R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|8778208|gb|AAF79217.1|AC006917_2 (AC006917) F10B6.3 [Arabidopsis thaliana]
Length = 336
Frame 2 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | 336
0 150 300
Plus Strand HSPs:
Score = 207 (72.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 37/39 (94%), Positives = 39/39 (100%), Frame = +2
Query: 14 FFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
FFFGYMACICYGFFLMLG+VGFRA+LLFVRHIYRSIKCE
Sbjct: 298 FFFGYMACICYGFFLMLGTVGFRAALLFVRHIYRSIKCE 336
>gi|6010773|gb|AAF01248.1|AF187853_1 (AF187853) putative multispanning membrane
protein [Populus x canescens]
Length = 104
Frame 2 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | | | 104
0 20 40 60 80 100
Plus Strand HSPs:
Score = 202 (71.1 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 35/39 (89%), Positives = 37/39 (94%), Frame = +2
Query: 14 FFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
FFFGYMAC+CYGFFLMLGS+GFRASL FVRHIY SIKCE
Sbjct: 66 FFFGYMACVCYGFFLMLGSIGFRASLFFVRHIYHSIKCE 104
>gi|7527721|gb|AAF63170.1|AC010657_6 (AC010657) T5E21.15 [Arabidopsis thaliana]
Length = 546
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | 546
0 150 300 450
Plus Strand HSPs:
Score = 207 (72.9 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 37/39 (94%), Positives = 39/39 (100%), Frame = +2
Query: 14 FFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
FFFGYMACICYGFFLMLG+VGFRA+LLFVRHIYRSIKCE
Sbjct: 508 FFFGYMACICYGFFLMLGTVGFRAALLFVRHIYRSIKCE 546
>gi|4406780|gb|AAD20090.1| (AC006532) putative endosomal protein [Arabidopsis
thaliana]
Length = 592
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | 592
0 150 300 450
Plus Strand HSPs:
Score = 207 (72.9 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 37/39 (94%), Positives = 39/39 (100%), Frame = +2
Query: 14 FFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
FFFGYMACICYGFFLMLG+VGFRA+LLFVRHIYRSIKCE
Sbjct: 554 FFFGYMACICYGFFLMLGTVGFRAALLFVRHIYRSIKCE 592
>gi|9758717|dbj|BAB09103.1| (AB017069) endosomal protein-like [Arabidopsis
thaliana]
Length = 593
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | 593
0 150 300 450
Plus Strand HSPs:
Score = 201 (70.8 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 36/39 (92%), Positives = 38/39 (97%), Frame = +2
Query: 14 FFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
FFFGYMACICYGFFLMLG++GF ASLLFVRHIYRSIKCE
Sbjct: 555 FFFGYMACICYGFFLMLGTIGFCASLLFVRHIYRSIKCE 593
>gi|6562330|emb|CAB62549.1| (AJ249959) multispanning membrane protein 70
[Arabidopsis thaliana]
Length = 66
Frame 2 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | | 66
0 20 40 60
Plus Strand HSPs:
Score = 139 (48.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 23/39 (58%), Positives = 31/39 (79%), Frame = +2
Query: 14 FFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
F+ GY A +CY FL+LG++ F ASL+F+RHIYRS+K E
Sbjct: 28 FYLGYTALLCYALFLVLGTISFLASLMFIRHIYRSVKLE 66
>gi|1931647|gb|AAB65482.1| (U95973) endomembrane protein EMP70 precusor isolog;
68664-64364 [Arabidopsis thaliana]
Length = 589
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | 589
0 150 300 450
Plus Strand HSPs:
Score = 114 (40.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 20/39 (51%), Positives = 27/39 (69%), Frame = +2
Query: 14 FFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
F+FGY C G ++ G+VG+ S LFVR IYR+IKC+
Sbjct: 551 FYFGYTMMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 589
>gi|12321575|gb|AAG50838.1|AC073944_5 (AC073944) multispanning membrane
protein, putative [Arabidopsis thaliana]
Length = 637
Frame 2 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | 637
0 150 300 450 600
Plus Strand HSPs:
Score = 114 (40.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 21/38 (55%), Positives = 27/38 (71%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
+FGYM I Y FF++ GS+GF A L FVR IY S+K +
Sbjct: 600 YFGYMIIISYSFFVLTGSIGFYACLWFVRKIYSSVKID 637
>gi|9294023|dbj|BAB01926.1| (AP001307) multispanning membrane protein-like
[Arabidopsis thaliana]
Length = 641
Frame 2 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | 641
0 150 300 450 600
Plus Strand HSPs:
Score = 107 (37.7 bits), Expect = 0.00051, P = 0.00051
Identities = 19/38 (50%), Positives = 26/38 (68%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
+FGYM I Y FF++ G++GF A FVR IY S+K +
Sbjct: 604 YFGYMIIISYAFFVLTGTIGFYACFWFVRKIYSSVKID 641
>gi|9755055|gb|AAF98161.1|AF269152_1 (AF269152) transmembrane protein TM9SF1
[Mus musculus]
Length = 605
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | || 605
0 150 300 450 600
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.0027, P = 0.0027
Identities = 19/38 (50%), Positives = 27/38 (71%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
FFGY Y FFLMLG++ F +SL F+R+IY ++K +
Sbjct: 568 FFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 605
>gi|5453742 ref|NP_006396.1| transmembrane 9 superfamily member 1;
multispanning membrane protein (70kD); transmembrane protein 9
superfamily member 1 [Homo sapiens] >gi|2276460|gb|AAC51782.1|
(U94831) multispanning membrane protein [Homo sapiens]
Length = 606
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | || 606
0 150 300 450 600
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.0027, P = 0.0027
Identities = 19/38 (50%), Positives = 27/38 (71%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
FFGY Y FFLMLG++ F +SL F+R+IY ++K +
Sbjct: 569 FFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
>gi|11433994 ref|XP_007305.1| transmembrane 9 superfamily member 1 [Homo
sapiens]
Length = 606
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | || 606
0 150 300 450 600
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.0027, P = 0.0027
Identities = 19/38 (50%), Positives = 27/38 (71%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
FFGY Y FFLMLG++ F +SL F+R+IY ++K +
Sbjct: 569 FFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
>gi|11281523|pir||T50793 hypothetical protein T30N20_110 - Arabidopsis thaliana
>gi|8979718|emb|CAB96839.1| (AL365234) putative protein
[Arabidopsis thaliana]
Length = 639
Frame 2 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | 639
0 150 300 450 600
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.0029, P = 0.0029
Identities = 18/38 (47%), Positives = 25/38 (65%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
+FGYM Y FF++ G++GF A L F R IY S+K +
Sbjct: 602 YFGYMLIASYAFFVLTGTIGFYACLWFTRLIYSSVKID 639
>gi|7662028 ref|NP_055557.1| KIAA0255 gene product [Homo sapiens] >gi|11420945
ref|XP_009540.1| KIAA0255 gene product [Homo sapiens]
>gi|1665777|dbj|BAA13385.1| (D87444) Similar to S.cerevisiae EMP70
protein precursor (S25110) [Homo sapiens]
Length = 625
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 625
0 150 300 450 600
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.0096, P = 0.0095
Identities = 16/38 (42%), Positives = 27/38 (71%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
+FGY A + F+L+ G++GF A+ +FVR IY ++K +
Sbjct: 588 YFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 625
>gi|4115377|gb|AAD03378.1| (AC005967) putative multispanning membrane protein
[Arabidopsis thaliana]
Length = 659
Frame 2 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | 659
0 150 300 450 600
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.010, P = 0.010
Identities = 17/38 (44%), Positives = 24/38 (63%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
+FGYM + Y FF+ G++GF A F R IY S+K +
Sbjct: 622 YFGYMLIVSYVFFVFTGAIGFYACFWFTRLIYSSVKID 659
>gi|7018399|emb|CAB75607.1| (AL049539) dJ836N17.2 (KIAA0255 protein) [Homo
sapiens]
Length = 780
Frame 2 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | 780
0 150 300 450 600 750
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.013, P = 0.012
Identities = 16/38 (42%), Positives = 27/38 (71%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
+FGY A + F+L+ G++GF A+ +FVR IY ++K +
Sbjct: 743 YFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 780
>gi|7498641|pir||T32472 hypothetical protein F08F1.7 - Caenorhabditis elegans
>gi|2435604|gb|AAB71307.1| (AF026213) strong similarity to
Saccharomyces cerevisiae endosomal P24A protein (SP:P32802)
[Caenorhabditis elegans]
Length = 655
Frame 2 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | 655
0 150 300 450 600
Plus Strand HSPs:
Score = 93 (32.7 bits), Expect = 0.050, P = 0.049
Identities = 17/38 (44%), Positives = 25/38 (65%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
+F Y + + FFLM G++GF A+ FVR IY S+K +
Sbjct: 618 YFSYTSIFVFMFFLMTGTIGFLATYYFVRKIYGSVKVD 655
>gi|7298704|gb|AAF53917.1| (AE003667) CG9318 gene product [Drosophila
melanogaster]
Length = 659
Frame 2 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | 659
0 150 300 450 600
Plus Strand HSPs:
Score = 90 (31.7 bits), Expect = 0.28, P = 0.24
Identities = 16/38 (42%), Positives = 25/38 (65%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
+FGY A + + FFL+ G++GF A F+R IY +K +
Sbjct: 622 YFGYTAIMVFLFFLLTGTIGFFACFWFIRKIYSVVKVD 659
>gi|7021042|dbj|BAA91362.1| (AK000756) unnamed protein product [Homo sapiens]
Length = 458
Frame 2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | || 458
0 150 300 450
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 0.77, P = 0.54
Identities = 15/39 (38%), Positives = 24/39 (61%), Frame = +2
Query: 14 FFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
F+FGYMA +M G++G+ + FVR IY ++K +
Sbjct: 420 FYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 458
>gi|6650722|gb|AAF21983.1| (AF116347) SM-11044 binding protein [Homo sapiens]
Length = 578
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | 578
0 150 300 450
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 1.0, P = 0.65
Identities = 15/39 (38%), Positives = 24/39 (61%), Frame = +2
Query: 14 FFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
F+FGYMA +M G++G+ + FVR IY ++K +
Sbjct: 540 FYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 578
>gi|10047130 ref|NP_064508.1| endomembrane protein emp70 precursor isolog [Homo
sapiens] >gi|7677068|gb|AAF67014.1|AF160213_1 (AF160213)
endomembrane protein emp70 precursor isolog [Homo sapiens]
Length = 586
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | 586
0 150 300 450
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 1.1, P = 0.65
Identities = 15/39 (38%), Positives = 24/39 (61%), Frame = +2
Query: 14 FFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
F+FGYMA +M G++G+ + FVR IY ++K +
Sbjct: 548 FYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 586
>gi|9755053|gb|AAF98160.1|AF269151_1 (AF269151) transmembrane protein TM9SF3
[Mus musculus]
Length = 587
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | 587
0 150 300 450
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 1.1, P = 0.65
Identities = 15/39 (38%), Positives = 24/39 (61%), Frame = +2
Query: 14 FFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
F+FGYMA +M G++G+ + FVR IY ++K +
Sbjct: 549 FYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 587
>gi|9755051|gb|AAF98159.1|AF269150_1 (AF269150) transmembrane protein TM9SF3
[Homo sapiens]
Length = 589
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | 589
0 150 300 450
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 1.1, P = 0.65
Identities = 15/39 (38%), Positives = 24/39 (61%), Frame = +2
Query: 14 FFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
F+FGYMA +M G++G+ + FVR IY ++K +
Sbjct: 551 FYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 589
>gi|7295446|gb|AAF50762.1| (AE003565) CG10590 gene product [Drosophila
melanogaster]
Length = 567
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | 567
0 150 300 450
Plus Strand HSPs:
Score = 84 (29.6 bits), Expect = 2.0, P = 0.87
Identities = 16/39 (41%), Positives = 25/39 (64%), Frame = +2
Query: 14 FFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
F+FGYMA ++ G+VG+ + LFVR IY ++K +
Sbjct: 529 FYFGYMALFSGALGIICGTVGYVGTNLFVRKIYSNVKID 567
>gi|7493096|pir||T39285 probable transmembrane protein - fission yeast
(Schizosaccharomyces pombe) >gi|5531470|emb|CAB50971.1| (AL096851)
putative transmembrane protein [Schizosaccharomyces pombe]
Length = 629
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 629
0 150 300 450 600
Plus Strand HSPs:
Score = 84 (29.6 bits), Expect = 2.3, P = 0.90
Identities = 18/38 (47%), Positives = 22/38 (57%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
+FGY I F + GSVGF + LFV IY SIK +
Sbjct: 592 YFGYSLLISVLVFFLCGSVGFFGAFLFVNKIYASIKID 629
>gi|417434|sp|P32802|EM70_YEAST ENDOSOMAL P24A PROTEIN PRECURSOR (70 KD
ENDOMEMBRANE PROTEIN) (PHEROMONE ALPHA-FACTOR TRANSPORTER) (ACIDIC
24 KD LATE ENDOCYTIC INTERMEDIATE COMPONENT)
>gi|3673|emb|CAA47730.1| (X67316) p24a 70 kDa precursor
[Saccharomyces cerevisiae]
Length = 667
Frame 2 hits (HSPs): ___
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 667
0 150 300 450 600
__________________
Annotated Domains:
DOMO DM04755: 1..666
PRODOM PD191871: EM70(1) Q12101(1) 1..31
PRODOM PD005508: EM70(2) Q12101(2) Q04562(2) 33..123
PRODOM PD191872: EM70(1) Q12101(1) 125..152
PRODOM PD025463: EM70(1) Q12101(1) Q04562(1) 154..252
PRODOM PD005508: EM70(2) Q12101(2) Q04562(2) 254..666
__________________
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 3.4, P = 0.97
Identities = 18/38 (47%), Positives = 25/38 (65%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
+ GY + I L+ GS+GF +S+LFVR IY SIK +
Sbjct: 630 YVGYSSVISLLCCLVTGSIGFISSMLFVRKIYSSIKVD 667
>gi|6323112 ref|NP_013184.1| endosomal membrane protein; Emp70p [Saccharomyces
cerevisiae] >gi|2131246|pir||S64915 EMP70 protein precursor - yeast
(Saccharomyces cerevisiae) >gi|1256885|gb|AAB67587.1| (U53880)
Emp70p: P24A protein [Saccharomyces cerevisiae]
>gi|1360449|emb|CAA97643.1| (Z73255) ORF YLR083c [Saccharomyces
cerevisiae]
Length = 667
Frame 2 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | 667
0 150 300 450 600
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 3.4, P = 0.97
Identities = 18/38 (47%), Positives = 25/38 (65%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
+ GY + I L+ GS+GF +S+LFVR IY SIK +
Sbjct: 630 YVGYSSVISLLCCLVTGSIGFISSMLFVRKIYSSIKVD 667
>gi|7511376|pir||T28058 hypothetical protein ZK858.6 - Caenorhabditis elegans
>gi|3881856|emb|CAB02141.1| (Z79759) Similarity to Yeast endosomal
P24A protein (SW:EM70_YEAST)~cDNA EST CEMSB40F comes from this
gene~cDNA EST yk178b7.5 comes from this gene~cDNA EST yk385b5.5
comes from this gene~cDNA EST yk385b5.3 comes from this gene~cDNA
EST yk586d5.5 comes >
Length = 656
Frame 2 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | 656
0 150 300 450 600
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 4.5, P = 0.99
Identities = 15/38 (39%), Positives = 23/38 (60%), Frame = +2
Query: 17 FFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 130
+F Y + I FF M G++GF AS F+ IY ++K +
Sbjct: 619 YFSYSSLIALTFFFMTGTIGFYASHFFLTKIYAAVKID 656
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=6.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.352 0.152 0.551
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.351 0.160 0.556
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.367 0.167 0.661
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.355 0.155 0.556
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.335 0.142 0.463
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.358 0.158 0.531
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 130 130 10. 72 3 12 22 0.11 33
29 0.12 35
+2 0 130 130 10. 72 3 12 22 0.11 33
29 0.12 35
+1 0 130 130 10. 72 3 12 22 0.11 33
29 0.12 35
-1 0 130 130 10. 72 3 12 22 0.11 33
29 0.12 35
-2 0 130 130 10. 72 3 12 22 0.11 33
29 0.12 35
-3 0 130 130 10. 72 3 12 22 0.11 33
29 0.12 35
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 28
No. of states in DFA: 593 (58 KB)
Total size of DFA: 167 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 128.12u 1.01s 129.13t Elapsed: 00:00:22
Total cpu time: 128.15u 1.05s 129.20t Elapsed: 00:00:22
Start: Wed Jan 23 18:27:40 2002 End: Wed Jan 23 18:28:02 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000