 95 9e-18
gi|15616227|ref|NP_244532.1| N-acetylmuramoyl-L-alanine ami... 95 9e-18
gi|90417705|ref|ZP_01225617.1| N-acetylmuramoyl-L-alanine a... 95 9e-18
gi|32266327|ref|NP_860359.1| N-acetylmuramoyl-L-alanine ami... 95 1e-17
gi|118729102|ref|ZP_01577619.1| N-acetylmuramoyl-L-alanine ... 95 1e-17
gi|22127037|ref|NP_670460.1| amidase [Yersinia pestis KIM] ... 94 1e-17
gi|84393189|ref|ZP_00991953.1| N-acetylmuramoyl-L-alanine a... 94 1e-17
gi|56418744|ref|YP_146062.1| N-acetylmuramoyl-L-alanine ami... 94 1e-17
gi|49476720|ref|YP_036636.1| N-acetylmuramoyl-L-alanine ami... 94 1e-17
gi|94495887|ref|ZP_01302466.1| N-acetylmuramoyl-L-alanine a... 94 1e-17
gi|115334645|ref|YP_764491.1| N-acetylmuramoyl-L-alanine am... 94 1e-17
gi|56551091|ref|YP_161930.1| N-acetylmuramoyl-L-alanine ami... 94 1e-17
gi|121593403|ref|YP_985299.1| N-acetylmuramoyl-L-alanine am... 94 2e-17
gi|37520534|ref|NP_923911.1| N-acetylmuramoyl-L-alanine ami... 94 2e-17
gi|126358415|ref|ZP_01715414.1| N-acetylmuramoyl-L-alanine ... 94 2e-17
gi|89100992|ref|ZP_01173836.1| CwlC [Bacillus sp. NRRL B-14... 94 2e-17
gi|126695980|ref|YP_001090866.1| Cell wall hydrolase/autoly... 94 2e-17
gi|121997466|ref|YP_001002253.1| N-acetylmuramoyl-L-alanine... 94 2e-17
gi|83648046|ref|YP_436481.1| N-acetylmuramoyl-L-alanine ami... 94 2e-17
gi|16121324|ref|NP_404637.1| N-acetylmuramoyl-L-alanine ami... 94 2e-17
gi|24372191|ref|NP_716233.1| N-acetylmuramoyl-L-alanine ami... 94 2e-17
gi|24216133|ref|NP_713614.1| N-acetylmuramoyl-L-alanine ami... 94 2e-17
gi|45656635|ref|YP_000721.1| N-acetylmuramoyl-L-alanine ami... 94 2e-17
gi|87124212|ref|ZP_01080061.1| Cell wall hydrolase/autolysi... 94 2e-17
gi|53687391|ref|ZP_00107791.2| COG0860: N-acetylmuramoyl-L-... 94 2e-17
gi|153091055|gb|EDN73060.1| N-acetylmuramoyl-L-alanine amid... 94 2e-17
gi|155042951|ref|YP_001425618.1| N-acetylmuramoyl-L-alanine... 94 2e-17
gi|121535191|ref|ZP_01667006.1| N-acetylmuramoyl-L-alanine ... 94 2e-17
gi|149184654|ref|ZP_01862972.1| N-acetylmuramoyl-L-alanine ... 94 2e-17
gi|71901138|ref|ZP_00683244.1| N-acetylmuramoyl-L-alanine a... 94 2e-17
gi|90102187|gb|ABD85291.1| AmiB [Listonella anguillarum] 94 2e-17
gi|53728347|ref|ZP_00133167.2| COG0860: N-acetylmuramoyl-L-... 94 2e-17
gi|119858800|ref|ZP_01640220.1| N-acetylmuramoyl-L-alanine ... 94 2e-17
gi|56421689|ref|YP_149007.1| hypothetical protein GK3154 [G... 94 2e-17
gi|30262520|ref|NP_844897.1| N-acetylmuramoyl-L-alanine ami... 94 2e-17
gi|88858901|ref|ZP_01133542.1| N-acetylmuramoyl-l-alanine a... 94 2e-17
gi|99080707|ref|YP_612861.1| N-acetylmuramoyl-L-alanine ami... 94 2e-17
gi|119776160|ref|YP_928900.1| N-acetylmuramoyl-L-alanine am... 94 2e-17
gi|81096599|ref|ZP_00874938.1| Cell wall hydrolase/autolysi... 94 2e-17
gi|146318948|ref|YP_001198660.1| N-acetylmuramoyl-L-alanine... 94 2e-17
gi|146743255|gb|ABQ42873.1| cell wall hydrolase/autolysin [... 94 2e-17
gi|146743251|gb|ABQ42871.1| cell wall hydrolase/autolysin [... 94 2e-17
gi|146743257|gb|ABQ42874.1| cell wall hydrolase/autolysin [... 94 2e-17
gi|110835067|ref|YP_693926.1| N-acetylmuramoyl-L-alanine am... 93 2e-17
gi|146743253|gb|ABQ42872.1| cell wall hydrolase/autolysin [... 93 2e-17
gi|52142972|ref|YP_083858.1| N-acetylmuramoyl-L-alanine ami... 93 2e-17
gi|120609992|ref|YP_969670.1| N-acetylmuramoyl-L-alanine am... 93 2e-17
gi|15794908|ref|NP_284730.1| N-acetylmuramoyl-L-alanine ami... 93 3e-17
gi|33865543|ref|NP_897102.1| Cell wall hydrolase/autolysin ... 93 3e-17
gi|91070264|gb|ABE11183.1| cell wall hydrolase/autolysin [u... 93 3e-17
gi|113461225|ref|YP_719294.1| N-acetylmuramoyl-L-alanine am... 93 3e-17
gi|87303354|ref|ZP_01086142.1| Cell wall hydrolase/autolysi... 93 3e-17
gi|154686154|ref|YP_001421315.1| CwlC [Bacillus amyloliquef... 93 3e-17
gi|148549975|ref|YP_001270077.1| N-acetylmuramoyl-L-alanine... 93 4e-17
gi|26991575|ref|NP_747000.1| N-acetylmuramoyl-L-alanine ami... 93 4e-17
gi|89209408|ref|ZP_01187831.1| S-layer-like region:Cell wal... 92 4e-17
gi|729234|sp|Q06320|CWLC_BACSU Sporulation-specific N-acety... 92 4e-17
gi|89893980|ref|YP_517467.1| hypothetical protein DSY1234 [... 92 5e-17
gi|67157126|ref|ZP_00418488.1| N-acetylmuramoyl-L-alanine a... 92 5e-17
gi|20808785|ref|NP_623956.1| N-acetylmuramoyl-L-alanine ami... 92 5e-17
gi|16078804|ref|NP_389623.1| N-acetylmuramoyl-L-alanine ami... 92 5e-17
gi|154499977|ref|ZP_02038015.1| hypothetical protein BACCAP... 92 6e-17
gi|86148237|ref|ZP_01066534.1| N-acetylmuramoyl-L-alanine a... 92 6e-17
gi|126735598|ref|ZP_01751343.1| N-acetylmuramoyl-L-alanine ... 92 6e-17
gi|23098309|ref|NP_691775.1| N-acetylmuramoyl-L-alanine ami... 92 6e-17
gi|15613858|ref|NP_242161.1| hypothetical protein BH1295 [B... 92 7e-17
gi|148981052|ref|ZP_01816272.1| N-acetylmuramoyl-L-alanine ... 92 7e-17
gi|76796114|ref|ZP_00778482.1| Cell wall hydrolase/autolysi... 92 7e-17
gi|6939616|dbj|BAA90648.1| CwlU [Paenibacillus polymyxa] 92 8e-17
gi|6274532|gb|AAF06680.1|AF163663_5 putative N-acetylmuramo... 92 8e-17
gi|84517902|ref|ZP_01005251.1| Cell wall hydrolase/autolysi... 92 8e-17
gi|59801840|ref|YP_208552.1| putative amidase [Neisseria go... 92 9e-17
gi|33862667|ref|NP_894227.1| Cell wall hydrolase/autolysin ... 92 9e-17
gi|149182789|ref|ZP_01861252.1| sporulation specific N-acet... 92 9e-17
gi|83590120|ref|YP_430129.1| N-acetylmuramoyl-L-alanine ami... 91 9e-17
gi|138893863|ref|YP_001124316.1| N-acetylmuramoyl-L-alanine... 91 9e-17
gi|54310433|ref|YP_131453.1| putative N-acetylmuramoyl-L-al... 91 9e-17
gi|153893176|ref|ZP_02013957.1| N-acetylmuramoyl-L-alanine ... 91 1e-16
gi|121635401|ref|YP_975646.1| N-acetylmuramoyl-L-alanine am... 91 1e-16
gi|493489|emb|CAA42675.1| bacteriolytic enzyme [Bacillus sp.] 91 1e-16
gi|87122648|ref|ZP_01078525.1| N-acetylmuramoyl-L-alanine a... 91 1e-16
gi|148239372|ref|YP_001224759.1| N-acetylmuramoyl-L-alanine... 91 1e-16
gi|116327339|ref|YP_797059.1| N-acetylmuramoyl-L-alanine am... 91 1e-16
gi|42780060|ref|NP_977307.1| N-acetylmuramoyl-L-alanine ami... 91 1e-16
gi|15617166|ref|NP_240379.1| N-acetylmuramoyl-L-alanine ami... 91 1e-16
gi|90414478|ref|ZP_01222454.1| putative N-acetylmuramoyl-L-... 91 1e-16
gi|152977457|ref|YP_001376974.1| cell wall hydrolase/autoly... 91 2e-16
gi|15676367|ref|NP_273503.1| N-acetylmuramoyl-L-alanine ami... 91 2e-16
gi|153006269|ref|YP_001380594.1| N-acetylmuramoyl-L-alanine... 91 2e-16
gi|86607857|ref|YP_476619.1| N-acetylmuramoyl-L-alanine ami... 91 2e-16
gi|126739122|ref|ZP_01754816.1| N-acetylmuramoyl-L-alanine ... 91 2e-16
gi|114564475|ref|YP_751989.1| N-acetylmuramoyl-L-alanine am... 91 2e-16
gi|118443466|ref|YP_879115.1| N-acetylmuramoyl-L-alanine am... 91 2e-16
gi|52079443|ref|YP_078234.1| N-acetylmuramoyl-L-alanine ami... 91 2e-16
gi|27904992|ref|NP_778118.1| putative N-acetylmuramoyl-L-al... 91 2e-16
gi|119632701|gb|ABL84358.1| cell wall hydrolase/autolysin [... 90 2e-16
gi|65319817|ref|ZP_00392776.1| COG0860: N-acetylmuramoyl-L-... 90 2e-16
gi|83858492|ref|ZP_00952014.1| N-acetylmuramoyl-L-alanine a... 90 2e-16
gi|77359235|ref|YP_338810.1| N-acetylmuramoyl-l-alanine ami... 90 2e-16
gi|104783875|ref|YP_610373.1| N-acetylmuramoyl-L-alanine am... 90 2e-16
gi|146305667|ref|YP_001186132.1| N-acetylmuramoyl-L-alanine... 90 2e-16
gi|22777706|dbj|BAC13978.1| N-acetylmuramoyl-L-alanine amid... 90 2e-16
gi|124023593|ref|YP_001017900.1| Cell wall hydrolase/autoly... 90 2e-16
gi|118071887|ref|ZP_01540080.1| cell wall hydrolase/autolys... 90 2e-16
gi|152996648|ref|YP_001341483.1| N-acetylmuramoyl-L-alanine... 90 3e-16
gi|6449086|gb|AAF08815.1|AF194079_2 AmiC [Neisseria meningi... 90 3e-16
gi|30019057|ref|NP_830688.1| S-layer protein / N-acetylmura... 90 3e-16
gi|66043836|ref|YP_233677.1| N-acetylmuramoyl-L-alanine ami... 90 3e-16
gi|121602571|ref|YP_989092.1| N-acetylmuramoyl-l-alanine am... 90 3e-16
gi|126661300|ref|ZP_01732370.1| N-acetylmuramoyl-L-alanine ... 90 3e-16
gi|15639239|ref|NP_218687.1| N-acetylmuramoyl-L-alanine ami... 90 3e-16
gi|92113400|ref|YP_573328.1| N-acetylmuramoyl-L-alanine ami... 90 3e-16
gi|33519556|ref|NP_878388.1| N-acetylmuramoyl-L-alanine ami... 90 3e-16
gi|19704669|ref|NP_604231.1| N-acetylmuramoyl-L-alanine ami... 89 3e-16
gi|52144424|ref|YP_082404.1| N-acetylmuramoyl-L-alanine ami... 89 3e-16
gi|85708769|ref|ZP_01039835.1| N-acetylmuramoyl-L-alanine a... 89 4e-16
gi|116070410|ref|ZP_01467679.1| N-acetylmuramoyl-L-alanine ... 89 4e-16
gi|116074592|ref|ZP_01471853.1| Cell wall hydrolase/autolys... 89 4e-16
gi|149183035|ref|ZP_01861489.1| CwlC [Bacillus sp. SG-1] >g... 89 4e-16
gi|94984772|ref|YP_604136.1| N-acetylmuramoyl-L-alanine ami... 89 4e-16
gi|153938972|ref|YP_001392389.1| N-acetylmuramoyl-L-alanine... 89 4e-16
gi|22855096|ref|NP_690702.1| hypothetical protein SPP1p051 ... 89 4e-16
>gi|34540786|ref|NP_905265.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Porphyromonas
gingivalis W83]
gi|34397100|gb|AAQ66164.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Porphyromonas
gingivalis W83]
Length = 396
Score = 738 bits (1904), Expect = 0.0, Method: Composition-based stats.
Identities = 396/396 (100%), Positives = 396/396 (100%)
Query: 1 MSRKNHTHYLLLWMTALLLIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINL 60
MSRKNHTHYLLLWMTALLLIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINL
Sbjct: 1 MSRKNHTHYLLLWMTALLLIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINL 60
Query: 61 AVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGG 120
AVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGG
Sbjct: 61 AVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGG 120
Query: 121 YGTETYVMGHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQD 180
YGTETYVMGHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQD
Sbjct: 121 YGTETYVMGHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQD 180
Query: 181 QSIKLAQQIQKGFVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAG 240
QSIKLAQQIQKGFVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAG
Sbjct: 181 QSIKLAQQIQKGFVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAG 240
Query: 241 RDELASAIARGFARYKEDYDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKE 300
RDELASAIARGFARYKEDYDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKE
Sbjct: 241 RDELASAIARGFARYKEDYDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKE 300
Query: 301 SIAPKGHAVKPDEGAHSAKKTYKIQILSSTTKLKNGDKRLKGYKVVIEQRGGRFFYLTGA 360
SIAPKGHAVKPDEGAHSAKKTYKIQILSSTTKLKNGDKRLKGYKVVIEQRGGRFFYLTGA
Sbjct: 301 SIAPKGHAVKPDEGAHSAKKTYKIQILSSTTKLKNGDKRLKGYKVVIEQRGGRFFYLTGA 360
Query: 361 VSSEDEARHLRKKVRKSFPDAYIVVYEAGKRVREIY 396
VSSEDEARHLRKKVRKSFPDAYIVVYEAGKRVREIY
Sbjct: 361 VSSEDEARHLRKKVRKSFPDAYIVVYEAGKRVREIY 396
>gi|154491706|ref|ZP_02031332.1| hypothetical protein PARMER_01317 [Parabacteroides merdae ATCC
43184]
gi|154087947|gb|EDN86992.1| hypothetical protein PARMER_01317 [Parabacteroides merdae ATCC
43184]
Length = 437
Score = 311 bits (796), Expect = 6e-83, Method: Composition-based stats.
Identities = 176/390 (45%), Positives = 241/390 (61%), Gaps = 15/390 (3%)
Query: 17 LLLIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPD 76
+ L LP+ + + FTVVIDAGHGG D GA G+ + EK INLAVALR+G LI KH D
Sbjct: 49 IALFFVLPVSQAKEKTFTVVIDAGHGGKDPGARGSSINEKAINLAVALRLGSLISEKHDD 108
Query: 77 VKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKN 136
VKV+YTR+ D F+ L RA AN+N ADLFISIH N+ +RG GTETY +G R +N
Sbjct: 109 VKVIYTRKTDVFIELDERANIANRNKADLFISIHTNAVKRGSSVSGTETYTLGLARTDEN 168
Query: 137 MAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK 196
+ V REN+ IL+E +Y Y+GFDP SSESYI+FE MQN + +QSI LA ++QK F +
Sbjct: 169 LEVAMRENSAILLEDNYLQKYEGFDPTSSESYIIFEFMQNKHMEQSISLASEVQKCFASA 228
Query: 197 GRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYK 256
R++RGV+ VL ++MPS+LVELG+ISNPAE R++ ++ G+++LA+AI F +YK
Sbjct: 229 KRNNRGVRQAGFLVLRKTSMPSILVELGYISNPAEERFMRTKEGQNKLATAIYNAFTKYK 288
Query: 257 EDYDRRSGKVSEPAPQA--------TEEEDKVEVEP-EDNGISSVADMSDGKESIAPKGH 307
+YDR+ G ++ A A ++ + P + I M + +S K
Sbjct: 289 WEYDRKRGALAGNASAAPILEVADNIDDNQPISAPPGSEEYIRQKNKMEESNQSRVSKSA 348
Query: 308 AVKPDEG-AHSAKKTYKIQILSSTTKLKNGDKRLKGYKVV---IEQRGGRFFYLTGAVSS 363
G + YKIQIL+S KL +G K KGYK V IE+ G + Y G +S
Sbjct: 349 VSAKQAGRVKKGQTIYKIQILTSDKKLSSGSKLFKGYKNVDYFIEK--GIYKYTYGETTS 406
Query: 364 EDEARHLRKKVRKSFPDAYIVVYEAGKRVR 393
D R LR++V K F DA+IV ++ GK+V+
Sbjct: 407 FDSIRKLRRQVAKDFKDAFIVAFKDGKKVK 436
>gi|150010523|ref|YP_001305266.1| conserved hypothetical protein, putative N-acetylmuramoyl-L-alanine
amidase amiA [Parabacteroides distasonis ATCC 8503]
gi|149938947|gb|ABR45644.1| conserved hypothetical protein, putative N-acetylmuramoyl-L-alanine
amidase amiA [Parabacteroides distasonis ATCC 8503]
Length = 373
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 163/372 (43%), Positives = 228/372 (61%), Gaps = 5/372 (1%)
Query: 23 LPLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYT 82
LP R + FTVVIDAGHGG D GA G + EK+INLAVAL++GRLI++ DV+V+YT
Sbjct: 5 LPGLQAREKTFTVVIDAGHGGKDPGARGANVNEKEINLAVALKLGRLIENNAEDVRVIYT 64
Query: 83 REKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQR 142
R+ D F+ L RA AN+N ADLF+SIH N+ +RG GTETY +G R+ +N+ V
Sbjct: 65 RKTDRFIELDERANIANRNKADLFVSIHTNAVKRGSTVQGTETYTLGLARSEENLEVAMS 124
Query: 143 ENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRG 202
EN+ IL+E +Y+ Y+GFDP SSESYI+FE MQN + +QSI LA +IQK F A R DRG
Sbjct: 125 ENSAILLEDNYQQRYEGFDPNSSESYIIFEFMQNKHMEQSISLASEIQKSFGACKRVDRG 184
Query: 203 VKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
V+ VL ++MPSVLVELG+ISN E +++ + AG+++LA A+ F +YK++YDRR
Sbjct: 185 VRQAGFLVLRKTSMPSVLVELGYISNRQEEQFMRTAAGQNKLAEALYDAFCKYKKNYDRR 244
Query: 263 SGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKTY 322
G +S E E + ++ + K S++ + +G K Y
Sbjct: 245 KGNISGAVVAPVANEKTPPPGSEADILNKKQQATRQKTSVSSTTSVNRNTKG----KVIY 300
Query: 323 KIQILSSTTKLKNGDKRLKGYKVV-IEQRGGRFFYLTGAVSSEDEARHLRKKVRKSFPDA 381
KIQ L+S KL + KGYK V G + Y G S + R +R+ + K F DA
Sbjct: 301 KIQFLTSNKKLPANSRLFKGYKNVDFYVEKGIYKYTYGETSDFNSIRKMRRTIAKDFKDA 360
Query: 382 YIVVYEAGKRVR 393
+I+ ++ GK+V+
Sbjct: 361 FIIAFKDGKKVK 372
>gi|153808750|ref|ZP_01961418.1| hypothetical protein BACCAC_03049 [Bacteroides caccae ATCC 43185]
gi|149128576|gb|EDM19794.1| hypothetical protein BACCAC_03049 [Bacteroides caccae ATCC 43185]
Length = 402
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 164/389 (42%), Positives = 228/389 (58%), Gaps = 16/389 (4%)
Query: 11 LLWMTALLLIVCLPLEGQR--NRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGR 68
+L++ L ++ LP R + F VVIDAGHGGHD GA+G +EK+INL VAL+VG
Sbjct: 8 ILYICICLWLLFLPSCTNRLWGKDFVVVIDAGHGGHDPGAIGKISKEKNINLNVALKVGN 67
Query: 69 LIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVM 128
LIK DVK++YTR KD F+ L RAE AN ADLFISIH N+ G T+ +
Sbjct: 68 LIKKNCDDVKLIYTRSKDVFIPLARRAEIANNAKADLFISIHTNALANNRTAKGASTWTL 127
Query: 129 GHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQ 188
G ++ N+ V +RENAVIL E DY T Y GF+P S+ESYI+FE MQ+ Y +QS+ LA
Sbjct: 128 GLAKSEANLEVAKRENAVILYESDYETRYAGFNPNSAESYIIFEFMQDKYMEQSVHLASL 187
Query: 189 IQKGFVAK-GRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASA 247
+QK F R DRGV VL SAMPS+LVELGFIS P E RYL SEAG + +A+
Sbjct: 188 VQKQFRHTCKRVDRGVHQAGFLVLKASAMPSILVELGFISTPEEERYLNSEAGANTMANG 247
Query: 248 IARGFARYKEDYDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGH 307
I R F YK +++ R VS+ A E+E+K + V + + ++ K
Sbjct: 248 IYRAFLNYKREHELRLTGVSKTIIPAEEQEEKN---------APVIAQASPQPAVTAKTT 298
Query: 308 AVKP---DEGAHSAKKTYKIQILSSTTKLKNGDKRLKGYK-VVIEQRGGRFFYLTGAVSS 363
+P + + ++ T+KIQIL+S+ L DKRLKG K V + G + Y GA +
Sbjct: 299 PKRPIVVESATNDSEITFKIQILTSSKPLTKNDKRLKGLKGVDYYKEKGIYKYTYGASAD 358
Query: 364 EDEARHLRKKVRKSFPDAYIVVYEAGKRV 392
++ ++ + F DA+I+ + G+++
Sbjct: 359 YNKVLRTKRSITAQFKDAFIIAFRNGEKM 387
>gi|156109557|gb|EDO11302.1| hypothetical protein BACOVA_03205 [Bacteroides ovatus ATCC 8483]
Length = 419
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 158/375 (42%), Positives = 214/375 (57%), Gaps = 13/375 (3%)
Query: 31 RAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVT 90
+ F VVIDAGHGGHD GA+G +EK+INL VAL+VG LIK DVKV+YTR KD F+
Sbjct: 30 KDFVVVIDAGHGGHDPGAIGKISKEKNINLNVALKVGNLIKRNCDDVKVIYTRSKDVFIP 89
Query: 91 LMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILME 150
L RAE AN ADLFISIH N+ G T+ +G ++ N+ V +REN+VIL E
Sbjct: 90 LDRRAEIANNAKADLFISIHTNALANNRTAKGASTWTLGLAKSDANLEVAKRENSVILYE 149
Query: 151 KDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH-DRGVKLGNLA 209
DY+T Y GF+P S+ESYI+FE MQ+ Y +QS+ LA +QK F R DRGV
Sbjct: 150 SDYKTRYAGFNPNSAESYIIFEFMQDKYMEQSVHLASLMQKQFRQTCRRADRGVHQAGFL 209
Query: 210 VLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVSEP 269
VL SAMPS+L+ELGFIS P E RYL SE G +A I R F YK +++ R VS+
Sbjct: 210 VLKASAMPSILIELGFISTPEEERYLNSEEGAGTMAKGIYRAFLNYKREHELRLTGVSKT 269
Query: 270 APQATEEEDK-----------VEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSA 318
+EED V P+ + + A + + + + +
Sbjct: 270 IVPTEQEEDNAPAIAQKDTESVNTAPQQEKLLAEAKTKPAATAKTAPKRPIVVESATNDS 329
Query: 319 KKTYKIQILSSTTKLKNGDKRLKGYKVV-IEQRGGRFFYLTGAVSSEDEARHLRKKVRKS 377
+ T+KIQIL+S+ L DKRLKG K V + GG + Y GA S ++ ++ +
Sbjct: 330 EITFKIQILTSSKPLAKNDKRLKGLKEVDYYKEGGIYKYTYGASSDYNKVLRTKRTITAQ 389
Query: 378 FPDAYIVVYEAGKRV 392
F DA+I+ + G+++
Sbjct: 390 FKDAFIIAFRNGEKM 404
>gi|156861320|gb|EDO54751.1| hypothetical protein BACUNI_01736 [Bacteroides uniformis ATCC 8492]
Length = 411
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 159/370 (42%), Positives = 212/370 (57%), Gaps = 11/370 (2%)
Query: 31 RAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVT 90
+ F VVID GHGGHD GAVG +EK+INL VAL++G+ IK PDVKV+YTR++D F+
Sbjct: 30 KDFVVVIDPGHGGHDPGAVGKISKEKNINLNVALKLGKQIKKNCPDVKVIYTRDRDIFIP 89
Query: 91 LMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILME 150
L RAE AN ADLFISIH N+ + G T+ +G ++ N+ V +RENAVIL E
Sbjct: 90 LDRRAEIANNAKADLFISIHTNALAKNRTAKGASTWTLGLAKSDANLEVAKRENAVILYE 149
Query: 151 KDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGVKLGNLA 209
DY+T Y GF+P S+ESYI+FE MQ+ Y QS+ LA +QK F R DRGV
Sbjct: 150 SDYKTRYAGFNPNSAESYIIFEFMQDKYMSQSVHLASLVQKHFRQTCKRTDRGVHQAGFL 209
Query: 210 VLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVS-- 267
VL SAMPS+LVELGFIS P E RYL +EAG LA+ I R F YK + + R S
Sbjct: 210 VLKASAMPSILVELGFISTPEEERYLNTEAGTTSLANGIFRAFLTYKREQEIRLNGSSNT 269
Query: 268 ---EPAPQATEEE-DKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKTYK 323
E P+ +EE + PE + + AV E + +K
Sbjct: 270 ILPEDVPEPVQEEGNAATATPEKKNAPQAESNQAAQRPQRSENAAVSQTE---QSGIVFK 326
Query: 324 IQILSSTTKLKNGDKRLKGYK-VVIEQRGGRFFYLTGAVSSEDEARHLRKKVRKSFPDAY 382
IQIL+S+ L DKRLKG K V + GG + Y GA ++ ++ + F DA+
Sbjct: 327 IQILTSSRPLAKNDKRLKGLKDVDYYKEGGIYKYTYGASPDYNKVLRSKRSITDKFKDAF 386
Query: 383 IVVYEAGKRV 392
I+ ++ G+++
Sbjct: 387 IIAFKNGEKI 396
>gi|29347551|ref|NP_811054.1| putative N-acetylmuramoyl-L-alanine amidase amiA [Bacteroides
thetaiotaomicron VPI-5482]
gi|29339451|gb|AAO77248.1| putative N-acetylmuramoyl-L-alanine amidase amiA [Bacteroides
thetaiotaomicron VPI-5482]
Length = 420
Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 158/395 (40%), Positives = 224/395 (56%), Gaps = 6/395 (1%)
Query: 1 MSRKNHTHYLLLWMTALLLIVC-LPLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDIN 59
++ K H Y+L L L+ L + + F VVIDAGHGGHD GA+G +EK+IN
Sbjct: 14 LNMKPHRTYILYISICLWLLASPLCIGNLWGKDFVVVIDAGHGGHDPGAIGKISKEKNIN 73
Query: 60 LAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHG 119
L VAL++G LIK DVKV+YTR +D F+ L RAE AN ADLFIS+H N+ +
Sbjct: 74 LNVALKLGNLIKKNCDDVKVIYTRSRDVFIPLDRRAEIANNAKADLFISVHTNALAKNRT 133
Query: 120 GYGTETYVMGHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQ 179
G T+ +G ++ N+ V +REN+VIL E DY+T Y GF+P S+ESYI+FE MQ+ Y
Sbjct: 134 AKGASTWTLGLAKSDANLEVAKRENSVILYESDYQTRYAGFNPNSAESYIIFEFMQDKYM 193
Query: 180 DQSIKLAQQIQKGFVAK-GRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSE 238
+QS+ LA +QK F R DRGV VL SAMPS+LVELGFIS P E RYL SE
Sbjct: 194 EQSVHLASLVQKQFRHTCKRVDRGVHQAGFLVLKASAMPSILVELGFISTPEEERYLNSE 253
Query: 239 AGRDELASAIARGFARYKEDYDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDG 298
AG + +A I F YK + + R ++ + E+ PE + + A +
Sbjct: 254 AGANTMAKGIYHAFLNYKREQEIR---LTGASKTIIPTEEPATSAPEQRELMAEASTTPA 310
Query: 299 KESIAPKGHAVKPDEGAHSAKKTYKIQILSSTTKLKNGDKRLKGYK-VVIEQRGGRFFYL 357
+ + + + ++ T+KIQIL+S+ L DKRLKG K V + G + Y
Sbjct: 311 TATKTAPKRPIVSESATNDSEITFKIQILTSSKPLTKNDKRLKGLKDVDYYKEKGLYKYT 370
Query: 358 TGAVSSEDEARHLRKKVRKSFPDAYIVVYEAGKRV 392
GA S ++ ++ + F DA+I+ + G+++
Sbjct: 371 YGASSDYNKVLRTKRTISAQFKDAFIIAFRNGEKM 405
>gi|53715107|ref|YP_101099.1| putative N-acetylmuramoyl-L-alanine amidase AmiA [Bacteroides
fragilis YCH46]
gi|60683065|ref|YP_213209.1| putative exported N-acetylmuramoyl-L-alanine amidase [Bacteroides
fragilis NCTC 9343]
gi|52217972|dbj|BAD50565.1| putative N-acetylmuramoyl-L-alanine amidase AmiA [Bacteroides
fragilis YCH46]
gi|60494499|emb|CAH09296.1| putative exported N-acetylmuramoyl-L-alanine amidase [Bacteroides
fragilis NCTC 9343]
Length = 414
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 167/400 (41%), Positives = 225/400 (56%), Gaps = 14/400 (3%)
Query: 3 RKNHTHYLL--LWMTALLLIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINL 60
R+ H Y+L LW LL+ + + F VVIDAGHGGHD GA+G +EK+INL
Sbjct: 4 RRPHILYILICLW----LLVSPSNVSSVWAKDFVVVIDAGHGGHDPGAIGKISKEKNINL 59
Query: 61 AVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGG 120
VAL++G LIK DVKV+YTR KD F+ L RAE AN ADLFISIH N+
Sbjct: 60 KVALKLGNLIKQNCNDVKVVYTRSKDVFIPLDRRAEIANNAKADLFISIHTNALANNRTA 119
Query: 121 YGTETYVMGHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQD 180
G T+ +G ++ N+ V +REN+VIL E DY+T Y GF+P S+ESYI+FE MQ+ Y +
Sbjct: 120 KGASTWTLGLAKSDANLEVAKRENSVILYEDDYKTRYAGFNPNSAESYIIFEFMQDKYME 179
Query: 181 QSIKLAQQIQKGFVAK-GRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEA 239
QS+ LA +QK F R DRGV VL SAMPS+LVELGFIS P E RYL +E
Sbjct: 180 QSVHLASLVQKQFRHHCKRVDRGVHQAGFLVLKASAMPSILVELGFISTPEEERYLNTEE 239
Query: 240 GRDELASAIARGFARYKEDYD-RRSGKVSEPAPQATEEED----KVEVEPEDNGISSVAD 294
G LA I R F YK +++ R +G P E D +++ +N
Sbjct: 240 GSSTLAKGIYRAFLSYKREHEIRLTGSSRTALPNDDEVTDTEVAQIDSTESENKKPQNTP 299
Query: 295 MSDGKESIAPKGHAVKPDEGAHSAKKTYKIQILSSTTKLKNGDKRLKGYK-VVIEQRGGR 353
+D + A + + + ++ T+KIQIL+S+ L DKRLKG K V + G
Sbjct: 300 RTDKLVTEAKTQRPIVVESTTNDSEITFKIQILTSSRPLSKNDKRLKGLKDVDYYKENGL 359
Query: 354 FFYLTGAVSSEDEA-RHLRKKVRKSFPDAYIVVYEAGKRV 392
+ Y GA S ++ R R V F DA+I+ + G+++
Sbjct: 360 YKYTYGASSDYNKVLRTRRNTVTPLFKDAFIIAFRNGEKM 399
>gi|150006672|ref|YP_001301416.1| putative N-acetylmuramoyl-L-alanine amidase amiA [Bacteroides
vulgatus ATCC 8482]
gi|149935096|gb|ABR41794.1| putative N-acetylmuramoyl-L-alanine amidase amiA [Bacteroides
vulgatus ATCC 8482]
Length = 409
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 161/392 (41%), Positives = 235/392 (59%), Gaps = 13/392 (3%)
Query: 9 YLLLWMTALLLIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGR 68
+LL + + CL +G + F VVID GHGGHD GA+G +EK+INL VAL+VG+
Sbjct: 10 FLLCSLWLVFPCFCLAAKG---KDFVVVIDPGHGGHDPGAIGRRGKEKNINLNVALKVGQ 66
Query: 69 LIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVM 128
LI++ DVKV+YTR+ D F+ L RA+ AN ADLFISIH NS RG G ETY +
Sbjct: 67 LIQNNCNDVKVIYTRKTDVFIPLDRRAQIANNAKADLFISIHTNSIARGRTVRGAETYTL 126
Query: 129 GHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQ 188
G R +N+ V ++EN+VIL+E +Y Y GF+P SSESYI+FE +Q+ ++S+KLA
Sbjct: 127 GLHRTEENLEVAKKENSVILIEDNYEQRYAGFNPNSSESYIIFEFVQDKNMEKSVKLATL 186
Query: 189 IQKGF--VAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELAS 246
IQK F AK R D+GV VL ++MPSVLVELG+IS P E +YL S+AG L++
Sbjct: 187 IQKQFKNTAK-RIDKGVHQAGFLVLRATSMPSVLVELGYISTPDEEQYLLSDAGTTALSN 245
Query: 247 AIARGFARYKEDYDRRSG--KVSE---PAPQATEEEDKVEVEPEDNGISSVADMSDGKES 301
+I + F YK ++D G +V E P P+ +E ++E++ + ++ D K+S
Sbjct: 246 SIYKAFLNYKREHDAPIGRSRVQEQELPEPENKPKESRIEIQTAEPDTATEPDKIT-KKS 304
Query: 302 IAPKGHAVKPDEGAHSAKKTYKIQILSSTTKLKNGDKRLKGYKVVIEQR-GGRFFYLTGA 360
+ + D+ SAK +KIQIL S L G K+LKG V R G + Y G
Sbjct: 305 VPATQKKITGDQARTSAKPVFKIQILVSNKILPKGSKQLKGVSPVSYYREKGLYKYTYGE 364
Query: 361 VSSEDEARHLRKKVRKSFPDAYIVVYEAGKRV 392
+ ++ +++ + F DA+I+ ++ G+++
Sbjct: 365 NTDYNKILRMKRNITPKFKDAFIIAFKNGEKM 396
>gi|86132286|ref|ZP_01050881.1| putative N-acetylmuramoyl-L-alanine amidase amiA [Cellulophaga sp.
MED134]
gi|85817205|gb|EAQ38388.1| putative N-acetylmuramoyl-L-alanine amidase amiA [Dokdonia
donghaensis MED134]
Length = 373
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 148/361 (40%), Positives = 199/361 (55%), Gaps = 37/361 (10%)
Query: 30 NRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
++ F VV+DAGHGG DSG GNG EK+I L + L VG ++ K DV+V+YTR+KD F+
Sbjct: 34 SKKFKVVLDAGHGGDDSGNRGNGYYEKNIALDIVLAVGAELE-KQKDVEVIYTRKKDVFI 92
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILM 149
L RA+ AN+ NADLFIS+H NS GTET+VMG ++N KNM + ++ENAVIL+
Sbjct: 93 PLATRADIANEANADLFISVHCNSHSSQ--AKGTETFVMGIDKNEKNMRIAKKENAVILL 150
Query: 150 EKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFV-AKGRHDRGVKLGNL 208
E +Y Y GFDP E+ I ELMQ Y DQS+ LA I+K F A R RGVK G
Sbjct: 151 EDNYEERYAGFDPNKPETMIGLELMQEEYLDQSLNLASFIEKEFTSAVKRSSRGVKQGPF 210
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVSE 268
VL S MPSVLVE GF++N E R+L S AGR ++A AI+ YK+
Sbjct: 211 WVLHRSVMPSVLVETGFLTNNEEGRFLNSNAGRVKMAKAISTAVTNYKK----------- 259
Query: 269 PAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKTYKIQILS 328
A QATE I+ AD + + + + D T+K+Q+ +
Sbjct: 260 -AIQATES------------ITVAADAPVANKPVRVEKSKIYKD-------VTFKVQLAA 299
Query: 329 STTKLKNGDKRLKGYKVVIEQRGGRFF-YLTGAVSSEDEARHLRKKVR-KSFPDAYIVVY 386
S KL+ KG K V + GR + Y A S AR + + K + +A+IV +
Sbjct: 300 SKRKLETKSYNFKGLKNVSRIKDGRLYKYFYEATSDYTLARRFLQDAKAKGYKEAFIVPF 359
Query: 387 E 387
+
Sbjct: 360 D 360
>gi|149372818|ref|ZP_01891839.1| putative exported N-acetylmuramoyl-L-alanine amidase [unidentified
eubacterium SCB49]
gi|149354515|gb|EDM43080.1| putative exported N-acetylmuramoyl-L-alanine amidase [unidentified
eubacterium SCB49]
Length = 380
Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 138/368 (37%), Positives = 199/368 (54%), Gaps = 35/368 (9%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDF 87
+ + F VV+DAGHGGHDSG GNG EKDI L V L+VG++++ PD KV+YTR+ D
Sbjct: 34 EEKKPFIVVLDAGHGGHDSGNRGNGYFEKDIVLDVTLQVGKILEVL-PDFKVIYTRKTDV 92
Query: 88 FVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVI 147
F TL R AN+ +AD+F+SIH N+ G ET+VMG +++ KN+ ++EN VI
Sbjct: 93 FKTLYERGPIANEVDADIFVSIHCNAHHTQ--ANGAETFVMGIDKSGKNLETAKKENEVI 150
Query: 148 LMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGVKLG 206
+E++Y Y GFDP S ES I +MQ Y DQSI LA IQ V R DR VK
Sbjct: 151 FLEENYEESYAGFDPNSPESLIGLTIMQEEYLDQSIMLAGLIQNNIVNNLKRKDRRVKQA 210
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKV 266
VL S MPSVLVELGF+S+ E +Y+ S+ GR E+A IA G YK++ + +
Sbjct: 211 PFWVLHSSYMPSVLVELGFLSHDTEGKYINSKKGRKEMAEQIANGILTYKKNLELATNDF 270
Query: 267 SEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKTYKIQI 326
P + ++ ++V + + D D +K+QI
Sbjct: 271 QNPVITEQDVDEAIKVSEK-----KIYDAID------------------------FKVQI 301
Query: 327 LSSTTKLKNGDKRLKGYKVVIE-QRGGRFFYLTGAVSSEDEARHLRKKVR-KSFPDAYIV 384
+S KL+ + KG K V + GG + Y G S ++ + L+ + + K + +IV
Sbjct: 302 AASGNKLETIPQNFKGLKGVERVKTGGLYKYYYGNTSDYNKIKILQTQAKEKGYTSCFIV 361
Query: 385 VYEAGKRV 392
Y+ GK++
Sbjct: 362 AYKDGKKL 369
>gi|89890701|ref|ZP_01202210.1| N-acetylmuramoyl-L-alanine amidase [Flavobacteria bacterium BBFL7]
gi|89516846|gb|EAS19504.1| N-acetylmuramoyl-L-alanine amidase [Flavobacteria bacterium BBFL7]
Length = 371
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 141/391 (36%), Positives = 205/391 (52%), Gaps = 47/391 (12%)
Query: 15 TALLLIVCL---PLEGQRN----------RAFTVVIDAGHGGHDSGAVGNGLREKDINLA 61
T +LLI+ L P+ Q N + FT+V+DAGHGG D G + EKDI L
Sbjct: 7 TYILLIIALFAFPVVSQANTPIDSTIINSKKFTIVLDAGHGGSDPGKKVGSVNEKDIALK 66
Query: 62 VALRVGRLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGY 121
V ++G L+ +K+PD+KV+YTR D F+ L RA ANK ADLF+S+H N+
Sbjct: 67 VVKKIGALL-NKNPDIKVVYTRTTDKFLELHERASIANKAKADLFVSVHCNAAA-NKSAK 124
Query: 122 GTETYVMGHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQ 181
G ET+V+G RN N+ VVQRENAVIL+E +Y Y GFDP S+ L Q + D
Sbjct: 125 GNETWVLGLHRNDDNLEVVQRENAVILLEDNYEEKYAGFDPNDPSSFAASLLTQEDFLDN 184
Query: 182 SIKLAQQIQKGFVAK-GRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAG 240
SI++A +Q F R +RGVK AVL S MPSVL+E GFI+N E +L S AG
Sbjct: 185 SIEMAANVQTKFEESLKRKNRGVKQAGFAVLRLSYMPSVLIETGFITNTEERNFLNSNAG 244
Query: 241 RDELASAIARGFARYKEDYDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKE 300
+D++A +I + +Y+++ D + EVEP + +G +
Sbjct: 245 QDKVAQSIFKAILKYQKNRDI----------------NNFEVEP--------VHIEEGSD 280
Query: 301 SIAPKGHAVKPDEGAHSAKKTYKIQILSSTTKLKNGDKRLKGYKVVIE-QRGGRFFYLTG 359
S + P + S K Y +QI +S+ ++ + + + GG + Y TG
Sbjct: 281 S-----QVIAPQDQNESIKSVYMVQIAASSNQVAAKSYNFRKLPEISRVKSGGIYRYYTG 335
Query: 360 AVSSEDEARHLRKK-VRKSFPDAYIVVYEAG 389
VS+ + A L+ + V+ + A+IV+ E G
Sbjct: 336 KVSTLESAVELKTRAVKAGYEGAFIVIVENG 366
>gi|146302312|ref|YP_001196903.1| cell wall hydrolase/autolysin [Flavobacterium johnsoniae UW101]
gi|146156730|gb|ABQ07584.1| cell wall hydrolase/autolysin [Flavobacterium johnsoniae UW101]
Length = 373
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 134/369 (36%), Positives = 202/369 (54%), Gaps = 32/369 (8%)
Query: 29 RNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFF 88
++ F V +DAGHG HD GAV +G EK+I LA+ L+VG++++ +P+V V+YTR+ D F
Sbjct: 25 QSNVFKVTLDAGHGDHDFGAVYSGRIEKNIALAIVLKVGKILEL-NPNVNVIYTRKTDVF 83
Query: 89 VTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVIL 148
V L+ RA AN+ N+++F+SIH N+ + GTETYVMG + + N+ ++EN+VI
Sbjct: 84 VDLVERANIANRANSNIFVSIHCNAN-KNTAADGTETYVMGLSKVASNLEAAKKENSVIT 142
Query: 149 MEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRHDR--GVKLG 206
+EKDY+ Y+GFDP S ES I LMQ Y D SI LA +I+ F G+ R GVK
Sbjct: 143 LEKDYKRKYEGFDPNSPESMIGMTLMQEEYLDNSISLATKIEDNFEKLGKKLRQGGVKQA 202
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKV 266
VL + MP VLVE GF+SNP E L SE G+D++A AIA YK +Y G+
Sbjct: 203 PFMVLHKAYMPRVLVETGFVSNPTEGNILNSEEGQDDIAKAIAEAILSYKREYFGSGGES 262
Query: 267 SEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKTYKIQI 326
+ P D +P+ ++V APKG +K+Q+
Sbjct: 263 DDSRPI----RDTTPAKPKTTAPAAVTKN-------APKG-------------TFFKVQL 298
Query: 327 LSSTTKLKNGDKRLKGYK---VVIEQRGGRFFYLTGAVSSEDEARHLRKKVRKSFPDAYI 383
++S K K KG K ++ E ++FY + E ++L + K + +++
Sbjct: 299 IASIKKTPLEPKNFKGLKNVTMLFENNIYKYFYQETS-DYETAKKYLEEAKSKGYGASFL 357
Query: 384 VVYEAGKRV 392
V + G+++
Sbjct: 358 VATKDGEKI 366
>gi|126648188|ref|ZP_01720682.1| putative exported N-acetylmuramoyl-L-alanine amidase [Algoriphagus
sp. PR1]
gi|126575781|gb|EAZ80091.1| putative exported N-acetylmuramoyl-L-alanine amidase [Algoriphagus
sp. PR1]
Length = 237
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 115/229 (50%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
Query: 35 VVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGR 94
+V+DAGHGG D G +G+ +EKDINLAV L VG+ I+ PDV+++YTR+ D F L R
Sbjct: 10 IVLDAGHGGRDPGNLGSRSKEKDINLAVTLLVGKYIEEFLPDVEIIYTRKDDSFPELKER 69
Query: 95 AEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDYR 154
ANKN A LF+SIH NS YGTET+VMG + N +V+REN+VIL+E +Y
Sbjct: 70 PIIANKNKAHLFVSIHSNSAA-NRSAYGTETWVMGMKHFDANFDIVKRENSVILLEDNYE 128
Query: 155 TVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGVKLGNLAVLVF 213
Y+GFDP S ESY+MF LM Y + S+ LA ++ F + GR RGVK G VL
Sbjct: 129 ENYEGFDPSSPESYMMFNLMSKAYFENSVTLAGNVEAQFKDRVGRKSRGVKQGPFYVLWT 188
Query: 214 SAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
+MPSVLVELGF+SN E R+L S+ G++ +ASAI R YKE + R
Sbjct: 189 PSMPSVLVELGFLSNSNEERFLMSKQGQEYMASAIFRSIRDYKESIEAR 237
>gi|91214838|ref|ZP_01251811.1| putative N-acetylmuramoyl-L-alanine amidase amiA [Psychroflexus
torquis ATCC 700755]
gi|91187265|gb|EAS73635.1| putative N-acetylmuramoyl-L-alanine amidase amiA [Psychroflexus
torquis ATCC 700755]
Length = 371
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 115/252 (45%), Positives = 159/252 (63%), Gaps = 3/252 (1%)
Query: 1 MSRKNHTHYLLLWMTALLLIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINL 60
M R N++ LLL+ L+ I + +N+ F V++DAGHGG DSG GN EKDI L
Sbjct: 1 MFRTNYSVQLLLFSFFLVAIPLDSISQSKNKKFVVILDAGHGGKDSGNTGNNYSEKDIAL 60
Query: 61 AVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGG 120
++ L++G+ ++ K+ D++V+YTR+KD F+ L RAE ANK +ADLFISIH N
Sbjct: 61 SIVLKIGKQLE-KYDDLEVIYTRKKDVFIPLDKRAEIANKASADLFISIHCNGVNNSSPS 119
Query: 121 YGTETYVMGHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQD 180
GTET+V+G RN N+ + +EN+VI E +Y Y GFDP S ESYI F +MQ + D
Sbjct: 120 -GTETFVLGLHRNKDNLEIAMKENSVIKFEDNYEVKYDGFDPDSPESYIGFTIMQEEFLD 178
Query: 181 QSIKLAQQIQKGFVAKGR-HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEA 239
QS LA +QK F + + +RGVK VL + MPSVL+E GF++N E +L S +
Sbjct: 179 QSALLADFVQKQFQSTLKMKNRGVKQAGFLVLRETYMPSVLIETGFLTNDTEGAFLNSNS 238
Query: 240 GRDELASAIARG 251
G+D+LA AI G
Sbjct: 239 GQDQLADAIVDG 250
>gi|126663651|ref|ZP_01734647.1| putative N-acetylmuramoyl-L-alanine amidase amiA [Flavobacteria
bacterium BAL38]
gi|126624234|gb|EAZ94926.1| putative N-acetylmuramoyl-L-alanine amidase amiA [Flavobacteria
bacterium BAL38]
Length = 369
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 135/367 (36%), Positives = 200/367 (54%), Gaps = 27/367 (7%)
Query: 29 RNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFF 88
+ + F VV+DAGHGG D GAV +G EK+I L ALRVG +++ K P ++V+YTR+ D F
Sbjct: 20 QTQKFKVVLDAGHGGKDYGAVYHGNIEKNIALQTALRVGAILE-KDPQIEVVYTRKSDVF 78
Query: 89 VTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVIL 148
+ L RA ANK+ +F+S+H N+ + G ETYVMG RN+ N+ V + EN V+
Sbjct: 79 IELQQRATIANKSKGSIFVSMHCNAN-KNQSASGNETYVMGITRNASNLEVAKSENEVVT 137
Query: 149 MEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGVKLGN 207
+E DY+ Y GFDP S ES I ++Q + DQSI+LA ++Q+ F K +RGVK
Sbjct: 138 LETDYKIKYDGFDPNSPESVIGISILQEEHLDQSIELAGRVQQFFTKKTDSKNRGVKQAG 197
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVS 267
VL MP VL+E+GF+SN E +L SE+G+ +LA AIA YK ++
Sbjct: 198 FLVLRQITMPRVLIEMGFVSNKEEGEFLNSESGQAKLAEAIAGSILDYKNEF-------F 250
Query: 268 EPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKTYKIQIL 327
P +ED V P KE I K K ++G +KIQI
Sbjct: 251 NPTNTDNVKEDVKVVAP--------------KEEIVSKETPKKVEKGNEKG-IVFKIQIA 295
Query: 328 SSTTKLKNGDKRLKGYKVVIEQRGGRFF-YLTGAVSSEDEARH-LRKKVRKSFPDAYIVV 385
+ST +L+ KG K + + G + Y + ++ ++A+ L + +K + A+IV
Sbjct: 296 ASTKELQTIPSNFKGLKPISSEFTGSLYKYFYASENNYNDAKQKLEEAKQKGYSTAFIVA 355
Query: 386 YEAGKRV 392
Y+ G ++
Sbjct: 356 YKDGIKI 362
>gi|110637170|ref|YP_677377.1| N-acetylmuramoyl-L-alanine amidase [Cytophaga hutchinsonii ATCC
33406]
gi|110279851|gb|ABG58037.1| N-acetylmuramoyl-L-alanine amidase [Cytophaga hutchinsonii ATCC
33406]
Length = 257
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 117/252 (46%), Positives = 155/252 (61%), Gaps = 3/252 (1%)
Query: 10 LLLWMTALLLIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRL 69
+L +T + L PL + T+VIDAGHGG DSG G E + LAVAL +GR+
Sbjct: 7 ILFLITVVTLSSFSPLGEHSYKVRTIVIDAGHGGKDSGCHGTTGVEAKVTLAVALELGRI 66
Query: 70 IKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMG 129
IK P KV YTR D FV L RA AN+N+ADLFISIH NS GTETYVMG
Sbjct: 67 IKENMPATKVYYTRMSDNFVELHDRAGIANRNHADLFISIHCNSGPSDVK--GTETYVMG 124
Query: 130 HERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI 189
+ N+ V +REN V+L E DY+ Y GFDP+S +++I+F L QN Y + SI++A +I
Sbjct: 125 LHSSEDNLDVAKRENEVVLKESDYKKNYDGFDPKSPQAHILFSLYQNAYIENSIRVASKI 184
Query: 190 QKGFVAK-GRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAI 248
+K F + GR RGVK VL +AMPSVL+ELG+++N +E +YL ++ + LAS I
Sbjct: 185 EKQFSVRLGRTSRGVKQAGFLVLWKTAMPSVLIELGYLTNASEEKYLTNKTNQVYLASGI 244
Query: 249 ARGFARYKEDYD 260
R YK + +
Sbjct: 245 YRAIKEYKAEIE 256
>gi|86133694|ref|ZP_01052276.1| putative exported N-acetylmuramoyl-L-alanine amidase [Tenacibaculum
sp. MED152]
gi|85820557|gb|EAQ41704.1| putative exported N-acetylmuramoyl-L-alanine amidase [Polaribacter
dokdonensis MED152]
Length = 341
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 136/376 (36%), Positives = 200/376 (53%), Gaps = 47/376 (12%)
Query: 20 IVCLPLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKV 79
++ LP+ + +T+V+DAGHGG D G GNG EK+I L VAL VG +K K+ D+KV
Sbjct: 1 MIFLPITTNAQKKYTIVLDAGHGGKDPGNRGNGYYEKNIALKVALLVGDELK-KNKDIKV 59
Query: 80 LYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAV 139
++TR+KD F+ L R + ANK +ADLF+SIH +S +G T+V+G N KN+ +
Sbjct: 60 IFTRKKDVFIDLWKRGDIANKADADLFVSIHCDSYLPRPAAHGAGTFVLGLRGNKKNLEI 119
Query: 140 VQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GR 198
+RENA +L+E++Y YKGFD S ES + F L+Q D+S+++A IQ F + R
Sbjct: 120 AKRENAAVLLEENYEQRYKGFDANSVESVVGFSLLQEENLDKSLEIASLIQNNFTRQLNR 179
Query: 199 HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKED 258
DR VK N VL + MPSVLVELGF++N E R+L S+ G+ ++A ++A+ Y +
Sbjct: 180 LDRKVKQDNFQVLRETVMPSVLVELGFLTNKKEGRFLNSKQGQQKMAKSVAQAIENYVTN 239
Query: 259 YDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSA 318
K++ DNGI VA+ D E
Sbjct: 240 L-----KINTVV---------------DNGI--VAEQKDFVE------------------ 259
Query: 319 KKTYKIQILSSTTKLKNGDKRLKGYKVVIEQRGGRFF-YLTGAVSSEDEARHLRKKVR-K 376
+K+QI S K+ KG K + + G F+ Y G S EA+ K R K
Sbjct: 260 ---FKVQIASGKNKIPTKSYNFKGLKNIQRIKVGAFYKYYYGVTPSYKEAKKSLKVARQK 316
Query: 377 SFPDAYIVVYEAGKRV 392
+ A++V ++ G +V
Sbjct: 317 GYKTAFLVAFKNGTKV 332
>gi|150024845|ref|YP_001295671.1| Probable N-acetylmuramoyl-L-alanine amidase [Flavobacterium
psychrophilum JIP02/86]
gi|149771386|emb|CAL42855.1| Probable N-acetylmuramoyl-L-alanine amidase [Flavobacterium
psychrophilum JIP02/86]
Length = 389
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 132/369 (35%), Positives = 204/369 (55%), Gaps = 14/369 (3%)
Query: 27 GQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
Q N F VV+DAGHG HD GA +G EK+INLA+ L++G++++ P+V+V+YTR D
Sbjct: 24 AQTNYKFKVVLDAGHGNHDFGATYHGFVEKNINLAIVLKLGKILELD-PNVQVIYTRNND 82
Query: 87 FFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAV 146
FV L+ RA AN+ +A+ F+SIH N+ + + YG+ET+VMG +++ ++A+ ++ENAV
Sbjct: 83 TFVDLVERANIANRASANFFVSIHCNAN-KNNDAYGSETFVMGLSKSASSLAIAKKENAV 141
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGVKL 205
I +E +Y+ Y G+DP S ES I + Q Y DQSI+LA +IQ+G K R RGV
Sbjct: 142 ITLEDNYKKKYSGYDPNSPESLISATIAQEEYLDQSIELASKIQEGLENKLNRKSRGVAQ 201
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGK 265
VL + MP VLVE GFISN E YL SE G+ +A IA R K +Y G
Sbjct: 202 APFMVLHKAFMPRVLVETGFISNLDEGTYLNSEEGQQNIAKTIADAVFRMKAEY--FGGT 259
Query: 266 VSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKTYKIQ 325
V + E+ + + P+ D S ++ I + ++K +K+Q
Sbjct: 260 VPVIDIKKYEKPEIKDSTPKVTLPVQAKDTSKEQKKIVDT-------KKIDTSKVIFKVQ 312
Query: 326 ILSSTTKLKNGDKRLKGY-KVVIEQRGGRFFYLTGAVSSEDEAR-HLRKKVRKSFPDAYI 383
+ +S +K++ K G K+ + Y+ G + A+ L + K + A+I
Sbjct: 313 LKASASKIEAKPKNFNGLDKISFVLEKEYYKYMYGETNDYLVAKMQLLEAKTKGYDSAFI 372
Query: 384 VVYEAGKRV 392
VV++ G ++
Sbjct: 373 VVFKNGIKI 381
>gi|120435993|ref|YP_861679.1| N-acetylmuramoyl-L-alanine amidase [Gramella forsetii KT0803]
gi|117578143|emb|CAL66612.1| N-acetylmuramoyl-L-alanine amidase [Gramella forsetii KT0803]
Length = 374
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 129/365 (35%), Positives = 195/365 (53%), Gaps = 40/365 (10%)
Query: 33 FTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
F VV+DAGHGG D G +GNG +EKDI L++ L++G+ ++ K+ VKV+YTR+ D FV L
Sbjct: 34 FVVVLDAGHGGKDPGNMGNGFKEKDIALSIILKIGKSLE-KYDGVKVVYTRKTDVFVELF 92
Query: 93 GRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKD 152
R AN+ NADLF+S+H NS GTET+V+G RN N V ++EN+VI +E++
Sbjct: 93 ERGRIANEANADLFVSVHCNSHNSQ--ASGTETFVLGLNRNETNFEVAKKENSVIYLEEN 150
Query: 153 YRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGVKLGNLAVL 211
Y Y+G+DP S ES+I +MQ Y DQSI LA ++QK F R +RGVK L VL
Sbjct: 151 YEVTYEGYDPNSPESFIGLTIMQEEYLDQSILLADKVQKEFTNDLKRKNRGVKQMGLIVL 210
Query: 212 VFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVSEPAP 271
+ MPSVLVE GF++N E YL S G++++A AI Y +
Sbjct: 211 HQTYMPSVLVETGFLTNNQEGPYLNSRKGQEDMARAITAAIVEYSHTINL---------- 260
Query: 272 QATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKK--TYKIQILSS 329
N + S+A P G D+ + + +++QI +
Sbjct: 261 ---------------NLLESIAKSH-------PVGQLKSTDKPSSKIYEDVIFRVQIAAG 298
Query: 330 TTKLKNGDKRLKGYKVVIEQRGGRFF-YLTGAVSSEDEARHLRKK-VRKSFPDAYIVVYE 387
+ K+ KG K + + G+ F Y G S + +HL ++ ++ + +YIV ++
Sbjct: 299 SKKIDPKPYNFKGLKNIDRTKEGKLFKYYYGETSDYLKIQHLHQEAIKNGYATSYIVAFK 358
Query: 388 AGKRV 392
+++
Sbjct: 359 DEQKI 363
>gi|126663650|ref|ZP_01734646.1| putative exported N-acetylmuramoyl-L-alanine amidase [Flavobacteria
bacterium BAL38]
gi|126624233|gb|EAZ94925.1| putative exported N-acetylmuramoyl-L-alanine amidase [Flavobacteria
bacterium BAL38]
Length = 342
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 129/362 (35%), Positives = 196/362 (54%), Gaps = 28/362 (7%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDF 87
Q + F VV+DAGHGG D G + ++EKDI LAV L++G++++ ++ D+ V+YTR+ D
Sbjct: 4 QNSTKFKVVLDAGHGGKDPGTMRGNIKEKDIALAVVLKIGKILE-QNKDITVIYTRKTDV 62
Query: 88 FVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVI 147
FV L RA ANK A+LFIS+H N + GTET+VMG R N+ + ++EN VI
Sbjct: 63 FVELRERANIANKAKANLFISVHCNGV-KSTAAKGTETFVMGMSRTDTNLDISKKENGVI 121
Query: 148 LMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGVKLG 206
+E++Y YKGFDP + + + +++Q + +QSI+LA I+ FV+K R+ RGVK
Sbjct: 122 FLEENYNEKYKGFDPNNPATLLGLKILQEEFLNQSIELASDIENNFVSKNNRYSRGVKQQ 181
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKV 266
+ VL + MP VL+ELGF+S+P E Y+ SE G++E++S+I+ YK + V
Sbjct: 182 PIWVLDATVMPGVLIELGFVSHPEEGAYISSEGGKEEMSSSISNAIITYKNKF---YNTV 238
Query: 267 SEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKTYKIQI 326
SE Q D SS D + ++S K YK+QI
Sbjct: 239 SEGETQTQTSSDN----------SSTLDNNSNTTE----------SNNSNSNKVYYKVQI 278
Query: 327 LSSTTKLKNGDKRLKGYK-VVIEQRGGRFFYLTGAVSSEDEAR-HLRKKVRKSFPDAYIV 384
+ + K+ KG K + E+ + Y G + D + L + +K F AYIV
Sbjct: 279 CALSKKVATKSSNFKGLKPISFEKEKKIYKYFYGKETDYDTCKIKLEEAKKKGFTTAYIV 338
Query: 385 VY 386
+
Sbjct: 339 KF 340
>gi|83857339|ref|ZP_00950867.1| putative exported N-acetylmuramoyl-L-alanine amidase [Croceibacter
atlanticus HTCC2559]
gi|83848706|gb|EAP86575.1| putative exported N-acetylmuramoyl-L-alanine amidase [Croceibacter
atlanticus HTCC2559]
Length = 370
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 135/368 (36%), Positives = 192/368 (52%), Gaps = 38/368 (10%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDF 87
+++ F VV+DAGHGG D G + N L+EK I L + VG +K +V+++YTRE D
Sbjct: 27 KQSNKFVVVLDAGHGGKDPGKLKNHLKEKTIALIITKLVGNKLKDDK-NVEIIYTRESDK 85
Query: 88 FVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVI 147
FVTL GRA+ AN ADLF+SIH N+ YGTETYV+G RN N+AV EN+VI
Sbjct: 86 FVTLDGRAKIANSAKADLFVSIHCNAHNSQ--AYGTETYVLGLHRNDDNLAVAMAENSVI 143
Query: 148 LMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGVKLG 206
+E+DY Y GFDP+S ESYI LMQ Y DQSI LA ++ F K R RGVK
Sbjct: 144 YLEEDYEVTYDGFDPKSPESYIGLTLMQEEYLDQSILLADNVESQFRDKLKRKSRGVKQA 203
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKV 266
VL + MPSVL+E GFI+N E +L S G++++A+AIA YK +
Sbjct: 204 GFLVLRKTYMPSVLIETGFITNTEEGAFLNSAKGQEKVATAIANAINEYKRTLNL----- 258
Query: 267 SEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKTYKIQI 326
+ V+D + ++++ V D +K+QI
Sbjct: 259 --------------------DVFGGVSDQINTPKTVSQTKEEVYGD-------IVFKVQI 291
Query: 327 LSSTTKLKNGDKRLKGY-KVVIEQRGGRFFYLTGAVSSEDEARHLRKKVR-KSFPDAYIV 384
+S+ KL KG ++ Q G + Y G S + + L K+ + + AY+V
Sbjct: 292 AASSKKLNPDKHDFKGLNQITRNQENGLYKYYFGKTSDYLKIQELVKQAKIVGYEQAYVV 351
Query: 385 VYEAGKRV 392
++ K++
Sbjct: 352 AFKGEKKI 359
>gi|124006547|ref|ZP_01691380.1| N-acetylmuramoyl-L-alanine amidase [Microscilla marina ATCC 23134]
gi|123987960|gb|EAY27640.1| N-acetylmuramoyl-L-alanine amidase [Microscilla marina ATCC 23134]
Length = 275
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 112/232 (48%), Positives = 144/232 (62%), Gaps = 5/232 (2%)
Query: 34 TVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
TVVIDAGHGG D G +G +EK+I L VAL +GR+IK P VKV+YTR D FV L
Sbjct: 42 TVVIDAGHGGKDPGTLGKHTKEKNITLRVALELGRIIKRNLPGVKVVYTRTTDKFVELYR 101
Query: 94 RAEYANKNNADLFISIHVNSQERG----HGGYGTETYVMGHERNSKNMAVVQRENAVILM 149
R E AN+ ADLFISIH N+ R G E YVMG+ + N+A+ +REN+ IL+
Sbjct: 102 RTELANRIKADLFISIHCNAAARKARNRSRAKGAEVYVMGNHVSEDNLAIAKRENSSILL 161
Query: 150 EKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRHD-RGVKLGNL 208
EK+Y+ Y GFDP S +SYI+ + Q + S+ A++I K R RGVK
Sbjct: 162 EKNYQRNYGGFDPNSPQSYILLAMSQQVHMKHSLNFARKIDWEIKNKVRRKTRGVKQAGF 221
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYD 260
VL +AMPSVLVELGF+SNP E R+L G+ +ASAI R F YK++ +
Sbjct: 222 YVLARTAMPSVLVELGFLSNPGEERFLNDALGQIYMASAIFRAFRAYKKELE 273
>gi|88712941|ref|ZP_01107026.1| putative exported N-acetylmuramoyl-L-alanine amidase
[Flavobacteriales bacterium HTCC2170]
gi|88708839|gb|EAR01074.1| putative exported N-acetylmuramoyl-L-alanine amidase
[Flavobacteriales bacterium HTCC2170]
Length = 443
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 135/408 (33%), Positives = 203/408 (49%), Gaps = 46/408 (11%)
Query: 28 QRNRA-FTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
QRN F VV+DAGHGGHD G +GNG EK+I L + L +G+++++ +PD++V+YTR+ D
Sbjct: 28 QRNDGKFVVVLDAGHGGHDPGNLGNGYLEKNIALNIVLNIGKILEA-NPDIEVIYTRKDD 86
Query: 87 FFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAV 146
F+ L R E ANK NADLF+S+H +S G GT +V+G N +N + ++EN+V
Sbjct: 87 TFIDLFVRGEIANKANADLFVSVHCDSHSSDAHGAGT--FVLGLHANKQNFEIAKKENSV 144
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGVKL 205
I +E +Y Y +D S ES I +MQ + DQSI LA+ IQ F K R +R VK
Sbjct: 145 IYLEDNYEDRYADYDINSPESIIGLTIMQEEFLDQSIALAKMIQDNFSGKLKRINRKVKQ 204
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYK--------- 256
VL + MPSVL+E GF++N +E +L S+AG+ ++ AIA YK
Sbjct: 205 AGFIVLHQTFMPSVLIETGFLTNKSEGAFLNSKAGQSQMGKAIAEAILEYKRGVQVNTSA 264
Query: 257 ---EDYDRRSGKVSEPAPQA--TEEED-------------------------KVEVEPED 286
+ + K EP + T+E D K EV+ E
Sbjct: 265 TETQPIAKEVAKTVEPIKEEIITKEVDKPIDDSSASNKIEVKEDVEKPLDIVKTEVKKET 324
Query: 287 NGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKTYKIQILSSTTKLKNGDKRLKGYKVV 346
+ A + E + K K +K+QI++S L+ + G +
Sbjct: 325 DAPVLDAPLKKSTEQKSTNSSIAKSKPKVEGPKVIFKVQIMASAKDLELKPRNFNGLSRI 384
Query: 347 IEQRGGRFF-YLTGAVSSEDEARHLRKKVR-KSFPDAYIVVYEAGKRV 392
++ + Y+ G +S EA L+ K + +YIV Y+ G R+
Sbjct: 385 SQEPFKNLYRYMYGITNSYKEAETLKSNADLKGYSSSYIVAYKEGVRI 432
>gi|88805310|ref|ZP_01120829.1| putative N-acetylmuramoyl-L-alanine amidase amiA [Robiginitalea
biformata HTCC2501]
gi|88784128|gb|EAR15298.1| putative N-acetylmuramoyl-L-alanine amidase amiA [Robiginitalea
biformata HTCC2501]
Length = 452
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 137/413 (33%), Positives = 199/413 (48%), Gaps = 56/413 (13%)
Query: 33 FTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
FTVV+DAGHGGHD G +GNG EK+I L + L VG+ ++ K P+ +V+YTR+ D FV L
Sbjct: 32 FTVVLDAGHGGHDPGNLGNGYLEKNIALNIVLEVGKALE-KEPNTEVIYTRKDDSFVDLY 90
Query: 93 GRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKD 152
R E ANK ADLF+S+H +S G GT +V+G N +N + ++EN+VI +E +
Sbjct: 91 VRGEIANKAKADLFVSVHCDSHTSNAHGAGT--FVLGLHANEQNFEIAKKENSVIYLEDN 148
Query: 153 YRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGVKLGNLAVL 211
Y T Y +D S ES I +MQ + DQSI L + +Q F R+DR VK VL
Sbjct: 149 YETRYAEYDINSPESVIGLTIMQEEFLDQSILLGKLMQDRFTEDLKRNDRKVKQAGFIVL 208
Query: 212 VFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKV----- 266
+ MPSVLVE GF++N E RYL S G+ E+ AIA Y+E V
Sbjct: 209 HQTFMPSVLVETGFLTNKDEGRYLNSPKGQQEMGRAIADAILAYRESLGTEPNPVLPGTG 268
Query: 267 -----------------------SEPAPQATEEEDKVEVEPEDNGISSVADMS------D 297
+PAP + E K + E E VAD D
Sbjct: 269 LPAETSTASSKQPTPTSKPADSGLKPAPTVSPEGGKTDPEEEKADKDPVADSQTTGLPMD 328
Query: 298 GK----------ESIAPKGHAVKPDEGAHSAKK------TYKIQILSSTTKLKNGDKRLK 341
G +++ P G P + A + + +K+Q+++ +
Sbjct: 329 GNGNASEEKTPAQNVEPAGGEPAPGKAATAKDRAEALNINFKVQLVAVSRDPDLNPNNFN 388
Query: 342 GYKVVIEQRGGRFF-YLTGAVSSEDEARHLRKKV-RKSFPDAYIVVYEAGKRV 392
G + ++R + + L G S +A L+ ++ +P AYIV Y G+R+
Sbjct: 389 GLPGLSKERHEKIYRVLYGNTRSYSDAEKLQSIAWQRGYPSAYIVAYRDGERI 441
>gi|88803694|ref|ZP_01119218.1| putative exported N-acetylmuramoyl-L-alanine amidase [Polaribacter
irgensii 23-P]
gi|88780427|gb|EAR11608.1| putative exported N-acetylmuramoyl-L-alanine amidase [Polaribacter
irgensii 23-P]
Length = 363
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 115/271 (42%), Positives = 163/271 (60%), Gaps = 9/271 (3%)
Query: 27 GQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
G + + VV+DAGHGG D G +G+G REK I L V L+VG +K ++ D+KV+YTR+ D
Sbjct: 30 GHAQKQYAVVLDAGHGGSDPGNLGSGFREKSIALQVVLKVGEKLK-QYKDLKVIYTRKTD 88
Query: 87 FFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAV 146
FV L R + AN A LF+SIH +S +G T+V+G N KN+ + +RENAV
Sbjct: 89 VFVDLWKRGDIANHAKAHLFVSIHCDSHTSN--AFGAGTFVLGLRGNKKNLEIAKRENAV 146
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGVKL 205
IL+E ++R YKGFDP S+ES I L+Q D+S+ +A IQ F + R+DR VK
Sbjct: 147 ILLEDNFRDKYKGFDPNSAESVIGLSLLQEENLDKSLAIASLIQSNFTDRLNRNDRKVKQ 206
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRS-- 263
N VL + MPSVL+ELGF++N E R+L S+ G+ ++A+ IA Y ++ +
Sbjct: 207 DNFQVLRETIMPSVLIELGFLTNKKEGRFLNSKNGQLQMANEIADAIYNYIKNIKINTVV 266
Query: 264 -GKVSEPAPQATEEEDKVEVEPEDNGISSVA 293
G V P A E E KV++ N IS+ +
Sbjct: 267 QGDV--PKVAAAEIEFKVQLAAGKNKISTAS 295
>gi|110637572|ref|YP_677779.1| N-acetylmuramoyl-L-alanine amidase I [Cytophaga hutchinsonii ATCC
33406]
gi|110280253|gb|ABG58439.1| N-acetylmuramoyl-L-alanine amidase I [Cytophaga hutchinsonii ATCC
33406]
Length = 265
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 107/223 (47%), Positives = 135/223 (60%), Gaps = 3/223 (1%)
Query: 35 VVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGR 94
+VIDAGHGG D G G REKDI L +AL +G LIK+ PD++V YTR+ D F+ L R
Sbjct: 39 IVIDAGHGGKDPGCNGKYSREKDITLQIALELGELIKTNLPDIEVTYTRKDDRFIELHDR 98
Query: 95 AEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDYR 154
A AN+ +ADLFISIHVN+ GTETY MG + NM V QREN+ ILME + +
Sbjct: 99 AGIANRIDADLFISIHVNAGPEQFA--GTETYCMGLHKTESNMQVAQRENSSILMEANNQ 156
Query: 155 TVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGF-VAKGRHDRGVKLGNLAVLVF 213
Y GFDP ESYIMF L Q+ S+ LA++I++ F R+ RGVK VL
Sbjct: 157 ANYDGFDPNKPESYIMFSLYQSANLSNSMILAERIEEEFKTYNQRYSRGVKQAGFLVLWK 216
Query: 214 SAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYK 256
+ MP+VLVE GF+++ E YL SE G+ A I YK
Sbjct: 217 TTMPAVLVETGFLTHKEEEIYLNSEKGKTHTAYGIYSAIEDYK 259
>gi|149276257|ref|ZP_01882401.1| putative exported N-acetylmuramoyl-L-alanine amidase [Pedobacter
sp. BAL39]
gi|149232777|gb|EDM38152.1| putative exported N-acetylmuramoyl-L-alanine amidase [Pedobacter
sp. BAL39]
Length = 300
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 104/255 (40%), Positives = 148/255 (58%), Gaps = 26/255 (10%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDF 87
Q + T+VIDAGHGG D G EKD+ L ALR+G I++ DVKV+YTR D
Sbjct: 41 QEYKIKTIVIDAGHGGKDGSTRGEYSTEKDVALKTALRLGAAIEANMKDVKVIYTRSTDV 100
Query: 88 FVTLMGRAEYANKNNADLFISIHVNSQ--------------------------ERGHGGY 121
F+ L R AN ADLFISIH N +
Sbjct: 101 FIPLYERIAIANNAKADLFISIHCNDMPLIRSSVVTGYKKVKGKRVPIRSSVYRKSTSTR 160
Query: 122 GTETYVMGHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQ 181
G ET+V G R ++ V++RENA I +E +Y+ Y+GFDP ++E+YI+ LM+NT++ Q
Sbjct: 161 GVETFVSGMGRINEQDEVIKRENAAIFLEDNYKENYEGFDPNNAENYIILSLMKNTFRTQ 220
Query: 182 SIKLAQQIQKGFVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGR 241
S+KLA+ +Q +V GR +RGV+ +LAVL + MP++L E+GFISNPAE Y+ SEAG+
Sbjct: 221 SLKLAKLVQDEYVNVGRVNRGVQEKSLAVLARAGMPAILTEIGFISNPAEEDYMNSEAGQ 280
Query: 242 DELASAIARGFARYK 256
+E+ + + + Y+
Sbjct: 281 EEITNCLLKAIQNYQ 295
>gi|86141376|ref|ZP_01059922.1| putative exported N-acetylmuramoyl-L-alanine amidase
[Flavobacterium sp. MED217]
gi|85831935|gb|EAQ50390.1| putative exported N-acetylmuramoyl-L-alanine amidase
[Leeuwenhoekiella blandensis MED217]
Length = 365
Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats.
Identities = 136/394 (34%), Positives = 195/394 (49%), Gaps = 50/394 (12%)
Query: 4 KNHTHYLLLWMTALLLIVCL----PLEGQRNRAFTVVIDAGHGGHDSGAVGNG-LREKDI 58
+ T Y+L+++ L L P++ +R F VVIDAGHGG D G G + EKDI
Sbjct: 2 RTTTIYILVFLITLPFQRALANLKPVDSKR---FVVVIDAGHGGKDPGKNARGAILEKDI 58
Query: 59 NLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGH 118
L +AL +G ++ K D++++YTR+ D FV L R AN+ ADLFIS+H N+
Sbjct: 59 ALKIALLIGEELQ-KQKDIEIVYTRKTDVFVELDERGAIANRAEADLFISVHCNAHNSQ- 116
Query: 119 GGYGTETYVMGHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTY 178
G ETYV+G RN N V + EN VI +E +Y Y ++ S ES I LMQ +
Sbjct: 117 -ASGAETYVLGLHRNKTNFEVAKAENEVIYLEDNYEEKYAQYNLNSPESLIGLTLMQEEF 175
Query: 179 QDQSIKLAQQIQKGFVAK-GRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGS 237
DQSI+LA +Q F K R DR VK VL + MPS+L+E GFI+N E RYL S
Sbjct: 176 LDQSIQLASYVQDNFRQKLHRKDRSVKQAGFVVLHQTVMPSILIETGFITNTEEGRYLNS 235
Query: 238 EAGRDELASAIARGFARYKEDYDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSD 297
G+ ++A A+A+ +YKE+ + A E D V
Sbjct: 236 SKGQRDIAHAVAQAVVKYKENVTTNDFLGVKKVVPAVEVNDVVV---------------- 279
Query: 298 GKESIAPKGHAVKPDEGAHSAKKTYKIQILSSTTKLKNGDKRLKGYKVVIEQRGGRFF-Y 356
K++I +K+QI +S+ L+ KG + + + G+ + Y
Sbjct: 280 -KDAI-------------------FKVQIAASSRSLETKPYNFKGLRGIQRSKEGKLYKY 319
Query: 357 LTGAVSSEDE-ARHLRKKVRKSFPDAYIVVYEAG 389
G S+ E R LR+ K + AYIV ++ G
Sbjct: 320 YYGDTSNYTEIERMLREAKAKGYTTAYIVAFKNG 353
>gi|149276256|ref|ZP_01882400.1| N-acetylmuramoyl-L-alanine amidase [Pedobacter sp. BAL39]
gi|149232776|gb|EDM38151.1| N-acetylmuramoyl-L-alanine amidase [Pedobacter sp. BAL39]
Length = 280
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 103/248 (41%), Positives = 146/248 (58%), Gaps = 27/248 (10%)
Query: 34 TVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
T+VIDAGHGG GA G +EK++ L VAL++G+ + + P++K+LYTR+ D V
Sbjct: 29 TIVIDAGHGGGKPGAAGTYSKEKNVALQVALKLGKKFEDEMPELKILYTRKTDVDVDFYK 88
Query: 94 RAEYANKNNADLFISIHVNS--QERGHGGY---------------------GTETYVMG- 129
RA+ AN AD+FISIH NS R GY GTET+V G
Sbjct: 89 RADIANDAKADIFISIHCNSMPDRRVVTGYTKTKSGKKVPKYGYVKNSITSGTETFVAGT 148
Query: 130 HERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI 189
H N +++A+ RENA I +EK+Y+ Y G+DP E++I+ L +NT++D+S+KLA I
Sbjct: 149 HRLNEQDVAI--RENADIKLEKNYKQNYDGYDPNDPETFIILSLFKNTFRDKSLKLASLI 206
Query: 190 QKGFV-AKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAI 248
Q + R +RGVK + +L MP+VL E+GFISNP E YL S +G++E+ +AI
Sbjct: 207 QDNYTNVNKRVNRGVKEQGILILQRVGMPAVLTEIGFISNPTEEDYLNSASGQEEIVTAI 266
Query: 249 ARGFARYK 256
YK
Sbjct: 267 FNAVKTYK 274
>gi|119355960|ref|YP_910604.1| N-acetylmuramoyl-L-alanine amidase [Chlorobium phaeobacteroides DSM
266]
gi|119353309|gb|ABL64180.1| N-acetylmuramoyl-L-alanine amidase [Chlorobium phaeobacteroides DSM
266]
Length = 592
Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 95/227 (41%), Positives = 132/227 (58%), Gaps = 6/227 (2%)
Query: 34 TVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
TVV+DAGHGG D GA+G +G EKD+ L + +G +I + PD+KV+YTR D F+ L
Sbjct: 359 TVVLDAGHGGKDPGAIGGHGTMEKDVVLNIVRDLGSIIARQWPDIKVVYTRNSDVFIPLH 418
Query: 93 GRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKD 152
R + AN++ LF+SIH N+ + H G E Y++G R K++ V EN+VI E D
Sbjct: 419 ERGKIANRSGGKLFVSIHCNANSKSH-IRGQEVYILGPHRTQKSLEVAMFENSVITREAD 477
Query: 153 YRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGVKLGNLAVL 211
YR YKGF S+E IM + QN + QS LAQ + K K G RGV VL
Sbjct: 478 YRERYKGF---STEYLIMSSMAQNAFAKQSTTLAQDVLKRIERKGGTTSRGVHQAGFMVL 534
Query: 212 VFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKED 258
+MPS+L+E G++SNP E R L + +A A+ +G RY+ +
Sbjct: 535 WTPSMPSILIETGYLSNPEEERILRERKEQIRIAEAVFQGLDRYRRN 581
>gi|67917998|ref|ZP_00511600.1| N-acetylmuramoyl-L-alanine amidase [Chlorobium limicola DSM 245]
gi|67784294|gb|EAM43671.1| N-acetylmuramoyl-L-alanine amidase [Chlorobium limicola DSM 245]
Length = 607
Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 91/228 (39%), Positives = 133/228 (58%), Gaps = 6/228 (2%)
Query: 35 VVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+V+DAGHGGHD GA+G G REKD+ L + +G LI K PDV+V+YTR+ D F+ L
Sbjct: 375 IVLDAGHGGHDPGAIGGRGTREKDVALNIVRDLGNLITQKWPDVRVIYTRKDDRFIPLHE 434
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R AN+N LF+SIH N+ + H G+E Y++G ++ + V EN+VI E DY
Sbjct: 435 RGRIANRNGGKLFVSIHCNANRKNHIK-GSEVYILGPHKSKDALEVAMFENSVITKEADY 493
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGF-VAKGRHDRGVKLGNLAVLV 212
+ YKGF S+E IM + Q+ + QS LA ++Q + +GV+ VL
Sbjct: 494 KQRYKGF---STEYLIMSSMAQSAFAKQSADLALEVQDRIDRPNSTNGKGVRQAGFMVLW 550
Query: 213 FSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYD 260
+MPS+LVE G++SN E + L + ++A I +G RY+ DY+
Sbjct: 551 TPSMPSILVESGYLSNSEEEKILRDRQEQTKIAYGIFQGLERYRRDYE 598
>gi|78188060|ref|YP_378398.1| Cell wall hydrolase/autolysin [Chlorobium chlorochromatii CaD3]
gi|78170259|gb|ABB27355.1| Cell wall hydrolase/autolysin [Chlorobium chlorochromatii CaD3]
Length = 574
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 96/229 (41%), Positives = 134/229 (58%), Gaps = 6/229 (2%)
Query: 34 TVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
T+V+DAGHGG D GA+G G +EKD+ L + +G I+ + DV+V+YTR D FV L
Sbjct: 342 TIVLDAGHGGKDPGAIGLRGTQEKDVVLNIVRDLGNFIEQQWSDVRVVYTRSNDAFVPLH 401
Query: 93 GRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKD 152
R ANK+ LFIS+H N+ G+E Y++G +NS + V ENAVI E D
Sbjct: 402 ERGRIANKSGGKLFISVHCNASV-NRSARGSEVYILGAHKNSAALNVAMMENAVIRNEVD 460
Query: 153 YRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAVL 211
Y+ YKGF S E IM ++Q+ + QS LAQQI + K ++RGV+ VL
Sbjct: 461 YQESYKGF---SEEYLIMSSMVQSAFSRQSTLLAQQIIRPVAEKQEGNNRGVRQAGFMVL 517
Query: 212 VFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYD 260
+MPS LVE+G+IS+PAE L + +A AI +G RY++ Y+
Sbjct: 518 WTPSMPSALVEVGYISHPAEELLLRDRQRQKAVAYAIFKGIERYRKSYE 566
>gi|67937946|ref|ZP_00530476.1| N-acetylmuramoyl-L-alanine amidase [Chlorobium phaeobacteroides
BS1]
gi|67915807|gb|EAM65125.1| N-acetylmuramoyl-L-alanine amidase [Chlorobium phaeobacteroides
BS1]
Length = 556
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 93/237 (39%), Positives = 138/237 (58%), Gaps = 6/237 (2%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVGNG-LREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
Q+ + T+V+DAGHGG D GAVG G REKDI L + +G +IK + P++KV+YTR D
Sbjct: 312 QKWKFDTIVLDAGHGGKDPGAVGKGGTREKDIVLRIVRYLGAVIKKEWPEIKVVYTRSDD 371
Query: 87 FFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAV 146
F+ L R + AN+++ LF+S+H N+ E G E Y++G +N + V ENA
Sbjct: 372 RFIPLKQRGKIANRSDGKLFVSVHCNAAE-NRSAKGAEVYILGPHKNDAALRVAMLENAA 430
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKL 205
I E+DY+ Y+GF S E IM L QN + QS + A+ + +G K + RGV+
Sbjct: 431 IKQEEDYKNKYRGF---SEEHTIMSSLAQNAFTLQSKEAARHVLEGMEKKTDINGRGVRQ 487
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
VL +MPS+LVE G++SNP E + L + ++A I G RY+ Y+++
Sbjct: 488 AGFMVLWTPSMPSLLVEAGYLSNPGEEKVLRQATVQRDIARGIFNGLKRYRATYEQQ 544
>gi|68552773|ref|ZP_00592159.1| N-acetylmuramoyl-L-alanine amidase [Prosthecochloris aestuarii DSM
271]
gi|68240396|gb|EAN22671.1| N-acetylmuramoyl-L-alanine amidase [Prosthecochloris aestuarii DSM
271]
Length = 584
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 92/246 (37%), Positives = 141/246 (57%), Gaps = 7/246 (2%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
Q+ + T+V+DAGHGG D GAVG G +EKD+ L + +G++++ + PDVKV+YTR D
Sbjct: 341 QKWKFDTIVLDAGHGGRDPGAVGPGGTQEKDVVLNIVKELGQILQKEWPDVKVIYTRTDD 400
Query: 87 FFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAV 146
+ L R + AN+N+A LF+S+H N+ + G E Y++G +N + V ENA
Sbjct: 401 RLIALKQRGKIANQNDAKLFVSVHCNAA-KNRKAEGAEVYILGPHKNDAALEVAMLENAA 459
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKL 205
I E+ Y YKG S E I+ L Q+ + QS +A+ + +G K + RGV+
Sbjct: 460 IKQEEGYEEKYKGV---SEEHMILSSLAQSAFTLQSTTVARHVLEGMEQKTSINGRGVRQ 516
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRS-G 264
VL +MPSVLVE G++SNP E + L + ++A I G RY++ Y+++
Sbjct: 517 AGFMVLWTPSMPSVLVEAGYLSNPKEEKLLRQAGVQRDIARGIYNGLVRYRQHYEQQQLA 576
Query: 265 KVSEPA 270
+ EPA
Sbjct: 577 SMGEPA 582
>gi|21672895|ref|NP_660960.1| N-acetylmuramoyl-L-alanine amidase [Chlorobium tepidum TLS]
gi|21645948|gb|AAM71302.1| N-acetylmuramoyl-L-alanine amidase [Chlorobium tepidum TLS]
Length = 549
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 134/237 (56%), Gaps = 5/237 (2%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
VVIDAGHGG D GA+G G EKD+ L +A +G I+ K PDV+V+YTR++D F+ L
Sbjct: 314 VVIDAGHGGKDPGAIGTQGTHEKDVALNIARDLGMFIRQKWPDVRVIYTRKEDRFIPLKE 373
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R + AN+ +FISIH NS G E Y++G + + V EN+VI E+++
Sbjct: 374 RGQIANRYGGKVFISIHCNSAPNNSKVRGPEVYILGPHKTDAALKVAMFENSVITGEENF 433
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI-QKGFVAKGRHDRGVKLGNLAVLV 212
YKGF S E IM + Q+ + QS +LAQ + Q+ + GV+ VL
Sbjct: 434 AEKYKGF---SDEYLIMSSMAQSAFATQSTELAQDVLQRLSRNNSNNGLGVRQAGFMVLW 490
Query: 213 FSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVSEP 269
+MPS+LVE G++SNP+E + L + ++A AI +G +Y+ Y+ R + P
Sbjct: 491 TPSMPSILVETGYLSNPSEEKLLRDRKEQTKIAYAIFQGLQQYRSRYETRMTTAARP 547
>gi|110597309|ref|ZP_01385597.1| N-acetylmuramoyl-L-alanine amidase [Chlorobium ferrooxidans DSM
13031]
gi|110341145|gb|EAT59613.1| N-acetylmuramoyl-L-alanine amidase [Chlorobium ferrooxidans DSM
13031]
Length = 576
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 93/229 (40%), Positives = 129/229 (56%), Gaps = 6/229 (2%)
Query: 34 TVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
TVV+DAGHGG D GA+G NG REKD+ L + +G I+ PDV V+YTR+ D F+ L
Sbjct: 343 TVVLDAGHGGKDPGAIGGNGTREKDVVLNIVHDLGNFIEQNWPDVNVIYTRKDDTFIPLH 402
Query: 93 GRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKD 152
R + AN+ LFIS+H N+ G+E Y++G + + V EN+VI E D
Sbjct: 403 ERGKIANRAGGKLFISVHCNASP-NRSARGSEVYILGLHKTQAALDVALFENSVIRKEDD 461
Query: 153 YRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA-KGRHDRGVKLGNLAVL 211
Y+ YKGF S E IM + QN + QS LAQ I K G + RGV+ VL
Sbjct: 462 YQLQYKGF---SEEHLIMSSMAQNAFARQSTSLAQDILKPVEKIPGNNGRGVRQAGFMVL 518
Query: 212 VFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYD 260
+MPS LVE+G++SN E R L + ++A I +G Y+++Y+
Sbjct: 519 WTPSMPSALVEVGYLSNYDEERVLRDRQEQAKIAYGIFKGLESYRKNYE 567
>gi|68549352|ref|ZP_00588817.1| N-acetylmuramoyl-L-alanine amidase [Pelodictyon phaeoclathratiforme
BU-1]
gi|68243765|gb|EAN25961.1| N-acetylmuramoyl-L-alanine amidase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 586
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 92/232 (39%), Positives = 130/232 (56%), Gaps = 6/232 (2%)
Query: 34 TVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
T+V+DAGHGG D GA+G NG EK + L + +G I+ PDVKV+YTR++D F+ L
Sbjct: 353 TIVLDAGHGGKDPGAIGANGTVEKHVALNIVRDLGTFIRLNWPDVKVVYTRKEDKFIPLH 412
Query: 93 GRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKD 152
R + AN+N LFIS+H N+ G+E Y++G + ++ V EN+VI E D
Sbjct: 413 ERGKIANQNGGKLFISVHCNASSS-RSARGSEVYILGAHKTRASLDVAMLENSVIRQEAD 471
Query: 153 YRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI-QKGFVAKGRHDRGVKLGNLAVL 211
Y YKGF S E IM + Q+ + QS LAQ I G GV+ VL
Sbjct: 472 YTQAYKGF---SEEYLIMSSMAQSAFARQSTSLAQHILNPGHRLAPDKRNGVRQAGFMVL 528
Query: 212 VFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRS 263
+MPS LVE+G++SNP E R L + ++A AI +G Y+++Y+ S
Sbjct: 529 WTPSMPSALVEVGYLSNPGEERILRDRQEQTKIAYAIFQGLQAYRKNYETSS 580
>gi|78187914|ref|YP_375957.1| N-acetylmuramoyl-L-alanine amidase [Pelodictyon luteolum DSM 273]
gi|78167816|gb|ABB24914.1| N-acetylmuramoyl-L-alanine amidase [Pelodictyon luteolum DSM 273]
Length = 567
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 126/229 (55%), Gaps = 6/229 (2%)
Query: 34 TVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
T+V+DAGHGG D GAVG G REKD+ L + +G +I K PDV+V+YTR+ D F+ L
Sbjct: 335 TIVLDAGHGGQDPGAVGLKGTREKDVALNIVRDLGSIIARKWPDVEVVYTRKDDIFIPLH 394
Query: 93 GRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKD 152
R AN+ LF+S+H N+ E G E Y++G + + + V EN VI E D
Sbjct: 395 ERGRIANRTEGKLFLSVHCNANE-NRSIRGPEVYILGPHKTAAALKVAMLENGVISQESD 453
Query: 153 YRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGF-VAKGRHDRGVKLGNLAVL 211
YR Y+ F S E IM + QN++ S LA+++ K + + R V+ VL
Sbjct: 454 YREQYRNF---SDEHLIMSSMAQNSFIRHSTTLARELVKPLDRSTSTNGRAVRQAGFMVL 510
Query: 212 VFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYD 260
+MPS LVE+G+ISNP E L + ++A I +G Y+ Y+
Sbjct: 511 WTPSMPSALVEVGYISNPREEVILRDRQEQTKIAYGIFQGLQAYRTQYE 559
>gi|83815697|ref|YP_446595.1| N-acetylmuramoyl-L-alanine amidase-like protein [Salinibacter ruber
DSM 13855]
gi|83757091|gb|ABC45204.1| N-acetylmuramoyl-L-alanine amidase-like protein [Salinibacter ruber
DSM 13855]
Length = 428
Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 140/238 (58%), Gaps = 6/238 (2%)
Query: 25 LEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
L +R+R TVVID GHGG D GAV +GL EKDI L VA ++G ++++ +++V+YTR
Sbjct: 190 LSRERSRLDTVVIDPGHGGKDPGAVAHGLYEKDIVLDVAHKLGEYVENRL-NLEVVYTRT 248
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQREN 144
D F+ L R AN+ DLFIS+H N+ + GTETY +G + V+++EN
Sbjct: 249 DDRFIALEERGHLANRRGGDLFISLHANAFQSA-SVQGTETYFLGRSKTDAARRVMKQEN 307
Query: 145 AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGV 203
+V+ ++Y +D +E+++ EL + S + A +Q F + R RGV
Sbjct: 308 SVV---REYEENPDRYDEYDAEAFVKGELFLSASMQFSEEFASIVQNQFKERVQRRSRGV 364
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDR 261
VL ++MPSVLVELG+++N EAR+L S+ G+ LASAI R +YK Y++
Sbjct: 365 HQAGFYVLWSASMPSVLVELGYLTNRQEARFLNSDRGQTYLASAIFRAVRKYKNQYNK 422
>gi|145220516|ref|YP_001131225.1| N-acetylmuramoyl-L-alanine amidase [Prosthecochloris vibrioformis
DSM 265]
gi|145206680|gb|ABP37723.1| N-acetylmuramoyl-L-alanine amidase [Prosthecochloris vibrioformis
DSM 265]
Length = 572
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 126/229 (55%), Gaps = 6/229 (2%)
Query: 34 TVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
T+V+DAGHGG D GAVG G REKD+ L + +G +I K P V+V+YTR+ D F+ L
Sbjct: 339 TIVLDAGHGGKDPGAVGLKGTREKDVVLNIVRDLGSIIARKWPGVRVVYTRKDDRFIPLH 398
Query: 93 GRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKD 152
R + AN LF+SIH N+ + G E Y++G + + V ENAVI E D
Sbjct: 399 ERGKIANHEGGKLFLSIHANANNK-RSIRGAEVYILGPHKTKSALDVAMLENAVISQEVD 457
Query: 153 YRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGF-VAKGRHDRGVKLGNLAVL 211
YKGF + E IM + QN + QS LAQ+I + + + RGV+ VL
Sbjct: 458 SEERYKGF---TQEHLIMSTMAQNAFVRQSTSLAQEILRPIDRSSTINGRGVRQAGFMVL 514
Query: 212 VFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYD 260
+MPS LVE+G+ISN E + L + ++A + +G Y+ +Y+
Sbjct: 515 WTPSMPSALVEVGYISNAQEEKILRDRQEQTKIAYRVFQGLEVYRRNYE 563
>gi|95929134|ref|ZP_01311878.1| N-acetylmuramoyl-L-alanine amidase [Desulfuromonas acetoxidans DSM
684]
gi|95134632|gb|EAT16287.1| N-acetylmuramoyl-L-alanine amidase [Desulfuromonas acetoxidans DSM
684]
Length = 582
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 88/241 (36%), Positives = 132/241 (54%), Gaps = 21/241 (8%)
Query: 35 VVIDAGHGGHDSGAVGNG-LREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+V+DAGHGG D GA+G G L EKD+ L +A + + ++S +VL TR++D ++ L+
Sbjct: 355 IVVDAGHGGKDPGAIGPGKLYEKDVVLKLAKTLAQRLESSF-HCEVLLTRDRDIYIPLLE 413
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R YAN+ +ADLFISIH N+ YG ET+ + + K MAV REN + L E
Sbjct: 414 RTAYANEVDADLFISIHANASV-NKKAYGIETFYLNFSKTDKAMAVAARENGMSLQEV-- 470
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK------GRHDRGVKLGN 207
I+F++M N+ ++S +LA +IQ V + D GV+ G
Sbjct: 471 ----------GDLELILFDMMANSKINESSRLAAEIQSSLVGQLSRKYSNVKDLGVRQGP 520
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVS 267
VL+ + MPSVLVE+ FIS+ EA+ L S R+ A AI G +Y + + + + S
Sbjct: 521 FHVLLGATMPSVLVEVAFISHSREAKRLNSRTYRERSAEAIVHGVRQYLQSQNLLAKRAS 580
Query: 268 E 268
+
Sbjct: 581 D 581
>gi|116623674|ref|YP_825830.1| N-acetylmuramoyl-L-alanine amidase [Solibacter usitatus Ellin6076]
gi|116226836|gb|ABJ85545.1| N-acetylmuramoyl-L-alanine amidase [Solibacter usitatus Ellin6076]
Length = 491
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 88/230 (38%), Positives = 128/230 (55%), Gaps = 21/230 (9%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
VVIDAGHGGHD G G +GL EK++ L VALRVG+LI+ + + +V+YTR D F+ L G
Sbjct: 266 VVIDAGHGGHDQGTQGAHGLIEKELVLDVALRVGKLIEERM-NAEVIYTRSDDTFIPLEG 324
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R AN+ ADLF+SIH NS G ET+ + + + V RENA
Sbjct: 325 RTALANEKKADLFLSIHANSSPYPRIS-GVETFYLNFSDSKDALDVASRENA-----SSQ 378
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA------KGRHDRGVKLGN 207
+++++ D I+ ++ + D+S + A ++Q + G+ +RGVK
Sbjct: 379 KSIFELQD-------IIHKITLHEKLDESREFAGRVQASLFSFSSRNIAGQKNRGVKKAP 431
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKE 257
VL+ + MPSVL E+GF++NP E L R ++A A+ RG ARY E
Sbjct: 432 FVVLIGAQMPSVLAEIGFVTNPREEALLKKSDYRQKVADALYRGVARYAE 481
>gi|78356417|ref|YP_387866.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio desulfuricans
G20]
gi|78218822|gb|ABB38171.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio desulfuricans
G20]
Length = 604
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 128/235 (54%), Gaps = 22/235 (9%)
Query: 34 TVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
T++IDAGHGG D G NG+RE+D L +A +G +K K V+YTR KD FV L
Sbjct: 381 TIMIDAGHGGKDPGTQHNGIRERDYTLKMAKIIGEKLKKK--GFNVVYTRTKDVFVPLEE 438
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R AN ADLF+S+H+N+ R +G ETY + R++ + V RENAV EK
Sbjct: 439 RTAMANVKKADLFLSVHINAN-RSSKIHGFETYYLNLARSASAVRVAARENAV--SEKRI 495
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA--KGRH-----DRGVKLG 206
S +I+ +LM N+ +S LA+ IQ + KG++ D GV+
Sbjct: 496 ----------SDLQFILTDLMLNSKMQESKDLAELIQSNVIGTVKGKYGYPTRDNGVRSA 545
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDR 261
VL+ + MPSVL+ELG+ +N AEAR L S+ + +A I G YK+ +R
Sbjct: 546 PFYVLMGAKMPSVLMELGYCTNDAEARRLKSDNYLNRMADGIVAGVVAYKKKINR 600
>gi|120601940|ref|YP_966340.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio vulgaris subsp.
vulgaris DP4]
gi|120562169|gb|ABM27913.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio vulgaris subsp.
vulgaris DP4]
Length = 568
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 21/229 (9%)
Query: 34 TVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
T++IDAGHGG D GA+ NG+ E+++ LA+A VG +++ KVLYTR++D F+ L
Sbjct: 346 TIMIDAGHGGKDPGAMANGIVEREVTLAMAKLVGERLRAA--GFKVLYTRQRDVFIPLDD 403
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R + AN + ADLF+S+HVN+ G ETY + S V REN+V EK+
Sbjct: 404 RTQMANNSKADLFVSLHVNANTDSSIS-GVETYYLDLASTSSAAKVASRENSV--SEKNL 460
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK------GRHDRGVKLGN 207
S YI+ +LM + +S +A +Q + H GV+
Sbjct: 461 ----------SDLQYILTDLMLSAKTQESRDVAGMVQSSMTKRLASYGGAPHGNGVRSAP 510
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYK 256
VL+ + MP+VLVE+G+ +N AEAR L S R LA AI G RYK
Sbjct: 511 FYVLMGARMPAVLVEVGYCTNKAEARLLASSKYRRALADAIVDGLMRYK 559
>gi|46580776|ref|YP_011584.1| N-acetylmuramoyl-L-alanine amidase, putative [Desulfovibrio
vulgaris subsp. vulgaris str. Hildenborough]
gi|46450196|gb|AAS96844.1| N-acetylmuramoyl-L-alanine amidase, putative [Desulfovibrio
vulgaris subsp. vulgaris str. Hildenborough]
Length = 543
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 21/229 (9%)
Query: 34 TVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
T++IDAGHGG D GA+ NG+ E+++ LA+A VG +++ KVLYTR++D F+ L
Sbjct: 321 TIMIDAGHGGKDPGAMANGIVEREVTLAMAKLVGERLRAA--GFKVLYTRQRDVFIPLDD 378
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R + AN + ADLF+S+HVN+ G ETY + S V REN+V EK+
Sbjct: 379 RTQMANNSKADLFVSLHVNANTDSSIS-GVETYYLDLASTSSAAKVASRENSV--SEKNL 435
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK------GRHDRGVKLGN 207
S YI+ +LM + +S +A +Q + H GV+
Sbjct: 436 ----------SDLQYILTDLMLSAKTQESRDVAGMVQSSMTKRLASYGGAPHGNGVRSAP 485
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYK 256
VL+ + MP+VLVE+G+ +N AEAR L S R LA AI G RYK
Sbjct: 486 FYVLMGARMPAVLVEVGYCTNKAEARLLASSKYRRALADAIVDGLMRYK 534
>gi|78222637|ref|YP_384384.1| Cell wall hydrolase/autolysin [Geobacter metallireducens GS-15]
gi|78193892|gb|ABB31659.1| Cell wall hydrolase/autolysin [Geobacter metallireducens GS-15]
Length = 423
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 86/228 (37%), Positives = 114/228 (50%), Gaps = 21/228 (9%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+V+D GHGGHD GA+G G +EKD+ LA+ L++ I+ + + V+ TR D F+ L
Sbjct: 202 IVVDPGHGGHDPGAIGAGGTQEKDVVLALGLQLAAKIREEL-GIDVVMTRSTDVFIPLEE 260
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R ANK NADLF+S+H N+ G G ETY + + K + REN L
Sbjct: 261 RTAIANKVNADLFVSVHANAS-LNRGTSGIETYYLNLAKTEKAAQLAARENGTSL----- 314
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK------GRHDRGVKLGN 207
D S I+F+LM N + S LA ++QK K G + GVK G
Sbjct: 315 -------DKVSLLQAILFDLMANYKLNDSAHLADEVQKALYKKINGHYPGTRNLGVKQGP 367
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VLV + MPS+LVE FISN E L +A D A I G Y
Sbjct: 368 FYVLVGATMPSILVETAFISNETEEARLRDKAFLDRAADGIVDGIKGY 415
>gi|121540647|ref|ZP_01672407.1| N-acetylmuramoyl-L-alanine amidase [Candidatus Desulfococcus
oleovorans Hxd3]
gi|121519441|gb|EAX56289.1| N-acetylmuramoyl-L-alanine amidase [Candidatus Desulfococcus
oleovorans Hxd3]
Length = 667
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 121/229 (52%), Gaps = 22/229 (9%)
Query: 35 VVIDAGHGGHDSGAVG--NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
+VIDAGHGG D GA G G+ EK + L++A ++ I+ + +V+ TR D F+TL
Sbjct: 438 IVIDAGHGGKDGGAPGYRKGVHEKAVTLSLARKLADQIR-REIGCEVILTRTSDTFLTLE 496
Query: 93 GRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKD 152
R AN NADLFISIH N+ R + YG ETY++ + + M V RENA
Sbjct: 497 ERTAIANTRNADLFISIHTNAC-RSNNAYGIETYILNIATDEEAMEVAARENA------- 548
Query: 153 YRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH------DRGVKLG 206
T K S I+ +LMQNT ++S +LA +Q V + D+GVK
Sbjct: 549 --TSTKNI---SDLQVILQDLMQNTKINESSRLAGFVQGSLVGNLKKSYSRIKDKGVKQA 603
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VL+ + MP+VL+E GFIS+ E L + +D++ I RG Y
Sbjct: 604 PFYVLLGAQMPAVLIETGFISDKTECGRLIDGSYQDKVCEGIVRGIKEY 652
>gi|108757251|ref|YP_632066.1| N-acetylmuramoyl-L-alanine amidase domain protein [Myxococcus
xanthus DK 1622]
gi|29169150|gb|AAO66323.1| N-acetylmuramoyl-L-alanine amidase-like protein [Myxococcus
xanthus]
gi|108461131|gb|ABF86316.1| N-acetylmuramoyl-L-alanine amidase domain protein [Myxococcus
xanthus DK 1622]
Length = 599
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 89/239 (37%), Positives = 130/239 (54%), Gaps = 23/239 (9%)
Query: 35 VVIDAGHGGHDSGAVGNG-LREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
VVID GHGGHD+GA+G G REKD+ L+++L++ ++ K ++V+ TR+ D F+ L
Sbjct: 376 VVIDPGHGGHDTGAIGKGGTREKDVALSISLKLAEELREK--GLEVVLTRDDDRFIRLED 433
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
RA+YAN + DLFIS+H N+ E+ G ETY + + ++ + RENA
Sbjct: 434 RAKYANAEHGDLFISVHCNAAEK-RTLRGIETYTLNTSADRYSIRLAARENA-------- 484
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA------KGRHDRGVKLGN 207
+ KG S +I+ +L ++S +LA Q+Q+ V KG D G K
Sbjct: 485 -SSEKGI---SDLQFILADLATKANTEESTRLATQVQRSLVGGLSRKYKGIRDLGHKEAL 540
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKV 266
VL+ MP++LVE F+SNP E L S + E+A AIA G + D RR KV
Sbjct: 541 FYVLLGVKMPAILVETSFLSNPDEEARLKSNVYQTEVAKAIAHGVEEFLGD-RRRVAKV 598
>gi|77919112|ref|YP_356927.1| N-acetylmuramoyl-L-alanine amidase [Pelobacter carbinolicus DSM
2380]
gi|77545195|gb|ABA88757.1| N-acetylmuramoyl-L-alanine amidase [Pelobacter carbinolicus DSM
2380]
Length = 577
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 88/226 (38%), Positives = 120/226 (53%), Gaps = 21/226 (9%)
Query: 19 LIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDV 77
L V LP + +V+DAGHGG D GA+G +G++EKDI LA+A R+ ++ K
Sbjct: 338 LKVTLPASRVSGKLRRIVVDAGHGGKDPGAIGPSGVKEKDITLALAKRLAVRLE-KELGC 396
Query: 78 KVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNM 137
+V+ TR+KD F+ L R AN+ ADLF+SIH N+ G ETY + +N K
Sbjct: 397 QVILTRDKDVFLPLEERTAIANRVGADLFLSIHANASNN-RKAQGVETYYLNFSKNDKAA 455
Query: 138 AVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK- 196
AV REN L + S I+F+LM N ++S +LA +IQK V
Sbjct: 456 AVAARENGTSLKQV------------SDLELILFDLMANAKINESSRLAAEIQKSLVDNL 503
Query: 197 GRH-----DRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGS 237
+H + GV+ G VL+ + MPSVLVE FISN E L S
Sbjct: 504 SKHYSPVKNHGVRQGPFYVLLGANMPSVLVEAAFISNKTEESRLRS 549
>gi|94968182|ref|YP_590230.1| N-acetylmuramoyl-L-alanine amidase [Acidobacteria bacterium
Ellin345]
gi|94550232|gb|ABF40156.1| N-acetylmuramoyl-L-alanine amidase [Acidobacteria bacterium
Ellin345]
Length = 731
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 133/229 (58%), Gaps = 23/229 (10%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+V+DAGHGGHD+G VG +G EK++ L VALR+G+L++S+ +V+YTR+ D F+ L
Sbjct: 499 IVVDAGHGGHDTGTVGPSGYSEKELVLDVALRLGKLLESRLGS-EVIYTRDDDTFIPLET 557
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R AN++ ADLF+S+H NS R G ETY + + + V RENAV
Sbjct: 558 RTAIANQHEADLFVSVHANSS-RDKSARGVETYYLNFTSDPAALDVAARENAV-----SE 611
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKG-------RHDRGVKLG 206
+++++ D ++ ++ D+S +LA I+ G +A G +RGVK
Sbjct: 612 KSIHELQD-------LVKKITLKEKIDESRELASDIE-GSLATGLSNKSAPMRNRGVKKA 663
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VL+ + MPS+L E+ F+SNPA+ + L + R ++A ++ +G ++Y
Sbjct: 664 PFIVLIGANMPSILAEISFLSNPADEKKLKTPEYRQKIAESLYKGVSKY 712
>gi|115380232|ref|ZP_01467253.1| hypothetical protein STIAU_6617 [Stigmatella aurantiaca DW4/3-1]
gi|115362756|gb|EAU61970.1| hypothetical protein STIAU_6617 [Stigmatella aurantiaca DW4/3-1]
Length = 426
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 90/244 (36%), Positives = 132/244 (54%), Gaps = 27/244 (11%)
Query: 15 TALLLIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSK 73
T L L+ L L+ +R VVID GHGGHD+GA+G+ REKDI LA++L++ ++ +
Sbjct: 188 TELTLVEQLGLKVRR-----VVIDPGHGGHDTGAIGHEHTREKDITLAISLKLAAELRER 242
Query: 74 HPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERN 133
++VL TRE+D +V L RA +AN+ DLFISIH NS G ETY + +
Sbjct: 243 --GLEVLLTREEDRYVRLEDRAAFANEARGDLFISIHCNSAT-NRKLRGVETYTLNLSSD 299
Query: 134 SKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGF 193
++ + RENA + KG S +I+ +L +S +LA Q+QK
Sbjct: 300 RYSIRLAARENA---------STEKGI---SDLQFILADLATKANTGESTRLASQVQKSL 347
Query: 194 VA------KGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASA 247
V KG D G K VL+ + MP++LVE F+S+ E + L S +D +A +
Sbjct: 348 VGQLSKDFKGTRDLGTKEALFYVLLGAKMPAILVETAFLSHAEEEKRLASPEYQDTVAKS 407
Query: 248 IARG 251
IA+G
Sbjct: 408 IAQG 411
>gi|118474687|ref|YP_892367.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter fetus subsp.
fetus 82-40]
gi|118413913|gb|ABK82333.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter fetus subsp.
fetus 82-40]
Length = 469
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 126/234 (53%), Gaps = 22/234 (9%)
Query: 31 RAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R T+V+DAGHGG D+GAVG+ L EK++ L VAL+ G+++K++ KV YTR+KD F+
Sbjct: 244 RNKTIVLDAGHGGKDAGAVGSRTLYEKNVVLKVALKAGKILKNR--GYKVYYTRDKDKFI 301
Query: 90 TLMGRAEYANKNNADLFISIHVNS---QERGHGGYGTETYVMGHERNSKNMAVVQRENAV 146
L R +AN ADLFISIH N+ ++ G ET+ + R+ ++M EN
Sbjct: 302 GLRNRTSFANDKMADLFISIHANAAPNSKKAPEMQGIETFFLSPTRSERSMRAANLENKS 361
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-----HDR 201
E +Y T + + E I S KLA IQ ++ R D
Sbjct: 362 DTDEMNYFTKISFLNFLNREKII-----------ASNKLAIDIQTNLLSSVRTNYNVSDG 410
Query: 202 GVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
GV+ VLV + MP+VL+E G+I++P E + L ++A D+LA IA G Y
Sbjct: 411 GVREAPFWVLVGALMPAVLIETGYITHPKEGKLLANDAYADKLAEGIANGIDDY 464
>gi|114319731|ref|YP_741414.1| N-acetylmuramoyl-L-alanine amidase [Alkalilimnicola ehrlichei
MLHE-1]
gi|114226125|gb|ABI55924.1| N-acetylmuramoyl-L-alanine amidase [Alkalilimnicola ehrlichei
MLHE-1]
Length = 452
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 124/236 (52%), Gaps = 11/236 (4%)
Query: 27 GQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREK 85
G R R V IDAGHGG D GA+G G EKDI L VA R+ RL++ K P ++ L R+
Sbjct: 164 GTRQRDLVVAIDAGHGGVDPGAIGPGGTFEKDIALQVARRLARLLEDK-PGLRPLMIRDG 222
Query: 86 DFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRE 143
D+++ L R A +NNADLF+SIH ++ + G+ YV+ + + A + QRE
Sbjct: 223 DYYMGLRDRTRKARENNADLFVSIHADALD-DRRVRGSSVYVLSEQGATSEAARMLAQRE 281
Query: 144 NAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRG- 202
NA D+ D + ++ +L + + S++L + + R RG
Sbjct: 282 NAA-----DFIGGVSLKDKDDMVASVLVDLSRAATVESSLELGDKALEELGRTNRLLRGR 336
Query: 203 VKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKED 258
V+ AVL MPS+LVELGFISNP E R L + LA A+AR RY ED
Sbjct: 337 VEQAGFAVLKSLDMPSMLVELGFISNPEEERLLRQAEHQQNLARALARSIERYAED 392
>gi|39996920|ref|NP_952871.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Geobacter
sulfurreducens PCA]
gi|39983808|gb|AAR35198.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Geobacter
sulfurreducens PCA]
Length = 419
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 83/228 (36%), Positives = 117/228 (51%), Gaps = 21/228 (9%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+V+D GHGGHD GAVG +G +EK++ LA+ L++ ++ + + V+ TR D F+ L
Sbjct: 201 IVVDPGHGGHDPGAVGAHGTQEKNVVLAIGLKLAEKLRDEL-GIDVVMTRSTDVFIPLEE 259
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R ANK NADLF+SIH N+ G G ETY + + K + REN L
Sbjct: 260 RTAIANKVNADLFVSIHANAS-LNRGASGIETYYLNLAKTEKAAQLAARENGTSL----- 313
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK------GRHDRGVKLGN 207
+ S I+F+LM N + S LA+++QK K + GVK G
Sbjct: 314 -------EKVSLLQAILFDLMANYKLNDSAHLAEEVQKALYRKLHGQYPSTRNLGVKQGP 366
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VLV + MPS+LVE FISN AE L + +++ A I G Y
Sbjct: 367 FYVLVGATMPSILVETAFISNEAEEERLKDSSYQEQAAEGILEGVKGY 414
>gi|15792593|ref|NP_282416.1| putative N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|88596346|ref|ZP_01099583.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|88191187|gb|EAQ95159.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112360587|emb|CAL35384.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni subsp.
jejuni NCTC 11168]
Length = 659
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 24/232 (10%)
Query: 35 VVIDAGHGGHDSGAVGN---GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTL 91
VVIDAGHGG DSGA+ + L+EKDI L+ AL++G +K + KVLYTR D F+ L
Sbjct: 436 VVIDAGHGGKDSGALSDKKGSLKEKDIVLSTALKLGNELKKR--GYKVLYTRSSDKFINL 493
Query: 92 MGRAEYANKNNADLFISIHVNS---QERGHGGYGTETYVMGHERNSKNMAVVQRENAVIL 148
R +YAN ADLFISIH N+ + G ET+ + R+ ++ ++EN
Sbjct: 494 RDRTKYANDKRADLFISIHANAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDF 553
Query: 149 MEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH-----DRGV 203
E +Y F +S +++ E + S KLA +QK + + R D GV
Sbjct: 554 EEINY------FSKQSILNFLNREKIV-----ASNKLAIDVQKNILTQTRKKYKIVDGGV 602
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ VLV + MP++L+E+G+I++P E + + ++A +D L IA G Y
Sbjct: 603 REAPFWVLVGAQMPAILIEIGYITHPNEGKRIANKAFQDLLVKGIADGVESY 654
>gi|57238141|ref|YP_179391.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni RM1221]
gi|57166945|gb|AAW35724.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni RM1221]
Length = 659
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 24/232 (10%)
Query: 35 VVIDAGHGGHDSGAVGN---GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTL 91
VVIDAGHGG DSGA+ + L+EKDI L+ AL++G +K + KVLYTR D F+ L
Sbjct: 436 VVIDAGHGGKDSGALSDKKGSLKEKDIVLSTALKLGNELKKR--GYKVLYTRSSDKFINL 493
Query: 92 MGRAEYANKNNADLFISIHVNS---QERGHGGYGTETYVMGHERNSKNMAVVQRENAVIL 148
R +YAN ADLFISIH N+ + G ET+ + R+ ++ ++EN
Sbjct: 494 RDRTKYANDKRADLFISIHANAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDF 553
Query: 149 MEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH-----DRGV 203
E +Y F +S +++ E + S KLA +QK + + R D GV
Sbjct: 554 EEINY------FSKQSILNFLNREKIV-----ASNKLAIDVQKNILTQTRKKYKIVDGGV 602
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ VLV + MP++L+E+G+I++P E + + ++A +D L IA G Y
Sbjct: 603 REAPFWVLVGAQMPAILIEIGYITHPNEGKRIANKAFQDLLVKGIADGVESY 654
>gi|86150577|ref|ZP_01068800.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|85838928|gb|EAQ56194.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni subsp.
jejuni CF93-6]
Length = 652
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 24/232 (10%)
Query: 35 VVIDAGHGGHDSGAVGN---GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTL 91
VVIDAGHGG DSGA+ + L+EKDI L+ AL++G +K + KVLYTR D F+ L
Sbjct: 429 VVIDAGHGGKDSGALSDKKGSLKEKDIVLSTALKLGNELKKR--GYKVLYTRSSDKFINL 486
Query: 92 MGRAEYANKNNADLFISIHVNS---QERGHGGYGTETYVMGHERNSKNMAVVQRENAVIL 148
R +YAN ADLFISIH N+ + G ET+ + R+ ++ ++EN
Sbjct: 487 RDRTKYANDKRADLFISIHANAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDF 546
Query: 149 MEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH-----DRGV 203
E +Y F +S +++ E + S KLA +QK + + R D GV
Sbjct: 547 EEINY------FSKQSILNFLNREKIV-----ASNKLAIDVQKNILTQTRKKYKIVDGGV 595
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ VLV + MP++L+E+G+I++P E + + ++A +D L IA G Y
Sbjct: 596 REAPFWVLVGAQMPAILIEIGYITHPNEGKRIANKAFQDLLVKGIADGVESY 647
>gi|86152511|ref|ZP_01070716.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|85843396|gb|EAQ60606.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni subsp.
jejuni HB93-13]
Length = 659
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 24/232 (10%)
Query: 35 VVIDAGHGGHDSGAVGN---GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTL 91
VVIDAGHGG DSGA+ + L+EKDI L+ AL++G +K + KVLYTR D F+ L
Sbjct: 436 VVIDAGHGGKDSGALSDKKGSLKEKDIVLSTALKLGNELKKR--GYKVLYTRSSDKFINL 493
Query: 92 MGRAEYANKNNADLFISIHVNS---QERGHGGYGTETYVMGHERNSKNMAVVQRENAVIL 148
R +YAN ADLFISIH N+ + G ET+ + R+ ++ ++EN
Sbjct: 494 RDRTKYANDKRADLFISIHANAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDF 553
Query: 149 MEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH-----DRGV 203
E +Y F +S +++ E + S KLA +QK + + R D GV
Sbjct: 554 EEINY------FSKQSILNFLNREKIV-----ASNKLAIDVQKNILTQTRKKYKIVDGGV 602
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ VLV + MP++L+E+G+I++P E + + ++A +D L IA G Y
Sbjct: 603 REAPFWVLVGAQMPAILIEIGYITHPNEGKRIANKAFQDLLVKGIADGVESY 654
>gi|153951049|ref|YP_001397641.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni subsp.
doylei 269.97]
gi|152938495|gb|ABS43236.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni subsp.
doylei 269.97]
Length = 659
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 24/232 (10%)
Query: 35 VVIDAGHGGHDSGAVGN---GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTL 91
VVIDAGHGG DSGA+ + L+EKDI L+ AL++G +K + KVLYTR D F+ L
Sbjct: 436 VVIDAGHGGKDSGALSDKKGSLKEKDIVLSTALKLGNELKKR--GYKVLYTRSSDKFINL 493
Query: 92 MGRAEYANKNNADLFISIHVNS---QERGHGGYGTETYVMGHERNSKNMAVVQRENAVIL 148
R +YAN ADLFISIH N+ + G ET+ + R+ ++ ++EN
Sbjct: 494 RDRTKYANDKRADLFISIHTNAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDF 553
Query: 149 MEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH-----DRGV 203
E +Y F +S +++ E + S KLA +QK + + R D GV
Sbjct: 554 EEINY------FSKQSILNFLNREKIV-----ASNKLAIDVQKNILTQTRKKYKIVDGGV 602
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ VLV + MP++L+E+G+I++P E + + ++A +D L IA G Y
Sbjct: 603 REAPFWVLVGAQMPAILIEIGYITHPNEGKRISNKAFQDLLVKGIADGVESY 654
>gi|86158119|ref|YP_464904.1| N-acetylmuramoyl-L-alanine amidase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774630|gb|ABC81467.1| N-acetylmuramoyl-L-alanine amidase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 608
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 87/237 (36%), Positives = 122/237 (51%), Gaps = 21/237 (8%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
EG+ +V+DAGHGGHD GA+G +REKD+ LA+A R+ R ++++ +V+ TR
Sbjct: 375 EGELGPIRRIVVDAGHGGHDPGAIGPTRVREKDVTLAIARRLARKLEAE--GFQVVLTRR 432
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQREN 144
D F+ L R AN DLF+S+H N+ R G ETY + + + REN
Sbjct: 433 DDRFLALEERTALANTARGDLFVSVHANAHPR-RVRAGVETYFLNVADDRYAARLAAREN 491
Query: 145 AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR------ 198
+ D S + I+ +L D S +LAQ +Q+ A R
Sbjct: 492 GI-----------DAEDGPSEVARILSDLDAKASADSSRRLAQLVQREVCAGVRSRVGDV 540
Query: 199 HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
D GVK VL+ + MP+VLVE GFISN AE R LGS +DE+AS I R ++
Sbjct: 541 KDLGVKSALFYVLLGARMPAVLVETGFISNRAEERRLGSARYQDEVASGITRAVTQF 597
>gi|50122857|ref|YP_052024.1| N-acetylmuramoyl-L-alanine amidase [Erwinia carotovora subsp.
atroseptica SCRI1043]
gi|49613383|emb|CAG76834.1| N-acetylmuramoyl-L-alanine amidase [Erwinia carotovora subsp.
atroseptica SCRI1043]
Length = 556
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 91/305 (29%), Positives = 151/305 (49%), Gaps = 20/305 (6%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
Q N V IDAGHGG D GA+G NGLREK++ +++A ++ L+ + P K + TR+ D
Sbjct: 178 QSNERIVVAIDAGHGGQDPGAIGTNGLREKNVTISIARKLQTLLNND-PAFKGVLTRDGD 236
Query: 87 FFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRE- 143
+F+++MGR++ A K A+L +SIH ++ G +V+ + R + MA + Q E
Sbjct: 237 YFISVMGRSDVARKQGANLLVSIHADAAP-NRNAKGASVWVLSNRRANSEMANWLEQHEK 295
Query: 144 NAVILMEKDYRTVYKGFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDR 201
+ +L DP S++ + F Q D + K+ +++Q+ G H R
Sbjct: 296 QSELLGGAGDLLANSSADPYLSQAVLDLQFGHSQRVGYDVATKVLRELQR---VGGLHKR 352
Query: 202 GVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDR 261
+ +L VL +PS+LVE GFI+N +E R LGS ++++A+AI +G Y + +
Sbjct: 353 RPEHASLGVLRSPDIPSLLVETGFITNVSEERLLGSNDYQEKIANAIYQGLRGYFQTHPM 412
Query: 262 RSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKT 321
+S E P D +S + ++ K S H V E S +
Sbjct: 413 QSLPKQESRPLQPAANDTA---------ASDSSVTVAKTSAGSSRHTVARGETLSSIARR 463
Query: 322 YKIQI 326
Y + +
Sbjct: 464 YSVSL 468
>gi|121612331|ref|YP_001000945.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni subsp.
jejuni 81-176]
gi|87249917|gb|EAQ72876.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 659
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 24/232 (10%)
Query: 35 VVIDAGHGGHDSGAVGN---GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTL 91
VVIDAGHGG DSGA+ + L+EKDI L+ AL++G +K + KVLYTR D F+ L
Sbjct: 436 VVIDAGHGGKDSGALSDKKGSLKEKDIVLSTALKLGNELKKR--GYKVLYTRSSDKFINL 493
Query: 92 MGRAEYANKNNADLFISIHVNS---QERGHGGYGTETYVMGHERNSKNMAVVQRENAVIL 148
R +YAN ADLFISIH N+ + G ET+ + R+ ++ ++EN
Sbjct: 494 RDRTKYANDKRADLFISIHANAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDF 553
Query: 149 MEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH-----DRGV 203
E +Y F +S +++ E + S KLA +QK + + R D GV
Sbjct: 554 EEINY------FSKQSILNFLNREKIV-----ASNKLAIDVQKNILTQTRKKYKIVDGGV 602
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ VLV + MP++L+E+G+I++P E + + ++A +D L IA G Y
Sbjct: 603 REAPFWVLVGAQMPAILIEIGYITHPNEGKRIANKAFQDLLVKGIADGVESY 654
>gi|86150849|ref|ZP_01069065.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85842019|gb|EAQ59265.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter jejuni subsp.
jejuni 260.94]
Length = 659
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 83/232 (35%), Positives = 126/232 (54%), Gaps = 24/232 (10%)
Query: 35 VVIDAGHGGHDSGAVGN---GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTL 91
+VIDAGHGG DSGA+ + L+EKDI L+ AL++G +K + KVLYTR D F+ L
Sbjct: 436 IVIDAGHGGKDSGALSDKKGSLKEKDIVLSTALKLGNELKKR--GYKVLYTRSSDKFINL 493
Query: 92 MGRAEYANKNNADLFISIHVNS---QERGHGGYGTETYVMGHERNSKNMAVVQRENAVIL 148
R +YAN ADLFISIH N+ + G ET+ + R+ ++ ++EN
Sbjct: 494 RDRTKYANDKRADLFISIHANAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDF 553
Query: 149 MEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH-----DRGV 203
E +Y F +S +++ E + S KLA +QK + + R D GV
Sbjct: 554 EEINY------FSKQSILNFLNREKIV-----ASNKLAIDVQKNILTQTRKKYKIVDGGV 602
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ VLV + MP++L+E+G+I++P E + + ++A +D L IA G Y
Sbjct: 603 REAPFWVLVGAQMPAILIEIGYITHPNEGKRIANKAFQDLLVKGIADGVESY 654
>gi|152993325|ref|YP_001359046.1| N-acetylmuramoyl-L-alanine amidase [Sulfurovum sp. NBC37-1]
gi|151425186|dbj|BAF72689.1| N-acetylmuramoyl-L-alanine amidase [Sulfurovum sp. NBC37-1]
Length = 410
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 128/232 (55%), Gaps = 19/232 (8%)
Query: 35 VVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGR 94
+VIDAGHGGHD+GA+ REKD+ L +A R+ R +K + V + TR D F+ L R
Sbjct: 182 IVIDAGHGGHDTGAIAGSKREKDLVLQIAKRLERQLKKRGYAVSM--TRRNDRFIKLKQR 239
Query: 95 AEYANKNNADLFISIHVNS--QERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKD 152
+ A++ +A +F+SIH NS + + + +G ET+ + R++K+ + REN +L
Sbjct: 240 TKIADRKDAKVFVSIHANSVPKRKRNKVHGVETFFLQTTRDAKSQRIAARENKAVL---- 295
Query: 153 YRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA------KGRHDRGVKLG 206
KG + S+ I+ ++ QS KLA +Q+ + +G D GV+
Sbjct: 296 -----KGAGDKLSKHVIIDSVLNGPKIVQSNKLAIDVQRRIITNLRANYRGVKDGGVRYA 350
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKED 258
VLV ++ PS+LVE+G+ISNP E + L + ++ +A IA G Y ++
Sbjct: 351 PFWVLVGASRPSILVEVGYISNPRERKRLFTPKYQELIAKGIAEGINNYLDN 402
>gi|57167619|ref|ZP_00366759.1| N-acetylmuramoyl-L-alanine amidase (amiA) [Campylobacter coli
RM2228]
gi|57020741|gb|EAL57405.1| N-acetylmuramoyl-L-alanine amidase (amiA) [Campylobacter coli
RM2228]
Length = 656
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 126/232 (54%), Gaps = 24/232 (10%)
Query: 35 VVIDAGHGGHDSGAVGN---GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTL 91
+V+DAGHGG DSGA+ + L+EKDI L+ L++G +K + KVLYTR D F+ L
Sbjct: 433 IVLDAGHGGKDSGALSDKKGSLKEKDIVLSTTLKLGNELKKR--GYKVLYTRSSDKFINL 490
Query: 92 MGRAEYANKNNADLFISIHVN---SQERGHGGYGTETYVMGHERNSKNMAVVQRENAVIL 148
R +YAN ADLF+SIH N S + G ET+ + R+ ++ ++EN
Sbjct: 491 RDRTKYANDKRADLFLSIHANAAPSASKAKSSEGVETFFLSPARSERSKKAAEKENQGDF 550
Query: 149 MEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH-----DRGV 203
E +Y F +S +++ E + S KLA +QK + + R D GV
Sbjct: 551 EEINY------FSKQSILNFLNREKIV-----ASNKLAIDVQKNILTQTRKKYKIVDGGV 599
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ VLV + MP++L+E+G+I++P+E + + +++ +D L IA G Y
Sbjct: 600 REAPFWVLVGAQMPAILIEIGYITHPSEGKRIANKSFQDTLVKGIADGVENY 651
>gi|152990510|ref|YP_001356232.1| N-acetylmuramoyl-L-alanine amidase [Nitratiruptor sp. SB155-2]
gi|151422371|dbj|BAF69875.1| N-acetylmuramoyl-L-alanine amidase [Nitratiruptor sp. SB155-2]
Length = 448
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 132/242 (54%), Gaps = 22/242 (9%)
Query: 29 RNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDF 87
+N ++T+VID GHGG DSGA+G +EKDI L++A +V + +K+ KV TR D+
Sbjct: 220 KNSSYTIVIDPGHGGKDSGAIGYKRKKEKDIVLSIAKKVYKSLKNA--GYKVYLTRRGDY 277
Query: 88 FVTLMGRAEYANKNNADLFISIHVNS---QERGHGGYGTETYVMGHERNSKNMAVVQREN 144
F++L R ++ANK +A+LFISIH N+ + R +G ET+ + R+S+ + EN
Sbjct: 278 FISLRNRTKFANKVHANLFISIHANAAPKRSRYLTMHGLETFYLSPARSSRAKRIAALEN 337
Query: 145 AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-----H 199
V + +Y + D + E I+ S KLA IQK + R
Sbjct: 338 RVDMQGMNYYSKNVYLDFLNREKTIL-----------SNKLAIDIQKNILYHLRKRYKVK 386
Query: 200 DRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDY 259
D GV+ G VLV + MPS+L+E+G+I+NP EA L + + +A + G Y ++
Sbjct: 387 DGGVRPGPFWVLVGAQMPSILIEVGYITNPTEAMRLSNPIYQKLIAKGVVEGVESYLKNI 446
Query: 260 DR 261
++
Sbjct: 447 EK 448
>gi|116748175|ref|YP_844862.1| N-acetylmuramoyl-L-alanine amidase [Syntrophobacter fumaroxidans
MPOB]
gi|116697239|gb|ABK16427.1| N-acetylmuramoyl-L-alanine amidase [Syntrophobacter fumaroxidans
MPOB]
Length = 484
Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 87/228 (38%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+VID GHGG D GA G NG+ EKD+ LA+A + + I K +V+ TR D F++L
Sbjct: 257 IVIDPGHGGKDKGASGPNGMHEKDLTLAIARELKKAIGRK-TGCEVILTRTDDRFMSLED 315
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R +ANK+ ADLFISIH N+ E GTETY + ++ ++ V ENA +
Sbjct: 316 RTAFANKHKADLFISIHANAHE-DKTRRGTETYFLNLAKDKESARVAALENAASQKKM-- 372
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR------HDRGVKLGN 207
S I+ ELM+NT +S +LA+ +Q V K R D G K
Sbjct: 373 ----------SDLEGILRELMRNTKISESSRLARDVQANIVHKVRPQYRELRDLGTKQAP 422
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VLV + MPS+LVE FI+N AE R L ++ + +A+ I+ G Y
Sbjct: 423 FFVLVGAEMPSILVETAFITNDAEERLLKDKSFQRSVAAGISGGIESY 470
>gi|16079475|ref|NP_390299.1| hypothetical protein BSU24190 [Bacillus subtilis subsp. subtilis
str. 168]
gi|7531286|sp|P54525|YQII_BACSU Uncharacterized protein yqiI
gi|2634853|emb|CAB14350.1| yqiI [Bacillus subtilis subsp. subtilis str. 168]
Length = 206
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 90/233 (38%), Positives = 114/233 (48%), Gaps = 56/233 (24%)
Query: 24 PLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTR 83
P+EG+ TV IDAGHGG DSGAVGNGL EKDINL V+ V K K + +R
Sbjct: 26 PIEGK-----TVYIDAGHGGEDSGAVGNGLFEKDINLPVSEHVTD--KLKEEGANPVASR 78
Query: 84 EKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRE 143
D F+TL R A+ N ADLF+SIHVNS GTETY
Sbjct: 79 SDDHFLTLEERVAKASANQADLFVSIHVNSGVA--SASGTETY----------------- 119
Query: 144 NAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRG 202
+++ Y+G + R +LA IQ V+ + DRG
Sbjct: 120 ---------FQSDYEGENSR--------------------RLASDIQSQLVSSLQTRDRG 150
Query: 203 VKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VK + V+ +S MPSVL ELGFI+N ++A LGSE + + A AI G Y
Sbjct: 151 VKESDFYVITYSQMPSVLAELGFITNSSDADKLGSEEYQQKAADAIVNGIDSY 203
>gi|119897534|ref|YP_932747.1| conserved hypothetical N-acetylmuramoyl-L-alanine amidase [Azoarcus
sp. BH72]
gi|119669947|emb|CAL93860.1| conserved hypothetical N-acetylmuramoyl-L-alanine amidase [Azoarcus
sp. BH72]
Length = 461
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/234 (36%), Positives = 125/234 (53%), Gaps = 13/234 (5%)
Query: 30 NRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFF 88
NR FTVV+D GHGG D GAVG G EK++ L++ R+ R I + P+++ + TR+ DFF
Sbjct: 223 NRLFTVVLDPGHGGEDPGAVGRAGSYEKNVTLSIGRRLKRKIDAD-PNMRAVLTRDDDFF 281
Query: 89 VTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAV 146
V L R A K ADLF+SIH ++ R G+ +V+ S + A + Q+EN
Sbjct: 282 VPLAQRVTRARKVQADLFVSIHADAFVRPEA-RGSSVFVLSESGASSSAARWLAQKENDA 340
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI--QKGFVAKGRHDRGVK 204
L+ G R+ + +L Q + S+KL + + + G + H V+
Sbjct: 341 DLIGGVNLAKQDGHLART-----LLDLSQTATINDSLKLGKAVLSELGDI-NTLHKAHVE 394
Query: 205 LGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKED 258
AVL +PS+LVE FISNP E R L +A +D++A AI RG RY E+
Sbjct: 395 QAGFAVLKAPDIPSILVETAFISNPEEERRLNDDAYQDKMADAILRGIKRYFEE 448
>gi|157085067|gb|ABV14745.1| hypothetical protein CKO_03666 [Citrobacter koseri ATCC BAA-895]
Length = 443
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 82/246 (33%), Positives = 129/246 (52%), Gaps = 11/246 (4%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 193 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNNDPMFKGVLTRDGDYFISVMG 251
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQREN---AVILME 150
R++ A K NA+ +SIH ++ G +V+ + R + MA E+ + +L
Sbjct: 252 RSDVARKQNANFLVSIHADAAP-NRNATGASVWVLSNRRANSEMANWLEEHEKQSELLGG 310
Query: 151 KDYRTVYKGFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
DP S++ + F Q D + + Q+Q+ H R + +L
Sbjct: 311 AGDVLANSQADPYLSQAVLDLQFGHSQRVGYDVATNMLGQLQR---IGSLHKRRPEHASL 367
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVSE 268
VL +PSVLVE GFISN E R L S+A + +LA AI +G Y + + +SG S
Sbjct: 368 GVLRSPDIPSVLVETGFISNSGEERLLASDAYQQQLAEAIYQGLRNYFQAHPVQSGPQSA 427
Query: 269 PAPQAT 274
PA A+
Sbjct: 428 PAQTAS 433
>gi|118070257|ref|ZP_01538490.1| cell wall hydrolase/autolysin [Serratia proteamaculans 568]
gi|118015540|gb|EAV29479.1| cell wall hydrolase/autolysin [Serratia proteamaculans 568]
Length = 597
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 81/227 (35%), Positives = 123/227 (54%), Gaps = 11/227 (4%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D GA+G NGL+EK++ +A+A R+ L+ + P K + TR D+F+++MG
Sbjct: 214 VAIDAGHGGQDPGAIGPNGLKEKNVTIAIARRLQALLDAD-PQFKPVLTRNGDYFISVMG 272
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K A++ ISIH ++ G +V+ + R + MA + Q E L+
Sbjct: 273 RSDVARKQGANVLISIHADAAP-NRSANGASVWVLSNRRANSEMAGWLEQHEKQSELLGG 331
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D ++K+ QQ+Q H R + +L
Sbjct: 332 AGDLLANSQADPYLSQAVLDLQFGHSQRVGYDVAVKVLQQLQS---VGSLHKRRPEHASL 388
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VL +PS+LVE GFISN E R LGS A ++++A AI G Y
Sbjct: 389 GVLRSPDIPSLLVETGFISNSTEERLLGSSAYQEKIARAIHNGLRSY 435
>gi|138896739|ref|YP_001127192.1| Surface-layer N-acetylmuramoyl-L-alanine amidase, pXO2-42
[Geobacillus thermodenitrificans NG80-2]
gi|134268252|gb|ABO68447.1| Surface-layer N-acetylmuramoyl-L-alanine amidase, pXO2-42
[Geobacillus thermodenitrificans NG80-2]
Length = 420
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 84/223 (37%), Positives = 109/223 (48%), Gaps = 49/223 (21%)
Query: 34 TVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
T++ID GHGG+D GA NGL EK+INL VAL+V L + ++ + TREKD F+ L
Sbjct: 229 TIIIDPGHGGNDPGATANGLVEKNINLNVALKVKSLFEGTGFNIAL--TREKDVFIPLSE 286
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R +A + ++F+SIH N+ GG GTETY
Sbjct: 287 RVSFAKEKGGNVFVSIHTNAG----GGTGTETYYYS------------------------ 318
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH-DRGVKLGNLAVLV 212
N Y +QS KLAQ IQK VA DRG K GNL VL
Sbjct: 319 ------------------AAATNPYVEQSKKLAQCIQKRLVAAWDAVDRGTKRGNLHVLR 360
Query: 213 FSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
++MP+ LVELGFI +A+ LGS +++ A AI G Y
Sbjct: 361 ENSMPAALVELGFIDRKEDAQKLGSSYWQEQAAKAIYLGILDY 403
>gi|37528403|ref|NP_931748.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36787841|emb|CAE16956.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 419
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 81/235 (34%), Positives = 131/235 (55%), Gaps = 15/235 (6%)
Query: 27 GQRNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREK 85
GQR V IDAGHGG D GA+G GL+EK++ ++VA ++ L+++ P K + TR
Sbjct: 179 GQR---VVVAIDAGHGGQDPGAIGQRGLKEKNVTISVARKLEVLLRND-PMFKPVLTRNG 234
Query: 86 DFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRE 143
D+F+++ GR+E A K++A++ ISIH ++ G +V+ ++R + + + Q E
Sbjct: 235 DYFISVAGRSEVARKHSANMLISIHADAAP-NRSARGASVWVLSNKRANSELGNWLEQHE 293
Query: 144 NAVILMEKDYRTVYKGFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHD 200
L+ + G DP S++ + F Q + ++++ +++K G + H
Sbjct: 294 KQSELLGGAGNALANGADPYLSQAVLDLQFGHSQRVGYNVAVQVLSELRKVGLL----HK 349
Query: 201 RGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
R + +L VL +PS+LVE GFISN AE LGS +D+LASAI RG Y
Sbjct: 350 RSPEHASLGVLRSPDIPSILVETGFISNSAEEALLGSNDFQDKLASAIHRGLRNY 404
>gi|114331871|ref|YP_748093.1| N-acetylmuramoyl-L-alanine amidase [Nitrosomonas eutropha C91]
gi|114308885|gb|ABI60128.1| N-acetylmuramoyl-L-alanine amidase [Nitrosomonas eutropha C91]
Length = 435
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 83/258 (32%), Positives = 134/258 (51%), Gaps = 19/258 (7%)
Query: 6 HTHYLLLWMTALLLIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVAL 64
H+H + T+ ++ + ++NR T+ IDAGHGG D GA+G G EK+I L++A
Sbjct: 173 HSHNVTPAATSKTVLTATSRKPEKNRIITIAIDAGHGGKDPGAIGPQGSMEKNITLSIAR 232
Query: 65 RVGRLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTE 124
++ I K P ++ + R+ D+F++L R A + NADLF+SIH ++ R +G
Sbjct: 233 KLKARI-DKEPGMRSVLIRDGDYFISLAERRIKARQANADLFVSIHADAAPR-REAHGAS 290
Query: 125 TYVMGHERNSKNMA--VVQRENAVILMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQ 179
Y + + A + ++ENAV L+ G + + Y+ + +L N
Sbjct: 291 IYALSENGATSTTASWLAKKENAVDLI--------GGVKLDNKDRYLKQTLIDLSMNATI 342
Query: 180 DQSIKLAQQI--QKGFVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGS 237
+ SI+LA + + G ++ H + V+ AVL +PSVLVE FISN E L S
Sbjct: 343 NDSIRLANHVLNEIGTISH-LHKKNVEQAGFAVLKSPDIPSVLVETAFISNQTEEAKLNS 401
Query: 238 EAGRDELASAIARGFARY 255
E +++L AI+ G RY
Sbjct: 402 EIHQNKLVDAISVGLKRY 419
>gi|149927688|ref|ZP_01915940.1| N-Acetylmuramoyl-L-alanine amidase [Limnobacter sp. MED105]
gi|149823514|gb|EDM82744.1| N-Acetylmuramoyl-L-alanine amidase [Limnobacter sp. MED105]
Length = 448
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 118/229 (51%), Gaps = 11/229 (4%)
Query: 31 RAFTVVIDAGHGGHDSGAVGNG-LREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R TV ID GHGG D GAVG G EK++ LA++ ++ I K P ++ + TR DFFV
Sbjct: 214 RIITVAIDPGHGGEDPGAVGKGGTYEKNVVLAISKKLKAEI-DKMPGMRAMLTRNGDFFV 272
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVI 147
L R + A NADLF+S+H ++ R G G+ YV+ S A + +ENA
Sbjct: 273 PLNTRVQKARSVNADLFVSVHADAFIRPTAG-GSSVYVLSERGASSTAAKWIANKENASD 331
Query: 148 LMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLG 206
L+ KG D S + ++ +L + S+KL + R H V+
Sbjct: 332 LIGG---VNIKGTD--SQLARVLLDLSTTAQINDSLKLGDAVLGNLGKVNRLHKPRVEQA 386
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
AVL +PS+L+E FISNP E + L + A + ELA AIA+G A Y
Sbjct: 387 GFAVLKAPDIPSILIETAFISNPDEEKKLANPAHQQELAEAIAKGIANY 435
>gi|118745452|ref|ZP_01593426.1| N-acetylmuramoyl-L-alanine amidase [Geobacter lovleyi SZ]
gi|118681643|gb|EAV88067.1| N-acetylmuramoyl-L-alanine amidase [Geobacter lovleyi SZ]
Length = 427
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 118/228 (51%), Gaps = 21/228 (9%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+V+D GHGGHD GAVG +GL+EKD+ L++ L++ ++ + + V+ TR D F+ L
Sbjct: 209 IVVDPGHGGHDPGAVGQSGLQEKDVVLSIGLKLREKLREEL-GLDVVMTRSTDIFIPLEE 267
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R ANK NADLF+SIH N+ + G ETY + + K + +EN L
Sbjct: 268 RTAIANKVNADLFVSIHANAAPNRNA-AGIETYYLNLAKTEKVAQLAAKENGTSL----- 321
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR------HDRGVKLGN 207
+ S+ I+F+LM N + S LA+++QK R + GVK G
Sbjct: 322 -------EKVSTLQAILFDLMANYKLNDSAHLAEEVQKALYKTSRSKYPDTKNLGVKQGP 374
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VLV ++MPS+L E+ FISN E +L + D A I G Y
Sbjct: 375 FYVLVGASMPSILTEVAFISNSTEESHLKDPSFHDLAADGILDGIRGY 422
>gi|57505450|ref|ZP_00371378.1| N-acetylmuramoyl-L-alanine amidase (amiA) [Campylobacter
upsaliensis RM3195]
gi|57016275|gb|EAL53061.1| N-acetylmuramoyl-L-alanine amidase (amiA) [Campylobacter
upsaliensis RM3195]
Length = 627
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 125/231 (54%), Gaps = 23/231 (9%)
Query: 35 VVIDAGHGGHDSGAVGNG--LREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
+V+DAGHGG DSGA+ L+EKDI L+ L++G +K + KV YTR D F+ L
Sbjct: 405 IVLDAGHGGKDSGALSKNKHLKEKDIVLSTTLKIGNELKKR--GFKVYYTRTTDKFINLR 462
Query: 93 GRAEYANKNNADLFISIHVNS---QERGHGGYGTETYVMGHERNSKNMAVVQRENAVILM 149
R + AN ADLF+SIH N+ + G ET+ + R+ ++ ++EN
Sbjct: 463 DRTKIANDRKADLFLSIHANAAPNTSKAKSSEGLETFFLSPARSERSKKAAEKENQGDFE 522
Query: 150 EKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH-----DRGVK 204
E +Y F +S +++ E + S KLA IQKG +AK R D GV+
Sbjct: 523 EMNY------FSKQSILNFLNREKIV-----ASNKLAIDIQKGVLAKTRTRYKVVDGGVR 571
Query: 205 LGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VLV ++MP++L+E+G+I++P+E + ++ +D LA IA G Y
Sbjct: 572 EAPFWVLVGASMPAILLEIGYITHPSEGERIANKNFQDLLAKGIADGVENY 622
>gi|30248667|ref|NP_840737.1| Cell wall hydrolase/autolysin [Nitrosomonas europaea ATCC 19718]
gi|30180262|emb|CAD84567.1| Cell wall hydrolase/autolysin [Nitrosomonas europaea ATCC 19718]
Length = 436
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 118/232 (50%), Gaps = 17/232 (7%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R F V IDAGHGG D GAVG G EK+I L++A ++ I + P ++ + R+ D F+
Sbjct: 199 RTFVVAIDAGHGGKDPGAVGPQGTMEKNITLSIAKKLKARI-DREPGMRAVLVRDGDHFI 257
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVI 147
+L GR A + NADLF+SIH ++ R +G Y + + A + ++EN V
Sbjct: 258 SLAGRRIKARQANADLFVSIHADAAPR-REAHGASVYALSENGATSTTASWLAKKENEVD 316
Query: 148 LMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGV 203
L+ G + Y+ + +L N D S++LA + + H R V
Sbjct: 317 LL--------GGVKLDDKDRYLKQTLIDLSMNATIDDSVRLASHVLNEIGSVNHLHKRNV 368
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ AVL +PS+LVE FISN E L SEA +++L AI+ G RY
Sbjct: 369 EQAGFAVLKSPDIPSILVETAFISNHTEEARLNSEAYQNKLVDAISAGLKRY 420
>gi|109673042|ref|ZP_01375275.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter concisus 13826]
gi|112801964|gb|EAT99308.1| transcription elongation factor GreA (Transcript cleavage
factorgreA) [Campylobacter concisus 13826]
Length = 479
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 120/237 (50%), Gaps = 21/237 (8%)
Query: 27 GQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
G+ +R T+VID GHGG D GAV L+EK L VA ++G ++KS+ KV +TR D
Sbjct: 251 GKFSRNKTIVIDPGHGGTDPGAVNGSLKEKTAVLGVAKKLGEILKSR--GYKVYFTRSTD 308
Query: 87 FFVTLMGRAEYANKNNADLFISIH---VNSQERGHGGYGTETYVMGHERNSKNMAVVQRE 143
F+ L R ++AN ADLF+SIH + + +G ET+ + R+ ++ E
Sbjct: 309 VFINLRSRTKFANDKMADLFVSIHANAAPNAAKAKSMHGIETFFLSPARSERSKNAAALE 368
Query: 144 NAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH---- 199
N + E +Y + + + E I S KL IQK +A R
Sbjct: 369 NKSDIEEMNYFSQQTFLNVLNREKII-----------ASNKLGIDIQKDILASARKVYAA 417
Query: 200 -DRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
D V+ VLV + MP+VLVE+G+I++P E L +EA + LA+ IA G Y
Sbjct: 418 SDGSVREAPFWVLVGALMPAVLVEIGYITHPVEGEKLFNEAYQKALANGIANGIDGY 474
>gi|108813461|ref|YP_649228.1| N-acetylmuramoyl-L-alanine amidase-family protein [Yersinia pestis
Nepal516]
gi|108777109|gb|ABG19628.1| N-acetylmuramoyl-L-alanine amidase-family protein [Yersinia pestis
Nepal516]
Length = 637
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 155/321 (48%), Gaps = 26/321 (8%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D GA+G NGL+EK++ +++A R+ L+ ++ P K + TR D+F+++MG
Sbjct: 243 VAIDAGHGGQDPGAIGQNGLKEKNVTISIARRLEALL-NRDPMFKPVLTRNGDYFISVMG 301
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K A++ ISIH ++ G +V+ + R + M + Q E L+
Sbjct: 302 RSDVARKQGANVLISIHADAAP-NRSATGASVWVLSNRRANSEMGNWLEQHEKQSELLGG 360
Query: 152 DYRTVYK-GFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + K+ +++Q H R + +L
Sbjct: 361 AGDVLANTASDPYLSQAVLDLQFGHSQRVGYDVATKVLRELQ---TVGDIHKRKPEHASL 417
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY------KEDYDRR 262
VL +PS+LVE GFISN E R LGS A ++++A AI +G Y + D
Sbjct: 418 GVLRSPDIPSLLVETGFISNSTEERLLGSSAYQEKIAQAIYKGLRSYFLANPLQSDPKVE 477
Query: 263 SGKVSEPAP--QATEEEDKVEVEPEDNGISSVADMSDGKESIAPKG----HAVKPDEGAH 316
S + E A +T+ + EP N ISS A S + P G H V+ E
Sbjct: 478 SRPLIETAAVDSSTQRSGISQPEPIVNNISSNAQ-SGRSSATLPAGKSKIHNVQRGETLS 536
Query: 317 SAKKTYKIQ--ILSSTTKLKN 335
Y + +L LKN
Sbjct: 537 GIASQYGVSMAVLRQNNTLKN 557
>gi|154174999|ref|YP_001407882.1| N-acetylmuramoyl-L-alanine amidase domain protein [Campylobacter
curvus 525.92]
gi|112803453|gb|EAU00797.1| N-acetylmuramoyl-L-alanine amidase domain protein [Campylobacter
curvus 525.92]
Length = 491
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 118/230 (51%), Gaps = 21/230 (9%)
Query: 34 TVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
T+VID GHGG D GA+ ++EK LAV ++G ++K + KV +TR D F+ L
Sbjct: 271 TIVIDPGHGGSDPGAISGKMQEKVAVLAVGKKLGEILKKR--GYKVYFTRSNDTFINLRT 328
Query: 94 RAEYANKNNADLFISIHVNSQE---RGHGGYGTETYVMGHERNSKNMAVVQRENAVILME 150
R +YAN ADLF+SIH N+ + +G ET+ + R+ ++ EN + E
Sbjct: 329 RTKYANDKMADLFVSIHANAAPNAVKAASMHGIETFFLSPARSERSKNAAALENKSDIEE 388
Query: 151 KDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH-----DRGVKL 205
+Y + + + E I S KL +Q+ +A+ R D GV+
Sbjct: 389 MNYFSQQTFLNVLNREKII-----------ASNKLGIDMQRELLAQARKVYSASDGGVRE 437
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VLV + MP+VLVE+G+I++P E + L +A ++ LA IA G Y
Sbjct: 438 APFWVLVGALMPAVLVEIGYITHPVEGKMLYDDAYQNALALGIANGVDSY 487
>gi|22124541|ref|NP_667964.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis KIM]
gi|45440380|ref|NP_991919.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis biovar
Microtus str. 91001]
gi|89102922|ref|ZP_01175524.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Yersinia pestis biovar
Orientalis str. IP275]
gi|108809904|ref|YP_653820.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pestis Antiqua]
gi|145600851|ref|YP_001164927.1| N-acetylmuramoyl-L-alanine amidase-family protein [Yersinia pestis
Pestoides F]
gi|21957339|gb|AAM84215.1|AE013665_4 N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis KIM]
gi|45435236|gb|AAS60796.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis biovar
Microtus str. 91001]
gi|108781817|gb|ABG15875.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pestis Antiqua]
gi|145212547|gb|ABP41954.1| N-acetylmuramoyl-L-alanine amidase-family protein [Yersinia pestis
Pestoides F]
Length = 637
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 155/321 (48%), Gaps = 26/321 (8%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D GA+G NGL+EK++ +++A R+ L+ ++ P K + TR D+F+++MG
Sbjct: 243 VAIDAGHGGQDPGAIGQNGLKEKNVTISIARRLEALL-NRDPMFKPVLTRNGDYFISVMG 301
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K A++ ISIH ++ G +V+ + R + M + Q E L+
Sbjct: 302 RSDVARKQGANVLISIHADAAP-NRSATGASVWVLSNRRANSEMGNWLEQHEKQSELLGG 360
Query: 152 DYRTVYK-GFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + K+ +++Q H R + +L
Sbjct: 361 AGDVLANTASDPYLSQAVLDLQFGHSQRVGYDVATKVLRELQ---TVGDIHKRKPEHASL 417
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY------KEDYDRR 262
VL +PS+LVE GFISN E R LGS A ++++A AI +G Y + D
Sbjct: 418 GVLRSPDIPSLLVETGFISNSTEERLLGSSAYQEKIAQAIYKGLRSYFLANPLQSDPKVE 477
Query: 263 SGKVSEPAP--QATEEEDKVEVEPEDNGISSVADMSDGKESIAPKG----HAVKPDEGAH 316
S + E A +T+ + EP N ISS A S + P G H V+ E
Sbjct: 478 SRPLIETAAVDSSTQRSGISQPEPIVNNISSNAQ-SGRSSATLPAGKSKIHNVQRGETLS 536
Query: 317 SAKKTYKIQ--ILSSTTKLKN 335
Y + +L LKN
Sbjct: 537 GIASQYGVSMAVLRQNNTLKN 557
>gi|94263068|ref|ZP_01286887.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1]
gi|93456611|gb|EAT06719.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1]
Length = 569
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 24/230 (10%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
VVID GHGG D GA+G G +EKD+ L VA + ++++ + +V + TR+ D ++ L
Sbjct: 346 VVIDPGHGGKDPGAIGPGGTKEKDVTLRVARLLAKVLEQQGSEV--ILTRKSDIYLPLEE 403
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGH-ERNSKNMAVVQRENAVILMEKD 152
R AN ADLF+SIH N+ G ETYV+ + + M V ENA
Sbjct: 404 RTAIANSQGADLFVSIHANAAPNRQA-RGVETYVLDMVASDDEAMRVAALENA------- 455
Query: 153 YRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQ-------KGFVAKGRHDRGVKL 205
+ + F S I+ EL+ +T +S++LA +Q + + G DRGV+
Sbjct: 456 --SSARSF---SELQGIVHELLNHTKLQESMQLADAVQSTTVNTLRRYYGDGIQDRGVRR 510
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VL+ + MP++LVE+GF+SNP E + L + + LA +IA G +Y
Sbjct: 511 APFVVLIGARMPAMLVEVGFLSNPEEEKKLADDEYLNRLAHSIAAGIGQY 560
>gi|56694927|ref|YP_164437.1| lysin [Bacillus clarkii bacteriophage BCJA1c]
gi|52631354|gb|AAU85106.1| lysin [Bacillus clarkii bacteriophage BCJA1c]
Length = 355
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 84/246 (34%), Positives = 116/246 (47%), Gaps = 45/246 (18%)
Query: 30 NRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
NR V IDAGHGG D GAV NGLREKD+ L VAL V ++++++ +V+V +RE D F+
Sbjct: 9 NRPVKVFIDAGHGGSDPGAVANGLREKDLCLQVALAVKTILENEYENVEVRLSRETDVFL 68
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILM 149
TL R AN AD+FISIH N+ G+ T Y RN+ N R+ V +
Sbjct: 69 TLGERCRLANNWGADIFISIHFNAFTPAATGFETFRY-----RNAPNRT---RDAHVEIH 120
Query: 150 EKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNLA 209
+ ++G P DRG K
Sbjct: 121 RVMFAQAFRGKMP-------------------------------------DRGSKTAGFY 143
Query: 210 VLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVSEP 269
V+ + M +VL E GF++N +AR+L S A E+A A A G A +R K ++P
Sbjct: 144 VVKNTNMTAVLTEGGFLTNSNDARHLKSGAFLREVAEAHAAGIASIFTSVKKRQAKSNKP 203
Query: 270 APQATE 275
+P TE
Sbjct: 204 SPSITE 209
>gi|134093682|ref|YP_001098757.1| N-acetylmuramoyl-L-alanine amidase [Herminiimonas arsenicoxydans]
gi|133737585|emb|CAL60628.1| N-acetylmuramoyl-L-alanine amidase [Herminiimonas arsenicoxydans]
Length = 433
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 124/232 (53%), Gaps = 11/232 (4%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
Q NR T+ +D GHGG D GAVG G EK+I LA+A R+ ++ +HP+++V+ TR+ D
Sbjct: 196 QVNRMLTIALDPGHGGEDPGAVGRGGSYEKNIVLAIAKRLKAKLE-QHPNMRVMLTRDGD 254
Query: 87 FFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQREN 144
+FV L R + A K ADLF+SIH ++ + G+ + + + S A + +EN
Sbjct: 255 YFVPLHVRVQKARKVQADLFVSIHADAFVQPTAN-GSSVFALSEKGASSTAARWLANKEN 313
Query: 145 AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGV 203
A L+ K D + + ++ +L + S+KL + + R H V
Sbjct: 314 AADLIGG---ANIKNHDKQLAS--VLLDLSTTAQINDSLKLGKAVLNEIGGINRLHKGAV 368
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ AVL +PS+L+E FISNPAE L +A +D +A A+++G +Y
Sbjct: 369 EQAGFAVLKAPDIPSILIETAFISNPAEEARLNDDAYQDRMADAVSQGIRKY 420
>gi|77633848|ref|ZP_00795963.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Yersinia pestis
Angola]
Length = 631
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 155/321 (48%), Gaps = 26/321 (8%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D GA+G NGL+EK++ +++A R+ L+ ++ P K + TR D+F+++MG
Sbjct: 237 VAIDAGHGGQDPGAIGQNGLKEKNVTISIARRLEALL-NRDPMFKPVLTRNGDYFISVMG 295
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K A++ ISIH ++ G +V+ + R + M + Q E L+
Sbjct: 296 RSDVARKQGANVLISIHADAAP-NRSATGASVWVLSNRRANSEMGNWLEQHEKQSELLGG 354
Query: 152 DYRTVYK-GFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + K+ +++Q H R + +L
Sbjct: 355 AGDVLANTASDPYLSQAVLDLQFGHSQRVGYDVATKVLRELQ---TVGDIHKRKPEHASL 411
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY------KEDYDRR 262
VL +PS+LVE GFISN E R LGS A ++++A AI +G Y + D
Sbjct: 412 GVLRSPDIPSLLVETGFISNSTEERLLGSSAYQEKIAQAIYKGLRSYFLANPLQSDPKVE 471
Query: 263 SGKVSEPAP--QATEEEDKVEVEPEDNGISSVADMSDGKESIAPKG----HAVKPDEGAH 316
S + E A +T+ + EP N ISS A S + P G H V+ E
Sbjct: 472 SRPLIETAAVDSSTQRSGISQPEPIVNNISSNAQ-SGRSSATLPAGKSKIHNVQRGETLS 530
Query: 317 SAKKTYKIQ--ILSSTTKLKN 335
Y + +L LKN
Sbjct: 531 GIASQYGVSMAVLRQNNTLKN 551
>gi|119878606|ref|ZP_01645522.1| N-acetylmuramoyl-L-alanine amidase [Stenotrophomonas maltophilia
R551-3]
gi|119818907|gb|EAX21570.1| N-acetylmuramoyl-L-alanine amidase [Stenotrophomonas maltophilia
R551-3]
Length = 521
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 115/225 (51%), Gaps = 11/225 (4%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R V ID GHGG D GA+G G REKD+ LAVA + R + + P +K TR+ D F+
Sbjct: 270 RHLVVAIDPGHGGQDPGAIGPTGKREKDVTLAVARELARQVNAT-PGLKAYLTRDSDVFI 328
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVI 147
L RA+ A N AD+FISIH ++ E G+ YV+ + S A + +ENA
Sbjct: 329 PLPMRAQKARANKADIFISIHADAAE-NRSATGSSVYVLSTKGASSQRARWLADKENAAD 387
Query: 148 LMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKG-RHDRGVKLG 206
L+ +G + + ++ +L Q+ Y S A + G G H ++
Sbjct: 388 LVGGVRLQQTEG-----TLANVLLDLAQSGYMKASEDAAGHVLGGLKRIGNNHKPNIERA 442
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARG 251
N AVL S MP++LVE FISNP E R L A + ++A A+ G
Sbjct: 443 NFAVLRTSDMPAMLVETAFISNPDEERRLIDPAYQRKIAGAVLDG 487
>gi|15606778|ref|NP_214158.1| N-acetylmuramoyl-L-alanine amidase [Aquifex aeolicus VF5]
gi|2984000|gb|AAC07545.1| N-acetylmuramoyl-L-alanine amidase [Aquifex aeolicus VF5]
Length = 359
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 82/235 (34%), Positives = 131/235 (55%), Gaps = 17/235 (7%)
Query: 29 RNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDF 87
+ R FTVV+DAGHGG D GA+G G++EK +N +A + +K + +V+ TR+ D+
Sbjct: 128 KPRKFTVVVDAGHGGKDPGAIGWRGIKEKWVNFQIAKYLAYYLK-RDGRFRVIMTRKGDY 186
Query: 88 FVTLMGRAEYANKNNADLFISIHVNSQ-ERGHGGYGTETYVMGHERNSKNMAVVQRENAV 146
FV L RA+ A +N A LF+SIH ++ +R GT+ + + + R +K ++ +
Sbjct: 187 FVPLEKRAQIAIRNRAHLFVSIHADAAPKRRPYARGTQIFALSY-RGAK------QKKSK 239
Query: 147 ILMEKDYR-TVYKGFDPRSSE-----SYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRHD 200
+L + Y + +G DPR+ + S + F + D + LA++I++ R
Sbjct: 240 LLSDLSYAGQIIRGGDPRNRQLRLIISDLAFRVTLEDSVDFAKILAREIKRTMRRSVRF- 298
Query: 201 RGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+G+K N AVL +PSVL+E GFI+NP EAR L S + + A AI R +Y
Sbjct: 299 KGIKRANFAVLKTPGIPSVLIEAGFITNPYEARKLRSRHFQKKFAYAIYRAILKY 353
>gi|110601902|ref|ZP_01390064.1| N-acetylmuramoyl-L-alanine amidase [Geobacter sp. FRC-32]
gi|110547383|gb|EAT60647.1| N-acetylmuramoyl-L-alanine amidase [Geobacter sp. FRC-32]
Length = 465
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 115/236 (48%), Gaps = 20/236 (8%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
+G+ + +V+D GHGGHD GAVG G REKD+ L + L++ + +K + + V+ TR
Sbjct: 239 KGKPGKIRRIVVDPGHGGHDPGAVGAGGTREKDVVLQIGLKLAQKLKEEL-GLDVVMTRS 297
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQREN 144
D F+ L R ANK ADLF+S+H N+ G ETY + + K + +EN
Sbjct: 298 TDVFIELQERTAIANKVGADLFVSVHANAS-LNRNASGMETYYLNLAKTEKAAQLAAKEN 356
Query: 145 AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-----H 199
L + S ++F+LM N + S LA ++QK K
Sbjct: 357 GTSL------------EKVSLLQAVLFDLMANYKLNDSAHLADEVQKAAYGKANGLFPMK 404
Query: 200 DRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ GVK G VLV + MPS+LVE F+SN E L ++ +A I G Y
Sbjct: 405 NLGVKQGPFYVLVGATMPSILVEAAFLSNEREEERLKDARYQETVAEGIMAGIKGY 460
>gi|16120705|ref|NP_404018.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pestis CO92]
gi|150260586|ref|ZP_01917314.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis CA88-4125]
gi|115346184|emb|CAL19052.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pestis CO92]
gi|149289994|gb|EDM40071.1| N-acetylmuramoyl-l-alanine amidase II [Yersinia pestis CA88-4125]
Length = 593
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 155/321 (48%), Gaps = 26/321 (8%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D GA+G NGL+EK++ +++A R+ L+ ++ P K + TR D+F+++MG
Sbjct: 199 VAIDAGHGGQDPGAIGQNGLKEKNVTISIARRLEALL-NRDPMFKPVLTRNGDYFISVMG 257
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K A++ ISIH ++ G +V+ + R + M + Q E L+
Sbjct: 258 RSDVARKQGANVLISIHADAAP-NRSATGASVWVLSNRRANSEMGNWLEQHEKQSELLGG 316
Query: 152 DYRTVYK-GFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + K+ +++Q H R + +L
Sbjct: 317 AGDVLANTASDPYLSQAVLDLQFGHSQRVGYDVATKVLRELQ---TVGDIHKRKPEHASL 373
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY------KEDYDRR 262
VL +PS+LVE GFISN E R LGS A ++++A AI +G Y + D
Sbjct: 374 GVLRSPDIPSLLVETGFISNSTEERLLGSSAYQEKIAQAIYKGLRSYFLANPLQSDPKVE 433
Query: 263 SGKVSEPAP--QATEEEDKVEVEPEDNGISSVADMSDGKESIAPKG----HAVKPDEGAH 316
S + E A +T+ + EP N ISS A S + P G H V+ E
Sbjct: 434 SRPLIETAAVDSSTQRSGISQPEPIVNNISSNAQ-SGRSSATLPAGKSKIHNVQRGETLS 492
Query: 317 SAKKTYKIQ--ILSSTTKLKN 335
Y + +L LKN
Sbjct: 493 GIASQYGVSMAVLRQNNTLKN 513
>gi|94266423|ref|ZP_01290118.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1]
gi|93452965|gb|EAT03464.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1]
Length = 569
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 82/230 (35%), Positives = 121/230 (52%), Gaps = 24/230 (10%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
VVID GHGG D GA+G G +EKD+ L VA + ++++ + +V + TR+ D ++ L
Sbjct: 346 VVIDPGHGGKDPGAIGPGGTKEKDVTLRVAKLLAKVLEQQGSEV--ILTRKSDIYLPLEE 403
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGH-ERNSKNMAVVQRENAVILMEKD 152
R AN ADLFISIH N+ G ETYV+ + + M V ENA
Sbjct: 404 RTAIANSQGADLFISIHANAAPNRQA-RGVETYVLDMVASDDEAMRVAALENA------- 455
Query: 153 YRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-------HDRGVKL 205
+ + F S I+ EL+ +T +S++LA +Q V R DRGV+
Sbjct: 456 --SSARSF---SELQGIVHELLNHTKLQESMQLANAVQSTTVNTLRRYYGDDIQDRGVRR 510
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VL+ + MP++LVE+GF+SNP E + L + + LA +IA G +Y
Sbjct: 511 APFVVLIGARMPAMLVEVGFLSNPEEEKKLADDEYLNRLAHSIAAGIGQY 560
>gi|77961308|ref|ZP_00825149.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Yersinia mollaretii
ATCC 43969]
Length = 632
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 102/366 (27%), Positives = 166/366 (45%), Gaps = 31/366 (8%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D GA+G NGL+EK++ +A+A R+ L+ S P K + TR D+F+++MG
Sbjct: 230 VAIDAGHGGQDPGAIGQNGLKEKNVTIAIARRLEALLNSD-PMFKPVLTRNGDYFISVMG 288
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K +A++ +SIH ++ G +V+ + R + M + Q E L+
Sbjct: 289 RSDVARKQSANVLVSIHADAAP-NRSATGASVWVLSNRRANSEMGSWLEQHEKQSELLGG 347
Query: 152 DYRTVYK-GFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + K+ +++Q H R + +L
Sbjct: 348 AGDVLANTASDPYLSQAVLDLQFGHSQRVGYDVATKVLRELQN---IGDIHKRRPEHASL 404
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVSE 268
VL +PS+LVE GFISN E R LGS A ++++A AI +G Y + ++ E
Sbjct: 405 GVLRSPDIPSLLVETGFISNSTEERLLGSSAYQEKIAQAIYKGLRSYFLAHPLQADPKVE 464
Query: 269 PAP-------------QATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGA 315
P + D V + +S+ ++ GK I H V+ E
Sbjct: 465 NRPLIETAAVDSSSSRSRVNQPDPVVSNAQSGRVSATKTIATGKSQI----HKVQRGETL 520
Query: 316 HSAKKTYKIQ--ILSSTTKLKNGDKRLKGYKVVIEQRGGRFFYLTGAVSSEDEARHLRKK 373
Y + +L LKN D G ++ + G +T ++ + K
Sbjct: 521 SGIASQYGVSMAVLRQNNTLKN-DVVWVGQRLKVPASGSTAAAVTPKAATSKTTASTKAK 579
Query: 374 VRKSFP 379
KS P
Sbjct: 580 SNKSQP 585
>gi|91775734|ref|YP_545490.1| N-acetylmuramoyl-L-alanine amidase [Methylobacillus flagellatus KT]
gi|91709721|gb|ABE49649.1| N-acetylmuramoyl-L-alanine amidase [Methylobacillus flagellatus KT]
Length = 443
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 120/229 (52%), Gaps = 11/229 (4%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R T+ IDAGHGG D GA G G EK++ LA+A ++ + ++ P+++ + TR+ D+F+
Sbjct: 207 RIITIAIDAGHGGEDPGAKGARGSYEKNVTLAIAKKLKAAVDAE-PNMRGVLTRDGDYFI 265
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVI 147
L GR A K NADLF+SIH ++ G+ + + + MA + QREN
Sbjct: 266 PLHGRVVKARKMNADLFVSIHADAALSAQAK-GSSVFALSETGATSAMARLLAQRENESD 324
Query: 148 LMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGF-VAKGRHDRGVKLG 206
L+ +V DP + + + +L Q + S++L + + H R V+
Sbjct: 325 LIGGVSLSVK---DPNLART--LLDLSQTATINDSLRLGKLVLDHMGTINTLHKRHVEQA 379
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
AVL +PS+LVE FI+NP E R L A +D+L S+I G +Y
Sbjct: 380 GFAVLKSPDIPSILVETAFITNPEEERKLNDSAHQDKLVSSILSGIKKY 428
>gi|56477957|ref|YP_159546.1| N-acetylmuramoyl-L-alanine amidase, AMIC precursor protein
[Azoarcus sp. EbN1]
gi|56314000|emb|CAI08645.1| N-acetylmuramoyl-L-alanine amidase, AMIC precursor protein
[Azoarcus sp. EbN1]
Length = 446
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 125/234 (53%), Gaps = 13/234 (5%)
Query: 30 NRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFF 88
NR TV +D GHGG D GAVG G EK++ L++A R+ R I ++ +++ + TR+ D+F
Sbjct: 208 NRLLTVALDPGHGGEDPGAVGRRGSFEKNVTLSIARRLKRKIDAE-TNMRAVLTRDGDYF 266
Query: 89 VTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAV 146
V L R A + +DLF+SIH ++ R G+ +V+ S + A + Q+EN
Sbjct: 267 VPLRQRVTRARQVQSDLFVSIHADAFVRPEA-RGSSVFVLSERGASSSAARWLAQKENDA 325
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI--QKGFVAKGRHDRGVK 204
L+ +G R+ + +L Q + S+KL + + + G + H V+
Sbjct: 326 DLIGGVNLAKQEGHLART-----LLDLSQTATINDSLKLGKAVLNELGDI-NTLHKAHVE 379
Query: 205 LGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKED 258
AVL +PS+LVE FISNP E R L +A +D++A AI RG RY +D
Sbjct: 380 QAGFAVLKAPDIPSILVETAFISNPEEERRLNDDAYQDKMAEAIMRGLRRYFKD 433
>gi|51594774|ref|YP_068965.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pseudotuberculosis IP 32953]
gi|153949299|ref|YP_001402610.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia
pseudotuberculosis IP 31758]
gi|51588056|emb|CAH19662.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia pseudotuberculosis IP 32953]
gi|152960794|gb|ABS48255.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Yersinia
pseudotuberculosis IP 31758]
Length = 593
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 155/321 (48%), Gaps = 26/321 (8%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D GA+G NGL+EK++ +++A R+ L+ ++ P K + TR D+F+++MG
Sbjct: 199 VAIDAGHGGQDPGAIGQNGLKEKNVTISIARRLEALL-NRDPMFKPVLTRNGDYFISVMG 257
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K A++ ISIH ++ G +V+ + R + M + Q E L+
Sbjct: 258 RSDVARKQGANVLISIHADAAP-NRSATGASVWVLSNRRANSEMGNWLEQHEKQSELLGG 316
Query: 152 DYRTVYK-GFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + K+ +++Q H R + +L
Sbjct: 317 AGDVLANTASDPYLSQAVLDLQFGHSQRVGYDVATKVLRELQ---TVGDIHKRKPEHASL 373
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY------KEDYDRR 262
VL +PS+LVE GFISN E R LGS A ++++A AI +G Y + D
Sbjct: 374 GVLRSPDIPSLLVETGFISNSTEERLLGSSAYQEKIAQAIYKGLRSYFLANPLQADPKVE 433
Query: 263 SGKVSEPAP--QATEEEDKVEVEPEDNGISSVADMSDGKESIAPKG----HAVKPDEGAH 316
S + E A +T+ + EP N ISS A S + P G H V+ E
Sbjct: 434 SRPLIETAAVDSSTQRSGISQPEPIVNNISSNAQ-SGRSSATLPAGKSKIHNVQRGETLS 492
Query: 317 SAKKTYKIQ--ILSSTTKLKN 335
Y + +L LKN
Sbjct: 493 GIASQYGVSMAVLRQNNTLKN 513
>gi|152973039|ref|YP_001338185.1| N-acetylmuramoyl-l-alanine amidase II [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150957888|gb|ABR79918.1| N-acetylmuramoyl-l-alanine amidase II [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 447
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 76/227 (33%), Positives = 121/227 (53%), Gaps = 11/227 (4%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G NG +EK++ +A+A ++ L+ + P K + TR+ D+F+++MG
Sbjct: 197 IAIDAGHGGQDPGAIGPNGTKEKNVTIAIARKLRALLNAD-PQFKPVLTRDGDYFISVMG 255
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R+E A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 256 RSEVARKQNANFLVSIHADAAP-NRDATGASVWVLSNRRANSEMAGWLEQHEKQSELLGG 314
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + + Q+Q+ H R + +L
Sbjct: 315 AGDVLANSQADPYLSQAVLDLQFGHSQRVGYDVATNVLSQLQR---IGNLHKRRPEHASL 371
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VL +PS+LVE GFISN E R LGS+ ++++A AI G Y
Sbjct: 372 GVLRSPDIPSILVETGFISNNGEERLLGSDDYQEQIAEAIYNGLRNY 418
>gi|57241090|ref|ZP_00369037.1| N-acetylmuramoyl-L-alanine amidase (amiA) [Campylobacter lari
RM2100]
gi|57018011|gb|EAL54786.1| N-acetylmuramoyl-L-alanine amidase (amiA) [Campylobacter lari
RM2100]
Length = 646
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 22/230 (9%)
Query: 35 VVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+VID GHGG D G +G+ G+REKD+ L+VAL++G +K + K+ YTR D F+ L
Sbjct: 425 IVIDPGHGGKDPGTLGDKGVREKDVVLSVALKLGNELKKR--GYKIYYTRSTDKFINLRD 482
Query: 94 RAEYANKNNADLFISIHVNS---QERGHGGYGTETYVMGHERNSKNMAVVQRENAVILME 150
R AN+ ADLFISIH N+ ++R G ET+ + R+ ++ + EN E
Sbjct: 483 RTSMANEKMADLFISIHANAAPNKQRAKTLQGIETFFLSPARSERSKKAAELENQSDFEE 542
Query: 151 KDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH-----DRGVKL 205
++ S ++++ F + S KLA +QK ++ R D GV+
Sbjct: 543 MNF---------FSKQTFLNF--LNREKIVASNKLAIDVQKSILSNVRKKYKVVDGGVRE 591
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VLV + MP++L+E G+IS+P+E L ++ ++ LA IA G Y
Sbjct: 592 APFWVLVGAQMPAILIETGYISHPSERNRLTNKNFQELLAIGIANGIESY 641
>gi|77976473|ref|ZP_00831960.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Yersinia intermedia
ATCC 29909]
Length = 610
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 93/322 (28%), Positives = 152/322 (47%), Gaps = 30/322 (9%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D GA+G NGL+EK++ +A+A R+ L+ S P K + TR D+F+++MG
Sbjct: 218 VAIDAGHGGQDPGAIGQNGLKEKNVTIAIARRLEALLNSD-PMFKPVLTRNGDYFISVMG 276
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K A++ +S+H ++ G +V+ + R + M + Q E L+
Sbjct: 277 RSDVARKQGANVLVSVHADAAP-NRSATGASVWVLSNRRANSEMGSWLEQHEKQSELLGG 335
Query: 152 DYRTVYK-GFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + K+ +++Q H R + +L
Sbjct: 336 AGDVLANTASDPYLSQAVLDLQFGHSQRVGYDVATKVLRELQ---TVGDIHKRRPEHASL 392
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVSE 268
VL +PS+LVE GFISN E R LGS A ++++A AI +G Y + ++ E
Sbjct: 393 GVLRSPDIPSLLVETGFISNSTEERLLGSSAYQEKIAQAIYKGLRSYFLAHPLQADPKVE 452
Query: 269 PAP-------------QATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGA 315
P + + D + + +S+V ++ GK I H V+ E
Sbjct: 453 NRPLIETAAVDSSVQRSSVNQPDPIVSNAQSGRVSAVKPVAAGKSQI----HKVQRGETL 508
Query: 316 HSAKKTYKIQ--ILSSTTKLKN 335
Y + +L LKN
Sbjct: 509 SGIASQYGVSMAVLRQNNTLKN 530
>gi|152993324|ref|YP_001359045.1| N-acetylmuramoyl-L-alanine amidase [Sulfurovum sp. NBC37-1]
gi|151425185|dbj|BAF72688.1| N-acetylmuramoyl-L-alanine amidase [Sulfurovum sp. NBC37-1]
Length = 257
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 85/260 (32%), Positives = 131/260 (50%), Gaps = 25/260 (9%)
Query: 9 YLLLWMTALLLIV-CLPLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVG 67
Y LL M +L + C+ G VVIDAGHGGHD GA+ NG +EKD+ L + ++
Sbjct: 6 YFLLGMAVMLTVTGCV---GPDRSDDLVVIDAGHGGHDCGALCNGKQEKDLVLQITKKLA 62
Query: 68 RLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNS---QERGHGGYGTE 124
+ K K +V TR KD F+ L R A+K +A +FISIH N+ + R G E
Sbjct: 63 KEFKRK--GYRVYLTRGKDKFLKLGERTRIADKMDAKVFISIHANAIADKSRFEAVEGIE 120
Query: 125 TYVMGHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIK 184
TY + R++++ + REN +L D S+ I+ ++ +S K
Sbjct: 121 TYFLQKTRDARSQRIAARENTAVLQGAD----------ALSKDVIIDSVLNGPKIVESNK 170
Query: 185 LAQQIQKGFVA------KGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSE 238
LA +Q G + K + G K VLV ++ PS+LVE+G+I+N E + L +
Sbjct: 171 LAIDVQNGIMRRVQSRYKDARNGGAKPAPFYVLVGASRPSILVEVGYITNSKERKRLFTS 230
Query: 239 AGRDELASAIARGFARYKED 258
++ +A I G +RY ++
Sbjct: 231 DYQERIAEGIVEGVSRYLDN 250
>gi|145621224|ref|ZP_01777210.1| N-acetylmuramoyl-L-alanine amidase [Geobacter bemidjiensis Bem]
gi|144942471|gb|EDJ77610.1| N-acetylmuramoyl-L-alanine amidase [Geobacter bemidjiensis Bem]
Length = 419
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 77/232 (33%), Positives = 112/232 (48%), Gaps = 21/232 (9%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R +VID GHGGHD GAV +G REKDI L + L++ + ++ + + + TR D F+
Sbjct: 192 RIRRIVIDPGHGGHDPGAVSPSGTREKDIVLQIGLKLAQKVREEL-GIDAVMTRSTDVFI 250
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILM 149
L R ANK ADLF+S+H N+ G ETY + + K + +EN L
Sbjct: 251 ELQERTAMANKVGADLFVSVHANAS-LSRAANGIETYYLNLAKTEKAAQLAAKENGTSL- 308
Query: 150 EKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR------HDRGV 203
+ S ++F+LM N + S LA ++QK K + + GV
Sbjct: 309 -----------EKVSMLQAVLFDLMANYKLNDSAHLADEVQKALFKKAQTGYATVKNLGV 357
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
K G VLV + MPS+LVE F+SN + + L ++ A I G Y
Sbjct: 358 KQGPFYVLVGATMPSILVETAFLSNDRDEQKLKDPQYQELTADGILSGIKGY 409
>gi|34556684|ref|NP_906499.1| N-ACETYLMURAMOYL-L-ALANINE AMIDASE [Wolinella succinogenes DSM
1740]
gi|34482398|emb|CAE09399.1| N-ACETYLMURAMOYL-L-ALANINE AMIDASE [Wolinella succinogenes]
Length = 397
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 82/236 (34%), Positives = 120/236 (50%), Gaps = 30/236 (12%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+V+D GHGG D GA G +G+ EK++ L+VA + + + ++ KV TR KD F+ L
Sbjct: 176 IVLDPGHGGKDCGAQGVDGVCEKEVVLSVAKYLSQELTTR--GYKVFMTRSKDVFINLRD 233
Query: 94 RAEYANKNNADLFISIHVNS--QERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEK 151
R ++AN ADLFISIH N+ +++ +G ETY + + R+ + V EN
Sbjct: 234 RTKFANDKEADLFISIHANAVPKDKASKMHGIETYFLSNARSERAKNVAALENK------ 287
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQ----SIKLAQQIQKGFVAKGRH------DR 201
D + +Y + NT Q S KLA IQ G + + R D
Sbjct: 288 ---------DDIETMNYFSKQSFLNTINSQRMIASNKLAIDIQFGMLRQAREKFEGITDG 338
Query: 202 GVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKE 257
GV+ G VL + MPSVL+ELG+I++P E + L + + LA IA G Y E
Sbjct: 339 GVREGPFWVLAGALMPSVLLELGYITHPTEGKRLAQSSYQKLLAQGIADGVDGYFE 394
>gi|41582283|gb|AAS07897.1| N-acetylmuramoyl-L-alanine amidase [uncultured bacterium 463]
Length = 435
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 119/231 (51%), Gaps = 15/231 (6%)
Query: 31 RAFTVVIDAGHGGHDSGAVGNGLR-EKDINLAVALRVGRLIKSKHPDVKVLYT--REKDF 87
R + IDAGHGG D GA+G G R EKD+ LA+A V L K+ DV T R D+
Sbjct: 148 RNIIIAIDAGHGGEDPGALGPGRRREKDVVLAIAREVNALFKA---DVGFTPTLIRSGDY 204
Query: 88 FVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENA 145
+V+L GR + A K ADLF+SIH ++ +R G Y + + A + QRENA
Sbjct: 205 YVSLKGRRDLARKRQADLFVSIHADAFKRKEAN-GASVYALSTRGATSTAARYLAQRENA 263
Query: 146 VILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVK 204
L+ + D + ++ +L + D S+++ Q+ + R H + V+
Sbjct: 264 ADLVGGVSLS-----DKDDMLAGVLADLSMTSTLDTSLQVGAQVLRNVDNVARLHKKNVE 318
Query: 205 LGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
AVL +PS+LVE GFISNP EA+ L + + + ++A AI G Y
Sbjct: 319 QAGFAVLKSPDIPSILVETGFISNPTEAKRLATSSYQKKMARAIHSGIKSY 369
>gi|153956344|ref|YP_001397109.1| hypothetical protein CKL_3753 [Clostridium kluyveri DSM 555]
gi|146349202|gb|EDK35738.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
Length = 599
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 89/281 (31%), Positives = 133/281 (47%), Gaps = 67/281 (23%)
Query: 30 NRAFTVVIDAGHGGHDSGAV-GNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFF 88
N +TV IDAGHGG+D G + G+GL EKD+NL+VAL+VG +++ + V+YTR+ D
Sbjct: 134 NSKYTVTIDAGHGGNDKGNISGSGLNEKDVNLSVALKVGNILEQN--GINVVYTRKDDNI 191
Query: 89 V-----TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRE 143
L R + AN +D+F++IH NS G ETY G+ ++N+A
Sbjct: 192 SWDSSSDLKSRFDIANNAKSDMFVTIHCNSYTENSAVNGIETYYAGYSDEAENIA----- 246
Query: 144 NAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGV 203
N Q+Q + GR DRGV
Sbjct: 247 --------------------------------NKIQNQMVSYT----------GRMDRGV 264
Query: 204 KLG--NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARG----FARYKE 257
K G +L + P+V+VELGF++N E+ LGS+ +++ A+AIA+G + E
Sbjct: 265 KEGQPQHKILRGTLSPAVMVELGFMTNSQESSLLGSDDYQNKSAAAIAKGVLESLSSLNE 324
Query: 258 DYDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDG 298
+ + +S+ A Q TE ++ IS A MSDG
Sbjct: 325 NKELMVSSISDLANQITEGDEY------SLPISVQATMSDG 359
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 75/232 (32%), Positives = 102/232 (43%), Gaps = 64/232 (27%)
Query: 35 VVIDAGHG-GHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
+VID GHG G D GA G NGL+E DI LAV L+ G++++ + V+YTR D T M
Sbjct: 416 IVIDPGHGMGSDVGATGINGLQEDDITLAVGLKTGKILEEH--GINVVYTRTTDMRSTPM 473
Query: 93 G-------RAEYANKNNADLFISIHVNSQERGHGGYGTET-YVMGHERNSKNMAVVQREN 144
R + +N NA F+ IH NS GTET Y G+E K
Sbjct: 474 SVTESLQKRCDISNNANAKYFVCIHTNSFNVPSAN-GTETLYYTGNEEGRK--------- 523
Query: 145 AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRGV 203
LA IQ V + G ++RG+
Sbjct: 524 ----------------------------------------LATYIQNSIVEEVGTYNRGL 543
Query: 204 KLGN-LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFAR 254
K G+ L + + P+VL ELGF++NP +A L S+ R + A AIA G +
Sbjct: 544 KDGSWLYIAQNTVAPAVLTELGFVTNPEDAAKLSSDEYRAKFAQAIADGILK 595
>gi|53804639|ref|YP_113758.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Methylococcus
capsulatus str. Bath]
gi|53758400|gb|AAU92691.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Methylococcus
capsulatus str. Bath]
Length = 448
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 26/268 (9%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
+G + F V +DAGHGG D+GA+G G +EKDI LA+A ++ L+ ++ P ++ + R+
Sbjct: 192 DGPHRKRFVVALDAGHGGKDTGALGAGGSQEKDIVLAIARKLEALLNAE-PGIRPVMIRQ 250
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQR 142
D F+ L R E A K +ADLF+S+H ++ H G + + + A + R
Sbjct: 251 NDEFIDLRQRMERARKEHADLFVSLHADAYNDPHAK-GASVFTLSEHGATSEAARRLADR 309
Query: 143 ENA------VILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFV-A 195
ENA V L +KD + ++ +L QN + S + A I + +
Sbjct: 310 ENAADRIGGVALQDKD-----------EVLASVLLDLTQNATLEASDRAAASILQALQKS 358
Query: 196 KGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H G++ VL +PSVLVE FISNP E L S A +D++A+A+A G Y
Sbjct: 359 HAIHQPGIQKAGFVVLKSPDVPSVLVETAFISNPEEELKLRSPAYQDQIAAALAEGIRSY 418
Query: 256 -KEDYDRRSGKVSEPAPQ--ATEEEDKV 280
K +S P Q A DKV
Sbjct: 419 LKRTRPATVAPISPPVRQEVAASVTDKV 446
>gi|152980575|ref|YP_001352154.1| N-acetylmuramoyl-L-alanine amidase [Janthinobacterium sp.
Marseille]
gi|151280652|gb|ABR89062.1| N-acetylmuramoyl-L-alanine amidase [Janthinobacterium sp.
Marseille]
Length = 434
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 76/232 (32%), Positives = 123/232 (53%), Gaps = 11/232 (4%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
Q +R T+ +D GHGG D GAVG G EK I L++A R+ ++ +HP+++V+ TR+ D
Sbjct: 197 QVSRMLTIALDPGHGGEDPGAVGRGGSYEKHIVLSIAKRLKAKLE-QHPNMRVMLTRDGD 255
Query: 87 FFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQREN 144
+FV L R + A K ADLF+SIH ++ + G+ + + + S A + +EN
Sbjct: 256 YFVPLHVRVQKARKVQADLFVSIHADAFVQPTAN-GSSVFALSEKGASSTAARWLANKEN 314
Query: 145 AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGV 203
A L+ T K D + + ++ +L + S++L + + R H V
Sbjct: 315 AADLIGG---TNIKNHDKQLAS--VLLDLSTTAQINDSLRLGKAVLNEIGGVNRLHKNAV 369
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ AVL +PS+L+E FISNP E L +A +D +A A+A+G +Y
Sbjct: 370 EQAGFAVLKAPDIPSILIETAFISNPEEEAKLNDDAYQDRMADAVAQGIRKY 421
>gi|123440757|ref|YP_001004749.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia enterocolitica subsp. enterocolitica 8081]
gi|122087718|emb|CAL10503.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia enterocolitica subsp. enterocolitica 8081]
Length = 620
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 122/227 (53%), Gaps = 11/227 (4%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D GA+G NGL+EK++ +A+A R+ L+ S P K + TR D+F+++MG
Sbjct: 220 VAIDAGHGGQDPGAIGQNGLKEKNVTIAIARRLEALLNSD-PMFKPVLTRNGDYFISVMG 278
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K A++ +S+H ++ G +V+ + R + M + Q E L+
Sbjct: 279 RSDVARKQGANVLVSVHADAAP-NRSATGASVWVLSNRRANSEMGNWLEQHEKQSELLGG 337
Query: 152 DYRTVYK-GFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + K+ ++Q+ H R + +L
Sbjct: 338 AGDVLANTASDPYLSQAVLDLQFGHSQRVGYDVATKVLNELQR---VGDIHKRRPEHASL 394
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VL +PS+LVE GFISN E R LGS A ++++A AI +G Y
Sbjct: 395 GVLRSPDIPSLLVETGFISNSTEERLLGSSAYQEKIAQAIYKGLRSY 441
>gi|154686678|ref|YP_001421839.1| YqiI [Bacillus amyloliquefaciens FZB42]
gi|154352529|gb|ABS74608.1| YqiI [Bacillus amyloliquefaciens FZB42]
Length = 208
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 84/233 (36%), Positives = 113/233 (48%), Gaps = 56/233 (24%)
Query: 24 PLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTR 83
PL+G+ T+ IDAGHGG DSGA GNGL EK+INLAV+ +V + K + K + +R
Sbjct: 27 PLQGK-----TIYIDAGHGGEDSGASGNGLLEKNINLAVSNKV--IAKLETEGAKPVASR 79
Query: 84 EKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRE 143
D F+ L R A+ + +DLF+S+H NS GTETY
Sbjct: 80 TDDTFLRLDERVAKASASQSDLFVSLHTNSAVS--TASGTETY----------------- 120
Query: 144 NAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRG 202
+ + Y+G D S +LA IQ+ V G DRG
Sbjct: 121 ---------FNSTYEGAD--------------------SERLASDIQQQLVTSLGMKDRG 151
Query: 203 VKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VK V+ +S MPSVL ELGFI+NP +A L S+ G++ A A+ G Y
Sbjct: 152 VKEAPFYVITYSKMPSVLAELGFITNPQDADKLKSDNGQEHAADAVVNGIETY 204
>gi|77163868|ref|YP_342393.1| N-acetylmuramoyl-L-alanine amidase [Nitrosococcus oceani ATCC
19707]
gi|76882182|gb|ABA56863.1| N-acetylmuramoyl-L-alanine amidase [Nitrosococcus oceani ATCC
19707]
Length = 472
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 124/237 (52%), Gaps = 23/237 (9%)
Query: 29 RNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDF 87
+ R + IDAGHGG D GA+G G +EK + LA+A ++ RL+ + P ++ + R+ D+
Sbjct: 191 KPRDIVIAIDAGHGGEDPGAIGPQGTQEKQVVLAIARKLARLL-DREPGMRPVMIRKGDY 249
Query: 88 FVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQREN- 144
+V L R + A ++ ADLFISIH ++ G+ Y++ + S A + +REN
Sbjct: 250 YVGLRERIKEARQHKADLFISIHADAFTHPKA-RGSSVYILSEKGASSEAARYLAKRENE 308
Query: 145 -----AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR- 198
V L EKD + ++ +L Q + + S+K+A + G G+
Sbjct: 309 SEFIGGVNLNEKD-----------DLLARVLLDLSQTSTHEASLKIADTLLAGLKNVGQV 357
Query: 199 HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H + V+ AVL +PSVL+E FISNP E R L S+ + +LA+A+ G Y
Sbjct: 358 HSQHVQHAGFAVLKSPDIPSVLIETAFISNPHEERQLRSQTHQQQLANAMMNGIRYY 414
>gi|86159781|ref|YP_466566.1| N-acetylmuramoyl-L-alanine amidase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85776292|gb|ABC83129.1| N-acetylmuramoyl-L-alanine amidase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 249
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 93/241 (38%), Positives = 123/241 (51%), Gaps = 14/241 (5%)
Query: 29 RNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDF 87
R +F VID GHGG GAV G+REK++ L +A RV + K K + TR D
Sbjct: 16 RGPSFVAVIDPGHGGEQEGAVSPGGVREKELTLQIARRVA--ARLKRTGAKAVLTRTADA 73
Query: 88 FVTLMGRAEYANKNNADLFISIHVNSQ---ERGHGGYGTETYVMGHERNSKNMA-VVQRE 143
V L RA AN ADLF+SIH+NS E +G ETY + + + + V RE
Sbjct: 74 SVPLAARAALANAIRADLFVSIHLNSMPSAEARRTSHGIETYFLSADASDASATAVAARE 133
Query: 144 NAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK-GRHDRG 202
NA D DP + I+ +L QS +LA +Q+ VA G DRG
Sbjct: 134 NA------DRLAGEPELDPSDPVAAILSDLEDTAALQQSSRLAYAVQERLVAALGAEDRG 187
Query: 203 VKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
VK VL + MP+VL+E+GFIS+PAE L S A ++++A AI G A Y+ R
Sbjct: 188 VKQAPFYVLAGARMPAVLLEVGFISHPAEGDRLRSTAYQEQVAGAIVEGIAAYRAQTLRA 247
Query: 263 S 263
S
Sbjct: 248 S 248
>gi|77957803|ref|ZP_00821850.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Yersinia bercovieri
ATCC 43970]
Length = 627
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 99/356 (27%), Positives = 168/356 (47%), Gaps = 33/356 (9%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D GA+G NGL+EK++ +A++ R+ L+ S P K + TR D+F+++MG
Sbjct: 230 VAIDAGHGGQDPGAIGQNGLKEKNVTIAISRRLEALLNSD-PMFKPVLTRNGDYFISVMG 288
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K +A++ +SIH ++ G +V+ + R + M + Q E L+
Sbjct: 289 RSDVARKQSANVLVSIHADAAP-NRSATGASVWVLSNRRANSEMGSWLEQHEKQSELLGG 347
Query: 152 DYRTVYK-GFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + K+ +++Q G + K R + +
Sbjct: 348 AGDVLANTASDPYLSQAVLDLQFGHSQRVGYDVATKVLRELQTIGDIHKSRPEHA----S 403
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVS 267
L VL +PS+LVE GFISN E R LGS A ++++A AI +G Y + ++
Sbjct: 404 LGVLRSPDIPSLLVETGFISNSTEERLLGSSAYQEKIAQAIYKGLRSYFLAHPLQADPKV 463
Query: 268 EPAP-------------QATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEG 314
E P + + D V + +S+ ++ GK I H V+ E
Sbjct: 464 ENRPLIETAAVDSSSQRSSVNQPDPVISNAQSGRVSAAKPVATGKSQI----HKVQRGET 519
Query: 315 AHSAKKTYKIQ--ILSSTTKLKNGDKRLKGYKVVIEQRGGRFFYLTGAVSSEDEAR 368
Y + +L + LKN D G ++ + G +T ++ +A+
Sbjct: 520 LSGIASQYGVSMALLRQSNTLKN-DVVWVGQRLKVPASGSAVVAVTPKATASAKAK 574
>gi|77973960|ref|ZP_00829503.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Yersinia frederiksenii
ATCC 33641]
Length = 622
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 121/227 (53%), Gaps = 11/227 (4%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D GA+G NGL+EK + +AVA R+ L+ S P K + TR D+F+++MG
Sbjct: 232 VAIDAGHGGQDPGAIGQNGLQEKRVTIAVARRLEALLNSD-PMFKPVLTRNGDYFISVMG 290
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K A++ +SIH ++ G +V+ + R + M + Q E L+
Sbjct: 291 RSDVARKQGANVLVSIHADAAP-NRSATGASVWVLSNRRANSEMGNWLEQHEKQSELLGG 349
Query: 152 DYRTVYK-GFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + K+ ++Q H R + +L
Sbjct: 350 AGDVLANTASDPYLSQAVLDLQFGHSQRVGYDVATKVLNELQS---IGDIHKRRPEHASL 406
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VL +PS+LVE GFISN E R LGS A ++++A+AI +G Y
Sbjct: 407 GVLRSPDIPSLLVETGFISNSTEERLLGSSAYQEKIANAIYKGLRSY 453
>gi|154149400|ref|YP_001406829.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter hominis ATCC
BAA-381]
gi|153805409|gb|ABS52416.1| N-acetylmuramoyl-L-alanine amidase [Campylobacter hominis ATCC
BAA-381]
Length = 427
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 125/236 (52%), Gaps = 21/236 (8%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDF 87
+ ++ +VIDAGHGG D GA GNGL+EK+I ++A + ++K + KV TR+KD
Sbjct: 201 KHSKGKIIVIDAGHGGKDPGATGNGLKEKNIVFSIACQTAEILKKR--GYKVYLTRDKDV 258
Query: 88 FVTLMGRAEYANKNNADLFISIHVNSQERGHGGY---GTETYVMGHERNSKNMAVVQREN 144
F L R ++AN+ +AD+FISIH N+ G ET+ + R+ ++ V EN
Sbjct: 259 FWNLQSRTKFANRKHADMFISIHANAAPNKKAAASMQGVETFFLSPARSERSKRVATLEN 318
Query: 145 AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH----- 199
+ L + + S E+++ F + S KLA IQ + R
Sbjct: 319 SGDLED---------MNSFSKETFLNF--LNREKIIASNKLAIDIQSYMLHSLRRSFSSK 367
Query: 200 DRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
D GV+ VLV + MP+VLVE+G+I++P E + LG++ + +A I+ G + Y
Sbjct: 368 DGGVREAPFWVLVGAQMPAVLVEVGYITHPKEGKNLGNKTYQKLVAVGISDGVSAY 423
>gi|146329139|ref|YP_001209231.1| N-acetylmuramoyl-L-alanine amidase [Dichelobacter nodosus VCS1703A]
gi|146232609|gb|ABQ13587.1| N-acetylmuramoyl-L-alanine amidase [Dichelobacter nodosus VCS1703A]
Length = 484
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 116/230 (50%), Gaps = 12/230 (5%)
Query: 31 RAFTVVIDAGHGGHDSGAVGN--GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFF 88
R + ID GHGG D GAV G REKD+ LA+A R+ ++ SK +V+ TR++D F
Sbjct: 249 RDILICIDPGHGGKDPGAVNRALGAREKDVVLAIARRLRHILNSK-TGYRVMMTRDRDIF 307
Query: 89 VTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAV 146
++L R + + DLF+SIH ++ E G+ Y++ S +A + RENAV
Sbjct: 308 ISLPERTQLCRRAGGDLFVSIHADAVESNEPS-GSSVYILSTHGASSQLAKYLANRENAV 366
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKL 205
L + +D ++ + + Q + S LAQ+ G H V+
Sbjct: 367 DL---KWGVDVSKYDNDVQQA--LLNIQQEATLESSYILAQETLDALKRVGNVHKVNVER 421
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
N VL +PS+L+E FISN +EAR L S A ++++A IA G Y
Sbjct: 422 ANFVVLRSPEIPSMLIETAFISNNSEARLLMSPAYQEKVAQGIADGIENY 471
>gi|108758052|ref|YP_630238.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Myxococcus xanthus DK
1622]
gi|108461932|gb|ABF87117.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Myxococcus xanthus DK
1622]
Length = 269
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 85/244 (34%), Positives = 122/244 (50%), Gaps = 15/244 (6%)
Query: 25 LEGQRNRAFTVVIDAGHGGHDSGAVGNG-LREKDINLAVALRVGRLIKSKHPDVKVLYTR 83
+ G R ++ID GHGG GA G G LREKD+ L ++LR+ +++ DV TR
Sbjct: 21 IAGAAERPARIIIDPGHGGAKEGAKGPGKLREKDVALQISLRLRDKLEAAGGDV--FLTR 78
Query: 84 EKDFFVTLMGRAEYANKNNADLFISIHVNS---QERGHGGYGTETYVM-GHERNSKNMAV 139
E D V+L R ++N + DLFISIH NS + G ETY + +AV
Sbjct: 79 EHDTLVSLTERVAWSNDHAPDLFISIHANSMPTKRMRARTEGVETYFLSASASGDAALAV 138
Query: 140 VQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH 199
RENA M + RT S+ ++I+ +L + S +LA I V R
Sbjct: 139 ADRENAEAPMSRATRT-------DSTLAFILQDLARTEAHADSSRLAYAIHPRLVRGTRA 191
Query: 200 -DRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKED 258
+RGV+ VL P+VLVE+G+IS+P E LG +++LA AI G + ++
Sbjct: 192 VNRGVQQAPFFVLSGVECPAVLVEVGYISHPVEGPRLGRPEYQEKLAEAITEGVLAFLKE 251
Query: 259 YDRR 262
RR
Sbjct: 252 TRRR 255
>gi|148264431|ref|YP_001231137.1| N-acetylmuramoyl-L-alanine amidase [Geobacter uraniumreducens Rf4]
gi|146397931|gb|ABQ26564.1| N-acetylmuramoyl-L-alanine amidase [Geobacter uraniumreducens Rf4]
Length = 458
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 113/227 (49%), Gaps = 20/227 (8%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+V+D GHGGHD GA+G G +EKD+ L + L++ +K + + + TR D F+ L
Sbjct: 241 IVVDPGHGGHDPGAIGAGGTKEKDVVLQIGLKLAHKLKEEL-GIDAVLTRSTDEFIELQE 299
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R ANK ADLF+S+H N+ G ETY + + K + +EN L
Sbjct: 300 RTAIANKVGADLFVSVHANAS-LNRSANGIETYYLNLAKTEKAAQLAAKENGTSL----- 353
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK--GRH---DRGVKLGNL 208
+ S ++F+LM N + S LA+++QK +K G++ + GVK G
Sbjct: 354 -------EKVSLLQAVLFDLMANYKLNDSAHLAEEVQKAVSSKVNGQYSVKNLGVKQGPF 406
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VLV + MPS+LVE F+SN E L +D A I G Y
Sbjct: 407 YVLVGATMPSILVETAFLSNEREEGRLKDPRYQDITADGILAGIKAY 453
>gi|26251061|ref|NP_757101.1| N-acetylmuramoyl-L-alanine amidase amiB precursor [Escherichia coli
CFT073]
gi|26111493|gb|AAN83675.1|AE016771_186 N-acetylmuramoyl-L-alanine amidase amiB precursor [Escherichia coli
CFT073]
Length = 448
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 197 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNNDPMFKGVLTRDGDYFISVMG 255
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 256 RSDVARKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKQSELLGG 314
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 315 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMINQLQRIGEI----HKRRPEHAS 370
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 371 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 418
>gi|110808087|ref|YP_691607.1| N-acetylmuramoyl-L-alanine amidase amiB precursor [Shigella
flexneri 5 str. 8401]
gi|110617635|gb|ABF06302.1| N-acetylmuramoyl-L-alanine amidase amiB precursor [Shigella
flexneri 5 str. 8401]
Length = 445
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 123/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 194 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNDDPMFKGVLTRDGDYFISVMG 252
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A+K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 253 RSDVAHKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKLSELLGG 311
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 312 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEI----HKRRPEHAS 367
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 368 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 415
>gi|30065541|ref|NP_839712.1| N-acetylmuramoyl-l-alanine amidase II, murein hydrolase [Shigella
flexneri 2a str. 2457T]
gi|56480584|ref|NP_710034.2| N-acetylmuramoyl-l-alanine amidase II, murein hydrolase [Shigella
flexneri 2a str. 301]
gi|30043805|gb|AAP19524.1| N-acetylmuramoyl-l-alanine amidase II, murein hydrolase [Shigella
flexneri 2a str. 2457T]
gi|56384135|gb|AAN45741.2| N-acetylmuramoyl-l-alanine amidase II, murein hydrolase [Shigella
flexneri 2a str. 301]
Length = 445
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 123/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 194 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNDDPMFKGVLTRDGDYFISVMG 252
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A+K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 253 RSDVAHKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKLSELLGG 311
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 312 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEI----HKRRPEHAS 367
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 368 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 415
>gi|75212282|ref|ZP_00712322.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli B171]
gi|75231239|ref|ZP_00717646.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli B7A]
gi|75234282|ref|ZP_00718670.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
E110019]
gi|157069312|gb|ABV08567.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli HS]
gi|157079434|gb|ABV19142.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli E24377A]
Length = 445
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 194 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNDDPMFKGVLTRDGDYFISVMG 252
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 253 RSDVARKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKQSELLGG 311
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 312 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEI----HKRRPEHAS 367
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 368 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 415
>gi|146312597|ref|YP_001177671.1| N-acetylmuramoyl-L-alanine amidase [Enterobacter sp. 638]
gi|145319473|gb|ABP61620.1| N-acetylmuramoyl-L-alanine amidase [Enterobacter sp. 638]
Length = 291
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 119/237 (50%), Gaps = 12/237 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V++D GHGG D+GA+G NG +EK + LA+A V +++S D ++ TR D F+ L
Sbjct: 60 VMLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRSNGIDARL--TRSGDTFIPLYD 117
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+++ ADLF+SIH + G + + + S MA + REN
Sbjct: 118 RVEIAHQHGADLFMSIHADGFTNPSAA-GASVFALSNRGASSAMAKYLSDREN-----RA 171
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAV 210
D K D ++F+L+Q S+ L I K R H +G + V
Sbjct: 172 DEVAGKKTTDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKRIKPVHRLHSKGTEQAAFVV 231
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVS 267
L ++PSVLVE FI+NP E R LG+ A R ++A+AIA G Y +D + S
Sbjct: 232 LKSPSIPSVLVETSFITNPEEERLLGTTAFRQKIANAIASGVISYFNWFDNQKAHSS 288
>gi|75236178|ref|ZP_00720300.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli F11]
gi|110644526|ref|YP_672256.1| N-acetylmuramoyl-L-alanine amidase amiB precursor [Escherichia coli
536]
gi|117626516|ref|YP_859839.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Escherichia coli
APEC O1]
gi|110346118|gb|ABG72355.1| N-acetylmuramoyl-L-alanine amidase amiB precursor [Escherichia coli
536]
gi|115515640|gb|ABJ03715.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Escherichia coli
APEC O1]
Length = 445
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 194 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNNDPMFKGVLTRDGDYFISVMG 252
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 253 RSDVARKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKQSELLGG 311
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 312 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEI----HKRRPEHAS 367
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 368 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 415
>gi|82777829|ref|YP_404178.1| N-acetylmuramoyl-l-alanine amidase I [Shigella dysenteriae Sd197]
gi|81241977|gb|ABB62687.1| N-acetylmuramoyl-l-alanine amidase I [Shigella dysenteriae Sd197]
Length = 289
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
VV+D GHGG D+GA+G NG +EK + LA+A V ++++ D ++ TR D F+ L
Sbjct: 59 VVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARL--TRSGDTFIPLYD 116
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+K+ ADLF+SIH + G + + + S MA + +REN
Sbjct: 117 RVEIAHKHGADLFMSIHADGFTNPKAA-GASVFALSNRGASSAMAKYLSEREN-----RA 170
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAV 210
D K D ++F+L+Q S+ L I K + H R + V
Sbjct: 171 DEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVV 230
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
L ++PSVLVE FI+NP E R LG+ A R ++A+AIA G Y +D +
Sbjct: 231 LKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQ 282
>gi|75188880|ref|ZP_00702147.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
E24377A]
gi|75198015|ref|ZP_00708085.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli HS]
gi|75255896|ref|ZP_00727628.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli E22]
Length = 444
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 193 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNDDPMFKGVLTRDGDYFISVMG 251
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 252 RSDVARKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKQSELLGG 310
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 311 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEI----HKRRPEHAS 366
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 367 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 414
>gi|16131991|ref|NP_418590.1| N-acetylmuramoyl-l-alanine amidase II [Escherichia coli K12]
gi|74314654|ref|YP_313073.1| N-acetylmuramoyl-l-alanine amidase II [Shigella sonnei Ss046]
gi|89110889|ref|AP_004669.1| N-acetylmuramoyl-l-alanine amidase II [Escherichia coli W3110]
gi|124532518|ref|ZP_01702248.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli B]
gi|399034|sp|P26365|AMIB_ECOLI N-acetylmuramoyl-L-alanine amidase amiB precursor
gi|304914|gb|AAA20097.1| N-acetylmuramoyl-L-alanine amidase
gi|537010|gb|AAA97065.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli]
gi|1790611|gb|AAC77126.1| N-acetylmuramoyl-l-alanine amidase II [Escherichia coli K12]
gi|73858131|gb|AAZ90838.1| N-acetylmuramoyl-l-alanine amidase II [Shigella sonnei Ss046]
gi|85676920|dbj|BAE78170.1| N-acetylmuramoyl-l-alanine amidase II [Escherichia coli W3110]
gi|124498008|gb|EAY45545.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli B]
Length = 445
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 194 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNDDPMFKGVLTRDGDYFISVMG 252
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 253 RSDVARKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKQSELLGG 311
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 312 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEI----HKRRPEHAS 367
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 368 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 415
>gi|71735524|ref|YP_277236.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71556077|gb|AAZ35288.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 412
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 82/243 (33%), Positives = 126/243 (51%), Gaps = 15/243 (6%)
Query: 23 LPLEGQRNRAFT-----VVIDAGHGGHDSGAVGN-GLREKDINLAVA-LRVGRLIKSKHP 75
+P+ Q N+A T VV+DAGHGG D GAVG+ G REKD+ L++A L RL + K
Sbjct: 152 VPVPIQTNKAHTGRDIMVVVDAGHGGKDPGAVGSRGEREKDVVLSIAQLLAKRLKREKGF 211
Query: 76 DVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVM--GHERN 133
DV+++ R DFFV L R E+A+K+NAD+FIS+H ++ R G + + G +
Sbjct: 212 DVRLV--RNDDFFVPLRKRVEFAHKSNADMFISVHADAAPRLTAS-GASVFALSEGGATS 268
Query: 134 SKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGF 193
+ + QREN L+ K DP + ++ ++ N S++L +
Sbjct: 269 ATARFMAQRENGADLLGASSLLNLKDKDPMLAG--VILDMSMNATIAASLQLGHTVLGSL 326
Query: 194 VA-KGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGF 252
H + V+ AVL +PS+LVE GFISN +++ L + + +A + G
Sbjct: 327 EGITTLHQKRVEQAGFAVLKSPDVPSILVETGFISNSRDSQRLVTARHQQAVADGLFDGL 386
Query: 253 ARY 255
RY
Sbjct: 387 QRY 389
>gi|75515408|ref|ZP_00737565.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
53638]
Length = 444
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 193 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNDDPMFKGVLTRDGDYFISVMG 251
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 252 RSDVARKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKQSELLGG 310
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 311 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEI----HKRRPEHAS 366
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 367 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 414
>gi|75227766|ref|ZP_00714495.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli B7A]
Length = 233
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 118/233 (50%), Gaps = 12/233 (5%)
Query: 34 TVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
+ V+D GHGG D+GA+G NG +EK + LA+A V ++++ D ++ TR D F+ L
Sbjct: 2 SFVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARL--TRSGDTFIPLY 59
Query: 93 GRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILME 150
R E A+K+ ADLF+SIH + G + + + S MA + +REN
Sbjct: 60 DRVEIAHKHGADLFMSIHADGFTNPKAA-GASVFALSNRGTSSAMAKYLSEREN-----R 113
Query: 151 KDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLA 209
D K D ++F+L+Q S+ L I K + H R +
Sbjct: 114 ADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFV 173
Query: 210 VLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
VL ++PSVLVE FI+NP E R LG+ A R ++A+AIA G Y +D +
Sbjct: 174 VLKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQ 226
>gi|91213718|ref|YP_543704.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Escherichia coli
UTI89]
gi|91075292|gb|ABE10173.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Escherichia coli
UTI89]
Length = 450
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 199 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNNDPMFKGVLTRDGDYFISVMG 257
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 258 RSDVARKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKQSELLGG 316
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 317 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEI----HKRRPEHAS 372
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 373 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 420
>gi|118579495|ref|YP_900745.1| N-acetylmuramoyl-L-alanine amidase [Pelobacter propionicus DSM
2379]
gi|118502205|gb|ABK98687.1| N-acetylmuramoyl-L-alanine amidase [Pelobacter propionicus DSM
2379]
Length = 432
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 114/228 (50%), Gaps = 21/228 (9%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+V+D GHGGHD GAVG G +EKD+ LA+ L++ L++ + + V+ TR D F+ L
Sbjct: 214 IVLDPGHGGHDPGAVGAGGTQEKDVVLAIGLKLRELLREEL-GLNVVMTRTSDVFIPLEE 272
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R ANK NADLF+SIH N+ G ETY + + K + +EN L
Sbjct: 273 RTAIANKVNADLFLSIHANAAPNHAAS-GIETYYLSLAKTEKAARLAAKENGTTL----- 326
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK--GRH----DRGVKLGN 207
+ S I+F+LM N + S LA +QK K G H + GVK G
Sbjct: 327 -------EKVSVLQAILFDLMANYKLNDSAHLANDVQKALHKKIHGLHADVRNLGVKQGP 379
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VLV + MPS+LVE F+SN E L A ++ A I G Y
Sbjct: 380 FYVLVGATMPSILVETAFVSNVEEEARLKDPAYQEATAEGILEGVRAY 427
>gi|15804758|ref|NP_290799.1| N-acetylmuramoyl-l-alanine amidase II; a murein hydrolase
[Escherichia coli O157:H7 EDL933]
gi|15834399|ref|NP_313172.1| N-acetylmuramoyl-l-alanine amidase II [Escherichia coli O157:H7
str. Sakai]
gi|12519154|gb|AAG59365.1|AE005650_4 N-acetylmuramoyl-l-alanine amidase II; a murein hydrolase
[Escherichia coli O157:H7 EDL933]
gi|13364622|dbj|BAB38568.1| N-acetylmuramoyl-l-alanine amidase II [Escherichia coli O157:H7
str. Sakai]
Length = 445
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 194 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNDDPMFKGVLTRDGDYFISVMG 252
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 253 RSDVARKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKQSELLGG 311
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 312 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEI----HKRRPEHAS 367
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 368 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 415
>gi|15832560|ref|NP_311333.1| N-acetylmuramoyl-l-alanine amidase I [Escherichia coli O157:H7 str.
Sakai]
gi|24113776|ref|NP_708286.1| N-acetylmuramoyl-l-alanine amidase I [Shigella flexneri 2a str.
301]
gi|30063827|ref|NP_837998.1| N-acetylmuramoyl-l-alanine amidase I [Shigella flexneri 2a str.
2457T]
gi|74312970|ref|YP_311389.1| N-acetylmuramoyl-l-alanine amidase I [Shigella sonnei Ss046]
gi|75178035|ref|ZP_00698094.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Shigella boydii BS512]
gi|75187188|ref|ZP_00700455.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
E24377A]
gi|75211405|ref|ZP_00711495.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli B171]
gi|75214744|ref|ZP_00713246.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
E110019]
gi|75233869|ref|ZP_00718332.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
E110019]
gi|75237813|ref|ZP_00721829.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
E110019]
gi|75257247|ref|ZP_00728771.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli E22]
gi|82544894|ref|YP_408841.1| N-acetylmuramoyl-l-alanine amidase I [Shigella boydii Sb227]
gi|83570658|ref|ZP_00922101.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Shigella dysenteriae
1012]
gi|110806376|ref|YP_689896.1| N-acetylmuramoyl-l-alanine amidase I [Shigella flexneri 5 str.
8401]
gi|13362776|dbj|BAB36729.1| N-acetylmuramoyl-l-alanine amidase I [Escherichia coli O157:H7 str.
Sakai]
gi|24052857|gb|AAN43993.1| N-acetylmuramoyl-l-alanine amidase I [Shigella flexneri 2a str.
301]
gi|30042082|gb|AAP17808.1| N-acetylmuramoyl-l-alanine amidase I [Shigella flexneri 2a str.
2457T]
gi|73856447|gb|AAZ89154.1| N-acetylmuramoyl-l-alanine amidase I [Shigella sonnei Ss046]
gi|81246305|gb|ABB67013.1| N-acetylmuramoyl-l-alanine amidase I [Shigella boydii Sb227]
gi|110615924|gb|ABF04591.1| N-acetylmuramoyl-l-alanine amidase I [Shigella flexneri 5 str.
8401]
gi|157078974|gb|ABV18682.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli E24377A]
Length = 289
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
VV+D GHGG D+GA+G NG +EK + LA+A V ++++ D ++ TR D F+ L
Sbjct: 59 VVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARL--TRSGDTFIPLYD 116
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+K+ ADLF+SIH + G + + + S MA + +REN
Sbjct: 117 RVEIAHKHGADLFMSIHADGFTNPKAA-GASVFALSNRGASSAMAKYLSEREN-----RA 170
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAV 210
D K D ++F+L+Q S+ L I K + H R + V
Sbjct: 171 DEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVV 230
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
L ++PSVLVE FI+NP E R LG+ A R ++A+AIA G Y +D +
Sbjct: 231 LKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQ 282
>gi|16130360|ref|NP_416930.1| N-acetylmuramoyl-l-alanine amidase I [Escherichia coli K12]
gi|75515780|ref|ZP_00737915.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
53638]
gi|83586908|ref|ZP_00925539.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
101-1]
gi|89109249|ref|AP_003029.1| N-acetylmuramoyl-l-alanine amidase I [Escherichia coli W3110]
gi|124531849|ref|ZP_01701956.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli B]
gi|543803|sp|P36548|AMIA_ECOLI Probable N-acetylmuramoyl-L-alanine amidase amiA precursor
gi|453968|emb|CAA53166.1| unnamed protein product [Escherichia coli]
gi|1788776|gb|AAC75488.1| N-acetylmuramoyl-l-alanine amidase I [Escherichia coli K12]
gi|1799865|dbj|BAA16318.1| N-acetylmuramoyl-l-alanine amidase I [Escherichia coli W3110]
gi|124498332|gb|EAY45849.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli B]
Length = 289
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
VV+D GHGG D+GA+G NG +EK + LA+A V ++++ D ++ TR D F+ L
Sbjct: 59 VVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARL--TRSGDTFIPLYD 116
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+K+ ADLF+SIH + G + + + S MA + +REN
Sbjct: 117 RVEIAHKHGADLFMSIHADGFTNPKAA-GASVFALSNRGASSAMAKYLSEREN-----RA 170
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAV 210
D K D ++F+L+Q S+ L I K + H R + V
Sbjct: 171 DEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVV 230
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
L ++PSVLVE FI+NP E R LG+ A R ++A+AIA G Y +D +
Sbjct: 231 LKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQ 282
>gi|115421826|emb|CAJ48344.1| N-acetylmuramoyl-L-alanine amidase [Bordetella avium 197N]
Length = 419
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 116/231 (50%), Gaps = 11/231 (4%)
Query: 29 RNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDF 87
R R T+ +D GHGG D GA+G +GLREKD+ L +A R+ LI ++ P ++ TR+ D+
Sbjct: 182 RRRMLTIALDPGHGGEDPGAIGASGLREKDVVLRIARRLKALIDAQ-PAMRAYLTRDDDY 240
Query: 88 FVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENA 145
FV L R + A + ADLF+SIH ++ + G+ + + S A + +ENA
Sbjct: 241 FVPLNVRVQKARRVRADLFVSIHADAWVKPTAN-GSSVFALSERGASSTQARWMADKENA 299
Query: 146 VILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVK 204
L+ V G R + ++ +L S+K+ + R H V+
Sbjct: 300 ADLIGG----VNLGSHDRQV-AKVLLDLSTTAQISDSLKVGSAFLEEIKKINRLHKNSVE 354
Query: 205 LGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
AVL +PS+LVE FISNP E L S A D+LA A+ G RY
Sbjct: 355 QAGFAVLKAPDIPSILVETAFISNPQEEAKLRSNAHLDKLAQAMMTGIDRY 405
>gi|82779449|ref|YP_405798.1| N-acetylmuramoyl-l-alanine amidase II [Shigella dysenteriae Sd197]
gi|81243597|gb|ABB64307.1| N-acetylmuramoyl-l-alanine amidase II [Shigella dysenteriae Sd197]
Length = 445
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 194 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNDDPMFKGVLTRDGDYFISVMG 252
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 253 RSDVARKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKQSELLGG 311
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 312 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEI----HKRRPEHAS 367
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 368 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 415
>gi|75179460|ref|ZP_00699464.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Shigella boydii BS512]
Length = 445
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 194 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNDDPMFKGVLTRDGDYFISVMG 252
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 253 RSDVARKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKHSELLGG 311
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 312 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEI----HKRRPEHAS 367
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 368 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 415
>gi|83585093|ref|ZP_00923746.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
101-1]
Length = 437
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 186 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNDDPMFKGVLTRDGDYFISVMG 244
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 245 RSDVARKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKQSELLGG 303
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 304 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEI----HKRRPEHAS 359
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 360 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 407
>gi|82546590|ref|YP_410537.1| N-acetylmuramoyl-l-alanine amidase II [Shigella boydii Sb227]
gi|81248001|gb|ABB68709.1| N-acetylmuramoyl-l-alanine amidase II [Shigella boydii Sb227]
Length = 445
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 194 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNDDPMFKGVLTRDGDYFISVMG 252
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 253 RSDVARKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMASWLEQHEKHSELLGG 311
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQK-GFVAKGRHDRGVKLGN 207
+ DP S++ + F Q D + + Q+Q+ G + H R + +
Sbjct: 312 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEI----HKRRPEHAS 367
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
L VL +PSVLVE GFISN +E R L S+ + +LA AI +G Y
Sbjct: 368 LGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNY 415
>gi|26248811|ref|NP_754851.1| Probable N-acetylmuramoyl-L-alanine amidase amiA precursor
[Escherichia coli CFT073]
gi|75240093|ref|ZP_00724052.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli F11]
gi|110642616|ref|YP_670346.1| probable N-acetylmuramoyl-L-alanine amidase [Escherichia coli 536]
gi|26109217|gb|AAN81419.1|AE016764_101 Probable N-acetylmuramoyl-L-alanine amidase amiA precursor
[Escherichia coli CFT073]
gi|110344208|gb|ABG70445.1| probable N-acetylmuramoyl-L-alanine amidase [Escherichia coli 536]
Length = 289
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
VV+D GHGG D+GA+G NG +EK + LA+A V ++++ D ++ TR D F+ L
Sbjct: 59 VVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARL--TRSGDTFIPLYD 116
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+K+ ADLF+SIH + G + + + S MA + +REN
Sbjct: 117 RVEIAHKHGADLFMSIHADGFTNPKAA-GASVFALSNRGASSAMAKYLSEREN-----RA 170
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAV 210
D K D ++F+L+Q S+ L I K + H R + V
Sbjct: 171 DEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVV 230
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
L ++PSVLVE FI+NP E R LG+ A R ++A+AIA G Y +D +
Sbjct: 231 LKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQ 282
>gi|91211773|ref|YP_541759.1| probable N-acetylmuramoyl-L-alanine amidase AmiA precursor
[Escherichia coli UTI89]
gi|117624640|ref|YP_853553.1| putative N-acetylmuramoyl-L-alanine amidase AmiA precursor
[Escherichia coli APEC O1]
gi|91073347|gb|ABE08228.1| probable N-acetylmuramoyl-L-alanine amidase AmiA precursor
[Escherichia coli UTI89]
gi|115513764|gb|ABJ01839.1| putative N-acetylmuramoyl-L-alanine amidase AmiA precursor
[Escherichia coli APEC O1]
Length = 289
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
VV+D GHGG D+GA+G NG +EK + LA+A V ++++ D ++ TR D F+ L
Sbjct: 59 VVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARL--TRSGDTFIPLYD 116
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+K+ ADLF+SIH + G + + + S MA + +REN
Sbjct: 117 RVEIAHKHGADLFMSIHADGFTNPKAA-GASVFALSNRGASSAMAKYLSEREN-----RA 170
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAV 210
D K D ++F+L+Q S+ L I K + H R + V
Sbjct: 171 DEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVV 230
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
L ++PSVLVE FI+NP E R LG+ A R ++A+AIA G Y +D +
Sbjct: 231 LKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQ 282
>gi|134300120|ref|YP_001113616.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum reducens MI-1]
gi|134052820|gb|ABO50791.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum reducens MI-1]
Length = 253
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 48/220 (21%)
Query: 35 VVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGR 94
+ +D GHGG D GA+GNGL+EKDI L +A ++ + + + DV V TR+ D FV+L R
Sbjct: 6 ICLDPGHGGQDPGALGNGLQEKDITLEIAKKIIQRLAAY--DVTVKSTRDSDTFVSLSQR 63
Query: 95 AEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDYR 154
A YAN NAD F+SIH+N+ GG G E+++ E +S + Q + I+ +
Sbjct: 64 AAYANNVNADYFVSIHINAG----GGTGFESFIYNGEVSSTTIKTRQVLHDTIMAD---- 115
Query: 155 TVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNLAVLVFS 214
MQ Y DRG K N AV+ +
Sbjct: 116 -------------------MQKYYMI-------------------DRGKKAANFAVIRET 137
Query: 215 AMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFAR 254
MP++L E FI NP +A L + ++L++AI G +
Sbjct: 138 NMPAILTENLFIDNPKDASLLKNTDFINDLSTAITHGLVK 177
>gi|15645391|ref|NP_207565.1| N-acetylmuramoyl-L-alanine amidase (amiA) [Helicobacter pylori
26695]
gi|2313899|gb|AAD07820.1| N-acetylmuramoyl-L-alanine amidase (amiA) [Helicobacter pylori
26695]
Length = 440
Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 121/230 (52%), Gaps = 22/230 (9%)
Query: 35 VVIDAGHGGHDSGAV-GNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+V+DAGHGG D GA+ N + EKDI L V + + +K + D VL TR+KD ++ L+
Sbjct: 219 IVLDAGHGGKDCGAMSANLVCEKDIVLEVVKFLHKELKKR--DYSVLLTRDKDIYIDLVA 276
Query: 94 RAEYANKNNADLFISIHVNS--QERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEK 151
R E ANK +ADLFIS+H NS + +G ETY + R+ + V ++EN +
Sbjct: 277 RTELANKKSADLFISVHANSIPKHSTSNAHGIETYFLSTARSERARKVAEQENKDDVNLM 336
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH------DRGVKL 205
DY + + +++ I+ S KLA +Q G + R D GV+
Sbjct: 337 DYFSKSLFLNSLNTQRLIV-----------SNKLAIDVQYGMLQSVRKNYPDVVDGGVRE 385
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
G VL + MPS+L+E+G+ S+ E++ + S+ + LA IA G +
Sbjct: 386 GPFWVLAGALMPSILIEIGYNSHAIESKRIQSKPYQKILAKGIADGIDSF 435
>gi|75196449|ref|ZP_00706519.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli HS]
gi|157067582|gb|ABV06837.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli HS]
Length = 289
Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
VV+D GHGG D+GA+G NG +EK + LA+A V ++++ D ++ TR D F+ L
Sbjct: 59 VVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARL--TRSGDTFIPLYD 116
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+K+ ADLF+SIH + G + + + S MA + +REN
Sbjct: 117 RVEIAHKHGADLFMSIHADGFTNPKAS-GASVFALSNRGASSAMAKYLSEREN-----RA 170
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAV 210
D K D ++F+L+Q S+ L I K + H R + V
Sbjct: 171 DEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVV 230
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
L ++PSVLVE FI+NP E R LG+ A R ++A+AIA G Y +D +
Sbjct: 231 LKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQ 282
>gi|94987465|ref|YP_595398.1| N-acetylmuramoyl-L-alanine amidase [Lawsonia intracellularis
PHE/MN1-00]
gi|94731714|emb|CAJ55077.1| N-acetylmuramoyl-L-alanine amidase [Lawsonia intracellularis
PHE/MN1-00]
Length = 600
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 34 TVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
T++IDAGHGG D GA NG+ E ++ L ++ ++G+++ +K V YTR+ + +V L
Sbjct: 381 TILIDAGHGGKDPGATHNGIIESELTLELSKKLGQILAAK--GFTVHYTRQNNTWVALEA 438
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R+ A ADL ISIH+N+ + +G ETY +G R+ ++ + + EN+ EK
Sbjct: 439 RSRKATTVKADLMISIHINANKNTQ-IHGLETYYLGLARSKESTYIARIENST--SEKTL 495
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK------GRHDRGVKLGN 207
+ ++ ++M + + +S +LA+ + + + H+ G+K
Sbjct: 496 NDL----------DILLKDVMLTSKKHESRRLAESVHQNILTHLIQKNYNTHNGGIKSAP 545
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VL+ +PS+LVE+G+ SN AEA+ L S + L +A+G Y
Sbjct: 546 FHVLIGPKIPSILVEVGYCSNKAEAQRLASSNYQKALIEGLAKGIFCY 593
>gi|85058312|ref|YP_454014.1| N-acetylmuramoyl-l-alanine amidase II [Sodalis glossinidius str.
'morsitans']
gi|84778832|dbj|BAE73609.1| N-acetylmuramoyl-l-alanine amidase II [Sodalis glossinidius str.
'morsitans']
Length = 454
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 88/277 (31%), Positives = 138/277 (49%), Gaps = 28/277 (10%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D GA+G NGL EK++ +A+A ++ L+ + K + TR+ D+F+++MG
Sbjct: 197 VAIDAGHGGQDPGAMGPNGLYEKNVTIAIARKLKTLLDAD-AMFKPVLTRDGDYFISVMG 255
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILM-- 149
R++ A K A + +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 256 RSDVARKKGASVLVSIHADAAP-NRSASGASVWVLSNRRANSEMANWLEQHEKQSELLGG 314
Query: 150 EKDYRTVYKGFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGN 207
D + + P S++ + F Q D ++K+ Q+Q+ H R + +
Sbjct: 315 AGDLLANSQAY-PYLSQAVLDLQFGHSQRVGYDIAVKVLGQLQR---VGTLHKRRPEHAS 370
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVS 267
VL +PS+LVE GFISN E R LGS A +D++A+A+ G Y + ++G
Sbjct: 371 FGVLRSPDIPSLLVETGFISNTREERLLGSSAYQDKIANALYLGLRAYFLAHPLQTGSKL 430
Query: 268 EPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAP 304
E PQ G+SS AD S AP
Sbjct: 431 ENRPQ---------------GVSSAADAGALAPSSAP 452
>gi|153875540|ref|ZP_02003294.1| Cell wall hydrolase/autolysin [Beggiatoa sp. PS]
gi|152067995|gb|EDN66705.1| Cell wall hydrolase/autolysin [Beggiatoa sp. PS]
Length = 308
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 12/236 (5%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
+ R + IDAGHGG DSGA+G NG +EK++ LA+A + L+ ++ ++ L R D
Sbjct: 73 EHQRDIVIAIDAGHGGIDSGALGPNGTQEKEVVLAIAKELAALVATER-GMRALLIRNDD 131
Query: 87 FFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQREN 144
+F+ L R E A + ADLFIS+H ++ + G+ Y++ S A + ++EN
Sbjct: 132 YFIKLRKRIELARRYQADLFISVHADAYPEDNNVQGSSVYMLSRLGVSSEQAKWLAEKEN 191
Query: 145 AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQK--GFVAKGRHDRG 202
+ L+ D + ++ +L Q + S +AQ++ K G V+K H R
Sbjct: 192 SADLIGGVTLN-----DKDDLLAQVLLDLSQAGTLEASAYVAQKVLKALGQVSKA-HSRR 245
Query: 203 VKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKED 258
V+ VL +PS+LVE GFISNP E L + R +A+AI G +Y D
Sbjct: 246 VQRAGFMVLRSPDIPSILVETGFISNPQEEEKLSNPTYRRRIAAAILEGIRQYFAD 301
>gi|157081836|gb|ABV11514.1| hypothetical protein CKO_00351 [Citrobacter koseri ATCC BAA-895]
Length = 289
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 117/232 (50%), Gaps = 12/232 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
VV+D GHGG D+GA+G NG +EK + L +A V +++++ D ++ TR D F+ L
Sbjct: 59 VVLDPGHGGIDTGAIGRNGSKEKHVVLEIAKNVRAILRNQGIDARL--TRTGDTFIPLYD 116
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+K+ ADLF+SIH + G + + + S MA + REN
Sbjct: 117 RVEIAHKHGADLFMSIHADGFTNPSAA-GASVFALSNRGASSAMAKYLSDREN-----RA 170
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAV 210
D K D ++F+L+Q S+ L I K R H R + V
Sbjct: 171 DEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHRLHSRNTEQAAFVV 230
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
L ++PSVLVE FI+NP E R LG+ A R ++A+AIA G Y +D +
Sbjct: 231 LKSPSIPSVLVETSFITNPEEERLLGTTAFRQKIATAIANGVISYFHWFDNQ 282
>gi|78776921|ref|YP_393236.1| N-acetylmuramoyl-L-alanine amidase [Thiomicrospira denitrificans
ATCC 33889]
gi|78497461|gb|ABB44001.1| N-acetylmuramoyl-L-alanine amidase [Thiomicrospira denitrificans
ATCC 33889]
Length = 469
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 117/231 (50%), Gaps = 22/231 (9%)
Query: 34 TVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
T+VID GHGG D GA+G+ G REK I ++ + +++ + KVL TR+ D FV L
Sbjct: 248 TIVIDPGHGGTDPGAIGHKGYREKIIVFNISKELENILRVR--GYKVLMTRKDDTFVKLS 305
Query: 93 GRAEYANKNNADLFISIHVNS--QERGHGGYGTETYVMGHERNSKNMAVVQRENAVILME 150
R E+AN AD+F+SIH N+ +G E Y + R+ + +EN+ + +
Sbjct: 306 KRTEFANDKKADIFVSIHANAVPAANAQNVHGIECYFLSPSRSERAKKAAAQENSADMSD 365
Query: 151 KDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA------KGRHDRGVK 204
+ +SY+ L+ + S KLA +Q+G + D GV+
Sbjct: 366 MNMY---------GKDSYL--NLLNHHNILASNKLAIDLQRGMLGLLNQKYSDVKDGGVR 414
Query: 205 LGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
G VLV + MPSVLVE+GFIS+P EA L S +A +A G RY
Sbjct: 415 EGPFWVLVGAQMPSVLVEVGFISHPKEAERLVSNDYIKLIARGLADGIERY 465
>gi|118067913|ref|ZP_01536168.1| cell wall hydrolase/autolysin [Serratia proteamaculans 568]
gi|118018035|gb|EAV31952.1| cell wall hydrolase/autolysin [Serratia proteamaculans 568]
Length = 299
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 85/237 (35%), Positives = 123/237 (51%), Gaps = 11/237 (4%)
Query: 35 VVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V+ID GHGG DSGAVG+ G +EK + L +A V R++ + V+V TRE+D F+ L
Sbjct: 70 VMIDPGHGGIDSGAVGSEGSQEKHVVLEIANHVRRILHEQE-HVEVRLTREEDEFIPLFQ 128
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+++ ADLFISIH + G + + + S MA + RENA +
Sbjct: 129 RVEIAHQHQADLFISIHADGFTSPEAS-GASVFALSNRGASSAMARYLSNRENAA---DD 184
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGF-VAKGRHDRGVKLGNLAV 210
YK D + ++F+L+Q + S+ L + + H + AV
Sbjct: 185 VAGGKYKNQDNYLQQ--VLFDLVQTDTINNSLTLGRHVLGQIRPVHHLHSNSTEQAAFAV 242
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVS 267
L ++PSVLVE FI+NPAE R LG+ A R+++A AIA G + YD K S
Sbjct: 243 LKSPSIPSVLVETSFITNPAEERLLGTTAFREKIARAIADGVISFFSYYDSHQRKPS 299
>gi|16763177|ref|NP_458794.1| N-acetylmuramoyl-L-alanine amidase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29144656|ref|NP_807998.1| N-acetylmuramoyl-L-alanine amidase [Salmonella enterica subsp.
enterica serovar Typhi Ty2]
gi|25349215|pir||AF1048 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16505485|emb|CAD06835.1| N-acetylmuramoyl-L-alanine amidase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29140295|gb|AAO71858.1| N-acetylmuramoyl-L-alanine amidase [Salmonella enterica subsp.
enterica serovar Typhi Ty2]
Length = 439
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 79/250 (31%), Positives = 127/250 (50%), Gaps = 13/250 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 188 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNNDPMFKGVLTRDGDYFISVMG 246
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILM-- 149
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 247 RSDVARKQNANFLVSIHADAAP-NRDATGASVWVLSNRRANSEMANWLEQHEKQSELLGG 305
Query: 150 EKDYRTVYKGFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGN 207
D T + DP S++ + F Q D + + Q+ H R + +
Sbjct: 306 AGDVLTNSQS-DPYLSQAVLDLQFGHSQRVGYDVATNVLSQLDG---VGSLHKRRPEHAS 361
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVS 267
L VL +PS+LVE GFISN E R L S+ + ++A AI RG +Y + +S
Sbjct: 362 LGVLRSPDIPSILVETGFISNHGEERLLASDRYQQQIADAIYRGLRKYFAAHPIQSAPQG 421
Query: 268 EPAPQATEEE 277
P A+ +
Sbjct: 422 SPGQTASTNQ 431
>gi|21231737|ref|NP_637654.1| N-acetylmuramoyl-L-alanine amidase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66768137|ref|YP_242899.1| N-acetylmuramoyl-L-alanine amidase [Xanthomonas campestris pv.
campestris str. 8004]
gi|21113441|gb|AAM41578.1| N-acetylmuramoyl-L-alanine amidase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573469|gb|AAY48879.1| N-acetylmuramoyl-L-alanine amidase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 563
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 118/242 (48%), Gaps = 23/242 (9%)
Query: 23 LPLEGQR------NRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHP 75
LP E R R V ID GHGG D GA+G G REKD+ LA+ + R I +
Sbjct: 297 LPSEASRVKMAPGMRPLVVAIDPGHGGQDPGAMGPTGKREKDVTLAIGRELARQINATQ- 355
Query: 76 DVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSK 135
+K TR+ D F+ L RA+ A AD+FISIH ++ E G+ YV+ + S
Sbjct: 356 GMKAYMTRDTDVFIPLPMRAQKARSAKADIFISIHADAAE-NRSATGSSVYVLSTKGASS 414
Query: 136 NMA--VVQRENAVILMEKDYRTVYKGFDPRSSESY---IMFELMQNTYQDQSIKLAQQIQ 190
A + +ENA L+ G + +ES ++ +L Q+ + S A +
Sbjct: 415 QRARWLADKENAADLV--------GGVRLQQTESTLANVLLDLAQSGHMKASEDAAGHVL 466
Query: 191 KGFVAKGR-HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIA 249
G G H ++ N AVL S MP++LVE FISNP E R L + + ++ASA+
Sbjct: 467 GGLKRIGNNHKPQLERANFAVLRTSDMPAMLVETAFISNPDEERRLIDPSYQRKIASAVL 526
Query: 250 RG 251
G
Sbjct: 527 DG 528
>gi|156933011|ref|YP_001436927.1| hypothetical protein ESA_00814 [Enterobacter sakazakii ATCC
BAA-894]
gi|156531265|gb|ABU76091.1| hypothetical protein ESA_00814 [Enterobacter sakazakii ATCC
BAA-894]
Length = 291
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 120/233 (51%), Gaps = 18/233 (7%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V++D GHGG D+GA+G NG +EK + LA+A V ++++ D K+ TR D F+ L
Sbjct: 61 VMLDPGHGGIDTGAIGHNGSKEKHVVLAIAKNVRAILRAHGIDAKL--TRSNDTFIPLYD 118
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+K+ ADLF+SIH + G + + + S MA + +RENA
Sbjct: 119 RVEIAHKHGADLFMSIHADGFTSPSAA-GASVFALSNRGASSAMAKYLSERENAA----- 172
Query: 152 DYRTVYKGFDPRSSESY---IMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGN 207
G ++ + Y ++F+L+Q S+ L I + R H R +
Sbjct: 173 ---DDVAGSKVKNKDHYLQQVLFDLVQTDTIKNSLTLGSHILRQIKPVHRLHSRNTEQAA 229
Query: 208 LAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYD 260
VL ++PSVLVE FI+NP E + LG+ A R ++A+AIA G Y +D
Sbjct: 230 FVVLKSPSIPSVLVETSFITNPQEEKLLGTAAFRQKIATAIANGVISYFNWFD 282
>gi|28872633|ref|NP_795252.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Pseudomonas syringae
pv. tomato str. DC3000]
gi|28855889|gb|AAO58947.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 407
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 79/235 (33%), Positives = 121/235 (51%), Gaps = 10/235 (4%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVA-LRVGRLIKSKHPDVKVLYTR 83
+ + R VV+DAGHGG D GAVG+ G REKD+ L++A L RL + K DV+++ R
Sbjct: 155 KARTGRDIMVVVDAGHGGKDPGAVGSRGEREKDVVLSIAQLLAKRLKREKGFDVRLV--R 212
Query: 84 EKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVM--GHERNSKNMAVVQ 141
DFFV L R E+A+K+NAD+FIS+H ++ R G + + G ++ + Q
Sbjct: 213 NDDFFVPLRKRVEFAHKSNADMFISVHADAAPRLTAS-GASVFALSEGGATSATARFMAQ 271
Query: 142 RENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA-KGRHD 200
REN L+ K DP + ++ ++ N S++L I H
Sbjct: 272 RENGADLLGATSLLNLKDKDPMLAG--VILDMSMNATIAASLQLGHTILGSLEGITTLHQ 329
Query: 201 RGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ V+ AVL +PS+LVE GFISN +++ L + + +A + G RY
Sbjct: 330 KRVEQAGFAVLKSPDVPSILVETGFISNSRDSQRLVTARHQQAVADGLFDGLQRY 384
>gi|15802966|ref|NP_288996.1| N-acetylmuramoyl-l-alanine amidase I [Escherichia coli O157:H7
EDL933]
gi|12516816|gb|AAG57553.1|AE005474_1 N-acetylmuramoyl-l-alanine amidase I [Escherichia coli O157:H7
EDL933]
Length = 289
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 117/232 (50%), Gaps = 12/232 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
VV D GHGG D+GA+G NG +EK + LA+A V ++++ D ++ TR D F+ L
Sbjct: 59 VVXDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARL--TRSGDTFIPLYD 116
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+K+ ADLF+SIH + G + + + S MA + +REN
Sbjct: 117 RVEIAHKHGADLFMSIHADGFTNPKAA-GASVFALSNRGASSAMAKYLSEREN-----RA 170
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAV 210
D K D ++F+L+Q S+ L I K + H R + V
Sbjct: 171 DEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVV 230
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
L ++PSVLVE FI+NP E R LG+ A R ++A+AIA G Y +D +
Sbjct: 231 LKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQ 282
>gi|73540290|ref|YP_294810.1| N-acetylmuramoyl-L-alanine amidase [Ralstonia eutropha JMP134]
gi|72117703|gb|AAZ59966.1| N-acetylmuramoyl-L-alanine amidase [Ralstonia eutropha JMP134]
Length = 499
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 12/229 (5%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R TV ID GHGG D GA+G +G REKD+ L +A R+ I ++ P+++ + TR+ DFFV
Sbjct: 266 RLLTVAIDPGHGGEDPGAIGASGSREKDVVLQIAHRLRAKIDAQ-PNMRAMMTRDADFFV 324
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVI 147
L R + A + ADLF+SIH ++ G + + S A + +EN+
Sbjct: 325 PLNVRVQKARRVQADLFVSIHADAFLSPEAK-GASVFALSERGASSTAARWLANKENSSD 383
Query: 148 LMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLG 206
L+ + + + ++ +L + S+++ + + + R H V+
Sbjct: 384 LIGG------ANLNKDAQVARVLLDLSTTAQINDSLQVGKAVLQEIGGINRLHKGSVEQA 437
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
AVL +PS+LVE FISNP E R L ++ +++LA+AI RG Y
Sbjct: 438 GFAVLKAPDIPSILVETAFISNPEEERKLNDDSHQEQLANAILRGIRSY 486
>gi|114704662|ref|ZP_01437570.1| n-acetylmuramoyl-l-alanine amidase protein [Fulvimarina pelagi
HTCC2506]
gi|114539447|gb|EAU42567.1| n-acetylmuramoyl-l-alanine amidase protein [Fulvimarina pelagi
HTCC2506]
Length = 398
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 125/236 (52%), Gaps = 19/236 (8%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
++ FT+VID GHGG D+GA+ +G+ EKDINLA A + R + ++P ++V+ TREKD
Sbjct: 167 KQQPGFTIVIDPGHGGDDNGAIAKSGVMEKDINLAAA-KTLRNVLEENPGIRVVLTREKD 225
Query: 87 FFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMG-HERNSKNMAVVQRENA 145
FV LM R E A NA+LFIS+H +S R G Y + +S ++ + ENA
Sbjct: 226 EFVGLMERTEIARHENANLFISLHADSI-RYKDLRGATIYTLSDRASDSLSLEIAANENA 284
Query: 146 VILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRHD--RGV 203
G + + E +F+++ + + +++ ++ +A+ R R +
Sbjct: 285 ADRF---------GGEEYAKEVPEVFDILADLTRRETVSYSEHFASSLLARMRKSDIRFI 335
Query: 204 K--LGNLAVLVFSA--MPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
K + A +V A +PSVLVELGF+SN +AR L E R E + +A +
Sbjct: 336 KNPKRSAAFIVLKAPDVPSVLVELGFMSNVEDARLLADETWRTETMTVMAEAIVAF 391
>gi|116690583|ref|YP_836206.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia cenocepacia
HI2424]
gi|116648672|gb|ABK09313.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia cenocepacia
HI2424]
Length = 504
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 82/243 (33%), Positives = 116/243 (47%), Gaps = 29/243 (11%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
+G R TV ID GHGG D GA+G NG EK I L +A ++ I + P+++ + TR+
Sbjct: 265 KGGTVRLLTVAIDPGHGGEDPGAIGGNGTYEKHIALDIAKKLRAKIDAA-PNMRAMMTRD 323
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNS----QERG--------HGGYGTETYVMGHER 132
DFFV L R + A + ADLF+SIH ++ RG HG M ++
Sbjct: 324 ADFFVPLNVRVQKARRVGADLFVSIHADAFTTPSARGSSVFALSDHGATSAAARWMANKE 383
Query: 133 NSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKG 192
NS ++ + + D FD S+ + I L Y + + ++ KG
Sbjct: 384 NSSDLI-----GGINIKTADAAVNRALFD-MSTTAQIRDSLRYGNYVLKEVGGINKLHKG 437
Query: 193 FVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGF 252
V+ AVL +PS+LVE FISNP E R L ++ RDE+A AI RG
Sbjct: 438 ---------SVEQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDSYRDEMADAIFRGI 488
Query: 253 ARY 255
RY
Sbjct: 489 KRY 491
>gi|56412664|ref|YP_149739.1| probable N-acetylmuramoyl-L-alanine amidase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|56126921|gb|AAV76427.1| probable N-acetylmuramoyl-L-alanine amidase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
Length = 289
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V++D GHGG D+GA+G NG +EK + LA+A V ++++ D ++ TR D F+ L
Sbjct: 59 VMLDPGHGGIDTGAIGRNGSQEKHVVLAIAKNVRAILRNHGIDARL--TRTGDTFIPLYD 116
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+K+ ADLF+SIH + G + + + S MA + +REN
Sbjct: 117 RVEIAHKHGADLFMSIHADGFTNPKAA-GASVFALSNRGASSAMAKYLSEREN-----RA 170
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAV 210
D K D ++F+L+Q S+ L I K + H R + V
Sbjct: 171 DEVAGKKATDRDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKTIHKLHSRTTEQAAFVV 230
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
L ++PSVLVE FI+NP E R LG+ A R ++A+AIA G Y +D +
Sbjct: 231 LKSPSIPSVLVETSFITNPEEERLLGTTAFRQKIATAIANGIISYFHWFDNQ 282
>gi|107023501|ref|YP_621828.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia cenocepacia AU
1054]
gi|105893690|gb|ABF76855.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia cenocepacia AU
1054]
Length = 503
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 82/243 (33%), Positives = 116/243 (47%), Gaps = 29/243 (11%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
+G R TV ID GHGG D GA+G NG EK I L +A ++ I + P+++ + TR+
Sbjct: 264 KGGTVRLLTVAIDPGHGGEDPGAIGGNGTYEKHIALDIAKKLRAKIDAA-PNMRAMMTRD 322
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNS----QERG--------HGGYGTETYVMGHER 132
DFFV L R + A + ADLF+SIH ++ RG HG M ++
Sbjct: 323 ADFFVPLNVRVQKARRVGADLFVSIHADAFTTPSARGSSVFALSDHGATSAAARWMANKE 382
Query: 133 NSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKG 192
NS ++ + + D FD S+ + I L Y + + ++ KG
Sbjct: 383 NSSDLI-----GGINIKTADAAVNRALFD-MSTTAQIRDSLRYGNYVLKEVGGINKLHKG 436
Query: 193 FVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGF 252
V+ AVL +PS+LVE FISNP E R L ++ RDE+A AI RG
Sbjct: 437 ---------SVEQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDSYRDEMADAIFRGI 487
Query: 253 ARY 255
RY
Sbjct: 488 KRY 490
>gi|16765770|ref|NP_461385.1| N-acetylmuramoyl-l-alanine amidase I [Salmonella typhimurium LT2]
gi|465499|sp|P33772|AMIA_SALTY Probable N-acetylmuramoyl-L-alanine amidase amiA precursor
gi|310641|gb|AAA27138.1| possible amidase
gi|16420990|gb|AAL21344.1| N-acetylmuramoyl-l-alanine amidase I [Salmonella typhimurium LT2]
Length = 289
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V++D GHGG D+GA+G NG +EK + LA+A V ++++ D ++ TR D F+ L
Sbjct: 59 VMLDPGHGGIDTGAIGRNGSQEKHVVLAIAKNVRAILRNHGIDARL--TRTGDTFIPLYD 116
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+K+ ADLF+SIH + G + + + S MA + +REN
Sbjct: 117 RVEIAHKHGADLFMSIHADGFTNPKAA-GASVFALSNRGASSAMAKYLSEREN-----RA 170
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAV 210
D K D ++F+L+Q S+ L I K + H R + V
Sbjct: 171 DEVAGKKATDRDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPIHKLHSRTTEQAAFVV 230
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
L ++PSVLVE FI+NP E R LG+ A R ++A+AIA G Y +D +
Sbjct: 231 LKSPSIPSVLVETSFITNPEEERLLGTTAFRQKIATAIANGIISYFHWFDNQ 282
>gi|33591487|ref|NP_879131.1| N-acetylmuramoyl-L-alanine amidase [Bordetella pertussis Tohama I]
gi|33598137|ref|NP_885780.1| N-acetylmuramoyl-L-alanine amidase [Bordetella parapertussis 12822]
gi|33603030|ref|NP_890590.1| N-acetylmuramoyl-L-alanine amidase [Bordetella bronchiseptica RB50]
gi|33566695|emb|CAE38905.1| N-acetylmuramoyl-L-alanine amidase [Bordetella parapertussis]
gi|33568661|emb|CAE34419.1| N-acetylmuramoyl-L-alanine amidase [Bordetella bronchiseptica RB50]
gi|33571129|emb|CAE40626.1| N-acetylmuramoyl-L-alanine amidase [Bordetella pertussis Tohama I]
Length = 414
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 121/240 (50%), Gaps = 14/240 (5%)
Query: 23 LPLEGQ---RNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVK 78
LP G+ R R T+ +D GHGG D GA+G +GLREKD+ L +A R+ LI ++ P ++
Sbjct: 168 LPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQ-PYMR 226
Query: 79 VLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA 138
TR+ D+FV L R + A + ADLF+SIH ++ + G+ + + S A
Sbjct: 227 AYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTAN-GSSVFALSERGASSTQA 285
Query: 139 --VVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK 196
+ +ENA L+ V G R + ++ +L + S+K+
Sbjct: 286 RWLADKENAADLIGG----VNLGSHDRQV-AKVLLDLSTTAQINDSLKVGSAFLDEIKKI 340
Query: 197 GR-HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
R H V+ AVL +PS+LVE FISNP E L S A +++LA A+ G RY
Sbjct: 341 NRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRY 400
>gi|147677121|ref|YP_001211336.1| hypothetical protein PTH_0786 [Pelotomaculum thermopropionicum SI]
gi|146273218|dbj|BAF58967.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
Length = 587
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 108/222 (48%), Gaps = 42/222 (18%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ +DAGHG D GA+G G +EKDI L VA + +L++S+ KV+ TR D L
Sbjct: 394 IAVDAGHGSPDPGAIGPKGTKEKDITLDVAKKAAKLLESR--GAKVVMTRPGDKETGLYE 451
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
RA ANK AD+F+SIH+N+ G GT TY+ A VQ
Sbjct: 452 RAGMANKAGADVFVSIHINANHDPALG-GTSTYIYSGSSEPGQAARVQ------------ 498
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNLAVLVF 213
+ R +Y+ EL++ G D GV+ + AVL
Sbjct: 499 -------ESRRLANYVQSELLKTL-------------------GLRDAGVREADFAVLRT 532
Query: 214 SAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ MP+VL+EL FISNPAE + + +++ R++ A AI +G Y
Sbjct: 533 TNMPAVLIELAFISNPAEEKLMNTDSFRNKAAEAIVKGIGLY 574
>gi|16761368|ref|NP_456985.1| probable N-acetylmuramoyl-L-alanine amidase [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|29140935|ref|NP_804277.1| probable N-acetylmuramoyl-L-alanine amidase [Salmonella enterica
subsp. enterica serovar Typhi Ty2]
gi|62181019|ref|YP_217436.1| N-acetylmuramoyl-l-alanine amidase I [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|25358150|pir||AG0812 probable N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
[imported] - Salmonella enterica subsp. enterica serovar
Typhi (strain CT18)
gi|16503667|emb|CAD07681.1| probable N-acetylmuramoyl-L-alanine amidase [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29136560|gb|AAO68126.1| probable N-acetylmuramoyl-L-alanine amidase [Salmonella enterica
subsp. enterica serovar Typhi Ty2]
gi|62128652|gb|AAX66355.1| N-acetylmuramoyl-l-alanine amidase I [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 289
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V++D GHGG D+GA+G NG +EK + LA+A V ++++ D ++ TR D F+ L
Sbjct: 59 VMLDPGHGGIDTGAIGRNGSQEKHVVLAIAKNVRAILRNHGIDARL--TRTGDTFIPLYD 116
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+K+ ADLF+SIH + G + + + S MA + +REN
Sbjct: 117 RVEIAHKHGADLFMSIHADGFTNPKAA-GASVFALSNRGASSAMAKYLSEREN-----RA 170
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAV 210
D K D ++F+L+Q S+ L I K + H R + V
Sbjct: 171 DEVAGKKATDRDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPIHKLHSRTTEQAAFVV 230
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
L ++PSVLVE FI+NP E R LG+ A R ++A+AIA G Y +D +
Sbjct: 231 LKSPSIPSVLVETSFITNPEEERLLGTTAFRQKIATAIANGIISYFHWFDNQ 282
>gi|138896442|ref|YP_001126895.1| N-acetylmuramoyl-L-alanine amidase, sporulationmother cell wall
hydrolase [Geobacillus thermodenitrificans NG80-2]
gi|134267955|gb|ABO68150.1| N-acetylmuramoyl-L-alanine amidase, sporulationmother cell wall
hydrolase [Geobacillus thermodenitrificans NG80-2]
Length = 234
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 106/224 (47%), Gaps = 51/224 (22%)
Query: 33 FTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
F VID GHGG+D GA NGLREKD+ L +AL I + VKV TREKD FV+L
Sbjct: 4 FIQVIDPGHGGYDPGATANGLREKDLTLKIALYTRDYIYDLYEGVKVYLTREKDVFVSLS 63
Query: 93 GRAEYANKNNADLFISIHVNSQERGHGGYGTETYVM--GHERNSKNMAVVQRENAVILME 150
RA +AN+ NAD F SIH+N+ GG G E+Y+ + SK A+ + I+ E
Sbjct: 64 ERAAFANRLNADHFCSIHINAG----GGEGFESYIYCGSYSSKSKTQALRNVLHDTIVAE 119
Query: 151 KDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNLAV 210
++ +RG K + AV
Sbjct: 120 TKFK---------------------------------------------NRGKKEADYAV 134
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFAR 254
L + MP+VL E GFI N +A +L S+A ++A A A G A+
Sbjct: 135 LRETKMPAVLTENGFIDNKDDADFLKSDANLRKIALAHAHGLAK 178
>gi|84362788|ref|ZP_00987402.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Burkholderia dolosa
AUO158]
gi|124894191|gb|EAY68071.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia dolosa AUO158]
Length = 508
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 80/238 (33%), Positives = 120/238 (50%), Gaps = 19/238 (7%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
+G R TV ID GHGG D GA+G G EK I L +A ++ I + P+++ + TR+
Sbjct: 269 KGGTVRLLTVAIDPGHGGEDPGAIGGAGTYEKHIALDIAKKLRAKIDAA-PNMRAMMTRD 327
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQR 142
DFFV L R + A + ADLF+SIH ++ G+ + + S A + +
Sbjct: 328 ADFFVPLNVRVQKARRVGADLFVSIHADAFTTP-SARGSSVFALSDHGASSAAARWLANK 386
Query: 143 ENAVILMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQIQK--GFVAKG 197
ENA L+ G + ++ ++ + +F+L S++ + K G + K
Sbjct: 387 ENASDLI--------GGINIKTQDAAVSRALFDLSTTAQIRDSLRYGNYVLKEVGTINK- 437
Query: 198 RHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H V+ AVL +PS+LVE FISNP E R L +A RD++A AI RG RY
Sbjct: 438 LHKGSVEQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDAYRDQMADAIFRGIKRY 495
>gi|32491017|ref|NP_871271.1| hypothetical protein WGLp268 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166223|dbj|BAC24414.1| b2817 [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 405
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 75/232 (32%), Positives = 121/232 (52%), Gaps = 24/232 (10%)
Query: 34 TVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLM 92
T+++D GHGG D GA+G EK++ L +A R+ LI+ K P ++V TR KD FV+L
Sbjct: 178 TIMLDPGHGGEDPGAIGQKNTYEKNVVLQIAKRIYNLIQKK-PYMRVYMTRNKDVFVSLK 236
Query: 93 GRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKD 152
R A + D+FISIH +S ++ +V G ++ + R+ A I+ EK
Sbjct: 237 DRIIKARRKKIDIFISIHTDSAKK--------KFVKG-----ASVFSISRKEANIVAEKY 283
Query: 153 YRTVYKGFD-----PRSSESYI---MFELMQNTYQDQSIKLAQQIQKGFVA-KGRHDRGV 203
Y Y + +S++ YI +F+L+QN ++S+K +QI H + +
Sbjct: 284 YSNNYHFIENIIGIKKSNDEYIDHTIFDLIQNFSINESVKFGKQILNSLEKITDLHKKNI 343
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
AVL +PS+L+E+ FISN E + L + + ++A AI G +Y
Sbjct: 344 GQAGFAVLKAPEIPSILIEIAFISNLQEEKNLNNSIYQQKVAKAIFEGIEKY 395
>gi|149920010|ref|ZP_01908484.1| N-acetylmuramoyl-L-alanine amidase [Plesiocystis pacifica SIR-1]
gi|149819107|gb|EDM78543.1| N-acetylmuramoyl-L-alanine amidase [Plesiocystis pacifica SIR-1]
Length = 241
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 82/245 (33%), Positives = 130/245 (53%), Gaps = 24/245 (9%)
Query: 30 NRAFTVVIDAGHGGHDSGAVGN--GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDF 87
++ F +VID GHGG + G G+ G+ EK++ LA+A ++ + P ++L TRE D
Sbjct: 10 DKRFRLVIDPGHGGENEGCHGHDHGVVEKELTLAMAQQLASRVHELLPRAEILLTREADE 69
Query: 88 FVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVV-QRENAV 146
+ L R +AN ADLF+S+H N+ + G ET+++ E +++ A+ QREN
Sbjct: 70 TLHLSQRVAFANAAEADLFLSLHCNASPLSNQT-GYETFILDLEASNEETALTAQREND- 127
Query: 147 ILMEKDYRTVYKGFD---PRSSE---SYIMFELMQNTYQDQSIKLAQ--QIQKGFVAKGR 198
+GF SSE S ++ EL + ++ A+ Q Q+ + R
Sbjct: 128 -----------EGFARPANTSSEGDVSTMLRELSMTADRSRAAHFARAIQAQQRKLFPDR 176
Query: 199 HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKED 258
DRGV+ G VL+ + MP+VL E+GF+ +P E L S +G+ +L AIA+ A Y D
Sbjct: 177 PDRGVRQGPFDVLLGARMPAVLHEVGFLDHPGEGPMLRSASGQAKLVEAIAQATASYYGD 236
Query: 259 YDRRS 263
RR+
Sbjct: 237 IVRRA 241
>gi|108563182|ref|YP_627498.1| N-acetylmuramoyl-L-alanine amidase [Helicobacter pylori HPAG1]
gi|107836955|gb|ABF84824.1| N-acetylmuramoyl-L-alanine amidase [Helicobacter pylori HPAG1]
Length = 432
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 121/230 (52%), Gaps = 22/230 (9%)
Query: 35 VVIDAGHGGHDSGAV-GNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+V+DAGHGG D GA+ N + EKDI L V + + +K + VL TR+KD ++ L+G
Sbjct: 211 IVLDAGHGGKDCGAMSANLVCEKDIVLEVVKFLHKELKKR--GYSVLLTRDKDIYIDLVG 268
Query: 94 RAEYANKNNADLFISIHVNS--QERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEK 151
R E AN+ +ADLFIS+H NS + +G ETY + R+ + V ++EN +
Sbjct: 269 RTELANRKSADLFISVHANSIPKHSTSNAHGIETYFLSTARSERARKVAEQENKDDVNLM 328
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH------DRGVKL 205
DY + + +++ I+ S KLA +Q G + R D GV+
Sbjct: 329 DYFSKSLFLNSLNTQRLIV-----------SNKLAIDVQYGMLQSVRKNYPDVVDGGVRE 377
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
G VL + MPS+L+E+G+ S+ E++ + S+ + LA IA G +
Sbjct: 378 GPFWVLAGALMPSILIEIGYNSHAIESKRIQSKPYQKILAKGIADGIDSF 427
>gi|109947219|ref|YP_664447.1| hypothetical protein Hac_0641 [Helicobacter acinonychis str.
Sheeba]
gi|109714440|emb|CAJ99448.1| amiA [Helicobacter acinonychis str. Sheeba]
Length = 444
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 119/230 (51%), Gaps = 22/230 (9%)
Query: 35 VVIDAGHGGHDSGAV-GNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+V+DAGHGG D GA+ N + EKDI L V + + +K + VL TR KD ++ L+
Sbjct: 223 IVLDAGHGGKDCGAMSANFVCEKDIVLEVVKFLNKELKKR--GYSVLLTRNKDIYIDLVA 280
Query: 94 RAEYANKNNADLFISIHVNS--QERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEK 151
R E ANK +ADLFIS+H NS + + +G ETY + R+ + V ++EN +
Sbjct: 281 RTELANKKSADLFISVHANSIPKHSTYNAHGIETYFLSTARSERARKVAEQENKHDVNLM 340
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH------DRGVKL 205
DY + + +++ I S KLA +Q G + R D GV+
Sbjct: 341 DYFSKSLFLNSLNTKRLI-----------ASNKLAIDVQYGMLQNIRKNYPDVVDGGVRE 389
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
G VL + MPS+L+E+G+ S+ E++ + S+ + LA IA G +
Sbjct: 390 GPFWVLAGALMPSILIEIGYNSHAIESKRIQSKPYQKILAKGIADGIDSF 439
>gi|85059939|ref|YP_455641.1| N-acetylmuramoyl-L-alanine amidase [Sodalis glossinidius str.
'morsitans']
gi|84780459|dbj|BAE75236.1| N-acetylmuramoyl-L-alanine amidase [Sodalis glossinidius str.
'morsitans']
Length = 419
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 82/242 (33%), Positives = 123/242 (50%), Gaps = 22/242 (9%)
Query: 24 PLEGQ--RNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVL 80
PL G+ R+R V++D GHGG D GA+G REKDI L +A R+ LIK + P+++V
Sbjct: 180 PLAGKAGRDRPVVVMLDPGHGGEDPGAIGKFKTREKDIVLQIARRLRALIK-REPNMQVY 238
Query: 81 YTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA-- 138
TR +D F+ L R A K ADLF+SIH ++ R +G + + + + A
Sbjct: 239 MTRNEDVFIPLKVRVAKARKQRADLFVSIHADAFTR-RSAHGASVFALSTKGATSAAARY 297
Query: 139 VVQRENAVILMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQIQKGFVA 195
+ Q +NA + G +S + Y+ +F+LMQ + S+K + + V+
Sbjct: 298 LAQTQNAADEI---------GGVSKSGDRYLDHTIFDLMQTATINDSLKFGKHVLS-HVS 347
Query: 196 K--GRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFA 253
K H + V AVL +PS+LVE FISN E R L + + ++A AI G
Sbjct: 348 KITQLHKKSVDQAGFAVLKAPDIPSILVETAFISNVQEERRLRTARYQQQMAEAILAGIK 407
Query: 254 RY 255
Y
Sbjct: 408 AY 409
>gi|152971309|ref|YP_001336418.1| N-acetylmuramoyl-l-alanine amidase I [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150956158|gb|ABR78188.1| N-acetylmuramoyl-l-alanine amidase I [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 290
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 117/232 (50%), Gaps = 12/232 (5%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V++D GHGG D+GA+G NG +EK + LA+A V +++S D ++ TR D F+ L
Sbjct: 60 VMLDPGHGGIDTGAIGHNGSKEKHVVLAIAKNVRSILRSNGIDARL--TRTGDTFIPLYD 117
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R E A+++ ADLF+SIH + G + + + S MA + REN
Sbjct: 118 RVEIAHQHGADLFMSIHADGFTNPSAA-GASVFALSNRGASSAMAKYLSDREN-----RA 171
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLGNLAV 210
D K D ++F+L+Q S+ L I K + H R + V
Sbjct: 172 DEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVV 231
Query: 211 LVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR 262
L ++PSVLVE FI+NP E + LG+ A R ++A+AIA G Y +D +
Sbjct: 232 LKSPSIPSVLVETSFITNPNEEKLLGTTAFRQKIATAIANGIISYFHWFDNQ 283
>gi|156932400|ref|YP_001436316.1| hypothetical protein ESA_00179 [Enterobacter sakazakii ATCC
BAA-894]
gi|156530654|gb|ABU75480.1| hypothetical protein ESA_00179 [Enterobacter sakazakii ATCC
BAA-894]
Length = 448
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 11/227 (4%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D GA+G G+REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 193 VAIDAGHGGQDPGAIGPGGVREKNVTIAIARKL-RTLLNDDPMFKGVLTRDGDYFISVMG 251
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A + NA+L +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 252 RSDVARQQNANLLVSIHADAAP-NRDATGASVWVLSNRRANSEMASWLEQHEKQSELLGG 310
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + + Q+Q+ H R + +L
Sbjct: 311 AGDVLANSQADPYLSQAVLDLQFGHSQRVGYDVATSVLGQLQR---VGALHKRRPEHASL 367
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VL +PS+LVE GFISN E R L S+ + ++A AI +G Y
Sbjct: 368 GVLRSPDIPSLLVETGFISNTGEERLLASDDYQQQIAEAIYQGLRNY 414
>gi|56416149|ref|YP_153224.1| N-acetylmuramoyl-L-alanine amidase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|56130406|gb|AAV79912.1| N-acetylmuramoyl-L-alanine amidase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
Length = 440
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 77/249 (30%), Positives = 125/249 (50%), Gaps = 11/249 (4%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 189 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNNDPMFKGVLTRDGDYFISVMG 247
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 248 RSDVARKQNANFLVSIHADAAP-NRDATGASVWVLSNRRANSEMANWLEQHEKQSELLGG 306
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + + Q+ H R + +L
Sbjct: 307 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATNVLSQLDG---VGALHKRRPEHASL 363
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVSE 268
VL +PS+LVE GFISN E R L S+ + ++A AI RG +Y + +S
Sbjct: 364 GVLRSPDIPSILVETGFISNHGEERLLASDRYQQQIADAIYRGLRKYFAAHPIQSAPQGG 423
Query: 269 PAPQATEEE 277
P A+ +
Sbjct: 424 PGQTASTNQ 432
>gi|153004973|ref|YP_001379298.1| N-acetylmuramoyl-L-alanine amidase [Anaeromyxobacter sp. Fw109-5]
gi|152028546|gb|ABS26314.1| N-acetylmuramoyl-L-alanine amidase [Anaeromyxobacter sp. Fw109-5]
Length = 601
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 120/238 (50%), Gaps = 20/238 (8%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R VV+DAGHGGHD GA+G +REKD+ LA+A R+ + ++++ +V+ TR+ D ++
Sbjct: 372 RIRRVVVDAGHGGHDPGAIGPRRVREKDVTLAMAKRLAKRLRAE--GFEVVLTRKNDRYL 429
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILM 149
L R AN DLF+SIH N+ R + G ETY + + + REN V L
Sbjct: 430 ALEERTAIANTAGGDLFVSIHANAHPRRNRS-GVETYFLNVADDRYAARLAARENGVELA 488
Query: 150 EKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR------HDRGV 203
++ V + I+ +L S +LA +Q+ R D GV
Sbjct: 489 DRGDGDVGR----------ILTDLDAKASAGASRRLAGLVQRELTTGVRSRVGEVRDLGV 538
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDR 261
K VL+ + MP+VLVE FISN E R L S + ++E+A+ IAR + R
Sbjct: 539 KSALFYVLLGARMPAVLVETAFISNRVEERRLASASYQEEVAAGIARAVTSFARSEAR 596
>gi|16767604|ref|NP_463219.1| N-acetylmuramoyl-l-alanine amidase II [Salmonella typhimurium LT2]
gi|20141219|sp|P26366|AMIB_SALTY N-acetylmuramoyl-L-alanine amidase amiB precursor
gi|16422918|gb|AAL23178.1| N-acetylmuramoyl-l-alanine amidase II [Salmonella typhimurium LT2]
Length = 439
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 77/249 (30%), Positives = 125/249 (50%), Gaps = 11/249 (4%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 188 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNNDPMFKGVLTRDGDYFISVMG 246
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 247 RSDVARKQNANFLVSIHADAAP-NRDATGASVWVLSNRRANSEMANWLEQHEKQSELLGG 305
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + + Q+ H R + +L
Sbjct: 306 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATNVLSQLDG---VGSLHKRRPEHASL 362
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVSE 268
VL +PS+LVE GFISN E R L S+ + ++A AI RG +Y + +S
Sbjct: 363 GVLRSPDIPSILVETGFISNHGEERLLASDRYQQQIADAIYRGLRKYFAAHPIQSAPQGG 422
Query: 269 PAPQATEEE 277
P A+ +
Sbjct: 423 PGQTASTNQ 431
>gi|62182804|ref|YP_219221.1| N-acetylmuramoyl-l-alanine amidase II, a murein hydrolase
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|62130437|gb|AAX68140.1| N-acetylmuramoyl-l-alanine amidase II, a murein hydrolase
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
Length = 440
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 77/249 (30%), Positives = 125/249 (50%), Gaps = 11/249 (4%)
Query: 35 VVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+ IDAGHGG D GA+G G REK++ +A+A ++ R + + P K + TR+ D+F+++MG
Sbjct: 189 IAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RTLLNNDPMFKGVLTRDGDYFISVMG 247
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R++ A K NA+ +SIH ++ G +V+ + R + MA + Q E L+
Sbjct: 248 RSDVARKQNANFLVSIHADAAP-NRDATGASVWVLSNRRANSEMANWLEQHEKQSELLGG 306
Query: 152 DYRTVYKG-FDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNL 208
+ DP S++ + F Q D + + Q+ H R + +L
Sbjct: 307 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATNVLSQLDG---VGSLHKRRPEHASL 363
Query: 209 AVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRSGKVSE 268
VL +PS+LVE GFISN E R L S+ + ++A AI RG +Y + +S
Sbjct: 364 GVLRSPDIPSILVETGFISNHGEERLLASDRYQQQIADAIYRGLRKYFAAHPIQSAPQGG 423
Query: 269 PAPQATEEE 277
P A+ +
Sbjct: 424 PGQTASTNQ 432
>gi|66048301|ref|YP_238142.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas syringae pv.
syringae B728a]
gi|63259008|gb|AAY40104.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas syringae pv.
syringae B728a]
Length = 408
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 119/230 (51%), Gaps = 10/230 (4%)
Query: 31 RAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVA-LRVGRLIKSKHPDVKVLYTREKDFF 88
R VV+DAGHGG D GAVG+ G REKD+ L++A L RL + K DV+++ R DFF
Sbjct: 161 RDIMVVVDAGHGGKDPGAVGSRGEREKDVVLSIAQLLARRLKREKGFDVRLV--RNDDFF 218
Query: 89 VTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVM--GHERNSKNMAVVQRENAV 146
V L R E+A+K+NAD+FIS+H ++ R G + + G ++ + QREN
Sbjct: 219 VPLRKRVEFAHKSNADMFISVHADAAPRLTAS-GASVFALSEGGATSATARFMAQRENGA 277
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA-KGRHDRGVKL 205
L+ K DP + ++ ++ N S++L + H + V+
Sbjct: 278 DLLGATSLLNLKDKDPMLAG--VILDMSMNATIAASLQLGHTVLGSLEGITTLHQKRVEQ 335
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
AVL +PS+LVE GFISN +++ L + + +A + G RY
Sbjct: 336 AGFAVLKSPDVPSILVETGFISNSRDSQRLVTARHQQAVADGLFDGLQRY 385
>gi|124002823|ref|ZP_01687675.1| putative N-acetylmuramoyl-L-alanine amidase AmiA [Microscilla
marina ATCC 23134]
gi|123992051|gb|EAY31438.1| putative N-acetylmuramoyl-L-alanine amidase AmiA [Microscilla
marina ATCC 23134]
Length = 311
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 71/232 (30%), Positives = 114/232 (49%), Gaps = 45/232 (19%)
Query: 29 RNRAFTVVIDAGHGGHDSGAVGNGL---REKDINLAVALRVGRLIKSKHPDVKVLYTREK 85
+N+ F +VID GHGG D+G + EK +NL +AL++G+ +K P +KV YTR
Sbjct: 35 QNKGFVLVIDPGHGGKDTGRLRGSKSMKHEKSLNLTIALKLGKYVKKYLPHIKVYYTRTT 94
Query: 86 DFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENA 145
D +++L R ++A+ +AD FIS+H NS E +GTE ++
Sbjct: 95 DRYLSLEERVDFAHGKDADAFISVHCNSVEHKQ-VHGTELHIHS---------------- 137
Query: 146 VILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKL 205
F+L + Y + I + + G +G +D +
Sbjct: 138 -------------------------FDLPASKYLAKLINKQFKQRAGRKVRGIYDADKRQ 172
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKE 257
N V+ ++ MPSVLVE G+++N +E +YL S+ G+ +ASAI R F Y +
Sbjct: 173 KNFYVVQYTRMPSVLVECGYMTNTSEEKYLNSDRGQSIIASAIFRAFRVYTQ 224
>gi|124267216|ref|YP_001021220.1| N-acetylmuramoyl-L-alanine amidase [Methylibium petroleiphilum PM1]
gi|124259991|gb|ABM94985.1| N-acetylmuramoyl-L-alanine amidase [Methylibium petroleiphilum PM1]
Length = 454
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 80/233 (34%), Positives = 121/233 (51%), Gaps = 19/233 (8%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R V +D GHGG D GA+G GLREKD+ L VA R+ R ++ P+++ + TR+ DFFV
Sbjct: 220 RLVIVALDPGHGGEDPGAIGPTGLREKDVVLQVAQRL-RARINEQPNMRAMMTRDADFFV 278
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA---VVQRENAV 146
L R A + ADLFISIH ++ + H G + + ER + ++ + Q+ENA
Sbjct: 279 PLNERVRKARRVQADLFISIHADAFIKPHA-RGASVFALS-ERGATSVEARWMAQKENAA 336
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQ---SIKLAQQIQKGFVAKGR-HDRG 202
L+ G + +S ++ + L+ + Q S++L ++ GR H
Sbjct: 337 DLV--------GGTNIKSKDAAVTRALLDMSTSVQIRDSLRLGSEVLGRIGQVGRLHKPR 388
Query: 203 VKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
V+ AVL +PS+LVE FISNP E + L A + +L A+ G RY
Sbjct: 389 VEQAGFAVLKAPDVPSILVETAFISNPEEEKRLRDPAYQTQLVEALLSGILRY 441
>gi|82703647|ref|YP_413213.1| N-acetylmuramoyl-L-alanine amidase [Nitrosospira multiformis ATCC
25196]
gi|82411712|gb|ABB75821.1| N-acetylmuramoyl-L-alanine amidase [Nitrosospira multiformis ATCC
25196]
Length = 456
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 120/233 (51%), Gaps = 13/233 (5%)
Query: 31 RAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R TV ID GHGG D GA+ G REK+I LA+A ++ I + P+++ TR+ D+++
Sbjct: 219 RLITVAIDPGHGGEDPGAISRRGTREKNITLAIARKLKEKI-DREPNMRAALTRDGDYYI 277
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA---VVQRENAV 146
+L R A + NADLF+S+H ++ + H G+ + + ER + + A + ++EN
Sbjct: 278 SLSQRLVKARQLNADLFVSVHADAFNKPHA-RGSSVFALS-ERGATSAAAGWLARKENEA 335
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI-QKGFVAKGRHDRGVKL 205
L+ + F R+ + +L Q + S+KL + + K H V+
Sbjct: 336 DLVGGVNLDIPDPFLKRT-----LLDLSQTATINDSLKLGKAVLSKIGNINHLHKAEVEQ 390
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKED 258
AVL +PS+LVE FISNP E R L +D+LASAI G Y D
Sbjct: 391 AGFAVLKSPDIPSILVETAFISNPDEERKLRDHGYQDKLASAILAGIKHYFAD 443
>gi|84355584|ref|ZP_00980464.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Burkholderia
cenocepacia PC184]
gi|124872170|gb|EAY63886.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia cenocepacia PC184]
Length = 320
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 82/243 (33%), Positives = 116/243 (47%), Gaps = 29/243 (11%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
+G R TV ID GHGG D GA+G NG EK I L +A ++ I + P+++ + TR+
Sbjct: 81 KGGTVRLLTVAIDPGHGGEDPGAIGGNGTYEKHIALDIAKKLRAKIDAA-PNMRAMMTRD 139
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNS----QERG--------HGGYGTETYVMGHER 132
DFFV L R + A + ADLF+SIH ++ RG HG M ++
Sbjct: 140 ADFFVPLNVRVQKARRVGADLFVSIHADAFTTPSARGSSVFALSDHGATSAAARWMANKE 199
Query: 133 NSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKG 192
NS ++ + + D FD S+ + I L Y + + ++ KG
Sbjct: 200 NSSDLI-----GGINIKTADAAVNRALFD-MSTTAQIRDSLRYGNYVLKEVGGINKLHKG 253
Query: 193 FVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGF 252
V+ AVL +PS+LVE FISNP E R L ++ RDE+A AI RG
Sbjct: 254 ---------SVEQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDSYRDEMADAIFRGI 304
Query: 253 ARY 255
RY
Sbjct: 305 KRY 307
>gi|94309471|ref|YP_582681.1| cell wall hydrolase/autolysin [Ralstonia metallidurans CH34]
gi|93353323|gb|ABF07412.1| cell wall hydrolase/autolysin [Ralstonia metallidurans CH34]
Length = 497
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 33/247 (13%)
Query: 24 PLEGQRNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYT 82
P E + R TV ID GHGG D GA+G G REKD+ L +A R+ I ++ P+++ + T
Sbjct: 256 PSEFKMRRLLTVAIDPGHGGEDPGAIGAAGSREKDVVLQIATRLRAKIDAQ-PNMRAMMT 314
Query: 83 REKDFFVTLMGRAEYANKNNADLFISIHVNS----QERGHGGYGTETYVMGHERNSKNMA 138
R+ DFFV L R + A + ADLF+SIH ++ + RG + ER + + A
Sbjct: 315 RDSDFFVPLNVRVQKARRVQADLFVSIHADAFLSPEARGASVFALS------ERGASSSA 368
Query: 139 ---VVQRENAVILM------EKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI 189
+ +EN L+ KD + + ++ +L + S+++ + +
Sbjct: 369 ARWLANKENNADLIGGANMGNKDAQV-----------ARVLLDLSTTAQINDSMQVGRSV 417
Query: 190 QKGFVAKGR-HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAI 248
+ + H V+ AVL +PS+L+E FISNP E R L ++ +++LA+AI
Sbjct: 418 LQEIGGINKLHKGSVEQAGFAVLKAPDIPSILIETAFISNPEEERKLNDDSHQEQLANAI 477
Query: 249 ARGFARY 255
RG Y
Sbjct: 478 LRGIKAY 484
>gi|154687677|ref|YP_001422838.1| LytC [Bacillus amyloliquefaciens FZB42]
gi|154353528|gb|ABS75607.1| LytC [Bacillus amyloliquefaciens FZB42]
Length = 496
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 74/223 (33%), Positives = 103/223 (46%), Gaps = 50/223 (22%)
Query: 34 TVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
TV ID GHG DSGA GNGL EK++NL +A R+ + + +R+ D F +L
Sbjct: 321 TVFIDPGHGYQDSGATGNGLLEKNVNLDIATRLNNQLYGA--GALTVMSRKGDTFDSLEE 378
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDY 153
R K NAD+FIS+H N+ + GTETY +K Y
Sbjct: 379 RVNKGAKANADIFISVHANANDNSSAN-GTETY----------------------YDKTY 415
Query: 154 RTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFV-AKGRHDRGVKLGNLAVLV 212
++ S++LAQ IQ V A G DR VK V+
Sbjct: 416 QSA------------------------NSLRLAQNIQPRMVSALGTRDRSVKTAGFYVIK 451
Query: 213 FSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+S MPSVL+E GF+++P +A L +D LA+ I +G + Y
Sbjct: 452 YSKMPSVLLETGFVTSPIDANILKQSTKKDRLAAGITQGVSSY 494
>gi|71908662|ref|YP_286249.1| Cell wall hydrolase/autolysin [Dechloromonas aromatica RCB]
gi|71848283|gb|AAZ47779.1| Cell wall hydrolase/autolysin [Dechloromonas aromatica RCB]
Length = 449
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 122/233 (52%), Gaps = 17/233 (7%)
Query: 30 NRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFF 88
+R T+++D GHGG D GA+G G EK++ L VA R+ I ++ P+++ + TR+ DFF
Sbjct: 210 DRLVTIMLDPGHGGEDPGAIGKAGTYEKNVTLEVARRLKARIDAE-PNMRAVLTRDSDFF 268
Query: 89 VTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAV 146
V L R + A + +DLF+SIH ++ + G+ +V+ + S A + Q+EN
Sbjct: 269 VPLQMRVQKARRIQSDLFLSIHADAWIKPDAK-GSSVFVLSEKGASSTQARLLAQKENQA 327
Query: 147 ILMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQIQKGFVA-KGRHDRG 202
L+ G + S + ++ + +L Q + S+KL + + A H
Sbjct: 328 DLI--------GGVNIGSKDLFLARTLLDLSQTGTINDSLKLGKYLLGELGAINTLHKAN 379
Query: 203 VKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
V+ AVL +PS L+E FISNP E L +A +++LA AI RG +Y
Sbjct: 380 VEQAGFAVLKAPDIPSALIETAFISNPEEESRLNDDAYQEKLAGAIVRGIRQY 432
>gi|42527220|ref|NP_972318.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Treponema denticola
ATCC 35405]
gi|41817644|gb|AAS12229.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Treponema denticola
ATCC 35405]
Length = 337
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 81/254 (31%), Positives = 123/254 (48%), Gaps = 37/254 (14%)
Query: 23 LPLEGQRNRAFTVVIDAGHGGHDSGAVGNG--------LREKDINLAVALRVGRLIKSKH 74
+P + + R ++ID GHGG D G VG+ L EKDI L V+L + +++K +
Sbjct: 103 VPQKEENYRVGVILIDPGHGGKDPGCVGSYVENKKTFVLYEKDIALKVSLDLYKMLKKAY 162
Query: 75 PDVKVLYTREKDFFVTLMGRAEYAN-----KNNADLFISIHVNSQERGHGGYGTETYVMG 129
PD K+L TR KD + TL R AN KN + L++SIHVN+ G E + +
Sbjct: 163 PDKKILLTRNKDVYPTLEDRVNMANSVKLKKNESILYVSIHVNASLSSKAA-GFEVWYLP 221
Query: 130 HERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI 189
E R V D +TV P+ S I+ +M+ + +SI +AQ I
Sbjct: 222 PE---------YRREVV-----DKKTV-----PKEIHS-ILNSMMEEEFTMESILMAQNI 261
Query: 190 QKGF---VAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELAS 246
G + K +RG++ V+ MPSVL+ELGFISN E + L S + +
Sbjct: 262 LDGLDAQIGKKSPNRGIRENQWFVVRNVKMPSVLIELGFISNKTEIKLLNSPDYLKKCSL 321
Query: 247 AIARGFARYKEDYD 260
I G + + +++
Sbjct: 322 GIYNGLSAFISNFE 335
>gi|91789059|ref|YP_550011.1| N-acetylmuramoyl-L-alanine amidase [Polaromonas sp. JS666]
gi|91698284|gb|ABE45113.1| N-acetylmuramoyl-L-alanine amidase [Polaromonas sp. JS666]
Length = 471
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 83/237 (35%), Positives = 123/237 (51%), Gaps = 17/237 (7%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
EG+ +R V +D GHGG D GAVG G REKD+ L +A R+ I ++ P+++ TR+
Sbjct: 232 EGKTDRLVIVALDPGHGGEDPGAVGPGGTREKDVVLQIAHRLRDRI-NQQPNMRAYLTRD 290
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQR 142
DFFV L R + A + ADLFISIH ++ G + + + S + A + ++
Sbjct: 291 ADFFVPLHIRVQKARRVQADLFISIHADAFFTARP-QGASVFALSDKGASSSAARWLAEK 349
Query: 143 ENAVILMEKDYRTVYKGFDPRSSESYIMFEL--MQNTYQ-DQSIKLAQQIQKGFVAKGR- 198
EN+ L+ G + ++ + + L M T Q + S+KL + GR
Sbjct: 350 ENSADLV--------GGVNVKARDVQVQKALLDMSTTAQINDSLKLGSAMLGEIGHVGRL 401
Query: 199 HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H V+ AVL +PSVLVE FISNP E L S+ + +LA A+ RG +RY
Sbjct: 402 HKPRVEQAGFAVLKAPDIPSVLVETAFISNPEEEARLRSDDYQIQLADALMRGISRY 458
>gi|89208508|ref|ZP_01187011.1| Cell wall hydrolase/autolysin [Bacillus weihenstephanensis KBAB4]
gi|89153567|gb|EAR73633.1| Cell wall hydrolase/autolysin [Bacillus weihenstephanensis KBAB4]
Length = 333
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 102/219 (46%), Gaps = 46/219 (21%)
Query: 35 VVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGR 94
+VIDAGHGG+DSGAVGNGL EK++ L +A RV ++ + +P + + TR+ D F++L R
Sbjct: 3 LVIDAGHGGYDSGAVGNGLVEKELTLQIARRVRDILSANYP-INIKMTRDSDVFISLSER 61
Query: 95 AEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDYR 154
A AN AD FIS H+NS GG G E+Y+ NS
Sbjct: 62 ANIANSFGADYFISFHINSG----GGTGFESYIYNALSNS-------------------- 97
Query: 155 TVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVKLGNLAVLVFS 214
+ Y+ Q K+ + G DRG K N AVL +
Sbjct: 98 --------------------SSAYEKQQ-KMHAAVNPVLTKYGLRDRGAKKANYAVLRET 136
Query: 215 AMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFA 253
AM ++L E FI +A L + ++L+ A A G A
Sbjct: 137 AMDAILTETAFIDTTFDANLLKNPQFIEDLSQAYANGIA 175
>gi|70733459|ref|YP_263234.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas fluorescens Pf-5]
gi|68347758|gb|AAY95364.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas fluorescens Pf-5]
Length = 407
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 116/232 (50%), Gaps = 10/232 (4%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVA-LRVGRLIKSKHPDVKVLYTREKDFF 88
R VV+D GHGG D GAVG G REKD+ LA+A L RL + K DVK++ R DFF
Sbjct: 160 RDIIVVVDPGHGGKDPGAVGARGEREKDVVLAIARLLAKRLKREKGFDVKLV--RNDDFF 217
Query: 89 VTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVM--GHERNSKNMAVVQRENAV 146
V L R E A K+ AD+FIS+H ++ R G Y + G ++ + QREN
Sbjct: 218 VPLRKRVEIARKHQADMFISVHADAAPRLTAS-GASVYALSEGGATSATARLMAQRENGA 276
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA-KGRHDRGVKL 205
L+ K DP + ++ ++ N S++L + + H + V+
Sbjct: 277 DLLGATTLLNLKDKDPMLAG--VIVDMSMNATIAASLQLGGTVLQSLSGITTLHQKRVEQ 334
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKE 257
AVL +PS+LVE GFISN +++ L + + +A + G RY E
Sbjct: 335 AGFAVLKSPDVPSILVETGFISNSRDSQRLVTARHQQAIADGLFNGLQRYFE 386
>gi|126656939|ref|ZP_01728117.1| N-acetylmuramoyl-L-alanine amidase [Cyanothece sp. CCY0110]
gi|126621777|gb|EAZ92486.1| N-acetylmuramoyl-L-alanine amidase [Cyanothece sp. CCY0110]
Length = 615
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 84/245 (34%), Positives = 116/245 (47%), Gaps = 59/245 (24%)
Query: 23 LPLEGQRNRA-FTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVL 80
LP Q R VVID GHGG D GAVG GLRE D+ L ++L V +L+K + V+V+
Sbjct: 426 LPPGNQTPRGRVLVVIDPGHGGKDPGAVGLGGLREVDVILPISLEVSQLLKQQ--GVEVM 483
Query: 81 YTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGY-GTETYVMGHERNSKNMAV 139
TR D+FV+L GR AN+ AD+F+SIH N+ G G ET+ G+
Sbjct: 484 LTRNADYFVSLQGRTSMANRARADIFVSIHANAVGGGRSNVNGMETFYTGN--------- 534
Query: 140 VQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH 199
RE L E +R++ + ++ +A +
Sbjct: 535 --RE----LAEAIHRSILR-----------------------NVTIA------------N 553
Query: 200 DRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDY 259
DRGVK VL S MP+ LVE GF++ + L A R ++A AIA+G DY
Sbjct: 554 DRGVKSSRFYVLRTSRMPAALVETGFVTGTIDNARLRDPAYRSQMARAIAQGIL----DY 609
Query: 260 DRRSG 264
R+ G
Sbjct: 610 IRQKG 614
>gi|83719750|ref|YP_441278.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia thailandensis
E264]
gi|83653575|gb|ABC37638.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia thailandensis
E264]
Length = 514
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 114/238 (47%), Gaps = 29/238 (12%)
Query: 31 RAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R TV ID GHGG D GA+G G EK I L +A ++ I + P+++ + TR+ DFFV
Sbjct: 280 RLLTVAIDPGHGGEDPGAIGGAGTYEKHIALDIAKKLRAKIDAA-PNMRAMMTRDADFFV 338
Query: 90 TLMGRAEYANKNNADLFISIHVNS----QERG--------HGGYGTETYVMGHERNSKNM 137
L R + A + ADLF+SIH ++ RG HG + ++ NS ++
Sbjct: 339 PLNVRVQKARRVGADLFVSIHADAFTTPSARGSSVFALSDHGASSAAARWLANKENSSDL 398
Query: 138 AVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKG 197
+ + +D FD S+ + I L Y + + ++ KG
Sbjct: 399 I-----GGINIKTQDVSVNRALFD-MSTTAQIRDSLRYGNYVLREVGGINKLHKG----- 447
Query: 198 RHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
V+ AVL +PS+LVE FISNP E R L +A RD++A AI RG RY
Sbjct: 448 ----SVEQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDAYRDQMADAIFRGIKRY 501
>gi|56965210|ref|YP_176942.1| hypothetical protein ABC3448 [Bacillus clausii KSM-K16]
gi|56911454|dbj|BAD65981.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 252
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 88/261 (33%), Positives = 116/261 (44%), Gaps = 60/261 (22%)
Query: 1 MSRKNHTHYLLLWMTALLLIVC----LPLEGQRNRAFTVV-IDAGHGGHDSGAVGNGLRE 55
+ RK H L M A+L +V L E + + V+ IDAGHGG D GAV NG+ E
Sbjct: 45 LMRKKHAFSFL--MAAILAVVSTSYFLASEAAASVSGKVIAIDAGHGGSDPGAVANGISE 102
Query: 56 KDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQE 115
KD+ L VA + + V+ TR D +V L RAE AN NAD F+SIH N+
Sbjct: 103 KDLVLKVAAHTKD--RLEEAGATVIMTRTGDVYVGLEARAELANARNADTFVSIHANAAT 160
Query: 116 RGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQ 175
+GTET+ P SS
Sbjct: 161 P--SAHGTETFHF---------------------------------PSSS---------- 175
Query: 176 NTYQDQSIKLAQQIQKGFVAK-GRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARY 234
Q LA +Q V +RGVK N +VL +AMP+ LVELGFI+N EA
Sbjct: 176 -----QGQALASALQTELVNTLNTRNRGVKSANFSVLRNTAMPAALVELGFITNAEEAER 230
Query: 235 LGSEAGRDELASAIARGFARY 255
+ + + +E A+AI RG +Y
Sbjct: 231 MKAASFPNEAATAIVRGLQQY 251
>gi|74317537|ref|YP_315277.1| N-acetylmuramoyl-L-alanine amidase [Thiobacillus denitrificans ATCC
25259]
gi|74057032|gb|AAZ97472.1| N-acetylmuramoyl-L-alanine amidase [Thiobacillus denitrificans ATCC
25259]
Length = 418
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 119/234 (50%), Gaps = 13/234 (5%)
Query: 27 GQRNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREK 85
GQ R TV IDAGHGG D GA+G G REKDI LA+A ++ + I ++ ++ + TR+
Sbjct: 177 GQYVRLITVAIDAGHGGEDPGALGAAGSREKDITLALAKKLKQKIDAQE-NMHAVLTRDG 235
Query: 86 DFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA---VVQR 142
D+FV L R A ADLF+SIH ++ + H G+ + + E + ++A + ++
Sbjct: 236 DYFVPLGQRVTKARSFKADLFLSIHADAFIKPHA-RGSSVFALS-ENGATSVAARWLARK 293
Query: 143 ENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDR 201
EN L+ V F R+ + +L Q + S+KL + K H
Sbjct: 294 ENEADLIGGINIDVKDPFLKRT-----LLDLSQTATINDSLKLGHAVLKEIGGVNTLHKA 348
Query: 202 GVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
V+ AVL +PS+L+E FISNP E + L A +D+L AI G Y
Sbjct: 349 QVEQAGFAVLKAPDIPSILIETAFISNPEEEKRLNDAAYQDKLVDAIVVGVKDY 402
>gi|118707432|ref|ZP_01560018.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia cenocepacia MC0-3]
gi|118655095|gb|EAV61874.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia cenocepacia MC0-3]
Length = 508
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 81/243 (33%), Positives = 115/243 (47%), Gaps = 29/243 (11%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVGNG-LREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
+G R TV ID GHGG D GA+G G EK I L +A ++ I + P+++ + TR+
Sbjct: 269 KGGTVRLLTVAIDPGHGGEDPGAIGGGGTYEKHIALDIAKKLRAKIDAA-PNMRAMMTRD 327
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNS----QERG--------HGGYGTETYVMGHER 132
DFFV L R + A + ADLF+SIH ++ RG HG M ++
Sbjct: 328 ADFFVPLNVRVQKARRVGADLFVSIHADAFTTPSARGSSVFALSDHGATSAAARWMANKE 387
Query: 133 NSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKG 192
NS ++ + + D FD S+ + I L Y + + ++ KG
Sbjct: 388 NSSDLI-----GGINIKTADAAVNRALFD-MSTTAQIRDSLRYGNYVLKEVGGINKLHKG 441
Query: 193 FVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGF 252
V+ AVL +PS+LVE FISNP E R L ++ RDE+A AI RG
Sbjct: 442 ---------SVEQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDSYRDEMADAIFRGI 492
Query: 253 ARY 255
RY
Sbjct: 493 KRY 495
>gi|117925419|ref|YP_866036.1| N-acetylmuramoyl-L-alanine amidase [Magnetococcus sp. MC-1]
gi|117609175|gb|ABK44630.1| N-acetylmuramoyl-L-alanine amidase [Magnetococcus sp. MC-1]
Length = 416
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 127/242 (52%), Gaps = 19/242 (7%)
Query: 29 RNRA-----FTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYT 82
RNR VVID GHGG D GA G +G+REKD+ L VA ++ ++ + P + T
Sbjct: 175 RNRTPVRENMVVVIDPGHGGEDPGATGPSGVREKDVVLTVAKKLAAMVNAT-PGYEAKLT 233
Query: 83 REKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHE-RNSKNMAV-- 139
RE D++V+L R A + + DLF+S+H +S R GT Y + + + + + A+
Sbjct: 234 REGDYYVSLKKRVGIARQYDPDLFMSLHADSF-RIRSARGTSVYCLSEQGKPTPDRAIKD 292
Query: 140 -VQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR 198
V+REN+ L+ + K DP + I+ +L Q ++S+ L + + A +
Sbjct: 293 LVERENSTDLVGG--VNLGKVVDPEVAG--ILMDLSQRDSLNRSLVLGRNLLDSLDAMPQ 348
Query: 199 ---HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H R VK AVL +PSVLVEL F+SNP E + E+ + LA+ + +G R+
Sbjct: 349 VRLHYRNVKQAGFAVLKAPDIPSVLVELAFLSNPNEEMMMKKESYQATLAAGLLKGVERF 408
Query: 256 KE 257
+
Sbjct: 409 AK 410
>gi|53718498|ref|YP_107484.1| putative N-acetylmuramoyl-L-alanine amidase [Burkholderia
pseudomallei K96243]
gi|53725153|ref|YP_102182.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia mallei ATCC 23344]
gi|67642855|ref|ZP_00441606.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Burkholderia mallei
GB8 horse 4]
gi|76810749|ref|YP_332476.1| N-acetylmuramoyl-L-alanine amidase, AMIC precursor protein
[Burkholderia pseudomallei 1710b]
gi|82535041|ref|ZP_00894064.1| hypothetical protein Bpse110_02003678 [Burkholderia pseudomallei
1106b]
gi|83620622|ref|ZP_00931039.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Burkholderia mallei
FMH]
gi|83623862|ref|ZP_00934122.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Burkholderia mallei
JHU]
gi|90290591|ref|ZP_01210242.1| hypothetical protein Bpse17_02004700 [Burkholderia pseudomallei
1710a]
gi|99907856|ref|ZP_01315675.1| hypothetical protein Bpse1_03004975 [Burkholderia pseudomallei
1655]
gi|100061316|ref|ZP_01323139.1| hypothetical protein BpseP_03003082 [Burkholderia pseudomallei
Pasteur]
gi|100124285|ref|ZP_01329823.1| hypothetical protein BpseS_03002153 [Burkholderia pseudomallei S13]
gi|100234014|ref|ZP_01334973.1| hypothetical protein Bpse4_03002503 [Burkholderia pseudomallei
406e]
gi|100267513|ref|ZP_01341746.1| hypothetical protein Bmal2_03000570 [Burkholderia mallei
2002721280]
gi|100916293|ref|ZP_01344777.1| hypothetical protein Bmal10_03002483 [Burkholderia mallei 10399]
gi|121600228|ref|YP_992011.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia mallei SAVP1]
gi|124384069|ref|YP_001028458.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia mallei NCTC 10229]
gi|52208912|emb|CAH34851.1| putative N-acetylmuramoyl-L-alanine amidase [Burkholderia
pseudomallei K96243]
gi|52428576|gb|AAU49169.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia mallei ATCC 23344]
gi|76580202|gb|ABA49677.1| N-acetylmuramoyl-L-alanine amidase, AMIC precursor protein
[Burkholderia pseudomallei 1710b]
gi|121229038|gb|ABM51556.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia mallei SAVP1]
gi|124292089|gb|ABN01358.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia mallei NCTC 10229]
gi|147745374|gb|EDK52454.1| N-acetylmuramoyl-L-alanine amidase domain protein [Burkholderia
mallei FMH]
gi|148029342|gb|EDK87247.1| N-acetylmuramoyl-L-alanine amidase domain protein [Burkholderia
mallei 2002721280]
Length = 514
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 114/238 (47%), Gaps = 29/238 (12%)
Query: 31 RAFTVVIDAGHGGHDSGAVGNG-LREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R TV ID GHGG D GA+G G EK I L +A ++ I + P+++ + TR+ DFFV
Sbjct: 280 RLLTVAIDPGHGGEDPGAIGGGGTYEKHIALDIAKKLRAKIDAA-PNMRAMMTRDADFFV 338
Query: 90 TLMGRAEYANKNNADLFISIHVNS----QERG--------HGGYGTETYVMGHERNSKNM 137
L R + A + ADLF+SIH ++ RG HG + ++ NS ++
Sbjct: 339 PLNVRVQKARRVGADLFVSIHADAFTTPSARGSSVFALSDHGASSAAARWLANKENSSDL 398
Query: 138 AVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKG 197
+ + +D FD S+ + I L Y + + ++ KG
Sbjct: 399 I-----GGINIKTQDVAVNRALFD-MSTTAQIRDSLRYGNYVLREVGGINKLHKG----- 447
Query: 198 RHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
V+ AVL +PS+LVE FISNP E R L +A RD++A AI RG RY
Sbjct: 448 ----SVEQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDAYRDQMADAIFRGIKRY 501
>gi|126449032|ref|YP_001079693.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia mallei NCTC 10247]
gi|126241902|gb|ABO04995.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia mallei NCTC 10247]
Length = 482
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 114/238 (47%), Gaps = 29/238 (12%)
Query: 31 RAFTVVIDAGHGGHDSGAVGNG-LREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R TV ID GHGG D GA+G G EK I L +A ++ I + P+++ + TR+ DFFV
Sbjct: 248 RLLTVAIDPGHGGEDPGAIGGGGTYEKHIALDIAKKLRAKIDAA-PNMRAMMTRDADFFV 306
Query: 90 TLMGRAEYANKNNADLFISIHVNS----QERG--------HGGYGTETYVMGHERNSKNM 137
L R + A + ADLF+SIH ++ RG HG + ++ NS ++
Sbjct: 307 PLNVRVQKARRVGADLFVSIHADAFTTPSARGSSVFALSDHGASSAAARWLANKENSSDL 366
Query: 138 AVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKG 197
+ + +D FD S+ + I L Y + + ++ KG
Sbjct: 367 I-----GGINIKTQDVAVNRALFD-MSTTAQIRDSLRYGNYVLREVGGINKLHKG----- 415
Query: 198 RHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
V+ AVL +PS+LVE FISNP E R L +A RD++A AI RG RY
Sbjct: 416 ----SVEQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDAYRDQMADAIFRGIKRY 469
>gi|156932709|ref|YP_001436625.1| hypothetical protein ESA_00494 [Enterobacter sakazakii ATCC
BAA-894]
gi|156530963|gb|ABU75789.1| hypothetical protein ESA_00494 [Enterobacter sakazakii ATCC
BAA-894]
Length = 417
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/243 (32%), Positives = 122/243 (50%), Gaps = 20/243 (8%)
Query: 24 PLEGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYT 82
P + R+R ++ID GHGG D GA+G N REKD+ L +A R+ LI+ + ++K T
Sbjct: 179 PGKAGRDRPIVIMIDPGHGGEDPGAIGKNKTREKDVVLQIARRLRALIE-REANMKAFMT 237
Query: 83 REKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VV 140
R +D F+ L R A K ADLF+SIH ++ G+ + + + + A +
Sbjct: 238 RNEDIFIPLKVRVAKAQKQRADLFVSIHADAFT-SRAARGSSVFALSTKGATSTAAKYLA 296
Query: 141 QRENAVILMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQI--QKGFVA 195
Q +NA L+ G +S + Y+ MF+++Q+ S+K +++ + G V
Sbjct: 297 QTQNAADLV---------GGVSKSGDVYLDHTMFDMVQSLTISDSLKFGKEVLGRLGRVN 347
Query: 196 KGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
K H V AVL +PS+LVE FISN E R L + + E+A +I G Y
Sbjct: 348 K-LHKNKVDQAGFAVLKAPDIPSILVETAFISNEEEERKLRTATFQQEVAESILAGIKAY 406
Query: 256 KED 258
D
Sbjct: 407 FAD 409
>gi|15611776|ref|NP_223427.1| putative PROBABLE N-ACETYLMURAMOYL-L-ALANINE AMIDASE [Helicobacter
pylori J99]
gi|4155265|gb|AAD06284.1| putative PROBABLE N-ACETYLMURAMOYL-L-ALANINE AMIDASE [Helicobacter
pylori J99]
Length = 469
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 119/230 (51%), Gaps = 22/230 (9%)
Query: 35 VVIDAGHGGHDSGAV-GNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
+V+DAGHGG D GA+ N + EKDI L V + + +K + VL TR+KD ++ L+
Sbjct: 248 IVLDAGHGGKDCGAMSANLVCEKDIVLEVVKFLHKELKKR--GYSVLLTRDKDIYIDLVA 305
Query: 94 RAEYANKNNADLFISIHVNS--QERGHGGYGTETYVMGHERNSKNMAVVQRENAVILMEK 151
R E ANK ADLFIS+H NS + +G ETY + R+ + V ++EN +
Sbjct: 306 RTELANKKGADLFISVHANSIPKRSTSNAHGIETYFLSTARSERARKVAEQENKDDVNLM 365
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGRH------DRGVKL 205
DY + + +++ I+ S KLA +Q G + R D GV+
Sbjct: 366 DYFSKSLFLNSLNTQRLIV-----------SNKLAIDVQYGMLQSVRKNYPDVVDGGVRE 414
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
G VL + MPS+L+E+G+ S+ E++ + S+ + LA IA G +
Sbjct: 415 GPFWVLAGALMPSILIEIGYNSHAIESKRIQSKPYQKILAKGIADGIDSF 464
>gi|17227589|ref|NP_484137.1| N-acetylmuramoyl-L-alanine amidase [Nostoc sp. PCC 7120]
gi|6969396|gb|AAF33754.1|AF216288_1 putative N-acetylmuramoyl-L-alanine amidase [Nostoc sp. PCC 7120]
gi|17135071|dbj|BAB77617.1| N-acetylmuramoyl-L-alanine amidase [Nostoc sp. PCC 7120]
Length = 627
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 104/236 (44%), Gaps = 57/236 (24%)
Query: 23 LPLEGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLY 81
+P R R VVID GHGG DSGA G GL EKD+ L + LR+ +++ ++ +
Sbjct: 442 IPRSVPRGR-LLVVIDPGHGGKDSGAPGLGGLLEKDVVLPIGLRIAAILEQN--GIQAVL 498
Query: 82 TREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQ 141
TR+ DFFV L GR + A + NA LF+SIH NS E G E Y
Sbjct: 499 TRDADFFVELQGRVDIAERANATLFVSIHANSVEGRPDVNGLEVY--------------- 543
Query: 142 RENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK--GRH 199
Y D LA+ ++K +
Sbjct: 544 ------------------------------------YYDSGYALAESVRKTILQSIGTLK 567
Query: 200 DRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
DRG + VL S+MPS+LVE G++S + LGS ++ +A AIARG +Y
Sbjct: 568 DRGTRKARFYVLRKSSMPSILVETGYMSGREDNPRLGSPEYQNRMADAIARGILQY 623
>gi|146310017|ref|YP_001175091.1| N-acetylmuramoyl-L-alanine amidase [Enterobacter sp. 638]
gi|145316893|gb|ABP59040.1| N-acetylmuramoyl-L-alanine amidase [Enterobacter sp. 638]
Length = 447
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 75/238 (31%), Positives = 118/238 (49%), Gaps = 11/238 (4%)
Query: 24 PLEGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYT 82
P + + IDAGHGG D GA+G G REK++ +A+A ++ R + P K + T
Sbjct: 185 PATNTSDEKVIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKL-RERLNDDPMFKGVMT 243
Query: 83 REKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQR 142
R+ D+F+++MGR++ A K NA+ +SIH ++ G +V+ + R + MA
Sbjct: 244 RDGDYFISVMGRSDVARKQNANFLVSIHADAAP-NRSATGASVWVLSNRRANSEMANWLE 302
Query: 143 EN---AVILMEKDYRTVYKGFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKG 197
E+ + +L DP S++ + F Q D + + Q+Q
Sbjct: 303 EHEKQSELLGGAGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATNVISQLQS---VGA 359
Query: 198 RHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H R + +L VL +PS+LVE GFISN E R L S++ + E+A AI G Y
Sbjct: 360 IHKRRPEHASLGVLRSPDIPSILVETGFISNNGEERLLASDSYQQEIADAIYNGLRNY 417
>gi|28899594|ref|NP_799199.1| N-acetylmuramoyl-L-alanine amidase [Vibrio parahaemolyticus RIMD
2210633]
gi|28807830|dbj|BAC61083.1| N-acetylmuramoyl-L-alanine amidase [Vibrio parahaemolyticus RIMD
2210633]
Length = 571
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 92/293 (31%), Positives = 141/293 (48%), Gaps = 37/293 (12%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVGNGLR--EKDINLAVALRVGRLIKSKHPDVKVLYTREK 85
QR + +VID GHGG D G++G R EKD L+++ ++ + + P +K TR
Sbjct: 162 QRAQEVLIVIDPGHGGEDPGSIGPSRRKYEKDAVLSISRKLAAQLDAT-PGIKTRMTRTG 220
Query: 86 DFFVTLMGRAEYANKNNADLFISIHVNS----QERGHGGYGTET---------YVMGHER 132
D+FV L R +A +N+A L IS+H ++ Q RG + T +V HE+
Sbjct: 221 DYFVNLNRRVAFARENDAHLLISVHADAFTSPQPRGGSVFVLNTRRANTEIARWVENHEK 280
Query: 133 NSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI--Q 190
S+ + NA + KD D + S S Q + KLA +I +
Sbjct: 281 QSELLG--GSGNAFVTNTKDRNVNQTLLDLQFSHS-----------QKEGYKLATEILGE 327
Query: 191 KGFVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIAR 250
G VA + + + +LAVL +PSVLVE GFISNP E + L A +D+LA AI++
Sbjct: 328 MGRVAHLHNTKPINT-SLAVLRSPQIPSVLVETGFISNPTEEKLLFQRAHQDKLAQAISK 386
Query: 251 GFARYKEDYDRRSGKV----SEPAPQATEEEDKVEVEPEDNGISSVADMSDGK 299
+Y +D + G V S+P + + + V G +S A M++ K
Sbjct: 387 AVVKYLKD-NPPEGTVFSPSSKPMVHIVKRGESLSVIANKYGTNSKALMAENK 438
>gi|58582356|ref|YP_201372.1| N-acetylmuramoyl-L-alanine amidase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58426950|gb|AAW75987.1| N-acetylmuramoyl-L-alanine amidase [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 577
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 82/232 (35%), Positives = 115/232 (49%), Gaps = 17/232 (7%)
Query: 27 GQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREK 85
Q R V ID GHGG D GA+G G REKD+ LAV + R I + P +K TR+
Sbjct: 322 AQGMRVLIVAIDPGHGGQDPGAIGPTGKREKDVTLAVGRELARQINAT-PGMKAYLTRDT 380
Query: 86 DFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRE 143
D F+ L RA+ A AD+FISIH ++ E G+ YV+ + S A + +E
Sbjct: 381 DVFIPLPMRAQKARAAKADIFISIHADAAEN-RSATGSSVYVLSTKGASSQRARWLADKE 439
Query: 144 NAVILMEKDYRTVYKGFDPRSSESY---IMFELMQNTYQDQSIKLAQQIQKGFVAKGR-H 199
NA L+ G + +ES ++ +L Q+ + S A + G G H
Sbjct: 440 NAADLV--------GGVRLQQTESTLANVLLDLAQSGHMKASEDAAGHVLGGLKRIGNNH 491
Query: 200 DRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARG 251
++ N AVL S MP++LVE FISNP E R L A + +A+A+ G
Sbjct: 492 KSQLERANFAVLRTSDMPAMLVETAFISNPDEERRLVDPAYQRRIAAAVLDG 543
>gi|121604078|ref|YP_981407.1| N-acetylmuramoyl-L-alanine amidase [Polaromonas naphthalenivorans
CJ2]
gi|120593047|gb|ABM36486.1| N-acetylmuramoyl-L-alanine amidase [Polaromonas naphthalenivorans
CJ2]
Length = 519
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 23/238 (9%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
+ +R V +D GHGG D GA+G G REKD+ L +A R+ I ++ P+++ TR+ D
Sbjct: 282 KTDRLVIVALDPGHGGEDPGAIGPGGTREKDVVLQIAHRLRDRI-NQQPNMRAYLTRDAD 340
Query: 87 FFVTLMGRAEYANKNNADLFISIHVNS--QERGHGGYGTETYVMGHERNSKNMA--VVQR 142
FFV L R + A ADLFIS+H ++ E G + + + S + A + +
Sbjct: 341 FFVPLHVRVQKARSVKADLFISLHADAFFTETPQGA---SVFALSEKGASSSAARWIADK 397
Query: 143 ENAVILMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQI--QKGFVAKG 197
EN+ L+ G + ++ ++ + MF++ + S+KL + + G V K
Sbjct: 398 ENSADLV--------GGINVKAKDAQVQRAMFDMSTTAQINDSMKLGSAMLGEIGNVGK- 448
Query: 198 RHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H V+ + AVL +PSVLVE FISNP E L S+ + +LA A+ RG +RY
Sbjct: 449 LHKPRVEQASFAVLKAPDIPSVLVETAFISNPMEEARLRSDGYQIQLADALMRGISRY 506
>gi|15600731|ref|NP_254225.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa PAO1]
gi|84318217|ref|ZP_00966645.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa
C3719]
gi|107104640|ref|ZP_01368558.1| hypothetical protein PaerPA_01005719 [Pseudomonas aeruginosa PACS2]
gi|9951877|gb|AAG08923.1|AE004966_5 N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa PAO1]
gi|126169715|gb|EAZ55226.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa C3719]
Length = 397
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 87/262 (33%), Positives = 121/262 (46%), Gaps = 15/262 (5%)
Query: 4 KNHTHYLLLWMTAL------LLIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVGN-GLREK 56
K H L L+ AL +L + PL R VV+DAGHGG D GAVG+ G REK
Sbjct: 121 KGHRLVLDLYPQALAAPPEPMLALARPLPST-GRDILVVVDAGHGGKDPGAVGSKGEREK 179
Query: 57 DINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQER 116
D+ LA+A + R I + K R D FV L R E A + NAD+F+S+H ++ R
Sbjct: 180 DVALAIARLLARRI-DREKGFKARLVRNGDVFVPLRKRPEVARRYNADMFVSVHADAAPR 238
Query: 117 GHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELM 174
G Y + S MA + +REN L+ +G D + ++ ++
Sbjct: 239 LTAS-GASVYALSEHGASSTMARWMAERENGADLIGNSGNLPLQGRD--KVLAGVILDMA 295
Query: 175 QNTYQDQSIKLAQQIQKGFV-AKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEAR 233
++ S+ L + H + V+ AVL +PS+LVE GFISN + R
Sbjct: 296 LSSTIASSLDLGHSVLGQLSDVTALHQKRVEQAGFAVLKSPDIPSILVETGFISNRGDCR 355
Query: 234 YLGSEAGRDELASAIARGFARY 255
L E R LA AI G Y
Sbjct: 356 RLMDERHRQRLAEAIFAGVQGY 377
>gi|118717292|ref|ZP_01569828.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia multivorans ATCC
17616]
gi|118659692|gb|EAV66436.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia multivorans ATCC
17616]
Length = 505
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 119/238 (50%), Gaps = 19/238 (7%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
+G R TV ID GHGG D GA+G G EK I L +A ++ I P+++ + TR+
Sbjct: 266 KGGTVRLLTVAIDPGHGGEDPGAIGGAGTYEKHIALDIAKKLRAKIDGA-PNMRAMMTRD 324
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQR 142
DFFV L R + A + ADLF+SIH ++ G+ + + S A + +
Sbjct: 325 ADFFVPLNVRVQKARRVGADLFVSIHADAFTTP-SARGSSVFALSDHGASSAAARWLANK 383
Query: 143 ENAVILMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQIQK--GFVAKG 197
ENA L+ G + ++ ++ + +F++ S++ + K G + K
Sbjct: 384 ENASDLI--------GGINIKTQDAAVSRALFDMSTTAQIRDSLRYGNYVLKEVGSINK- 434
Query: 198 RHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H V+ AVL +PS+LVE FISNP E R L ++ RD++A AI RG RY
Sbjct: 435 LHKGSVEQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDSYRDQMADAIFRGIKRY 492
>gi|126442238|ref|YP_001057958.1| putative N-acetylmuramoyl-L-alanine amidase [Burkholderia
pseudomallei 668]
gi|126452927|ref|YP_001065191.1| putative N-acetylmuramoyl-L-alanine amidase [Burkholderia
pseudomallei 1106a]
gi|134279753|ref|ZP_01766465.1| N-acetylmuramoyl-L-alanine amidase domain protein [Burkholderia
pseudomallei 305]
gi|126221731|gb|ABN85237.1| putative N-acetylmuramoyl-L-alanine amidase [Burkholderia
pseudomallei 668]
gi|126226569|gb|ABN90109.1| putative N-acetylmuramoyl-L-alanine amidase [Burkholderia
pseudomallei 1106a]
gi|134248953|gb|EBA49035.1| N-acetylmuramoyl-L-alanine amidase domain protein [Burkholderia
pseudomallei 305]
gi|147750719|gb|EDK57788.1| N-acetylmuramoyl-L-alanine amidase domain protein [Burkholderia
mallei JHU]
Length = 518
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 114/238 (47%), Gaps = 29/238 (12%)
Query: 31 RAFTVVIDAGHGGHDSGAVGNG-LREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R TV ID GHGG D GA+G G EK I L +A ++ I + P+++ + TR+ DFFV
Sbjct: 284 RLLTVAIDPGHGGEDPGAIGGGGTYEKHIALDIAKKLRAKIDAA-PNMRAMMTRDADFFV 342
Query: 90 TLMGRAEYANKNNADLFISIHVNS----QERG--------HGGYGTETYVMGHERNSKNM 137
L R + A + ADLF+SIH ++ RG HG + ++ NS ++
Sbjct: 343 PLNVRVQKARRVGADLFVSIHADAFTTPSARGSSVFALSDHGASSAAARWLANKENSSDL 402
Query: 138 AVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKG 197
+ + +D FD S+ + I L Y + + ++ KG
Sbjct: 403 I-----GGINIKTQDVAVNRALFD-MSTTAQIRDSLRYGNYVLREVGGINKLHKG----- 451
Query: 198 RHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
V+ AVL +PS+LVE FISNP E R L +A RD++A AI RG RY
Sbjct: 452 ----SVEQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDAYRDQMADAIFRGIKRY 505
>gi|153840109|ref|ZP_01992776.1| N-acetylmuramoyl-L-alanine amidase [Vibrio parahaemolyticus AQ3810]
gi|149746288|gb|EDM57360.1| N-acetylmuramoyl-L-alanine amidase [Vibrio parahaemolyticus AQ3810]
Length = 565
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 92/293 (31%), Positives = 141/293 (48%), Gaps = 37/293 (12%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVGNGLR--EKDINLAVALRVGRLIKSKHPDVKVLYTREK 85
QR + +VID GHGG D G++G R EKD L+++ ++ + + P +K TR
Sbjct: 156 QRAQEVLIVIDPGHGGEDPGSIGPSRRKYEKDAVLSISRKLAAQLDAT-PGIKTRMTRTG 214
Query: 86 DFFVTLMGRAEYANKNNADLFISIHVNS----QERGHGGYGTET---------YVMGHER 132
D+FV L R +A +N+A L IS+H ++ Q RG + T +V HE+
Sbjct: 215 DYFVNLNRRVAFARENDAHLLISVHADAFTSPQPRGGSVFVLNTRRANTEIARWVENHEK 274
Query: 133 NSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI--Q 190
S+ + NA + KD D + S S Q + KLA +I +
Sbjct: 275 QSELLG--GSGNAFVTNTKDRNVNQTLLDLQFSHS-----------QKEGYKLATEILGE 321
Query: 191 KGFVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIAR 250
G VA + + + +LAVL +PSVLVE GFISNP E + L A +D+LA AI++
Sbjct: 322 MGRVAHLHNTKPINT-SLAVLRSPQIPSVLVETGFISNPTEEKLLFQRAHQDKLAQAISK 380
Query: 251 GFARYKEDYDRRSGKV----SEPAPQATEEEDKVEVEPEDNGISSVADMSDGK 299
+Y +D + G V S+P + + + V G +S A M++ K
Sbjct: 381 AVVKYLKD-NPPEGTVFSPSSKPMVHIVKRGESLSVIANKYGTNSKALMAENK 432
>gi|88704499|ref|ZP_01102213.1| N-acetylmuramoyl-L-alanine amidase [gamma proteobacterium KT 71]
gi|88701550|gb|EAQ98655.1| N-acetylmuramoyl-L-alanine amidase [Congregibacter litoralis KT71]
Length = 440
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 114/230 (49%), Gaps = 13/230 (5%)
Query: 31 RAFTVVIDAGHGGHDSGAVGNG-LREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R + IDAGHGG D GA G G LREK + L +A + L K+ L R D++V
Sbjct: 153 RDIVIAIDAGHGGEDPGASGPGRLREKQVVLEIAKELHELFKADQGFAPTL-IRSGDYYV 211
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVI 147
+L GR + A K AD+F+S+H ++ R G Y + + A + QRENA
Sbjct: 212 SLQGRRDLARKRQADMFVSVHADAF-RDKRARGASVYALSTRGATSTTASYLAQRENAAD 270
Query: 148 LMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI--QKGFVAKGRHDRGVKL 205
L+ V G D + + + +L D S+ + + + G A+ H + V+
Sbjct: 271 LLGG----VSLG-DKEDALAMTLADLSMTATLDSSLNVGASVLGEMGRFAR-LHKKQVEQ 324
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VL +PS+LVE GFISNP EA+ L S + R +A AI RG ++
Sbjct: 325 AGFVVLKSPDVPSILVETGFISNPEEAKKLASPSYRKRMAKAIHRGIVQW 374
>gi|84624235|ref|YP_451607.1| N-acetylmuramoyl-L-alanine amidase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|84368175|dbj|BAE69333.1| N-acetylmuramoyl-L-alanine amidase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 577
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 118/242 (48%), Gaps = 23/242 (9%)
Query: 23 LPLEGQR------NRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHP 75
LP E R R V ID GHGG D GA+G G REKD+ LAV + R I + P
Sbjct: 312 LPNEASRIKMAPGMRVLIVAIDPGHGGQDPGAIGPTGKREKDVTLAVGRELARQINAT-P 370
Query: 76 DVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSK 135
+K TR+ D F+ L RA+ A AD+FISIH ++ E G+ YV+ + S
Sbjct: 371 GMKAYLTRDTDVFIPLPMRAQKARAAKADIFISIHADAAE-NRSATGSSVYVLSTKGASS 429
Query: 136 NMA--VVQRENAVILMEKDYRTVYKGFDPRSSESY---IMFELMQNTYQDQSIKLAQQIQ 190
A + +ENA L+ G + +ES ++ +L Q+ + S A +
Sbjct: 430 QRARWLADKENAADLV--------GGVRLQQTESTLANVLLDLAQSGHMKASEDAAGHVL 481
Query: 191 KGFVAKGR-HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIA 249
G G H ++ N AVL S MP++LVE FISNP E R L A + +A+A+
Sbjct: 482 GGLKRIGNNHKSQLERANFAVLRTSDMPAMLVETAFISNPDEERRLVDPAYQRRIAAAVL 541
Query: 250 RG 251
G
Sbjct: 542 DG 543
>gi|78067364|ref|YP_370133.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia sp. 383]
gi|77968109|gb|ABB09489.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia sp. 383]
Length = 508
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/243 (32%), Positives = 114/243 (46%), Gaps = 29/243 (11%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVGNG-LREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
+G R TV ID GHGG D GA+G G EK I L +A ++ I P+++ + TR+
Sbjct: 269 KGGTVRLLTVAIDPGHGGEDPGAIGGGGTYEKHIALDIAKKLRAKIDGA-PNMRAMMTRD 327
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNS----QERG--------HGGYGTETYVMGHER 132
DFFV L R + A + ADLF+SIH ++ RG HG M ++
Sbjct: 328 ADFFVPLNVRVQKARRVGADLFVSIHADAFTTPSARGSSVFALSDHGATSAAARWMANKE 387
Query: 133 NSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKG 192
NS ++ I ++ TV + S+ + I L Y + + ++ KG
Sbjct: 388 NSSDLI------GGINIKTADATVNRALFDMSTTAQIRDSLRYGNYVLKEVGGINKLHKG 441
Query: 193 FVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGF 252
V+ AVL +PS+LVE FISNP E L ++ RD++A AI RG
Sbjct: 442 ---------SVEQAGFAVLKAPDIPSILVETAFISNPEEESRLNDDSYRDQMADAIFRGI 492
Query: 253 ARY 255
RY
Sbjct: 493 KRY 495
>gi|77461877|ref|YP_351384.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas fluorescens PfO-1]
gi|77385880|gb|ABA77393.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas fluorescens PfO-1]
Length = 390
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 115/230 (50%), Gaps = 10/230 (4%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVA-LRVGRLIKSKHPDVKVLYTREKDFF 88
R VV+D GHGG D GA+G G REKD+ L++A L RL + K DVK++ R DFF
Sbjct: 144 RDIMVVVDPGHGGKDPGAIGAKGEREKDVVLSIAQLLARRLKREKGFDVKLV--RNDDFF 201
Query: 89 VTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVM--GHERNSKNMAVVQRENAV 146
V L R E A ++ AD+FIS+H ++ R G Y + G ++ + QREN V
Sbjct: 202 VPLRKRVEIARQHKADMFISVHADAAPRLTAS-GASVYCLSEGGATSATARFMAQRENGV 260
Query: 147 ILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA-KGRHDRGVKL 205
L+ K DP + ++ ++ N S++L + H + V+
Sbjct: 261 DLLGATSLLNLKDKDPMLAG--VILDMSMNATIAASLQLGNTVLSSLAGITTLHQKRVEQ 318
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
AVL +PS+LVE GFISN +++ L + + +A + G RY
Sbjct: 319 AGFAVLKSPDVPSILVETGFISNARDSQRLVTARHQQAVADGLFEGLQRY 368
>gi|149377527|ref|ZP_01895268.1| N-acetylmuramoyl-L-alanine amidase [Marinobacter algicola DG893]
gi|149358219|gb|EDM46700.1| N-acetylmuramoyl-L-alanine amidase [Marinobacter algicola DG893]
Length = 437
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 82/239 (34%), Positives = 119/239 (49%), Gaps = 28/239 (11%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R VV+DAGHGG D GA+G G REKD+ L ++ + LI +K P TR D+++
Sbjct: 142 RDIIVVVDAGHGGEDPGAIGPRGTREKDVVLRMSKTLAELIDAK-PGYTARLTRTGDYYI 200
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQR----ENA 145
L R A K+NADLF+S+H ++ + R + A+ QR E A
Sbjct: 201 DLRSRTLLARKHNADLFVSVHADA------------FRTPQPRGASVFALSQRGATSETA 248
Query: 146 VILMEKDYRTVYKG------FDPRSSE-SYIMFELMQNTYQDQSIKLAQQI--QKGFVAK 196
L + + R+ G D R + ++ +L + S+ + I + G VAK
Sbjct: 249 RWLAKTENRSDLIGGAGGVSLDGRDDMLAGVLLDLSMTASINSSLGVGDSILGRLGSVAK 308
Query: 197 GRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H +GV+ AVL +PSVLVE GFISNP E + L S R++L+ A+ RG Y
Sbjct: 309 -LHKKGVEQAAFAVLKSPDIPSVLVEAGFISNPKEEQNLSSAWYREKLSQAVFRGIDDY 366
>gi|148358565|ref|YP_001249772.1| N-acetylmuramoyl-L-alanine amidase [Legionella pneumophila str.
Corby]
gi|148280338|gb|ABQ54426.1| N-acetylmuramoyl-L-alanine amidase [Legionella pneumophila str.
Corby]
Length = 476
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 92/328 (28%), Positives = 142/328 (43%), Gaps = 53/328 (16%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R VV+DAGHGG D GA G EKD+ LA+ L++ RLI + P ++ + TR D++V
Sbjct: 186 RDVVVVLDAGHGGKDPGARGPRRSNEKDVVLAITLKLKRLI-DRQPGMRAVLTRSGDYYV 244
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQREN--- 144
L R + A K N D+FISIH ++ H G + + + A + ++EN
Sbjct: 245 GLRQRLDIARKYNGDVFISIHADAFNNPHSN-GASVFALSQRGATSEAARWLAEKENYSE 303
Query: 145 --AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA-KGRHDR 201
V L E D D ++ +L Q + +++ ++ H+
Sbjct: 304 LGGVNLGELD--------DSNGVVRSVLIDLSQTATINAGLEMGGKVLGQLDNFTNLHNN 355
Query: 202 GVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDR 261
V+ VL +PS+LVE GFISNP E R L + A ++ L+ AI +G Y D+
Sbjct: 356 KVEQARFVVLKSPDIPSILVETGFISNPREERNLTNPAYQERLSQAIFQGLKNYFWDH-- 413
Query: 262 RSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKT 321
P T E I+P H VK E +
Sbjct: 414 --------PPHGTRIE----------------------AMISPNFHIVKKGETLPAIAAR 443
Query: 322 YKIQI--LSSTTKLKNGDKRLKGYKVVI 347
Y++ + L S +L+ + + G K+VI
Sbjct: 444 YRVSVSALQSINRLQARARLMPGQKLVI 471
>gi|116053689|ref|YP_794016.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115588910|gb|ABJ14925.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 397
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 87/262 (33%), Positives = 120/262 (45%), Gaps = 15/262 (5%)
Query: 4 KNHTHYLLLWMTAL------LLIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVGN-GLREK 56
K H L L+ AL +L + PL R VV+DAGHGG D GAVG+ G REK
Sbjct: 121 KGHRLVLDLYPQALAAPPEPMLALARPLPST-GRDILVVVDAGHGGKDPGAVGSKGEREK 179
Query: 57 DINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQER 116
D+ LA+A + R I + K R D FV L R E A + NAD+F+S+H ++ R
Sbjct: 180 DVALAIARLLARRI-DREKGFKARLVRNGDVFVPLRKRPEVARRYNADMFVSVHADAAPR 238
Query: 117 GHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELM 174
G Y + S MA + REN L+ +G D + ++ ++
Sbjct: 239 LTAS-GASVYALSEHGASSTMARWMADRENGADLIGNSGNLPLQGRD--KVLAGVILDMA 295
Query: 175 QNTYQDQSIKLAQQIQKGFV-AKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEAR 233
++ S+ L + H + V+ AVL +PS+LVE GFISN + R
Sbjct: 296 LSSTIASSLDLGHSVLGQLSDVTALHQKRVEQAGFAVLKSPDIPSILVETGFISNRGDCR 355
Query: 234 YLGSEAGRDELASAIARGFARY 255
L E R LA AI G Y
Sbjct: 356 RLMDERHRQRLAEAIFAGVQGY 377
>gi|113866624|ref|YP_725113.1| N-Acetylmuramoyl-L-alanine amidase [Ralstonia eutropha H16]
gi|113525400|emb|CAJ91745.1| N-Acetylmuramoyl-L-alanine amidase [Ralstonia eutropha H16]
Length = 500
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 78/241 (32%), Positives = 123/241 (51%), Gaps = 35/241 (14%)
Query: 31 RAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R TV ID GHGG D GA+G G REKD+ L +A R+ I ++ P+++ + TR+ DFFV
Sbjct: 266 RLLTVAIDPGHGGEDPGAIGAAGSREKDVVLQIAHRLRAKIDAQ-PNMRAMMTRDADFFV 324
Query: 90 TLMGRAEYANKNNADLFISIHVNS----QERGHGGYGTETYVMGHERNSKNMA---VVQR 142
L R + A + ADLF+SIH ++ + RG + ER + + A + +
Sbjct: 325 PLNVRVQKARRVQADLFVSIHADAFLSPEARGASVFALS------ERGASSTAARWLANK 378
Query: 143 ENAVILM------EKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI--QKGFV 194
ENA L+ KD + + ++ +L + S+++ + + + G +
Sbjct: 379 ENASDLIGGANMGNKDAQV-----------ARVLLDLSTTAQINDSLQVGKAVLGEIGGI 427
Query: 195 AKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFAR 254
K H V+ AVL +PS+L+E FISNP E R L A +++LA+AI +G
Sbjct: 428 NK-LHKGSVEQAGFAVLKAPDIPSILIETAFISNPEEERKLNDNAHQEQLANAILKGIRS 486
Query: 255 Y 255
Y
Sbjct: 487 Y 487
>gi|115352662|ref|YP_774501.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia cepacia AMMD]
gi|115282650|gb|ABI88167.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia cepacia AMMD]
Length = 505
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 114/243 (46%), Gaps = 29/243 (11%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVGNG-LREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
+G R TV ID GHGG D GA+G G EK I L +A ++ I P+++ + TR+
Sbjct: 266 KGGTMRLLTVAIDPGHGGEDPGAIGGGGTYEKHIALDIAKKLRAKIDGA-PNMRAMMTRD 324
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNS----QERG--------HGGYGTETYVMGHER 132
DFFV L R + A + ADLF+SIH ++ RG HG M ++
Sbjct: 325 ADFFVPLNVRVQKARRVGADLFVSIHADAFTTPSARGSSVFALSDHGATSAAARWMANKE 384
Query: 133 NSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKG 192
NS ++ + + +D FD S+ + I L Y + + ++ KG
Sbjct: 385 NSSDLI-----GGINIKTQDAAVSRALFD-MSTTAQIRDSLRYGGYVLKEVGGINKLHKG 438
Query: 193 FVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGF 252
V+ AVL +PS+LVE FISNP E L E+ RD++A AI RG
Sbjct: 439 ---------SVEQAGFAVLKAPDIPSILVETAFISNPEEESRLNDESYRDQMADAIFRGI 489
Query: 253 ARY 255
RY
Sbjct: 490 KRY 492
>gi|149194048|ref|ZP_01871146.1| N-acetylmuramoyl-L-alanine amidase [Caminibacter mediatlanticus
TB-2]
gi|149136001|gb|EDM24479.1| N-acetylmuramoyl-L-alanine amidase [Caminibacter mediatlanticus
TB-2]
Length = 422
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 116/231 (50%), Gaps = 16/231 (6%)
Query: 30 NRAFTVVIDAGHGGHDSGAVGNGLR-EKDINLAVALRVGRLIKSKHPDVKVLYTREKDFF 88
NR +VID GHGG DSG +G G R EK L +A ++ ++K K V TR+ D+F
Sbjct: 198 NRKKVIVIDPGHGGKDSGGIGIGNRYEKYAVLNIAKKLANILKRK--GYIVYLTRKSDYF 255
Query: 89 VTLMGRAEYANKNNADLFISIHVN-SQERGHGGYGTETYVMGHERNSKNMAVVQRENAVI 147
V L R YAN A+LFIS+H N + + G ETY + RN + + V + EN I
Sbjct: 256 VPLKKRTHYANLKKANLFISLHCNIAPKHITSPRGIETYYLSPTRNERAIEVARLENKEI 315
Query: 148 --LMEKDYRTVYKGFDPRSSESYIMFEL-MQNTYQDQSIKLAQQIQKGFVAKGRHDRGVK 204
L D R V + S F + +QN + K + I+ G GV+
Sbjct: 316 ANLNYLDQRVVLNFLNKDRIISSQKFGIDVQNNIINTLRKKYKYIKNG---------GVR 366
Query: 205 LGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VLV + MP++L+ELG+++NP E + L + + LA IA+G Y
Sbjct: 367 PAPFWVLVGTQMPAILIELGYLTNPLEVKRLFNPTYQYYLAKGIAKGVDSY 417
>gi|145300257|ref|YP_001143098.1| N-acetylmuramoyl-L-alanine amidase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853029|gb|ABO91350.1| N-acetylmuramoyl-L-alanine amidase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 516
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 21/277 (7%)
Query: 27 GQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREK 85
G + + + ID GHGG D G++G EK + LAV+ ++ LI + P ++ + TR
Sbjct: 141 GGKGKGVVIAIDPGHGGEDPGSIGPRRTYEKRVTLAVSQKLAALI-DREPGMRAVLTRRG 199
Query: 86 DFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAV-VQREN 144
D+FV L R+E A K ADL +S+H +S G +V+ R ++ M ++++
Sbjct: 200 DYFVDLNKRSEIARKAKADLLVSVHADSFHNS-TPRGASVWVLSTNRANREMGSWLEKQE 258
Query: 145 AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGV 203
+ V DP + +L + + + +++QI + R H +
Sbjct: 259 KQGELLGGVGKVLAESDPNPYLAQTFLDLSMDKSRAEGYDVSRQILRSMGKVARLHKKAP 318
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRR- 262
+ +LAVL +PSVLVE GFISN AE + L + A +D+LA AI G Y + +
Sbjct: 319 EHASLAVLKAPDIPSVLVETGFISNHAEEKLLATPAYQDKLARAIFEGIRNYYRAHPTKG 378
Query: 263 -----SGKVSEPA----------PQATEEEDKVEVEP 284
G+ S PA P A + +V+ +P
Sbjct: 379 AMLTGKGQASRPAAVSRPVAVNKPAAVSKPVQVQSQP 415
>gi|88810489|ref|ZP_01125746.1| N-acetylmuramoyl-L-alanine amidase [Nitrococcus mobilis Nb-231]
gi|88792119|gb|EAR23229.1| N-acetylmuramoyl-L-alanine amidase [Nitrococcus mobilis Nb-231]
Length = 424
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 85/236 (36%), Positives = 118/236 (50%), Gaps = 11/236 (4%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
Q+ R V IDAGHGG D GA+G G EK I LA+A ++ LI ++ ++ + TRE D
Sbjct: 141 QQRRELVVAIDAGHGGVDPGAIGQRGTFEKTITLAIAQKLAELISAR-SGMRAVLTRESD 199
Query: 87 FFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQREN 144
+V L R A + +ADLFISIH +S G YV+ S A + QREN
Sbjct: 200 DYVGLRERTRLARQAHADLFISIHADSIGDSRA-RGASVYVLSPHGASTEAARLLAQREN 258
Query: 145 AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGV 203
+V ++ G D + ++ +L + + S LAQ + G H V
Sbjct: 259 SV---DRIGGVSLDGKDDLVAT--VLVDLSRAATIESSTHLAQSMLAVLDDVGELHKSSV 313
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDY 259
+ AVL MPSVLVE FISNP E L S + +LA A+ RG + Y E++
Sbjct: 314 ERAGFAVLKSLDMPSVLVESAFISNPREELRLRSSRFQWKLARALERGVSDYIEEF 369
>gi|52842904|ref|YP_096703.1| N-acetylmuramoyl-L-alanine amidase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52630015|gb|AAU28756.1| N-acetylmuramoyl-L-alanine amidase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 476
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 92/328 (28%), Positives = 142/328 (43%), Gaps = 53/328 (16%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R VV+DAGHGG D GA G EKD+ LA+ L++ RLI + P ++ + TR D++V
Sbjct: 186 RDVVVVLDAGHGGKDPGARGPRRSNEKDVVLAITLKLKRLI-DRQPGMRAVLTRSGDYYV 244
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQREN--- 144
L R + A K N D+FISIH ++ H G + + + A + ++EN
Sbjct: 245 GLRQRLDIARKYNGDVFISIHADAFNNPHSN-GASVFALSQRGATSEAARWLAEKENYSE 303
Query: 145 --AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA-KGRHDR 201
V L E D D ++ +L Q + +++ ++ H+
Sbjct: 304 LGGVNLGELD--------DSNGVVRSVLIDLSQTATINAGLEMGGKVLGQLDNFTNLHNN 355
Query: 202 GVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDR 261
V+ VL +PS+LVE GFISNP E R L + A ++ L+ AI +G Y D+
Sbjct: 356 KVEQARFVVLKSPDIPSILVETGFISNPREERNLTNPAYQERLSQAIFQGLKNYFWDH-- 413
Query: 262 RSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKT 321
P T E I+P H VK E +
Sbjct: 414 --------PPHGTRIE----------------------AMISPNFHIVKKGETLPAIAAR 443
Query: 322 YKIQI--LSSTTKLKNGDKRLKGYKVVI 347
Y++ + L S +L+ + + G K+VI
Sbjct: 444 YRVSVNALQSINRLQARARLMPGQKLVI 471
>gi|118027912|ref|ZP_01499375.1| cell wall hydrolase/autolysin [Burkholderia phymatum STM815]
gi|117985907|gb|EAV00283.1| cell wall hydrolase/autolysin [Burkholderia phymatum STM815]
Length = 515
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 74/232 (31%), Positives = 117/232 (50%), Gaps = 17/232 (7%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R TV ID GHGG D GA+G +G EK + L +A ++ I ++ P+++ + TR+ DFFV
Sbjct: 281 RLLTVAIDPGHGGEDPGAIGGSGTYEKHVALDIAKKLRAKIDAQ-PNMRAMMTRDADFFV 339
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVI 147
L R + A + ADLF+SIH ++ G+ + + S A + +EN+
Sbjct: 340 PLNVRVQKARRVGADLFVSIHADAFTTPEAS-GSSVFALSEHGASSAAARWMANKENS-- 396
Query: 148 LMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGV 203
G + +S+++ + +F++ S++ + K R H V
Sbjct: 397 ------SDQIGGINIKSADASVNRALFDMSTTAQIRDSMRYGTFVLKEIGGINRLHKGSV 450
Query: 204 KLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
+ AVL +PS+LVE FISNP E R L +A RD++A+AI G RY
Sbjct: 451 EQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDAYRDKMANAIMSGIKRY 502
>gi|21243140|ref|NP_642722.1| N-acetylmuramoyl-L-alanine amidase [Xanthomonas axonopodis pv.
citri str. 306]
gi|21108660|gb|AAM37258.1| N-acetylmuramoyl-L-alanine amidase [Xanthomonas axonopodis pv.
citri str. 306]
Length = 575
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 118/242 (48%), Gaps = 23/242 (9%)
Query: 23 LPLEGQR------NRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHP 75
LP E R R V ID GHGG D GA+G G REKD+ LAV + R + + P
Sbjct: 310 LPSEASRIKMAPGMRPLVVAIDPGHGGQDPGAMGPTGKREKDVTLAVGRELARQVNAT-P 368
Query: 76 DVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSK 135
+K TR+ D F+ L RA+ A AD+FISIH ++ E G+ YV+ + S
Sbjct: 369 GMKAYLTRDTDVFIPLPMRAQKARAAKADIFISIHADAAE-NRSATGSSVYVLSTKGASS 427
Query: 136 NMA--VVQRENAVILMEKDYRTVYKGFDPRSSESY---IMFELMQNTYQDQSIKLAQQIQ 190
A + +ENA L+ G + +ES ++ +L Q+ + S A +
Sbjct: 428 QRARWLADKENAADLV--------GGVRLQQTESTLANVLLDLAQSGHMKASEDAAGHVL 479
Query: 191 KGFVAKGR-HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIA 249
G G H ++ N AVL S MP++LVE FISNP E R L A + +ASA+
Sbjct: 480 GGLKRIGNNHKPQLERANFAVLRTSDMPAMLVETAFISNPDEERRLIDPAYQRRIASAVL 539
Query: 250 RG 251
G
Sbjct: 540 DG 541
>gi|52080951|ref|YP_079742.1| Cell wall hydrolase/autolysin [Bacillus licheniformis ATCC 14580]
gi|52786328|ref|YP_092157.1| YqiI [Bacillus licheniformis ATCC 14580]
gi|52004162|gb|AAU24104.1| Cell wall hydrolase/autolysin [Bacillus licheniformis ATCC 14580]
gi|52348830|gb|AAU41464.1| YqiI [Bacillus licheniformis DSM 13]
Length = 206
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 83/215 (38%), Positives = 103/215 (47%), Gaps = 56/215 (26%)
Query: 24 PLEGQRNRAFTVVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTR 83
PL G+ TV +DAGHGG DSGAVGNGL EKD+NL VA+ + +K + D + +R
Sbjct: 27 PLSGK-----TVYVDAGHGGEDSGAVGNGLLEKDVNLEVAMLIDEKLKEEGAD--TVASR 79
Query: 84 EKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRE 143
D F+TL R A+KN +DLFISIH NS GTETY
Sbjct: 80 TDDTFLTLEDRVAKASKNASDLFISIHANSAVP--EASGTETY----------------- 120
Query: 144 NAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFV-AKGRHDRG 202
+ + Y+ D S +LA IQ+ A G DRG
Sbjct: 121 ---------FDSTYQAAD--------------------SERLASDIQERLPDALGTRDRG 151
Query: 203 VKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGS 237
VK V+ S MPSVLVELGFI+N +A L S
Sbjct: 152 VKESGFYVIKNSQMPSVLVELGFITNKTDADKLES 186
>gi|91227456|ref|ZP_01261820.1| N-acetylmuramoyl-L-alanine amidase [Vibrio alginolyticus 12G01]
gi|91188606|gb|EAS74897.1| N-acetylmuramoyl-L-alanine amidase [Vibrio alginolyticus 12G01]
Length = 569
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 89/281 (31%), Positives = 138/281 (49%), Gaps = 19/281 (6%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVGNGLR--EKDINLAVALRVGRLIKSKHPDVKVLYTREK 85
QR + +VID GHGG D G++G R EKD L+++ ++ + + P +K TR
Sbjct: 160 QRAQEVLIVIDPGHGGEDPGSIGPSRRKYEKDAVLSISRKIAAQLDAT-PGIKTRMTRTG 218
Query: 86 DFFVTLMGRAEYANKNNADLFISIHVN--SQERGHGGYGTETYVMGHERNSKNMA--VVQ 141
D+FV L R A +N+A L ISIH + + + GG +V+ R + +A V
Sbjct: 219 DYFVNLNRRVAIARENDAHLLISIHADAFTSPKPRGG---SVFVLNTRRANTEIARWVEN 275
Query: 142 RENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI--QKGFVAKGRH 199
E L+ + R+ ++ +L + Q + KLA +I + G VA +
Sbjct: 276 HEKQSELLGGSGNAFFTKTKDRNVNQTLL-DLQFSHSQKEGYKLATEILGEMGRVAHLHN 334
Query: 200 DRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDY 259
+ + +LAVL +PSVLVE GFISNP E R L A +D+LA AI + +Y +D
Sbjct: 335 TKPINT-SLAVLRSPQIPSVLVETGFISNPTEERLLFQRAHQDKLAQAITKAVVKYLKD- 392
Query: 260 DRRSGKVSEPAPQA----TEEEDKVEVEPEDNGISSVADMS 296
+ G V P+ + + + + V G+SS A MS
Sbjct: 393 NPPEGTVFSPSAKPMVHIVKRGESLSVIANKYGLSSKALMS 433
>gi|94676650|ref|YP_589013.1| N-acetylmuramoyl-l-alanine amidase II [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
gi|94219800|gb|ABF13959.1| N-acetylmuramoyl-l-alanine amidase II [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
Length = 382
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 71/239 (29%), Positives = 131/239 (54%), Gaps = 11/239 (4%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
+ V IDAGHGG D GA+G +G++EK++ +A+A ++ +++ ++ P K + TR D F+
Sbjct: 149 KTVIVAIDAGHGGPDPGAIGPHGIKEKNVTIAIAHKL-KVMLNRDPMFKPVLTRNGDEFI 207
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQREN---AV 146
++MGR+E A ++ A + +SIH ++ H G V+ ++R + +A + +N A
Sbjct: 208 SVMGRSEVARQHEACVLVSIHADAAPNIHA-RGASVLVLSNKRANSEIANLLEKNDKQAK 266
Query: 147 ILMEKDYRTVYKGFDPRSSESYI--MFELMQNTYQDQSIKLAQQIQKGFVAKGRHDRGVK 204
+L +P S+ + F Q D ++ + + +++ + H + +
Sbjct: 267 LLGGAGNLLASGKTNPYFSQVILDLQFGNAQRVGYDIAVNILKHLREISIL---HKKNPE 323
Query: 205 LGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDRRS 263
+L VL +PS+LVE+GFISN E + LGS A ++++A A+ G Y +YD+ S
Sbjct: 324 HASLGVLRSPDIPSLLVEIGFISNALEEKLLGSCAYQEKIAKALHLGLRSYCMEYDKLS 382
>gi|118070133|ref|ZP_01538368.1| cell wall hydrolase/autolysin [Serratia proteamaculans 568]
gi|118015604|gb|EAV29541.1| cell wall hydrolase/autolysin [Serratia proteamaculans 568]
Length = 417
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 115/236 (48%), Gaps = 22/236 (9%)
Query: 29 RNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDF 87
R+R +++D GHGG D GA+G REKDI L +A R+ LIK + P++KV TR +D
Sbjct: 184 RDRPIVIMLDPGHGGEDPGAIGKFKTREKDIVLQIARRLSTLIK-REPNMKVFMTRNEDV 242
Query: 88 FVTLMGRAEYANKNNADLFISIHVNS----QERGHGGYGTETYVMGHERNSKNMAVVQRE 143
F+ L R A K ADLF+SIH ++ RG + T +K +A Q E
Sbjct: 243 FIPLKVRVAKARKQRADLFVSIHADAFTSRAARGSSVFALSTK-GATSSAAKFLAQTQNE 301
Query: 144 NAVILMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQIQKGFVAKGR-H 199
+ I G +S + Y+ MF+L+Q + S+K +++ R H
Sbjct: 302 SDQI-----------GGVSKSGDRYLDHTMFDLIQTATINDSLKFGKEVLNRMGKINRLH 350
Query: 200 DRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
V AVL +PS+LVE FISN E R L + + ++A +I G Y
Sbjct: 351 KNRVDQAGFAVLKAPDIPSILVETAFISNIEEERKLRTTHFQQQVAESILAGIKAY 406
>gi|84324857|ref|ZP_00972910.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa
2192]
Length = 416
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 90/278 (32%), Positives = 125/278 (44%), Gaps = 21/278 (7%)
Query: 4 KNHTHYLLLWMTAL------LLIVCLPLEGQRNRAFTVVIDAGHGGHDSGAVGN-GLREK 56
K H L L+ AL +L + PL R VV+DAGHGG D GAVG+ G REK
Sbjct: 121 KGHRLVLDLYPQALAAPPEPMLALARPLPST-GRDILVVVDAGHGGKDPGAVGSKGEREK 179
Query: 57 DINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMGRAEYANKNNADLFISIHVNSQER 116
D+ LA+A + R I + K R D FV L R E A + NAD+F+S+H ++ R
Sbjct: 180 DVALAIARLLARRI-DREKGFKARLVRNGDVFVPLRKRPEVARRYNADMFVSVHADAAPR 238
Query: 117 GHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELM 174
G Y + S MA + +REN L+ +G D + ++ ++
Sbjct: 239 LTAS-GASVYALSEHGASSTMARWMAERENGADLIGNSGNLPLQGRD--KVLAGVILDMA 295
Query: 175 QNTYQDQSIKLAQQIQKGFV-AKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEAR 233
++ S+ L + H + V+ AVL +PS+LVE GFISN + R
Sbjct: 296 LSSTIASSLDLGHSVLGQLSDVTALHQKRVEQAGFAVLKSPDIPSILVETGFISNRGDCR 355
Query: 234 YLGSEAGRDELASAIARGFARY------KEDYDRRSGK 265
L E R L AI G Y Y RRS +
Sbjct: 356 RLMDERHRQRLPEAIFAGVQGYFRQRPPASSYWRRSAR 393
>gi|54295539|ref|YP_127954.1| hypothetical protein lpl2626 [Legionella pneumophila str. Lens]
gi|53755371|emb|CAH16867.1| hypothetical protein [Legionella pneumophila str. Lens]
Length = 476
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 92/328 (28%), Positives = 142/328 (43%), Gaps = 53/328 (16%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R VV+DAGHGG D GA G EKD+ LA+ L++ RLI + P ++ + TR D++V
Sbjct: 186 RDVVVVLDAGHGGKDPGARGPRRSNEKDVVLAITLKLKRLI-DRQPGMRAVLTRSGDYYV 244
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQREN--- 144
L R + A K N D+FISIH ++ H G + + + A + ++EN
Sbjct: 245 GLRQRLDIARKYNGDVFISIHADAFNNPHSN-GASVFALSQRGATSEAARWLAEKENYSE 303
Query: 145 --AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA-KGRHDR 201
V L E D D ++ +L Q + +++ ++ H+
Sbjct: 304 LGGVNLGELD--------DSNGVVRSVLIDLSQTATINAGLEMGGKVLGQLDNFTNLHNN 355
Query: 202 GVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDR 261
V+ VL +PS+LVE GFISNP E R L + A ++ L+ AI +G Y D+
Sbjct: 356 KVEQARFVVLKSPDIPSILVETGFISNPREERNLTNPAYQERLSQAIFQGLKNYFWDH-- 413
Query: 262 RSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKT 321
P T E I+P H VK E +
Sbjct: 414 --------PPHGTRIE----------------------AMISPNFHIVKKGETLPAIAAR 443
Query: 322 YKIQI--LSSTTKLKNGDKRLKGYKVVI 347
Y++ + L S +L+ + + G K+VI
Sbjct: 444 YRVSVNALQSINRLQARARLMPGQKLVI 471
>gi|134296748|ref|YP_001120483.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia vietnamiensis G4]
gi|134139905|gb|ABO55648.1| N-acetylmuramoyl-L-alanine amidase [Burkholderia vietnamiensis G4]
Length = 505
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 119/238 (50%), Gaps = 19/238 (7%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYTRE 84
+G R TV ID GHGG D GA+G G EK + L +A ++ I P+++ + TR+
Sbjct: 266 KGGTMRLLTVAIDPGHGGEDPGAIGGAGTYEKHVALDIAKKLRAKIDGA-PNMRAMMTRD 324
Query: 85 KDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQR 142
DFFV L R + A + ADLF+SIH ++ G+ + + S A + +
Sbjct: 325 ADFFVPLNVRVQKARRVGADLFVSIHADAFTTPSAS-GSSVFALSDHGASSAAARWLANK 383
Query: 143 ENAVILMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQIQK--GFVAKG 197
ENA L+ G + ++ ++ + +F++ S++ + K G + K
Sbjct: 384 ENASDLI--------GGINIKTQDAAVSRALFDMSTTAQIRDSLRYGNYVLKEVGGINK- 434
Query: 198 RHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H V+ AVL +PS+LVE FISNP E R L ++ R+E+A AI RG RY
Sbjct: 435 LHKGSVEQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDSYREEMADAIFRGIKRY 492
>gi|149192038|ref|ZP_01870265.1| N-acetylmuramoyl-L-alanine amidase [Vibrio shilonii AK1]
gi|148834139|gb|EDL51149.1| N-acetylmuramoyl-L-alanine amidase [Vibrio shilonii AK1]
Length = 563
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Query: 35 VVIDAGHGGHDSGAVGNGLR-EKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFVTLMG 93
V IDAGHGG D G++G + EK + L+V+ ++ I + P +K + TR D+FV L
Sbjct: 161 VAIDAGHGGEDPGSIGPTKKYEKHVTLSVSKKLAAQIDAI-PGMKAVLTRRGDYFVNLNK 219
Query: 94 RAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVILMEK 151
R+E A KN A L +SIH ++ R G +V+ R + +A V E L+
Sbjct: 220 RSEIARKNKAHLLVSIHADAF-RTPQPRGASVFVLNTRRANTEIARWVENHEQQSELLGG 278
Query: 152 DYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQK--GFVAKGRHDRGVKLGNLA 209
+ K + R+ S + +L + Q + K+A +I K G VA H + +LA
Sbjct: 279 AGEVLSKNTNDRNV-SQTLLDLQFSHSQKEGYKVATKILKEMGKVAH-LHKKEPVNASLA 336
Query: 210 VLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKE 257
VL +PSVLVE GFISNP E R L + + +D+LA A+A+ +Y E
Sbjct: 337 VLKSPDIPSVLVETGFISNPTEERLLTTRSHQDKLARALAKAIVQYFE 384
>gi|89094653|ref|ZP_01167590.1| N-acetylmuramoyl-L-alanine amidase [Oceanospirillum sp. MED92]
gi|89081123|gb|EAR60358.1| N-acetylmuramoyl-L-alanine amidase [Oceanospirillum sp. MED92]
Length = 442
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R + IDAGHGG D GA+G G+REKD+ +A + R + + P K TR D+++
Sbjct: 152 RDIVIAIDAGHGGEDPGAIGPGGVREKDVVFKIAKELKRKLDAT-PGYKGQLTRTGDYYI 210
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVI 147
+L GR + A K NADLF+SIH ++ + G +V+ S M + ++EN+
Sbjct: 211 SLRGRTKAARKQNADLFVSIHADAF-KDKRARGASVWVLSSRGASSEMGRWLARKENSAD 269
Query: 148 LMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR-HDRGVKLG 206
L+ + D + ++ ++ + S +A+QI + H V+
Sbjct: 270 LIGGVGSVSLE--DKDDVLASVLLDMSMTASRGDSRSVAKQIHNNINRFAKMHKPHVEQA 327
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
AVL +PS+LVE GFISNP EA L + A + ++A+A+ +G ++
Sbjct: 328 GFAVLKSPDIPSILVETGFISNPGEAAKLKTSAYQKKMANAVYQGITQH 376
>gi|75907688|ref|YP_321984.1| Cell wall hydrolase/autolysin [Anabaena variabilis ATCC 29413]
gi|75701413|gb|ABA21089.1| Cell wall hydrolase/autolysin [Anabaena variabilis ATCC 29413]
Length = 627
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 103/236 (43%), Gaps = 57/236 (24%)
Query: 23 LPLEGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLY 81
+P R R VVID GHGG DSGA G GL EKD+ L + LRV +++ V+ +
Sbjct: 442 IPRSVPRGR-LLVVIDPGHGGKDSGAPGLGGLLEKDVVLPIGLRVAAILEQN--GVQAVL 498
Query: 82 TREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQ 141
TR DFFV L GR + A + NA LF+SIH NS + G E Y
Sbjct: 499 TRNSDFFVELQGRVDIAERANATLFVSIHANSVDGRPDVNGLEVY--------------- 543
Query: 142 RENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAK--GRH 199
Y D LA+ ++K +
Sbjct: 544 ------------------------------------YYDSGYALAETVRKTILQSIGTLK 567
Query: 200 DRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
DRG + VL S+MPS+LVE G++S + LGS ++ +A AIARG +Y
Sbjct: 568 DRGTRKARFYVLRKSSMPSILVETGYMSGREDNPRLGSPEYQNRMADAIARGILQY 623
>gi|52143606|ref|YP_083222.1| S-layer protein and N-acetylmuramoyl-L-alanine amidase fusion
protein [Bacillus cereus E33L]
gi|51977075|gb|AAU18625.1| S-layer protein and N-acetylmuramoyl-L-alanine amidase fusion
protein [Bacillus cereus E33L]
Length = 413
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 108/231 (46%), Gaps = 50/231 (21%)
Query: 35 VVIDAGHGGHDSGAVGNGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV----- 89
++ID GHGG D G GL E DI L + R+ LI+ + P +V+ TRE D +
Sbjct: 212 IIIDPGHGGTDPGKATQGLHESDIVLDTSKRLQSLIEKQTP-FRVMLTRETDIRLDEKQG 270
Query: 90 -TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTET-YVMGHERNSKNMAVVQRENAVI 147
L R ++A ++N D+F+SIH N+ ++ H GYGTET Y G E+
Sbjct: 271 EDLKKRVDFAKEHNGDIFVSIHANASQK-HDGYGTETFYYKGSEK--------------- 314
Query: 148 LMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFV-AKGRHDRGVKLG 206
K R +SY+ LA +IQK V A DRGVK
Sbjct: 315 ----------KELTEREKDSYM---------------LANKIQKRLVKALDTRDRGVKPE 349
Query: 207 NLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKE 257
+ VL + MP+VL EL F+ N + L SE+GR A AI G Y E
Sbjct: 350 DFYVLRENEMPAVLTELAFLDNSTDYEKLASESGRQIAAEAIYEGILDYYE 400
>gi|116053096|ref|YP_793415.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115588317|gb|ABJ14332.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 475
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 89/311 (28%), Positives = 135/311 (43%), Gaps = 40/311 (12%)
Query: 23 LPLEGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLY 81
LP +G R + IDAGHGG D GA+G GL EK+I L++A + R I +
Sbjct: 168 LPTKGG-TRDIVIAIDAGHGGEDPGALGPGGLHEKNITLSIARELQRQINQVR-GYRAEL 225
Query: 82 TREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--V 139
TR D+F+ L R E A K ADLF+SIH ++ +G + + + A +
Sbjct: 226 TRTGDYFIPLRKRTEIARKKGADLFVSIHADAAP-SRSAFGASVFALSDRGATSETARWL 284
Query: 140 VQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR- 198
EN L+ D +V G D + ++ +L S+ + ++ GR
Sbjct: 285 ADSENRSDLIGGD-GSVSLG-DKDQMLAGVLLDLSMTATLSSSLDVGHKV---LTNVGRI 339
Query: 199 ---HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H R V+ VL +PS+LVE GFISN E+R L S + + LA +I G +Y
Sbjct: 340 TSLHKRRVEQAGFMVLKSPDIPSILVETGFISNVNESRKLASASHQQALARSITSGIRQY 399
Query: 256 KEDYDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGA 315
+ P P G + + GK S+ P+ H V+P E
Sbjct: 400 FQ---------QSPPP----------------GTYIASLRAQGKLSMGPREHVVRPGETL 434
Query: 316 HSAKKTYKIQI 326
+ Y++ +
Sbjct: 435 AMIAQRYEVSM 445
>gi|152989096|ref|YP_001350995.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa PA7]
gi|150964254|gb|ABR86279.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa PA7]
Length = 487
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 89/311 (28%), Positives = 135/311 (43%), Gaps = 40/311 (12%)
Query: 23 LPLEGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLY 81
LP +G R + IDAGHGG D GA+G GL EK+I L++A + R I +
Sbjct: 180 LPTKGG-TRDIVIAIDAGHGGEDPGALGPGGLHEKNITLSIARELQRQINQVR-GYRAEL 237
Query: 82 TREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--V 139
TR D+F+ L R E A K ADLF+SIH ++ +G + + + A +
Sbjct: 238 TRTGDYFIPLRKRTEIARKKGADLFVSIHADAAP-SRSAFGASVFALSDRGATSETARWL 296
Query: 140 VQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR- 198
EN L+ D +V G D + ++ +L S+ + ++ GR
Sbjct: 297 ADSENRSDLIGGD-GSVSLG-DKDQMLAGVLLDLSMTATLSSSLDVGHKV---LTNVGRI 351
Query: 199 ---HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H R V+ VL +PS+LVE GFISN E+R L S + + LA +I G +Y
Sbjct: 352 TSLHKRRVEQAGFMVLKSPDIPSILVETGFISNVNESRKLASASHQQALARSITSGIRQY 411
Query: 256 KEDYDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGA 315
+ P P G + + GK S+ P+ H V+P E
Sbjct: 412 FQ---------QSPPP----------------GTYIASLRAQGKLSMGPREHVVRPGETL 446
Query: 316 HSAKKTYKIQI 326
+ Y++ +
Sbjct: 447 AMIAQRYEVSM 457
>gi|119474826|ref|ZP_01615179.1| N-acetylmuramoyl-L-alanine amidase [marine gamma proteobacterium
HTCC2143]
gi|119451029|gb|EAW32262.1| N-acetylmuramoyl-L-alanine amidase [marine gamma proteobacterium
HTCC2143]
Length = 444
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 82/238 (34%), Positives = 118/238 (49%), Gaps = 23/238 (9%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVGNG-LREKDINLAVALRVGRLIKSKHPDVKVLYTREKD 86
+ R V IDAGHGG D GA G G LREK + LA+A + L+K + V+ R D
Sbjct: 152 KNRRDIVVAIDAGHGGEDPGASGPGNLREKKVVLAIAKELNYLLKQQKGYQPVM-IRNGD 210
Query: 87 FFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMAVVQRENA- 145
+FV L R A K ADL +SIH ++ + +G+ Y + + S MA V E+A
Sbjct: 211 YFVGLQKRRGLARKAQADLMVSIHADAFKNSQA-HGSSVYALSRKGASSAMAGVLAEDAN 269
Query: 146 -------VILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR 198
V L +KD V G ++ +L D SI++ + R
Sbjct: 270 NSDLVGGVSLGDKD--DVLAG---------VLADLSMAASLDASIQIGTGVVSEMGKISR 318
Query: 199 -HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H R V+ N +VL +PS+LVE GFISNP EA+ L +++ + ++A AI G R+
Sbjct: 319 LHSRKVEQANFSVLRSPDVPSILVETGFISNPGEAKKLSTKSYQRKMARAIYNGITRH 376
>gi|15600140|ref|NP_253634.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa PAO1]
gi|9951227|gb|AAG08332.1|AE004907_10 N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa PAO1]
gi|126170269|gb|EAZ55780.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa C3719]
gi|126197542|gb|EAZ61605.1| N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa 2192]
Length = 475
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 89/311 (28%), Positives = 135/311 (43%), Gaps = 40/311 (12%)
Query: 23 LPLEGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLY 81
LP +G R + IDAGHGG D GA+G GL EK+I L++A + R I +
Sbjct: 168 LPTKGG-TRDIVIAIDAGHGGEDPGALGPGGLHEKNITLSIARELQRQINQVR-GYRAEL 225
Query: 82 TREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--V 139
TR D+F+ L R E A K ADLF+SIH ++ +G + + + A +
Sbjct: 226 TRTGDYFIPLRKRTEIARKKGADLFVSIHADAAP-SRSAFGASVFALSDRGATSETARWL 284
Query: 140 VQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR- 198
EN L+ D +V G D + ++ +L S+ + ++ GR
Sbjct: 285 ADSENRSDLIGGD-GSVSLG-DKDQMLAGVLLDLSMTATLSSSLDVGHKV---LTNVGRI 339
Query: 199 ---HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H R V+ VL +PS+LVE GFISN E+R L S + + LA +I G +Y
Sbjct: 340 TSLHKRRVEQAGFMVLKSPDIPSILVETGFISNVNESRKLASASHQQALARSITSGIRQY 399
Query: 256 KEDYDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGA 315
+ P P G + + GK S+ P+ H V+P E
Sbjct: 400 FQ---------QSPPP----------------GTYIASLRAQGKLSMGPREHVVRPGETL 434
Query: 316 HSAKKTYKIQI 326
+ Y++ +
Sbjct: 435 AMIAQRYEVSM 445
>gi|151937418|gb|EDN56278.1| N-acetylmuramoyl-L-alanine amidase domain protein [Vibrio sp. Ex25]
Length = 571
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 93/290 (32%), Positives = 137/290 (47%), Gaps = 37/290 (12%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVGNGLR--EKDINLAVALRVGRLIKSKHPDVKVLYTREK 85
QR + +VID GHGG D G++G R EKD L+++ ++ + + P +K TR
Sbjct: 162 QRAQEVLIVIDPGHGGEDPGSIGPSRRKYEKDAVLSISRKIAAQLDAT-PGIKTRMTRTG 220
Query: 86 DFFVTLMGRAEYANKNNADLFISIHVNS----QERGHGGYGTET---------YVMGHER 132
D+FV L R A +N+A L ISIH ++ + RG + T +V HE+
Sbjct: 221 DYFVNLNRRVAIARENDAHLLISIHADAFTSPKPRGGSVFVLNTRRANTEIARWVENHEK 280
Query: 133 NSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI--Q 190
S+ + NA KD D + S S Q + KLA +I +
Sbjct: 281 QSEILG--GSGNAFFTKTKDRNVNQTLLDLQFSHS-----------QKEGYKLATEILGE 327
Query: 191 KGFVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIAR 250
G VA + + + +LAVL +PSVLVE GFISNP E R L A +D+LA AI +
Sbjct: 328 MGRVAHLHNTKPINT-SLAVLRSPQIPSVLVETGFISNPTEERLLFQRAHQDKLAQAITK 386
Query: 251 GFARYKEDYDRRSGKVSEPAPQ----ATEEEDKVEVEPEDNGISSVADMS 296
+Y +D + G V P+ + + + + V G+SS A MS
Sbjct: 387 AVVKYLKD-NPPEGTVFSPSAKPIVHTVKRGESLSVIANKYGLSSKALMS 435
>gi|118039643|ref|ZP_01511042.1| cell wall hydrolase/autolysin [Burkholderia phytofirmans PsJN]
gi|117989856|gb|EAV04155.1| cell wall hydrolase/autolysin [Burkholderia phytofirmans PsJN]
Length = 526
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 31/247 (12%)
Query: 24 PLEGQRN--RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVL 80
P G+ N R TV ID GHGG D GA+G +G EK + L +A ++ I ++ P+++ +
Sbjct: 283 PKSGKSNTVRLLTVAIDPGHGGEDPGAIGGSGTYEKHVALDIAKKLRAKIDAQ-PNMRAM 341
Query: 81 YTREKDFFVTLMGRAEYANKNNADLFISIHVNS----QERG--------HGGYGTETYVM 128
TR+ DFFV L R + A + ADLF+SIH ++ +G HG M
Sbjct: 342 MTRDADFFVPLNVRVQKARRVGADLFVSIHADAFTTPDAKGSSVFALSEHGATSAAARWM 401
Query: 129 GHERNSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQ 188
++ NS + E I ++ TV + S+ + I + + + I +
Sbjct: 402 ANKENSSD------EIGGINIKSADATVNRALFDMSTTAQIRDSMRYGNFVLKEIGGINK 455
Query: 189 IQKGFVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAI 248
+ KG V+ AVL +PS+LVE FISNP E R L +A R+++A AI
Sbjct: 456 LHKG---------SVEQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDAYREKMADAI 506
Query: 249 ARGFARY 255
G RY
Sbjct: 507 MTGIKRY 513
>gi|74313385|ref|YP_311804.1| putative amidase [Shigella sonnei Ss046]
gi|82545118|ref|YP_409065.1| putative amidase [Shigella boydii Sb227]
gi|882709|gb|AAB40464.1| ORF_f447
gi|13363146|dbj|BAB37097.1| putative amidase [Escherichia coli O157:H7 str. Sakai]
gi|73856862|gb|AAZ89569.1| putative amidase [Shigella sonnei Ss046]
gi|81246529|gb|ABB67237.1| putative amidase [Shigella boydii Sb227]
Length = 447
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 123/243 (50%), Gaps = 20/243 (8%)
Query: 24 PLEGQRNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYT 82
P + R+R +++D GHGG DSGAVG REKD+ L +A R+ LI+ K ++KV T
Sbjct: 209 PGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIE-KEGNMKVYMT 267
Query: 83 REKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VV 140
R +D F+ L R A K ADLF+SIH ++ G+ + + + + A +
Sbjct: 268 RNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPS-GSSVFALSTKGATSTAAKYLA 326
Query: 141 QRENAVILMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQI--QKGFVA 195
Q +NA L+ G +S + Y+ MF+++Q+ S+K + + + G +
Sbjct: 327 QTQNASDLI---------GGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGKIN 377
Query: 196 KGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
K H V+ AVL +PS+LVE FISN E R L + + E+A +I G Y
Sbjct: 378 K-LHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAY 436
Query: 256 KED 258
D
Sbjct: 437 FAD 439
>gi|26249246|ref|NP_755286.1| N-acetylmuramoyl-L-alanine amidase amiC precursor [Escherichia coli
CFT073]
gi|91212212|ref|YP_542198.1| N-acetylmuramoyl-L-alanine amidase AmiC precursor [Escherichia coli
UTI89]
gi|117625070|ref|YP_854058.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli APEC O1]
gi|26109653|gb|AAN81856.1|AE016765_258 N-acetylmuramoyl-L-alanine amidase amiC precursor [Escherichia coli
CFT073]
gi|91073786|gb|ABE08667.1| N-acetylmuramoyl-L-alanine amidase AmiC precursor [Escherichia coli
UTI89]
gi|115514194|gb|ABJ02269.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli APEC O1]
Length = 447
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 123/243 (50%), Gaps = 20/243 (8%)
Query: 24 PLEGQRNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYT 82
P + R+R +++D GHGG DSGAVG REKD+ L +A R+ LI+ K ++KV T
Sbjct: 209 PGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIE-KEGNMKVYMT 267
Query: 83 REKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VV 140
R +D F+ L R A K ADLF+SIH ++ G+ + + + + A +
Sbjct: 268 RNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPS-GSSVFALSTKGATSTAAKYLA 326
Query: 141 QRENAVILMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQI--QKGFVA 195
Q +NA L+ G +S + Y+ MF+++Q+ S+K + + + G +
Sbjct: 327 QTQNASDLI---------GGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGKIN 377
Query: 196 KGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
K H V+ AVL +PS+LVE FISN E R L + + E+A +I G Y
Sbjct: 378 K-LHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAY 436
Query: 256 KED 258
D
Sbjct: 437 FAD 439
>gi|82778193|ref|YP_404542.1| putative amidase [Shigella dysenteriae Sd197]
gi|81242341|gb|ABB63051.1| putative amidase [Shigella dysenteriae Sd197]
Length = 447
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 123/243 (50%), Gaps = 20/243 (8%)
Query: 24 PLEGQRNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYT 82
P + R+R +++D GHGG DSGAVG REKD+ L +A R+ LI+ K ++KV T
Sbjct: 209 PGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIE-KEGNMKVYMT 267
Query: 83 REKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VV 140
R +D F+ L R A K ADLF+SIH ++ G+ + + + + A +
Sbjct: 268 RNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPS-GSSVFALSTKGATSTAAKYLA 326
Query: 141 QRENAVILMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQI--QKGFVA 195
Q +NA L+ G +S + Y+ MF+++Q+ S+K + + + G +
Sbjct: 327 QTQNASDLI---------GGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGKIN 377
Query: 196 KGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
K H V+ AVL +PS+LVE FISN E R L + + E+A +I G Y
Sbjct: 378 K-LHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAY 436
Query: 256 KED 258
D
Sbjct: 437 FAD 439
>gi|38704120|ref|NP_311701.2| putative amidase [Escherichia coli O157:H7 str. Sakai]
gi|75175499|ref|ZP_00695717.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Shigella boydii BS512]
gi|75187553|ref|ZP_00700820.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
E24377A]
gi|75196785|ref|ZP_00706855.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli HS]
gi|75212550|ref|ZP_00712574.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli B171]
gi|75215041|ref|ZP_00713501.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
E110019]
gi|75228193|ref|ZP_00714855.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli B7A]
gi|75241774|ref|ZP_00725593.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli F11]
gi|75256831|ref|ZP_00728425.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli E22]
gi|75511957|ref|ZP_00734560.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
53638]
gi|83569189|ref|ZP_00920647.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Shigella dysenteriae
1012]
gi|83584774|ref|ZP_00923436.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Escherichia coli
101-1]
gi|89109600|ref|AP_003380.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli W3110]
gi|90111492|ref|NP_417294.4| N-acetylmuramoyl-L-alanine amidase [Escherichia coli K12]
gi|110642984|ref|YP_670714.1| putative amidase [Escherichia coli 536]
gi|124528778|ref|ZP_01700002.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli B]
gi|54036722|sp|P63884|AMIC_ECOL6 N-acetylmuramoyl-L-alanine amidase amiC precursor
gi|54040695|sp|P63883|AMIC_ECOLI N-acetylmuramoyl-L-alanine amidase amiC precursor
gi|85675633|dbj|BAE76886.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli W3110]
gi|87082163|gb|AAC75856.2| N-acetylmuramoyl-L-alanine amidase [Escherichia coli K12]
gi|110344576|gb|ABG70813.1| putative amidase [Escherichia coli 536]
gi|124500306|gb|EAY47781.1| N-acetylmuramoyl-L-alanine amidase [Escherichia coli B]
gi|157067949|gb|ABV07204.1| N-acetylmuramoyl-L-alanine amidase AmiC [Escherichia coli HS]
gi|157079833|gb|ABV19541.1| N-acetylmuramoyl-L-alanine amidase AmiC [Escherichia coli E24377A]
Length = 417
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 123/243 (50%), Gaps = 20/243 (8%)
Query: 24 PLEGQRNRAFTVVIDAGHGGHDSGAVGN-GLREKDINLAVALRVGRLIKSKHPDVKVLYT 82
P + R+R +++D GHGG DSGAVG REKD+ L +A R+ LI+ K ++KV T
Sbjct: 179 PGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIE-KEGNMKVYMT 237
Query: 83 REKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VV 140
R +D F+ L R A K ADLF+SIH ++ G+ + + + + A +
Sbjct: 238 RNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPS-GSSVFALSTKGATSTAAKYLA 296
Query: 141 QRENAVILMEKDYRTVYKGFDPRSSESYI---MFELMQNTYQDQSIKLAQQI--QKGFVA 195
Q +NA L+ G +S + Y+ MF+++Q+ S+K + + + G +
Sbjct: 297 QTQNASDLI---------GGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGKIN 347
Query: 196 KGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
K H V+ AVL +PS+LVE FISN E R L + + E+A +I G Y
Sbjct: 348 K-LHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAY 406
Query: 256 KED 258
D
Sbjct: 407 FAD 409
>gi|67155918|ref|ZP_00417545.1| N-acetylmuramoyl-L-alanine amidase [Azotobacter vinelandii AvOP]
gi|67086862|gb|EAM06330.1| N-acetylmuramoyl-L-alanine amidase [Azotobacter vinelandii AvOP]
Length = 408
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 115/237 (48%), Gaps = 16/237 (6%)
Query: 26 EGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSK---HPDVKVLY 81
+GQRN VVIDAGHGG D GAVG G +EK AVAL + RL+ K K
Sbjct: 161 DGQRN--IVVVIDAGHGGKDPGAVGPKGEQEK----AVALAIARLLAKKVDGRSGFKARL 214
Query: 82 TREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--V 139
R +D F+ L R E A + NAD+FISIH ++ R G + + + MA +
Sbjct: 215 VRNEDVFIPLRKRVEVARRYNADMFISIHADAAPR-RTASGASVFALSQGGATSTMARWL 273
Query: 140 VQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA-KGR 198
+REN V L+ K DP + ++ ++ S+ L + I G
Sbjct: 274 AERENRVDLLGAQRSLSLKDRDPMLAG--VILDMSMTATITTSLDLGKNILDSLQGVAGA 331
Query: 199 HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H + V+ AVL +PSVLVE GF+SN + R L + ++A+AI G ++
Sbjct: 332 HQKRVEQAGFAVLKSPDIPSVLVETGFMSNTVDCRKLVDPRHQRKVANAIFDGLFQH 388
>gi|54298689|ref|YP_125058.1| hypothetical protein lpp2753 [Legionella pneumophila str. Paris]
gi|53752474|emb|CAH13906.1| hypothetical protein [Legionella pneumophila str. Paris]
Length = 476
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 91/328 (27%), Positives = 142/328 (43%), Gaps = 53/328 (16%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R VV+DAGHGG D GA G EKD+ LA+ L++ RLI + P ++ + TR D++V
Sbjct: 186 RDVVVVLDAGHGGKDPGARGPRRSNEKDVVLAITLKLKRLI-DRQPGMRAVLTRSGDYYV 244
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQREN--- 144
L R + A K N D+FISIH ++ H G + + + A + ++EN
Sbjct: 245 GLRQRLDIARKYNGDVFISIHADAFNNPHSN-GASVFALSQRGATSEAARWLAEKENYSE 303
Query: 145 --AVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVA-KGRHDR 201
V L E D D ++ +L Q + +++ ++ H+
Sbjct: 304 LGGVNLGELD--------DSNGVVRSVLIDLSQTATINAGLEMGGKVLGQLDNFTNLHNN 355
Query: 202 GVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARYKEDYDR 261
V+ VL +PS+LVE GFISNP E R L + A ++ L+ AI +G Y D+
Sbjct: 356 KVEQARFVVLKSPDIPSILVETGFISNPREERNLTNPAYQERLSQAIFQGLKNYFWDH-- 413
Query: 262 RSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGAHSAKKT 321
P T E ++P H VK E +
Sbjct: 414 --------PPHGTRIE----------------------AMLSPNFHIVKKGETLPAIAAR 443
Query: 322 YKIQI--LSSTTKLKNGDKRLKGYKVVI 347
Y++ + L S +L+ + + G K+VI
Sbjct: 444 YRVSVSALQSINRLQARARLMPGQKLVI 471
>gi|107104046|ref|ZP_01367964.1| hypothetical protein PaerPA_01005119 [Pseudomonas aeruginosa PACS2]
Length = 461
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 89/311 (28%), Positives = 135/311 (43%), Gaps = 40/311 (12%)
Query: 23 LPLEGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLY 81
LP +G R + IDAGHGG D GA+G GL EK+I L++A + R I +
Sbjct: 154 LPTKGG-TRDIVIAIDAGHGGEDPGALGPGGLHEKNITLSIARELQRQINQVR-GYRAEL 211
Query: 82 TREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--V 139
TR D+F+ L R E A K ADLF+SIH ++ +G + + + A +
Sbjct: 212 TRTGDYFIPLRKRTEIARKKGADLFVSIHADAAP-SRSAFGASVFALSDRGATSETARWL 270
Query: 140 VQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR- 198
EN L+ D +V G D + ++ +L S+ + ++ GR
Sbjct: 271 ADSENRSDLIGGD-GSVSLG-DKDQMLAGVLLDLSMTATLSSSLDVGHKV---LTNVGRI 325
Query: 199 ---HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H R V+ VL +PS+LVE GFISN E+R L S + + LA +I G +Y
Sbjct: 326 TSLHKRRVEQAGFMVLKSPDIPSILVETGFISNVNESRKLASASHQQALARSITSGIRQY 385
Query: 256 KEDYDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGA 315
+ P P G + + GK S+ P+ H V+P E
Sbjct: 386 FQ---------QSPPP----------------GTYIASLRAQGKLSMGPREHVVRPGETL 420
Query: 316 HSAKKTYKIQI 326
+ Y++ +
Sbjct: 421 AMIAQRYEVSM 431
>gi|116184700|ref|ZP_01474628.1| hypothetical protein VEx2w_02002759 [Vibrio sp. Ex25]
Length = 562
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 93/290 (32%), Positives = 137/290 (47%), Gaps = 37/290 (12%)
Query: 28 QRNRAFTVVIDAGHGGHDSGAVGNGLR--EKDINLAVALRVGRLIKSKHPDVKVLYTREK 85
QR + +VID GHGG D G++G R EKD L+++ ++ + + P +K TR
Sbjct: 153 QRAQEVLIVIDPGHGGEDPGSIGPSRRKYEKDAVLSISRKIAAQLDAT-PGIKTRMTRTG 211
Query: 86 DFFVTLMGRAEYANKNNADLFISIHVNS----QERGHGGYGTET---------YVMGHER 132
D+FV L R A +N+A L ISIH ++ + RG + T +V HE+
Sbjct: 212 DYFVNLNRRVAIARENDAHLLISIHADAFTSPKPRGGSVFVLNTRRANTEIARWVENHEK 271
Query: 133 NSKNMAVVQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI--Q 190
S+ + NA KD D + S S Q + KLA +I +
Sbjct: 272 QSEILG--GSGNAFFTKTKDRNVNQTLLDLQFSHS-----------QKEGYKLATEILGE 318
Query: 191 KGFVAKGRHDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIAR 250
G VA + + + +LAVL +PSVLVE GFISNP E R L A +D+LA AI +
Sbjct: 319 MGRVAHLHNTKPINT-SLAVLRSPQIPSVLVETGFISNPTEERLLFQRAHQDKLAQAITK 377
Query: 251 GFARYKEDYDRRSGKVSEPAPQ----ATEEEDKVEVEPEDNGISSVADMS 296
+Y +D + G V P+ + + + + V G+SS A MS
Sbjct: 378 AVVKYLKD-NPPEGTVFSPSAKPIVHTVKRGESLSVIANKYGLSSKALMS 426
>gi|120555683|ref|YP_960034.1| N-acetylmuramoyl-L-alanine amidase [Marinobacter aquaeolei VT8]
gi|120325532|gb|ABM19847.1| N-acetylmuramoyl-L-alanine amidase [Marinobacter aquaeolei VT8]
Length = 443
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 81/230 (35%), Positives = 115/230 (50%), Gaps = 10/230 (4%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R VVIDAGHGG D GA+G G REKD+ L +A R+ LI + L TR D++V
Sbjct: 148 RDIIVVIDAGHGGEDPGAIGPRGTREKDVVLRMAKRLADLINQQKGFTAKL-TRTGDYYV 206
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVI 147
L R A K NADLF+S+H ++ R G + + + A + Q EN
Sbjct: 207 GLRNRTLLARKYNADLFVSVHADAF-RTPQPRGASVFALSQRGATSETARWLAQSENRSD 265
Query: 148 LMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI--QKGFVAKGRHDRGVKL 205
L+ G D + ++ +L + S+ + + + G V K H +GV+
Sbjct: 266 LIGGAGGVSLDGRDDMLAG--VLLDLSMTASINASLGVGDSVLGRLGRVVK-LHKQGVEQ 322
Query: 206 GNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
VL +PS+LVE GFISNP E + L SE R++LA+AI G +Y
Sbjct: 323 AAFVVLKSPDIPSILVEAGFISNPTEEKNLASEWYRNKLANAIFDGIEQY 372
>gi|84317611|ref|ZP_00966050.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa
C3719]
gi|84323710|ref|ZP_00971778.1| COG0860: N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa
2192]
Length = 461
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 89/311 (28%), Positives = 135/311 (43%), Gaps = 40/311 (12%)
Query: 23 LPLEGQRNRAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLY 81
LP +G R + IDAGHGG D GA+G GL EK+I L++A + R I +
Sbjct: 154 LPTKGG-TRDIVIAIDAGHGGEDPGALGPGGLHEKNITLSIARELQRQINQVR-GYRAEL 211
Query: 82 TREKDFFVTLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--V 139
TR D+F+ L R E A K ADLF+SIH ++ +G + + + A +
Sbjct: 212 TRTGDYFIPLRKRTEIARKKGADLFVSIHADAAP-SRSAFGASVFALSDRGATSETARWL 270
Query: 140 VQRENAVILMEKDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQIQKGFVAKGR- 198
EN L+ D +V G D + ++ +L S+ + ++ GR
Sbjct: 271 ADSENRSDLIGGD-GSVSLG-DKDQMLAGVLLDLSMTATLSSSLDVGHKV---LTNVGRI 325
Query: 199 ---HDRGVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARGFARY 255
H R V+ VL +PS+LVE GFISN E+R L S + + LA +I G +Y
Sbjct: 326 TSLHKRRVEQAGFMVLKSPDIPSILVETGFISNVNESRKLASASHQQALARSITSGIRQY 385
Query: 256 KEDYDRRSGKVSEPAPQATEEEDKVEVEPEDNGISSVADMSDGKESIAPKGHAVKPDEGA 315
+ P P G + + GK S+ P+ H V+P E
Sbjct: 386 FQ---------QSPPP----------------GTYIASLRAQGKLSMGPREHVVRPGETL 420
Query: 316 HSAKKTYKIQI 326
+ Y++ +
Sbjct: 421 AMIAQRYEVSM 431
>gi|119502789|ref|ZP_01624874.1| N-acetylmuramoyl-L-alanine amidase [marine gamma proteobacterium
HTCC2080]
gi|119461135|gb|EAW42225.1| N-acetylmuramoyl-L-alanine amidase [marine gamma proteobacterium
HTCC2080]
Length = 449
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 119/230 (51%), Gaps = 21/230 (9%)
Query: 31 RAFTVVIDAGHGGHDSGAVG-NGLREKDINLAVALRVGRLIKSKHPDVKVLYTREKDFFV 89
R V IDAGHGG D GA+G L EK + LA+A ++ +++ P +K + R+ D++V
Sbjct: 159 RDIIVAIDAGHGGEDPGALGPKKLYEKKVVLAIAKKLSAQLEAT-PGLKPVMVRDGDYYV 217
Query: 90 TLMGRAEYANKNNADLFISIHVNSQERGHGGYGTETYVMGHERNSKNMA--VVQRENAVI 147
+L GR + A K+ ADLF+SIH ++ + G Y + + S A + REN+
Sbjct: 218 SLRGRRDLARKSQADLFVSIHADAFSQASAS-GASVYALSTKGASSTAAKYLADRENSAD 276
Query: 148 LME----KDYRTVYKGFDPRSSESYIMFELMQNTYQDQSIKLAQQI--QKGFVAKGRHDR 201
L+ D + G ++ +L D S+ L ++ + G AK H
Sbjct: 277 LVGGVRLSDKDDILAG---------VLTDLSMTATLDTSLSLGARVLAEIGDFAK-LHKP 326
Query: 202 GVKLGNLAVLVFSAMPSVLVELGFISNPAEARYLGSEAGRDELASAIARG 251
V+ AVL +PS+LVE GFISNP EA L + + +D++A A+ +G
Sbjct: 327 KVEQAGFAVLKSPDIPSILVETGFISNPTEASRLNTSSYQDKMAGAMHQG 376
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.316 0.134 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,443,693,734
Number of Sequences: 5470121
Number of extensions: 60757957
Number of successful extensions: 185721
Number of sequences better than 1.0e-05: 500
Number of HSP's better than 0.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 705
Number of HSP's that attempted gapping in prelim test: 183849
Number of HSP's gapped (non-prelim): 1214
length of query: 396
length of database: 1,894,087,724
effective HSP length: 135
effective length of query: 261
effective length of database: 1,155,621,389
effective search space: 301617182529
effective search space used: 301617182529
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 131 (55.1 bits)