BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SP_1448
(311 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15901298|ref|NP_345902.1| hypothetical protein SP_1448 [... 637 0.0
gi|149002841|ref|ZP_01827767.1| hypothetical protein CGSSp1... 635 e-180
gi|148992669|ref|ZP_01822337.1| hypothetical protein CGSSp9... 635 e-180
gi|149011675|ref|ZP_01832871.1| hypothetical protein CGSSp1... 633 e-180
gi|148990256|ref|ZP_01821467.1| hypothetical protein CGSSp6... 633 e-180
gi|149019391|ref|ZP_01834753.1| hypothetical protein CGSSp2... 633 e-180
gi|15903346|ref|NP_358896.1| hypothetical protein spr1303 [... 632 e-180
gi|148997494|ref|ZP_01825099.1| hypothetical protein CGSSp1... 632 e-180
gi|125717206|ref|YP_001034339.1| hypothetical protein SSA_0... 421 e-116
gi|157075720|gb|ABV10403.1| beta-lactamase-like or putative... 410 e-113
gi|81096183|ref|ZP_00874532.1| Beta-lactamase [Streptococcu... 350 6e-95
gi|24378893|ref|NP_720848.1| putative secreted esterase [St... 345 2e-93
gi|55821643|ref|YP_140085.1| hypothetical protein stu1667 [... 328 2e-88
gi|116628352|ref|YP_820971.1| Beta-lactamase class C and ot... 328 3e-88
gi|55823570|ref|YP_142011.1| hypothetical protein str1667 [... 327 5e-88
gi|148984789|ref|ZP_01818042.1| hypothetical protein CGSSp3... 312 2e-83
gi|71904220|ref|YP_281023.1| penicillin-binding protein [St... 306 1e-81
gi|146317855|ref|YP_001197567.1| Beta-lactamase class C and... 305 2e-81
gi|94989205|ref|YP_597306.1| beta-lactamase family protein ... 305 2e-81
gi|94995025|ref|YP_603123.1| Beta-lactamase family protein ... 305 2e-81
gi|15675673|ref|NP_269847.1| putative esterase [Streptococc... 305 3e-81
gi|19746779|ref|NP_607915.1| putative esterase [Streptococc... 304 4e-81
gi|25011813|ref|NP_736208.1| hypothetical protein gbs1774 [... 302 2e-80
gi|76798403|ref|ZP_00780644.1| beta-lactamase [Streptococcu... 302 2e-80
gi|22537868|ref|NP_688719.1| hypothetical protein SAG1729 [... 302 2e-80
gi|77412148|ref|ZP_00788471.1| beta-lactamase [Streptococcu... 301 2e-80
gi|148984790|ref|ZP_01818043.1| hypothetical protein CGSSp3... 300 5e-80
gi|15674027|ref|NP_268202.1| hypothetical protein L114054 [... 248 5e-64
gi|125625083|ref|YP_001033566.1| hypothetical protein llmg_... 237 7e-61
gi|116512992|ref|YP_811899.1| Beta-lactamase class C relate... 235 3e-60
gi|29377077|ref|NP_816231.1| hypothetical protein EF2590 [E... 197 5e-49
gi|69245317|ref|ZP_00603361.1| Beta-lactamase [Enterococcus... 192 3e-47
gi|92090073|ref|ZP_01274980.1| Beta-lactamase [Lactobacillu... 172 3e-41
gi|116333903|ref|YP_795430.1| Beta-lactamase class C relate... 170 1e-40
gi|77745349|gb|ABB02575.1| putative esterase [Lactobacillus... 168 4e-40
gi|148543679|ref|YP_001271049.1| beta-lactamase [Lactobacil... 168 5e-40
gi|90961560|ref|YP_535476.1| Beta-lactamase family protein ... 167 6e-40
gi|81428756|ref|YP_395756.1| hypothetical protein LSA1147 [... 167 1e-39
gi|28378955|ref|NP_785847.1| esterase (putative) [Lactobaci... 160 1e-37
gi|116629886|ref|YP_815058.1| Beta-lactamase class C relate... 160 1e-37
gi|116513787|ref|YP_812693.1| Beta-lactamase class C relate... 157 6e-37
gi|104773781|ref|YP_618761.1| Putative penicillin binding p... 157 7e-37
gi|42518852|ref|NP_964782.1| hypothetical protein LJ0927 [L... 156 2e-36
gi|116494649|ref|YP_806383.1| Beta-lactamase class C relate... 154 5e-36
gi|116493083|ref|YP_804818.1| Beta-lactamase class C relate... 145 3e-33
gi|116490470|ref|YP_810014.1| Beta-lactamase class C relate... 139 2e-31
gi|28379670|ref|NP_786562.1| esterase (putative) [Lactobaci... 139 2e-31
gi|112148504|gb|ABI13550.1| beta-lactamase class C-like pro... 139 2e-31
gi|58337068|ref|YP_193653.1| putative esterase [Lactobacill... 137 1e-30
gi|16801096|ref|NP_471364.1| hypothetical protein lin2030 [... 130 8e-29
gi|145544438|ref|XP_001457904.1| hypothetical protein [Para... 130 1e-28
gi|153175143|ref|ZP_01930538.1| hypothetical protein LMIG_0... 127 1e-27
gi|47096499|ref|ZP_00234091.1| peptidase, putative [Listeri... 125 3e-27
gi|21220752|ref|NP_626531.1| secreted esterase [Streptomyce... 123 1e-26
gi|47093833|ref|ZP_00231578.1| peptidase, putative [Listeri... 122 4e-26
gi|46908149|ref|YP_014538.1| peptidase, putative [Listeria ... 122 4e-26
gi|16803955|ref|NP_465440.1| hypothetical protein lmo1916 [... 122 4e-26
gi|29375091|ref|NP_814244.1| hypothetical protein EF0460 [E... 121 5e-26
gi|29832461|ref|NP_827095.1| beta-lactamase [Streptomyces a... 121 5e-26
gi|153196423|ref|ZP_01940793.1| hypothetical protein LMRG_0... 120 1e-25
gi|116630390|ref|YP_819543.1| Beta-lactamase class C or oth... 119 4e-25
gi|87306383|ref|ZP_01088530.1| putative esterase [Blastopir... 118 5e-25
gi|116873351|ref|YP_850132.1| hypothetical protein lwe1935 ... 115 5e-24
gi|118376842|ref|XP_001021603.1| beta-lactamase family prot... 113 2e-23
gi|89095929|ref|ZP_01168823.1| beta-lactamase [Bacillus sp.... 112 2e-23
gi|20806739|ref|NP_621910.1| Beta-lactamase class C and oth... 112 2e-23
gi|116496195|ref|YP_807929.1| Beta-lactamase class C relate... 109 2e-22
gi|72160624|ref|YP_288281.1| putative secreted esterase [Th... 108 3e-22
gi|116622732|ref|YP_824888.1| Uncharacterised conserved pro... 107 1e-21
gi|110601825|ref|ZP_01389992.1| Beta-lactamase [Geobacter s... 105 3e-21
gi|67939162|ref|ZP_00531672.1| Beta-lactamase [Chlorobium p... 105 3e-21
gi|118035447|ref|ZP_01506855.1| Uncharacterised conserved p... 105 5e-21
gi|121529763|ref|ZP_01662374.1| beta-lactamase, putative [R... 103 1e-20
gi|149176975|ref|ZP_01855584.1| Uncharacterised conserved p... 103 1e-20
gi|118745247|ref|ZP_01593225.1| beta-lactamase [Geobacter l... 103 1e-20
gi|119356495|ref|YP_911139.1| beta-lactamase [Chlorobium ph... 103 2e-20
gi|23098122|ref|NP_691588.1| beta-lactamase [Oceanobacillus... 103 2e-20
gi|32471513|ref|NP_864506.1| putative esterase [Rhodopirell... 102 2e-20
gi|124520411|ref|ZP_01695567.1| beta-lactamase [Bacillus co... 102 2e-20
gi|138894950|ref|YP_001125403.1| Beta-lactamase (cephalospo... 102 3e-20
gi|78186327|ref|YP_374370.1| D-alanyl-D-alanine carboxypept... 102 3e-20
gi|83570653|ref|ZP_00922096.1| COG1680: Beta-lactamase clas... 102 4e-20
gi|145219302|ref|YP_001130011.1| beta-lactamase [Prosthecoc... 101 5e-20
gi|126647102|ref|ZP_01719612.1| putative hydrolase/beta lac... 101 6e-20
gi|56963340|ref|YP_175071.1| penicillin binding protein [Ba... 101 7e-20
gi|157077854|gb|ABV17562.1| beta-lactamase [Escherichia col... 99 3e-19
gi|145618902|ref|ZP_01774957.1| beta-lactamase [Geobacter b... 99 3e-19
gi|75187183|ref|ZP_00700450.1| COG1680: Beta-lactamase clas... 99 3e-19
gi|75211400|ref|ZP_00711490.1| COG1680: Beta-lactamase clas... 99 3e-19
gi|68550512|ref|ZP_00589959.1| Beta-lactamase [Pelodictyon ... 98 6e-19
gi|39997145|ref|NP_953096.1| hypothetical protein GSU2047 [... 98 8e-19
gi|58040557|ref|YP_192521.1| Putative beta-lactamase [Gluco... 98 8e-19
gi|74312965|ref|YP_311384.1| putative beta-lactamase [Shige... 97 1e-18
gi|134096975|ref|YP_001102636.1| beta-lactamase [Saccharopo... 97 1e-18
gi|83716176|ref|YP_439122.1| beta-lactamase, putative [Burk... 96 2e-18
gi|48477091|ref|YP_022797.1| beta lactamase [Picrophilus to... 96 2e-18
gi|15832555|ref|NP_311328.1| hypothetical protein ECs3301 [... 96 2e-18
gi|15802961|ref|NP_288991.1| hypothetical protein Z3695 [Es... 96 2e-18
gi|94969642|ref|YP_591690.1| Uncharacterised conserved prot... 96 3e-18
gi|75196443|ref|ZP_00706513.1| COG1680: Beta-lactamase clas... 96 4e-18
gi|157067576|gb|ABV06831.1| beta-lactamase [Escherichia col... 96 4e-18
gi|67918672|ref|ZP_00512267.1| Beta-lactamase [Chlorobium l... 95 5e-18
gi|21225520|ref|NP_631299.1| secreted protein [Streptomyces... 95 6e-18
gi|126652885|ref|ZP_01725028.1| penicillin binding protein ... 94 9e-18
gi|78222174|ref|YP_383921.1| Beta-lactamase [Geobacter meta... 94 1e-17
gi|83815520|ref|YP_444518.1| beta-N-acetylglucosaminidase [... 94 1e-17
gi|94969643|ref|YP_591691.1| beta-lactamase [Acidobacteria ... 94 1e-17
gi|75515775|ref|ZP_00737910.1| COG1680: Beta-lactamase clas... 94 1e-17
gi|108803472|ref|YP_643409.1| beta-lactamase [Rubrobacter x... 94 1e-17
gi|84495173|ref|ZP_00994292.1| putative beta-lactamase [Jan... 94 2e-17
gi|157081842|gb|ABV11520.1| hypothetical protein CKO_00357 ... 94 2e-17
gi|124531844|ref|ZP_01701951.1| beta-lactamase [Escherichia... 93 2e-17
gi|89109244|ref|AP_003024.1| predicted periplasmic esterase... 92 3e-17
gi|126348156|emb|CAJ89877.1| putative beta-lactamase [Strep... 91 1e-16
gi|78188455|ref|YP_378793.1| D-alanyl-D-alanine carboxypept... 90 2e-16
gi|76260608|ref|ZP_00768241.1| Beta-lactamase [Chloroflexus... 89 2e-16
gi|118579153|ref|YP_900403.1| beta-lactamase [Pelobacter pr... 89 4e-16
gi|110596850|ref|ZP_01385140.1| Beta-lactamase [Chlorobium ... 88 6e-16
gi|52078659|ref|YP_077450.1| hypothetical protein BL02717 [... 88 8e-16
gi|68553419|ref|ZP_00592794.1| Beta-lactamase [Prosthecochl... 87 2e-15
gi|51891440|ref|YP_074131.1| putative beta-lactamase [Symbi... 86 2e-15
gi|21673163|ref|NP_661228.1| D-alanyl-D-alanine carboxypept... 86 2e-15
gi|42523428|ref|NP_968808.1| D-alanyl-D-alanine carboxypept... 86 2e-15
gi|145622548|ref|ZP_01778506.1| beta-lactamase [Petrotoga m... 86 3e-15
gi|16765798|ref|NP_461413.1| hypothetical protein STM2478 [... 86 4e-15
gi|56412639|ref|YP_149714.1| hypothetical protein SPA0391 [... 85 4e-15
gi|116493209|ref|YP_804944.1| Beta-lactamase class C relate... 85 4e-15
gi|62181044|ref|YP_217461.1| hypothetical protein SC2474 [S... 85 5e-15
gi|29827802|ref|NP_822436.1| beta-lactamase [Streptomyces a... 85 5e-15
gi|21225825|ref|NP_631604.1| esterase [Streptomyces coelico... 85 5e-15
gi|15893474|ref|NP_346823.1| Similar to beta-lactamase [Clo... 85 7e-15
gi|16761395|ref|NP_457012.1| hypothetical protein STY2716 [... 84 1e-14
gi|124515092|gb|EAY56603.1| Beta-lactamase class C protein ... 83 2e-14
gi|148656485|ref|YP_001276690.1| beta-lactamase [Roseiflexu... 83 2e-14
gi|34539891|ref|NP_904370.1| glycosyl hydrolase, family 3 [... 83 2e-14
gi|120406837|ref|YP_956666.1| beta-lactamase [Mycobacterium... 83 2e-14
gi|149372824|ref|ZP_01891845.1| b-glycosidase, glycoside hy... 82 3e-14
gi|51891773|ref|YP_074464.1| putative beta-lactamase [Symbi... 82 3e-14
gi|126353991|ref|ZP_01711002.1| beta-lactamase [Caldivirga ... 82 4e-14
gi|118717995|ref|ZP_01570529.1| Uncharacterised conserved p... 82 4e-14
gi|53711716|ref|YP_097708.1| putative esterase [Bacteroides... 82 6e-14
gi|60679954|ref|YP_210098.1| putative beta-lactamase/acylhy... 82 6e-14
gi|70996903|ref|XP_753206.1| beta-lactamase, putative [Aspe... 81 7e-14
gi|83857332|ref|ZP_00950860.1| putative hydrolase/beta lact... 81 8e-14
gi|134291689|ref|YP_001115458.1| Uncharacterised conserved ... 80 1e-13
gi|118696065|ref|ZP_01554147.1| Uncharacterised conserved p... 80 1e-13
gi|116747994|ref|YP_844681.1| beta-lactamase [Syntrophobact... 80 1e-13
gi|119477051|ref|XP_001259228.1| beta-lactamase, putative [... 80 2e-13
gi|118468173|ref|YP_891012.1| beta-lactamase [Mycobacterium... 80 2e-13
gi|148263854|ref|YP_001230560.1| beta-lactamase [Geobacter ... 80 2e-13
gi|110636440|ref|YP_676647.1| b-glycosidase, glycoside hydr... 79 2e-13
gi|119472255|ref|ZP_01614434.1| hypothetical protein ATW7_1... 79 3e-13
gi|118469428|ref|YP_891075.1| beta-lactamase [Mycobacterium... 79 3e-13
gi|118465211|ref|YP_883147.1| beta-lactamase [Mycobacterium... 78 6e-13
gi|118047534|ref|ZP_01516168.1| beta-lactamase [Chloroflexu... 78 7e-13
gi|77359479|ref|YP_339054.1| hypothetical protein PSHAa0522... 77 1e-12
gi|145618149|ref|ZP_01774210.1| beta-lactamase [Geobacter b... 77 1e-12
gi|94495000|ref|ZP_01301581.1| esterase [Sphingomonas sp. S... 77 2e-12
gi|156743060|ref|YP_001433189.1| beta-lactamase [Roseiflexu... 76 3e-12
gi|110600253|ref|ZP_01388478.1| Beta-lactamase [Geobacter s... 76 3e-12
gi|94264234|ref|ZP_01288029.1| Beta-lactamase [delta proteo... 75 4e-12
gi|109900458|ref|YP_663713.1| N-acetylmuramyl-L-alanine ami... 75 7e-12
gi|108798683|ref|YP_638880.1| beta-lactamase [Mycobacterium... 74 1e-11
gi|145221098|ref|YP_001131776.1| beta-lactamase [Mycobacter... 74 1e-11
gi|154494473|ref|ZP_02033793.1| hypothetical protein PARMER... 73 2e-11
gi|20806757|ref|NP_621928.1| Beta-lactamase class C and oth... 72 3e-11
gi|86607829|ref|YP_476591.1| carboxylesterase, beta-lactama... 72 5e-11
gi|154684690|ref|YP_001419851.1| YbbE [Bacillus amyloliquef... 72 5e-11
gi|94266207|ref|ZP_01289916.1| Beta-lactamase [delta proteo... 72 6e-11
gi|150008942|ref|YP_001303685.1| glycoside hydrolase family... 71 7e-11
gi|121543724|ref|ZP_01675285.1| putative beta-lactamase [Ca... 71 7e-11
gi|84495405|ref|ZP_00994524.1| putative beta-lactamase [Jan... 71 8e-11
gi|88802422|ref|ZP_01117949.1| beta-N-acetylglucosaminidase... 70 1e-10
gi|16077235|ref|NP_388048.1| hypothetical protein BSU01670 ... 70 2e-10
gi|149280310|ref|ZP_01886432.1| beta-N-acetylglucosaminidas... 70 2e-10
gi|66820226|ref|XP_643747.1| hypothetical protein DDBDRAFT_... 69 3e-10
gi|86605682|ref|YP_474445.1| carboxylesterase, beta-lactama... 69 3e-10
gi|88805315|ref|ZP_01120834.1| beta-N-acetylglucosaminidase... 69 4e-10
gi|126645496|ref|ZP_01718040.1| beta-N-acetylglucosaminidas... 69 5e-10
gi|121714206|ref|XP_001274714.1| beta-lactamase, putative [... 68 6e-10
gi|75178030|ref|ZP_00698089.1| COG1680: Beta-lactamase clas... 68 8e-10
gi|153806098|ref|ZP_01958766.1| hypothetical protein BACCAC... 67 1e-09
gi|56807536|ref|ZP_00365462.1| COG1680: Beta-lactamase clas... 67 2e-09
gi|53711857|ref|YP_097849.1| beta-N-acetylglucosaminidase [... 67 2e-09
gi|126434282|ref|YP_001069973.1| beta-lactamase [Mycobacter... 66 2e-09
gi|150024851|ref|YP_001295677.1| Probable beta-N-acetylgluc... 66 3e-09
gi|86134048|ref|ZP_01052630.1| beta-N-acetylglucosaminidase... 66 4e-09
gi|156111018|gb|EDO12763.1| hypothetical protein BACOVA_015... 65 5e-09
gi|108757137|ref|YP_630155.1| beta-lactamase [Myxococcus xa... 64 1e-08
gi|56963167|ref|YP_174895.1| penicillin-binding protein 4 [... 63 2e-08
gi|110599517|ref|ZP_01387754.1| Beta-lactamase [Geobacter s... 63 2e-08
gi|60680085|ref|YP_210229.1| possible beta-N-acetylglucosam... 62 4e-08
gi|83859454|ref|ZP_00952975.1| similar to penicillin-bindin... 62 4e-08
gi|88806869|ref|ZP_01122385.1| D-alanyl-D-alanine carboxype... 62 4e-08
gi|13476034|ref|NP_107604.1| probable esterase [Mesorhizobi... 62 4e-08
gi|126663658|ref|ZP_01734654.1| b-glycosidase, glycoside hy... 62 5e-08
gi|118743677|ref|ZP_01591679.1| beta-lactamase [Geobacter l... 62 5e-08
gi|154497153|ref|ZP_02035849.1| hypothetical protein BACCAP... 62 6e-08
gi|1256134|dbj|BAA19501.1| YbbE [Bacillus subtilis] 61 7e-08
gi|53686966|ref|ZP_00106589.2| COG1680: Beta-lactamase clas... 61 1e-07
gi|126646070|ref|ZP_01718587.1| beta-lactamase family prote... 60 2e-07
gi|87307867|ref|ZP_01090010.1| Putative beta-lactamase [Bla... 60 2e-07
gi|149917387|ref|ZP_01905885.1| D-alanyl-D-alanine carboxyp... 60 2e-07
gi|115374626|ref|ZP_01461905.1| beta-lactamase [Stigmatella... 59 3e-07
gi|124003255|ref|ZP_01688105.1| beta-lactamase [Microscilla... 59 4e-07
gi|125717267|ref|YP_001034400.1| hypothetical protein SSA_0... 59 6e-07
gi|152967770|ref|YP_001363554.1| beta-lactamase [Kineococcu... 58 6e-07
gi|88713933|ref|ZP_01108013.1| penicillin-binding protein [... 58 7e-07
gi|156740942|ref|YP_001431071.1| beta-lactamase [Roseiflexu... 58 8e-07
gi|119875489|ref|ZP_01642555.1| beta-lactamase [Stenotropho... 58 9e-07
gi|120435988|ref|YP_861674.1| family 3 glycosyl hydrolase/b... 57 1e-06
gi|17227649|ref|NP_484197.1| penicillin-binding protein [No... 57 2e-06
gi|76257903|ref|ZP_00765560.1| Beta-lactamase [Chloroflexus... 57 2e-06
gi|75907742|ref|YP_322038.1| Beta-lactamase [Anabaena varia... 56 2e-06
gi|117164514|emb|CAJ88060.1| putative cmcPBP [Streptomyces ... 56 2e-06
gi|146302515|ref|YP_001197106.1| beta-lactamase [Flavobacte... 56 3e-06
gi|126646677|ref|ZP_01719187.1| Beta-lactamase [Algoriphagu... 55 4e-06
gi|83857770|ref|ZP_00951298.1| penicillin-binding protein, ... 55 4e-06
gi|88704719|ref|ZP_01102432.1| penicillin-binding protein [... 55 4e-06
gi|94971974|ref|YP_594014.1| beta-lactamase [Deinococcus ge... 55 5e-06
gi|49477052|ref|YP_035273.1| beta-lactamase [Bacillus thuri... 55 5e-06
gi|47564982|ref|ZP_00236026.1| fmtA-like protein, putative ... 55 6e-06
gi|54295253|ref|YP_127668.1| hypothetical protein lpl2336 [... 55 6e-06
gi|52842621|ref|YP_096420.1| AMPC cephalosporinase [Legione... 55 7e-06
gi|126663980|ref|ZP_01734974.1| penicillin-binding protein ... 55 7e-06
>gi|15901298|ref|NP_345902.1| hypothetical protein SP_1448 [Streptococcus pneumoniae TIGR4]
gi|111657367|ref|ZP_01408124.1| hypothetical protein SpneT_02001420 [Streptococcus pneumoniae
TIGR4]
gi|149007282|ref|ZP_01830940.1| hypothetical protein CGSSp18BS74_00476 [Streptococcus pneumoniae
SP18-BS74]
gi|14972936|gb|AAK75542.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
gi|147761086|gb|EDK68054.1| hypothetical protein CGSSp18BS74_00476 [Streptococcus pneumoniae
SP18-BS74]
Length = 311
Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats.
Identities = 311/311 (100%), Positives = 311/311 (100%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS
Sbjct: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA
Sbjct: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG
Sbjct: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN
Sbjct: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR
Sbjct: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
Query: 301 NQVMNLIRKEE 311
NQVMNLIRKEE
Sbjct: 301 NQVMNLIRKEE 311
>gi|149002841|ref|ZP_01827767.1| hypothetical protein CGSSp14BS69_03873 [Streptococcus pneumoniae
SP14-BS69]
gi|147759135|gb|EDK66129.1| hypothetical protein CGSSp14BS69_03873 [Streptococcus pneumoniae
SP14-BS69]
Length = 311
Score = 635 bits (1637), Expect = e-180, Method: Composition-based stats.
Identities = 310/311 (99%), Positives = 310/311 (99%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQS PEHGLQTEAGLVYDLASVS
Sbjct: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSAPEHGLQTEAGLVYDLASVS 60
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA
Sbjct: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG
Sbjct: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN
Sbjct: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR
Sbjct: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
Query: 301 NQVMNLIRKEE 311
NQVMNLIRKEE
Sbjct: 301 NQVMNLIRKEE 311
>gi|148992669|ref|ZP_01822337.1| hypothetical protein CGSSp9BS68_04675 [Streptococcus pneumoniae
SP9-BS68]
gi|147928686|gb|EDK79700.1| hypothetical protein CGSSp9BS68_04675 [Streptococcus pneumoniae
SP9-BS68]
Length = 311
Score = 635 bits (1637), Expect = e-180, Method: Composition-based stats.
Identities = 310/311 (99%), Positives = 310/311 (99%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS
Sbjct: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA
Sbjct: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETK G
Sbjct: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKVG 180
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN
Sbjct: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR
Sbjct: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
Query: 301 NQVMNLIRKEE 311
NQVMNLIRKEE
Sbjct: 301 NQVMNLIRKEE 311
>gi|149011675|ref|ZP_01832871.1| hypothetical protein CGSSp19BS75_06902 [Streptococcus pneumoniae
SP19-BS75]
gi|147764106|gb|EDK71038.1| hypothetical protein CGSSp19BS75_06902 [Streptococcus pneumoniae
SP19-BS75]
Length = 311
Score = 633 bits (1632), Expect = e-180, Method: Composition-based stats.
Identities = 309/311 (99%), Positives = 310/311 (99%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQS PEHGLQTEAGLVYDLASVS
Sbjct: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSAPEHGLQTEAGLVYDLASVS 60
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA
Sbjct: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG
Sbjct: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDL+QN
Sbjct: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLSQN 240
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR
Sbjct: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
Query: 301 NQVMNLIRKEE 311
NQVMNLIRKEE
Sbjct: 301 NQVMNLIRKEE 311
>gi|148990256|ref|ZP_01821467.1| hypothetical protein CGSSp6BS73_03661 [Streptococcus pneumoniae
SP6-BS73]
gi|147924395|gb|EDK75485.1| hypothetical protein CGSSp6BS73_03661 [Streptococcus pneumoniae
SP6-BS73]
Length = 311
Score = 633 bits (1632), Expect = e-180, Method: Composition-based stats.
Identities = 309/311 (99%), Positives = 309/311 (99%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQS PEHGLQTEAGLVYDLASVS
Sbjct: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSAPEHGLQTEAGLVYDLASVS 60
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA
Sbjct: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG
Sbjct: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQ FLEHYLADDFARDLNQN
Sbjct: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQTFLEHYLADDFARDLNQN 240
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR
Sbjct: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
Query: 301 NQVMNLIRKEE 311
NQVMNLIRKEE
Sbjct: 301 NQVMNLIRKEE 311
>gi|149019391|ref|ZP_01834753.1| hypothetical protein CGSSp23BS72_05540 [Streptococcus pneumoniae
SP23-BS72]
gi|147931261|gb|EDK82240.1| hypothetical protein CGSSp23BS72_05540 [Streptococcus pneumoniae
SP23-BS72]
Length = 311
Score = 633 bits (1632), Expect = e-180, Method: Composition-based stats.
Identities = 310/311 (99%), Positives = 310/311 (99%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS
Sbjct: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA
Sbjct: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
PELKEAMFHLNRRSQ AFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG
Sbjct: 121 PELKEAMFHLNRRSQLAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN
Sbjct: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR
Sbjct: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
Query: 301 NQVMNLIRKEE 311
NQVMNLIRKEE
Sbjct: 301 NQVMNLIRKEE 311
>gi|15903346|ref|NP_358896.1| hypothetical protein spr1303 [Streptococcus pneumoniae R6]
gi|116516560|ref|YP_816743.1| hypothetical protein SPD_1277 [Streptococcus pneumoniae D39]
gi|15458946|gb|AAL00107.1| Hypothetical protein [Streptococcus pneumoniae R6]
gi|116077136|gb|ABJ54856.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
Length = 312
Score = 632 bits (1631), Expect = e-180, Method: Composition-based stats.
Identities = 311/312 (99%), Positives = 311/312 (99%), Gaps = 1/312 (0%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS
Sbjct: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA
Sbjct: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG
Sbjct: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN
Sbjct: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYE-KDERAQWILD 299
FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYE KDERAQWILD
Sbjct: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKKDERAQWILD 300
Query: 300 RNQVMNLIRKEE 311
RNQVMNLIRKEE
Sbjct: 301 RNQVMNLIRKEE 312
>gi|148997494|ref|ZP_01825099.1| hypothetical protein CGSSp11BS70_01362 [Streptococcus pneumoniae
SP11-BS70]
gi|147756549|gb|EDK63590.1| hypothetical protein CGSSp11BS70_01362 [Streptococcus pneumoniae
SP11-BS70]
Length = 311
Score = 632 bits (1630), Expect = e-180, Method: Composition-based stats.
Identities = 309/311 (99%), Positives = 309/311 (99%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQS PEHGLQTEAGLVYDLASVS
Sbjct: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSAPEHGLQTEAGLVYDLASVS 60
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA
Sbjct: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG
Sbjct: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLF TIKDLQIFLEHYLADDFARDLNQN
Sbjct: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFLTIKDLQIFLEHYLADDFARDLNQN 240
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR
Sbjct: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
Query: 301 NQVMNLIRKEE 311
NQVMNLIRKEE
Sbjct: 301 NQVMNLIRKEE 311
>gi|125717206|ref|YP_001034339.1| hypothetical protein SSA_0332 [Streptococcus sanguinis SK36]
gi|125497123|gb|ABN43789.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 311
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 204/310 (65%), Positives = 247/310 (79%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
M II KI+EQ++ GIYPGAS A ++ QW EFY G +DP+ G T+AGLVYDLASVS
Sbjct: 1 MTLENIISKIKEQLKDGIYPGASLALYQAGQWQEFYFGLADPQEGKATQAGLVYDLASVS 60
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGT+ FL+E G+L++D + + P D+T+RQLLTH + LDPFIPNR+ LTA
Sbjct: 61 KVVGVGTLAAFLYEQGKLELDLPLQHYYPAFHQEDVTLRQLLTHTSGLDPFIPNREQLTA 120
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
P+LKEA+ HL F Y+DV+FLLLGF+LE IF Q LD I + Q+++PWG+TET FG
Sbjct: 121 PKLKEALNHLTVLEDKTFRYTDVNFLLLGFMLEEIFGQALDQIFQSQIFQPWGLTETCFG 180
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
PV AVPTVRGV+ G VHDPKAR+LG H+GSAGLFST++DL+IFLEHYL DDFA +L QN
Sbjct: 181 PVPGAVPTVRGVKDGQVHDPKARVLGIHSGSAGLFSTLRDLEIFLEHYLQDDFAANLTQN 240
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
FS K RSLAWNLEG WLDHTGYTGTFIM+NR++Q+A IFLSNRTYEKDERAQWILDR
Sbjct: 241 FSKEPGKRRSLAWNLEGSWLDHTGYTGTFIMYNRKEQKAAIFLSNRTYEKDERAQWILDR 300
Query: 301 NQVMNLIRKE 310
NQ+M+LIR+E
Sbjct: 301 NQLMDLIRRE 310
>gi|157075720|gb|ABV10403.1| beta-lactamase-like or putative esterase [Streptococcus gordonii
str. Challis substr. CH1]
Length = 311
Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats.
Identities = 201/310 (64%), Positives = 242/310 (78%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
M KI +KI+EQI IYPGAS A ++ QW FY G +DP+ T+AGLVYDLASVS
Sbjct: 1 MTKQKIFEKIQEQIRQEIYPGASLALYQAGQWQGFYFGWADPQESKATQAGLVYDLASVS 60
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGT+ TFL++ G+L++D + + P D+T+RQLLTH + LDPFIPNRD LTA
Sbjct: 61 KVVGVGTLATFLYKQGKLELDLPLQHYYPAFHREDVTVRQLLTHTSGLDPFIPNRDQLTA 120
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
PELKEA+ HL F Y+DV+FLLLGF+LE I+ Q L+ I +DQ+++PWG+ ET FG
Sbjct: 121 PELKEALNHLTVLEDKTFRYTDVNFLLLGFMLEEIYGQALNQIFQDQIFQPWGLAETGFG 180
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
PV AVPTVRGV+ G VHDPKA +LG HAGSAGLFST+KDL+IFLEHYL DDFA +L +N
Sbjct: 181 PVSGAVPTVRGVKDGQVHDPKAHVLGVHAGSAGLFSTLKDLEIFLEHYLQDDFAANLTRN 240
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
FS K RSLAWNLE WLDHTGYTGTFIM+NR++Q+A IFLSNRTYEKDERAQWILDR
Sbjct: 241 FSRETGKRRSLAWNLEDGWLDHTGYTGTFIMYNRKEQKAVIFLSNRTYEKDERAQWILDR 300
Query: 301 NQVMNLIRKE 310
NQ+MNLI+ E
Sbjct: 301 NQLMNLIKTE 310
>gi|81096183|ref|ZP_00874532.1| Beta-lactamase [Streptococcus suis 89/1591]
gi|80977805|gb|EAP41339.1| Beta-lactamase [Streptococcus suis 89/1591]
Length = 315
Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats.
Identities = 184/304 (60%), Positives = 228/304 (75%), Gaps = 2/304 (0%)
Query: 6 IIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGV 65
I+ KI EQI G+YPGAS A F + QW E+YLG D EAGL YDLASVSKVVGV
Sbjct: 5 ILDKISEQIGQGVYPGASLALFSEGQWQEYYLGTQDGH--TPVEAGLTYDLASVSKVVGV 62
Query: 66 GTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKE 125
GT+ TFL G L++DR + + P +TIRQLLTH + +DPFIPNRD L A +LKE
Sbjct: 63 GTLATFLVNSGALELDRTLQSYYPAFVDSQVTIRQLLTHTSGIDPFIPNRDSLDADQLKE 122
Query: 126 AMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELA 185
A+ + + FLY+D++FLLLGF+LE I LD ++ V +P+GM++T FGPV A
Sbjct: 123 AILKITVTDKKDFLYTDINFLLLGFLLEEIGGDRLDQLISRDVLEPFGMSQTSFGPVSQA 182
Query: 186 VPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLD 245
VPTVRGV+AG+VHDPKAR+LG HAGSAGLFST+KDL+IFLE YL +DFA +L Q++ D
Sbjct: 183 VPTVRGVKAGLVHDPKARVLGLHAGSAGLFSTVKDLEIFLERYLTEDFAANLTQDYGFDD 242
Query: 246 DKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMN 305
++RSLAW+ +GDWL HTGYTGTFIM+NR Q+A IFLSNRT++KDERAQW LDRNQVM
Sbjct: 243 KRKRSLAWDKKGDWLSHTGYTGTFIMYNRPLQKAEIFLSNRTFDKDERAQWKLDRNQVMA 302
Query: 306 LIRK 309
LIR+
Sbjct: 303 LIRQ 306
>gi|24378893|ref|NP_720848.1| putative secreted esterase [Streptococcus mutans UA159]
gi|24376775|gb|AAN58154.1|AE014887_2 putative secreted esterase [Streptococcus mutans UA159]
Length = 316
Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats.
Identities = 172/308 (55%), Positives = 224/308 (72%), Gaps = 4/308 (1%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
M + KII KI +QI +Y GAS A + D QW EFYLG++ P H +T+AGLVYDLASVS
Sbjct: 1 MTYQKIIDKINQQISQHVYLGASLALY-DGQWQEFYLGETIPHH--KTKAGLVYDLASVS 57
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGTV FL + L +D + + P +TIRQLLTH + +DPFIPNR+ L
Sbjct: 58 KVVGVGTVIIFLLQANHLKLDEPLQAYYPNFHDSSVTIRQLLTHTSGIDPFIPNRNKLDF 117
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
LK+A+ H+ +F Y+D++F+LLGF+LE ++Q LD I+K+ V KP+GM +T FG
Sbjct: 118 AALKQAINHIEVTKTKSFHYTDLNFILLGFLLEEFYDQSLDRIIKEHVLKPFGMEKTSFG 177
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
PV+ AVPT + + G VHDPKA++LG H GSAGLFS ++DL+ F+ HYL+D FA+ L Q+
Sbjct: 178 PVKRAVPTGKTIPIGRVHDPKAQVLGIHTGSAGLFSNLEDLKCFVNHYLSDAFAKPLTQD 237
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
F+ DK RSLAW+L GDWL HTGYTGTFI+ N +KQ A IFLSNRTYEKDER+QWILDR
Sbjct: 238 FA-YADKTRSLAWDLTGDWLFHTGYTGTFILLNIKKQSAAIFLSNRTYEKDERSQWILDR 296
Query: 301 NQVMNLIR 308
N ++ +I+
Sbjct: 297 NDLIEVIK 304
>gi|55821643|ref|YP_140085.1| hypothetical protein stu1667 [Streptococcus thermophilus LMG 18311]
gi|55737628|gb|AAV61270.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
Length = 323
Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats.
Identities = 158/301 (52%), Positives = 217/301 (72%), Gaps = 3/301 (0%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVC 69
I + I+A I+PGAS A + W E+Y G D ++ + + L YDLASVSKVVGVGT+C
Sbjct: 16 ITDYIKADIFPGASLALYDGKNWQEYYCGTQDGKNPVIPD--LTYDLASVSKVVGVGTLC 73
Query: 70 TFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAMFH 129
F + G+LD+D + PE +T+RQLL+H++ +DPFIPNRD L L A+
Sbjct: 74 IFYLQSGKLDLDEKFSTYYPEVADKTLTLRQLLSHSSGIDPFIPNRDELDQKGLIAAINA 133
Query: 130 LNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELAVPTV 189
+ +S FLY+D++F+LLG +LE++ Q LD + ++++P+GM +T+FGPV+LAVPTV
Sbjct: 134 IKVKSDKPFLYTDINFILLGLMLEKLSGQRLDRLFDSEIFQPFGMIDTQFGPVDLAVPTV 193
Query: 190 RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLDDKER 249
G+ G VHDPKAR+L H GSAGLFST+KDL+IF+ HYL DDFA++L QN S KER
Sbjct: 194 EGIPGGTVHDPKARVLKEHTGSAGLFSTLKDLEIFVNHYLKDDFAKNLTQNISQ-SKKER 252
Query: 250 SLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMNLIRK 309
S+AW+L+GDW+ HTGYTGTF++ N +Q A IFLSNRTY KDERAQWI DR+ ++ +++K
Sbjct: 253 SVAWDLQGDWIIHTGYTGTFVLINIPRQRAGIFLSNRTYYKDERAQWIKDRDALIEIMKK 312
Query: 310 E 310
E
Sbjct: 313 E 313
>gi|116628352|ref|YP_820971.1| Beta-lactamase class C and other penicillin binding protein
[Streptococcus thermophilus LMD-9]
gi|116101629|gb|ABJ66775.1| Beta-lactamase class C and other penicillin binding protein
[Streptococcus thermophilus LMD-9]
Length = 318
Score = 328 bits (840), Expect = 3e-88, Method: Composition-based stats.
Identities = 158/301 (52%), Positives = 217/301 (72%), Gaps = 3/301 (0%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVC 69
I + I+A I+PGAS A + W E+Y G D ++ + + L YDLASVSKVVGVGT+C
Sbjct: 11 ITDYIKADIFPGASLALYDGKNWQEYYCGTQDGKNPVIPD--LTYDLASVSKVVGVGTLC 68
Query: 70 TFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAMFH 129
F + G+LD+D + PE +T+RQLL+H++ +DPFIPNRD L L A+
Sbjct: 69 IFYLQSGKLDLDEKFSTYYPEVADKTLTLRQLLSHSSGIDPFIPNRDELDQKGLIAAINA 128
Query: 130 LNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELAVPTV 189
+ +S FLY+D++F+LLG +LE++ Q LD + ++++P+GM +T+FGPV+LAVPTV
Sbjct: 129 IKVKSDKPFLYTDINFILLGLMLEKLSGQRLDRLFDSEIFQPFGMIDTQFGPVDLAVPTV 188
Query: 190 RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLDDKER 249
G+ G VHDPKAR+L H GSAGLFST+KDL+IF+ HYL DDFA++L QN S KER
Sbjct: 189 EGIPGGTVHDPKARVLKEHTGSAGLFSTLKDLEIFVNHYLKDDFAKNLTQNISQ-SKKER 247
Query: 250 SLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMNLIRK 309
S+AW+L+GDW+ HTGYTGTF++ N +Q A IFLSNRTY KDERAQWI DR+ ++ +++K
Sbjct: 248 SVAWDLQGDWIIHTGYTGTFVLINIPRQRAGIFLSNRTYYKDERAQWIKDRDALIEIMKK 307
Query: 310 E 310
E
Sbjct: 308 E 308
>gi|55823570|ref|YP_142011.1| hypothetical protein str1667 [Streptococcus thermophilus CNRZ1066]
gi|55739555|gb|AAV63196.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
Length = 323
Score = 327 bits (839), Expect = 5e-88, Method: Composition-based stats.
Identities = 157/301 (52%), Positives = 217/301 (72%), Gaps = 3/301 (0%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVC 69
I + I+A I+PGAS A + W E+Y G D ++ + + L YDLASVSKVVG+GT+C
Sbjct: 16 ITDYIKADIFPGASLALYDGKNWQEYYCGTQDGKNPVIPD--LTYDLASVSKVVGLGTLC 73
Query: 70 TFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAMFH 129
F + G+LD+D + PE +T+RQLL+H++ +DPFIPNRD L L A+
Sbjct: 74 IFYLQSGKLDLDEKFSTYYPEVADKTLTLRQLLSHSSGIDPFIPNRDELDQKGLIAAINA 133
Query: 130 LNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELAVPTV 189
+ +S FLY+D++F+LLG +LE++ Q LD + ++++P+GM +T+FGPV+LAVPTV
Sbjct: 134 IKVKSDKPFLYTDINFILLGLMLEKLSGQRLDRLFDSEIFQPFGMIDTQFGPVDLAVPTV 193
Query: 190 RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLDDKER 249
G+ G VHDPKAR+L H GSAGLFST+KDL+IF+ HYL DDFA++L QN S KER
Sbjct: 194 EGIPGGTVHDPKARVLKEHTGSAGLFSTLKDLEIFVNHYLKDDFAKNLTQNISQ-SKKER 252
Query: 250 SLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMNLIRK 309
S+AW+L+GDW+ HTGYTGTF++ N +Q A IFLSNRTY KDERAQWI DR+ ++ +++K
Sbjct: 253 SVAWDLQGDWIIHTGYTGTFVLINIPRQRAGIFLSNRTYYKDERAQWIKDRDALIEIMKK 312
Query: 310 E 310
E
Sbjct: 313 E 313
>gi|148984789|ref|ZP_01818042.1| hypothetical protein CGSSp3BS71_09141 [Streptococcus pneumoniae
SP3-BS71]
gi|147922811|gb|EDK73927.1| hypothetical protein CGSSp3BS71_09141 [Streptococcus pneumoniae
SP3-BS71]
Length = 152
Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats.
Identities = 151/152 (99%), Positives = 152/152 (100%)
Query: 160 LDVILKDQVWKPWGMTETKFGPVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIK 219
+DVILKDQVWKPWGMTETKFGPVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIK
Sbjct: 1 MDVILKDQVWKPWGMTETKFGPVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIK 60
Query: 220 DLQIFLEHYLADDFARDLNQNFSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEA 279
DLQIFLEHYLADDFARDLNQNFSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEA
Sbjct: 61 DLQIFLEHYLADDFARDLNQNFSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEA 120
Query: 280 TIFLSNRTYEKDERAQWILDRNQVMNLIRKEE 311
TIFLSNRTYEKDERAQWILDRNQVMNLIRKEE
Sbjct: 121 TIFLSNRTYEKDERAQWILDRNQVMNLIRKEE 152
>gi|71904220|ref|YP_281023.1| penicillin-binding protein [Streptococcus pyogenes MGAS6180]
gi|71803315|gb|AAX72668.1| penicillin-binding protein [Streptococcus pyogenes MGAS6180]
Length = 316
Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats.
Identities = 147/305 (48%), Positives = 210/305 (68%), Gaps = 3/305 (0%)
Query: 6 IIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGV 65
+IK IE + +Y GAS A F+ +W E+++G D + +A LVYDLASVSKVVGV
Sbjct: 9 VIKCIENHLHKKVYKGASLALFQSGRWQEYHIGTIDGRRPV--DANLVYDLASVSKVVGV 66
Query: 66 GTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKE 125
T+C L G L +D + + P +TIRQLLTH + LDP+IPNRD+L A +L++
Sbjct: 67 ATICNILLNNGTLALDDPLKAYYPSIVDATVTIRQLLTHTSGLDPYIPNRDVLNAQQLRK 126
Query: 126 AMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELA 185
A+ HL ++ F Y+DV+FLLLGF+LE +F++ LD I ++ P+GM T FGP A
Sbjct: 127 ALNHLTQKGNKNFYYTDVNFLLLGFMLEELFSESLDQIFDKTIFTPFGMYHTSFGPRPEA 186
Query: 186 VPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLD 245
VPT++GV G VHDPKA++L +H+GSAGLFST+ DL+ F HYL D F+ L +N+S
Sbjct: 187 VPTLKGVSDGEVHDPKAKILKKHSGSAGLFSTLADLESFSNHYLNDPFSDCLWRNYSQ-Q 245
Query: 246 DKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMN 305
ERSL WNL+GDW+ HTGYTG F+M N+++Q A IFL+NRTY++D++++W+ +R + N
Sbjct: 246 TIERSLGWNLDGDWISHTGYTGPFLMLNKKEQTAAIFLTNRTYDEDDKSKWLKERQLLYN 305
Query: 306 LIRKE 310
++ +
Sbjct: 306 ALKHD 310
>gi|146317855|ref|YP_001197567.1| Beta-lactamase class C and other penicillin binding proteins
[Streptococcus suis 05ZYH33]
gi|146320047|ref|YP_001199758.1| Beta-lactamase class C and other penicillin binding proteins
[Streptococcus suis 98HAH33]
gi|145688661|gb|ABP89167.1| Beta-lactamase class C and other penicillin binding proteins
[Streptococcus suis 05ZYH33]
gi|145690853|gb|ABP91358.1| Beta-lactamase class C and other penicillin binding proteins
[Streptococcus suis 98HAH33]
Length = 267
Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats.
Identities = 159/258 (61%), Positives = 200/258 (77%)
Query: 52 LVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPF 111
+ YDLASVSKVVGVGT+ TFL G L++DR + + P ++TIRQLLTH + +DPF
Sbjct: 1 MTYDLASVSKVVGVGTLATFLVNSGALELDRTLQSYYPAFADSEVTIRQLLTHTSGIDPF 60
Query: 112 IPNRDLLTAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKP 171
IPNRD L A +LKEA+ + + AFLY+D++FLLLGF+LE + LD ++ V +P
Sbjct: 61 IPNRDSLDADQLKEAILKIAVTDKKAFLYTDINFLLLGFLLEELGRDSLDQLISRDVLEP 120
Query: 172 WGMTETKFGPVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLAD 231
+GM T FGPV AVPTVRGV+AG+VHDPKAR+LG HAGSAGLFST+KDL+IFLE YL +
Sbjct: 121 FGMFRTSFGPVSQAVPTVRGVKAGVVHDPKARVLGLHAGSAGLFSTVKDLEIFLERYLTE 180
Query: 232 DFARDLNQNFSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKD 291
DFA +L Q++ D ++RSLAW+ +GDWL HTGYTGTFIM+NR Q+A IFLSNRT++KD
Sbjct: 181 DFAANLTQDYGFDDKRKRSLAWDKKGDWLSHTGYTGTFIMYNRPLQKAAIFLSNRTFDKD 240
Query: 292 ERAQWILDRNQVMNLIRK 309
ERAQW LDRNQVM LIR+
Sbjct: 241 ERAQWKLDRNQVMALIRQ 258
>gi|94989205|ref|YP_597306.1| beta-lactamase family protein [Streptococcus pyogenes MGAS9429]
gi|94993092|ref|YP_601191.1| Beta-lactamase family protein [Streptococcus pyogenes MGAS2096]
gi|94542713|gb|ABF32762.1| beta-lactamase family protein [Streptococcus pyogenes MGAS9429]
gi|94546600|gb|ABF36647.1| Beta-lactamase family protein [Streptococcus pyogenes MGAS2096]
Length = 316
Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats.
Identities = 147/305 (48%), Positives = 210/305 (68%), Gaps = 3/305 (0%)
Query: 6 IIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGV 65
+IK IE + +Y GAS A F+ +W E+++G D + +A LVYDLASVSKVVGV
Sbjct: 9 VIKCIENHLHKKVYKGASLALFQSGRWQEYHIGTIDGRRPV--DANLVYDLASVSKVVGV 66
Query: 66 GTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKE 125
T+C L G L +D + + P +TIRQLLTH + LDP+IPNRD+L A +L++
Sbjct: 67 ATICNILLNNGTLALDDPLKVYYPSIADTTVTIRQLLTHTSGLDPYIPNRDVLNAQQLRK 126
Query: 126 AMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELA 185
A+ HL ++ F Y+DV+FLLLGF+LE +F++ LD I ++ P+GM T FGP A
Sbjct: 127 ALNHLTQKENKNFYYTDVNFLLLGFMLEELFSESLDQIFDKTIFTPFGMYHTSFGPRPEA 186
Query: 186 VPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLD 245
VPT++GV G VHDPKA++L +H+GSAGLFST+ DL+ F HYL D F+ L +N+S
Sbjct: 187 VPTLKGVSDGEVHDPKAKILKKHSGSAGLFSTLADLESFSNHYLNDPFSDCLWRNYSQ-Q 245
Query: 246 DKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMN 305
ERSL WNL+GDW+ HTGYTG F+M N+++Q A IFL+NRTY++D++++W+ +R + N
Sbjct: 246 TSERSLGWNLDGDWISHTGYTGPFLMLNKKEQTAAIFLTNRTYDEDDKSKWLKERQLLYN 305
Query: 306 LIRKE 310
++ +
Sbjct: 306 ALKHD 310
>gi|94995025|ref|YP_603123.1| Beta-lactamase family protein [Streptococcus pyogenes MGAS10750]
gi|94548533|gb|ABF38579.1| Beta-lactamase family protein [Streptococcus pyogenes MGAS10750]
Length = 316
Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats.
Identities = 147/305 (48%), Positives = 210/305 (68%), Gaps = 3/305 (0%)
Query: 6 IIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGV 65
+IK IE + +Y GAS A F+ +W E+++G D + +A LVYDLASVSKVVGV
Sbjct: 9 VIKCIENHLHKKVYKGASLALFQSGRWQEYHIGTIDGRRPV--DANLVYDLASVSKVVGV 66
Query: 66 GTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKE 125
T+C L G L +D + + P +TIRQLLTH + LDP+IPNRD+L A +L++
Sbjct: 67 ATICNILLNNGTLALDDPLKAYYPSIADATVTIRQLLTHTSGLDPYIPNRDVLNAQQLRK 126
Query: 126 AMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELA 185
A+ HL ++ F Y+DV+FLLLGF+LE +F++ LD I ++ P+GM T FGP A
Sbjct: 127 ALNHLTQKENKNFYYTDVNFLLLGFMLEELFSESLDQIFDKTIFTPFGMYHTSFGPRPEA 186
Query: 186 VPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLD 245
VPT++GV G VHDPKA++L +H+GSAGLFST+ DL+ F HYL D F+ L +N+S
Sbjct: 187 VPTLKGVSDGEVHDPKAKILKKHSGSAGLFSTLADLESFSNHYLNDPFSDCLWRNYSQ-Q 245
Query: 246 DKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMN 305
ERSL WNL+GDW+ HTGYTG F+M N+++Q A IFL+NRTY++D++++W+ +R + N
Sbjct: 246 TIERSLGWNLDGDWISHTGYTGPFLMLNKKEQTAAIFLTNRTYDEDDKSKWLKERQLLYN 305
Query: 306 LIRKE 310
++ +
Sbjct: 306 ALKHD 310
>gi|15675673|ref|NP_269847.1| putative esterase [Streptococcus pyogenes M1 GAS]
gi|21911133|ref|NP_665401.1| putative esterase [Streptococcus pyogenes MGAS315]
gi|28895182|ref|NP_801532.1| putative esterase [Streptococcus pyogenes SSI-1]
gi|71911383|ref|YP_282933.1| penicillin-binding protein [Streptococcus pyogenes MGAS5005]
gi|13622887|gb|AAK34568.1| putative esterase [Streptococcus pyogenes M1 GAS]
gi|21905344|gb|AAM80204.1| putative esterase [Streptococcus pyogenes MGAS315]
gi|28810427|dbj|BAC63365.1| putative esterase [Streptococcus pyogenes SSI-1]
gi|71854165|gb|AAZ52188.1| penicillin-binding protein [Streptococcus pyogenes MGAS5005]
Length = 316
Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats.
Identities = 147/305 (48%), Positives = 210/305 (68%), Gaps = 3/305 (0%)
Query: 6 IIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGV 65
+IK IE + +Y GAS A F+ +W E+++G D + +A LVYDLASVSKVVGV
Sbjct: 9 VIKCIENHLHKKVYKGASLALFQSGRWQEYHIGTIDGRRPV--DANLVYDLASVSKVVGV 66
Query: 66 GTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKE 125
T+C L G L +D + + P +TIRQLLTH + LDP+IPNRD+L A +L++
Sbjct: 67 ATICNILLNNGTLALDDPLKVYYPSIADATVTIRQLLTHTSGLDPYIPNRDVLNAQQLRK 126
Query: 126 AMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELA 185
A+ HL ++ F Y+DV+FLLLGF+LE +F++ LD I ++ P+GM T FGP A
Sbjct: 127 ALNHLTQKENKNFYYTDVNFLLLGFMLEELFSESLDQIFDKTIFTPFGMYHTSFGPRPEA 186
Query: 186 VPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLD 245
VPT++GV G VHDPKA++L +H+GSAGLFST+ DL+ F HYL D F+ L +N+S
Sbjct: 187 VPTLKGVSDGEVHDPKAKILKKHSGSAGLFSTLADLESFSNHYLNDPFSDCLWRNYSQ-Q 245
Query: 246 DKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMN 305
ERSL WNL+GDW+ HTGYTG F+M N+++Q A IFL+NRTY++D++++W+ +R + N
Sbjct: 246 TIERSLGWNLDGDWISHTGYTGPFLMLNKKEQTAAIFLTNRTYDEDDKSKWLKERQLLYN 305
Query: 306 LIRKE 310
++ +
Sbjct: 306 ALKHD 310
>gi|19746779|ref|NP_607915.1| putative esterase [Streptococcus pyogenes MGAS8232]
gi|50914928|ref|YP_060900.1| Penicillin-binding protein [Streptococcus pyogenes MGAS10394]
gi|94991146|ref|YP_599246.1| Beta-lactamase family protein [Streptococcus pyogenes MGAS10270]
gi|139473156|ref|YP_001127871.1| putative beta-lactamase [Streptococcus pyogenes str. Manfredo]
gi|19749012|gb|AAL98414.1| putative esterase [Streptococcus pyogenes MGAS8232]
gi|50904002|gb|AAT87717.1| Penicillin-binding protein [Streptococcus pyogenes MGAS10394]
gi|94544654|gb|ABF34702.1| Beta-lactamase family protein [Streptococcus pyogenes MGAS10270]
gi|134271402|emb|CAM29622.1| putative beta-lactamase [Streptococcus pyogenes str. Manfredo]
Length = 316
Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats.
Identities = 147/305 (48%), Positives = 210/305 (68%), Gaps = 3/305 (0%)
Query: 6 IIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGV 65
+IK IE + +Y GAS A F+ +W E+++G D + +A LVYDLASVSKVVGV
Sbjct: 9 VIKCIENHLHKKVYKGASLALFQSGRWQEYHIGTIDGRRPV--DANLVYDLASVSKVVGV 66
Query: 66 GTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKE 125
T+C L G L +D + + P +TIRQLLTH + LDP+IPNRD+L A +L++
Sbjct: 67 ATICNILLNNGTLALDDPLKVYYPSIADTTVTIRQLLTHTSGLDPYIPNRDVLNAQQLRK 126
Query: 126 AMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELA 185
A+ HL ++ F Y+DV+FLLLGF+LE +F++ LD I ++ P+GM T FGP A
Sbjct: 127 ALNHLTQKENKNFYYTDVNFLLLGFMLEELFSESLDQIFDKTIFTPFGMYHTSFGPRPEA 186
Query: 186 VPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLD 245
VPT++GV G VHDPKA++L +H+GSAGLFST+ DL+ F HYL D F+ L +N+S
Sbjct: 187 VPTLKGVSDGEVHDPKAKILKKHSGSAGLFSTLADLESFSNHYLNDPFSDCLWRNYSQ-Q 245
Query: 246 DKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMN 305
ERSL WNL+GDW+ HTGYTG F+M N+++Q A IFL+NRTY++D++++W+ +R + N
Sbjct: 246 TIERSLGWNLDGDWISHTGYTGPFLMLNKKEQTAAIFLTNRTYDEDDKSKWLKERQLLYN 305
Query: 306 LIRKE 310
++ +
Sbjct: 306 ALKHD 310
>gi|25011813|ref|NP_736208.1| hypothetical protein gbs1774 [Streptococcus agalactiae NEM316]
gi|76787423|ref|YP_330337.1| beta-lactamase, putative [Streptococcus agalactiae A909]
gi|24413354|emb|CAD47433.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562480|gb|ABA45064.1| beta-lactamase, putative [Streptococcus agalactiae A909]
Length = 309
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 155/307 (50%), Positives = 207/307 (67%), Gaps = 4/307 (1%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
+K +++ I+EQI+ +Y GAS A +++ +W E YLG D + +AGLVYDLASVS
Sbjct: 2 IKTNTVLELIKEQIKDNLYHGASLAIYENGEWHEHYLGTIDGNE--KVKAGLVYDLASVS 59
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGT+ L G +DID+ + + P + +T+RQL TH++ +DPFIPNRD L A
Sbjct: 60 KVVGVGTLLAKLVYQGTIDIDKPLRYYYPTFHHQTLTVRQLATHSSGIDPFIPNRDQLNA 119
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
+LK+A+ H+ +F Y+D++FLLLGF+LE + LD + K ++ P+ M ET FG
Sbjct: 120 TQLKDAINHIKVLEDKSFKYTDINFLLLGFMLEEVLGDSLDKLFKRYIFTPFQMKETSFG 179
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
P AVPTV G+ GIVHDPKA++LG+H GSAGLFSTI DLQ F HYL DDFA+ L N
Sbjct: 180 PRVEAVPTVAGINDGIVHDPKAKVLGKHTGSAGLFSTIDDLQRFSIHYLKDDFAKPLWNN 239
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
+S K RSLAW+++ DW++HTGYTG FI N QKQ A IFL+NRT+ D+R WI R
Sbjct: 240 YSL--SKSRSLAWDIDKDWINHTGYTGPFIALNYQKQAAAIFLTNRTFSYDDRPLWIKKR 297
Query: 301 NQVMNLI 307
V I
Sbjct: 298 RHVQEAI 304
>gi|76798403|ref|ZP_00780644.1| beta-lactamase [Streptococcus agalactiae 18RS21]
gi|77405962|ref|ZP_00783041.1| beta-lactamase [Streptococcus agalactiae H36B]
gi|77408815|ref|ZP_00785544.1| beta-lactamase [Streptococcus agalactiae COH1]
gi|77413670|ref|ZP_00789854.1| beta-lactamase [Streptococcus agalactiae 515]
gi|76586235|gb|EAO62752.1| beta-lactamase [Streptococcus agalactiae 18RS21]
gi|77160270|gb|EAO71397.1| beta-lactamase [Streptococcus agalactiae 515]
gi|77172596|gb|EAO75736.1| beta-lactamase [Streptococcus agalactiae COH1]
gi|77175414|gb|EAO78204.1| beta-lactamase [Streptococcus agalactiae H36B]
Length = 314
Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats.
Identities = 155/307 (50%), Positives = 207/307 (67%), Gaps = 4/307 (1%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
+K +++ I+EQI+ +Y GAS A +++ +W E YLG D + +AGLVYDLASVS
Sbjct: 7 IKTNTVLELIKEQIKDNLYHGASLAIYENGEWHEHYLGTIDGNE--KVKAGLVYDLASVS 64
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGT+ L G +DID+ + + P + +T+RQL TH++ +DPFIPNRD L A
Sbjct: 65 KVVGVGTLLAKLVYQGTIDIDKPLRYYYPTFHHQTLTVRQLATHSSGIDPFIPNRDQLNA 124
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
+LK+A+ H+ +F Y+D++FLLLGF+LE + LD + K ++ P+ M ET FG
Sbjct: 125 TQLKDAINHIKVLEDKSFKYTDINFLLLGFMLEEVLGDSLDKLFKRYIFTPFQMKETSFG 184
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
P AVPTV G+ GIVHDPKA++LG+H GSAGLFSTI DLQ F HYL DDFA+ L N
Sbjct: 185 PRVEAVPTVAGINDGIVHDPKAKVLGKHTGSAGLFSTIDDLQRFSIHYLKDDFAKPLWNN 244
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
+S K RSLAW+++ DW++HTGYTG FI N QKQ A IFL+NRT+ D+R WI R
Sbjct: 245 YSL--SKSRSLAWDIDKDWINHTGYTGPFIALNYQKQAAAIFLTNRTFSYDDRPLWIKKR 302
Query: 301 NQVMNLI 307
V I
Sbjct: 303 RHVQEAI 309
>gi|22537868|ref|NP_688719.1| hypothetical protein SAG1729 [Streptococcus agalactiae 2603V/R]
gi|22534764|gb|AAN00592.1|AE014270_10 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
Length = 309
Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats.
Identities = 155/307 (50%), Positives = 207/307 (67%), Gaps = 4/307 (1%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
+K +++ I+EQI+ +Y GAS A +++ +W E YLG D + +AGLVYDLASVS
Sbjct: 2 IKTNTVLELIKEQIKDNLYHGASLAIYENGEWHEHYLGTIDGNE--KVKAGLVYDLASVS 59
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGT+ L G +DID+ + + P + +T+RQL TH++ +DPFIPNRD L A
Sbjct: 60 KVVGVGTLLAKLVYQGTIDIDKPLRYYYPTFHHQTLTVRQLATHSSGIDPFIPNRDQLNA 119
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
+LK+A+ H+ +F Y+D++FLLLGF+LE + LD + K ++ P+ M ET FG
Sbjct: 120 TQLKDAINHIKVLEDKSFKYTDINFLLLGFMLEEVLGDSLDKLFKRYIFTPFQMKETSFG 179
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
P AVPTV G+ GIVHDPKA++LG+H GSAGLFSTI DLQ F HYL DDFA+ L N
Sbjct: 180 PRVEAVPTVVGINDGIVHDPKAKVLGKHTGSAGLFSTIDDLQRFSIHYLKDDFAKPLWNN 239
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
+S K RSLAW+++ DW++HTGYTG FI N QKQ A IFL+NRT+ D+R WI R
Sbjct: 240 YSL--SKSRSLAWDIDKDWINHTGYTGPFIALNYQKQAAAIFLTNRTFSYDDRPLWIKKR 297
Query: 301 NQVMNLI 307
V I
Sbjct: 298 RHVQEAI 304
>gi|77412148|ref|ZP_00788471.1| beta-lactamase [Streptococcus agalactiae CJB111]
gi|77161808|gb|EAO72796.1| beta-lactamase [Streptococcus agalactiae CJB111]
Length = 314
Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats.
Identities = 154/307 (50%), Positives = 207/307 (67%), Gaps = 4/307 (1%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
+K +++ I+EQI+ +Y GAS A +++ +W E YLG D + +AGLVYDLASVS
Sbjct: 7 IKTNTVLELIKEQIKDNLYHGASLAIYENGEWHEHYLGTIDGNE--KVKAGLVYDLASVS 64
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGT+ L G +DID+ + + P + +T+RQL TH++ +DPFIPNRD L A
Sbjct: 65 KVVGVGTLLAKLVYHGTIDIDKPLRYYYPRFHHQTLTVRQLATHSSGIDPFIPNRDQLNA 124
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
+LK+A+ H+ +F Y+D++FLLLGF+LE + LD + K ++ P+ M ET FG
Sbjct: 125 TQLKDAINHIKVLEDKSFKYTDINFLLLGFMLEEVLGDGLDKLFKRYIFTPFQMKETSFG 184
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQN 240
P AVPTV G+ GIVHDPKA++LG+H GSAGLFSTI DLQ F HYL DDFA+ L N
Sbjct: 185 PRVEAVPTVAGINDGIVHDPKAKVLGKHTGSAGLFSTIDDLQRFSIHYLKDDFAKPLWNN 244
Query: 241 FSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
+S K RSLAW+++ DW++HTGYTG FI N QKQ A IFL+NRT+ D+R WI R
Sbjct: 245 YSL--SKSRSLAWDIDKDWINHTGYTGPFIALNYQKQAAAIFLTNRTFSYDDRPLWIEKR 302
Query: 301 NQVMNLI 307
+ I
Sbjct: 303 RHIQEAI 309
>gi|148984790|ref|ZP_01818043.1| hypothetical protein CGSSp3BS71_09146 [Streptococcus pneumoniae
SP3-BS71]
gi|147922812|gb|EDK73928.1| hypothetical protein CGSSp3BS71_09146 [Streptococcus pneumoniae
SP3-BS71]
Length = 161
Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats.
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS
Sbjct: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA
Sbjct: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHF 145
PELKEAMFHLNRRSQPAFLYSDVHF
Sbjct: 121 PELKEAMFHLNRRSQPAFLYSDVHF 145
>gi|15674027|ref|NP_268202.1| hypothetical protein L114054 [Lactococcus lactis subsp. lactis
Il1403]
gi|12725096|gb|AAK06143.1|AE006435_1 HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis Il1403]
Length = 328
Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 133/308 (43%), Positives = 197/308 (63%), Gaps = 7/308 (2%)
Query: 5 KIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSD--PEHGLQTEAGLVYDLASVSKV 62
+ +K IE+ IE ++PG +FA + + E+ LG S P+ ++ G +DLAS++KV
Sbjct: 6 EFLKIIEDYIERDVFPGVNFAIIEGEKVNEYLLGNSAIYPK-TIKLTQGKKWDLASLTKV 64
Query: 63 VGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPE 122
VG GT L G+L+ID + + + +++RQLLTH + +DPFI NRD L A E
Sbjct: 65 VGTGTAVINLVLAGKLEIDAPLQKYYSKFTDRSVSLRQLLTHTSGIDPFIKNRDKLNAKE 124
Query: 123 LKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPV 182
L EA+ + F Y+D++F+LLGF+LE + + LD I QV++ W MT+T FGPV
Sbjct: 125 LTEAINQIKITDNKTFKYTDINFILLGFLLEEYYGESLDKIFYKQVFEDWKMTDTSFGPV 184
Query: 183 ELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFS 242
E AVPT + + G VHDPKA++L H GSAGLFST+ DL +F + Y ++ L +N++
Sbjct: 185 ENAVPTSQNIPVGTVHDPKAQVLKNHCGSAGLFSTMSDLILFSQAYFQEEKYLKLTKNYA 244
Query: 243 PLDDKERSLAWNLEG---DWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILD 299
DK+RSLAW+L G DWL HTGYTGTF++ N + ++A +FLSNR + KD R +WI +
Sbjct: 245 D-GDKKRSLAWDLLGPNDDWLLHTGYTGTFLLINPRIKKAVVFLSNRVHLKDNREKWIEE 303
Query: 300 RNQVMNLI 307
R+ ++ +
Sbjct: 304 RDFLIKFL 311
>gi|125625083|ref|YP_001033566.1| hypothetical protein llmg_2322 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124493891|emb|CAL98885.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
Length = 318
Score = 237 bits (604), Expect = 7e-61, Method: Composition-based stats.
Identities = 124/308 (40%), Positives = 196/308 (63%), Gaps = 7/308 (2%)
Query: 5 KIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSD--PEHGLQTEAGLVYDLASVSKV 62
+ + IE+ +E ++PG +FA + + +E+ G++ PE + G +DLAS++KV
Sbjct: 6 EFLAMIEDYLERDVFPGVNFAILEGEEVSEYLFGKAALIPE-PIALTPGKKWDLASLTKV 64
Query: 63 VGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPE 122
+G GT L G+L++D + + + +++RQLLTH + +DP+IPNRD L E
Sbjct: 65 IGTGTAVIDLVLAGKLELDAPLQKYYAKFTDSTVSLRQLLTHTSGIDPYIPNRDKLGFFE 124
Query: 123 LKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPV 182
L EA+ + +F Y+D++F+LLGF+LE + + LD I ++K WGM +T FGPV
Sbjct: 125 LTEAINQIRVTDDKSFKYTDINFILLGFLLEEYYGESLDHIFTKNIFKNWGMKQTSFGPV 184
Query: 183 ELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFS 242
E AVPT + + G VHDPKA++L H GSAGLFST+ D+ +F + Y ++ +L +N++
Sbjct: 185 ENAVPTSQNIPLGTVHDPKAQVLKNHCGSAGLFSTLSDMILFSQAYFREEKYLELLKNYA 244
Query: 243 PLDDKERSLAWNL---EGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILD 299
K+RSLAW+L DWL HTGYTGTFI+ N + ++A +FLSNR + KD R +WI +
Sbjct: 245 D-GAKKRSLAWDLPAENNDWLLHTGYTGTFILINPRIKKAVVFLSNRVHLKDNREKWIEE 303
Query: 300 RNQVMNLI 307
R++++ +
Sbjct: 304 RDRLIKFL 311
>gi|116512992|ref|YP_811899.1| Beta-lactamase class C related penicillin binding protein
[Lactococcus lactis subsp. cremoris SK11]
gi|116108646|gb|ABJ73786.1| Beta-lactamase class C related penicillin binding protein
[Lactococcus lactis subsp. cremoris SK11]
Length = 318
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 124/308 (40%), Positives = 195/308 (63%), Gaps = 7/308 (2%)
Query: 5 KIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSD--PEHGLQTEAGLVYDLASVSKV 62
+ + IE+ +E ++PG +FA + + +E+ G++ PE + G +DLAS++KV
Sbjct: 6 EFLAMIEDYLERDVFPGVNFAILEGEEVSEYLFGKAALIPE-PIALTPGKKWDLASLTKV 64
Query: 63 VGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPE 122
+G GT L G+L++D + + + +++RQLLTH + +DP+IPNRD L E
Sbjct: 65 IGTGTAVIDLVLAGKLELDAPLQKYYAKFTDSTVSLRQLLTHTSGIDPYIPNRDKLGFFE 124
Query: 123 LKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPV 182
L EA+ + +F Y+D++F+LLGF+LE +++ LD I ++K W M +T FG V
Sbjct: 125 LTEAINQIRVTDDKSFKYTDINFILLGFLLEEYYDESLDYIFNKNIFKNWEMKQTSFGSV 184
Query: 183 ELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFS 242
E AVPT + + G VHDPKA++L H GSAGLFST+ D+ +F + Y +D +L +N++
Sbjct: 185 ENAVPTSQNIPLGTVHDPKAQVLKNHCGSAGLFSTLSDMILFSQAYFREDKYLELLKNYA 244
Query: 243 PLDDKERSLAWNL---EGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILD 299
KERSLAW+L DWL HTGYTGTFI+ N + ++A +FLSNR + KD R +WI +
Sbjct: 245 D-GAKERSLAWDLPAENNDWLLHTGYTGTFILINPRIKKAVVFLSNRVHLKDNREKWIEE 303
Query: 300 RNQVMNLI 307
R++++ +
Sbjct: 304 RDRLIKFL 311
>gi|29377077|ref|NP_816231.1| hypothetical protein EF2590 [Enterococcus faecalis V583]
gi|29344543|gb|AAO82301.1| conserved hypothetical protein [Enterococcus faecalis V583]
Length = 347
Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats.
Identities = 130/334 (38%), Positives = 184/334 (55%), Gaps = 35/334 (10%)
Query: 9 KIEEQIEAGIYPGASFAYFK-----DNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVV 63
KI++ ++ G++ GASF + + N W L Q P Q + +++D+AS++KVV
Sbjct: 8 KIQKMMKKGVFSGASFCFIEGEKEESNCWG---LAQVKPTKE-QLTSAMLFDVASLTKVV 63
Query: 64 GVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPEL 123
G TV L E G++ +D+ + + P +ITIR LLTH DL +IPNRD L A EL
Sbjct: 64 GTTTVILQLVEEGKIILDQSLQTYYPSFQDSNITIRHLLTHTADLQGYIPNRDQLNAQEL 123
Query: 124 KEAM---FHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
K+A FH + +Y+D +LLGF+LE +F Q + IL ++V P GM E+ F
Sbjct: 124 KDAYNHSFHAGKAIGKKVVYTDAGTILLGFMLEEMFQQSMIEILSERVLLPLGMNESTFL 183
Query: 181 PVEL--AVPT----VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL----- 229
P VPT RG+ G HDPKA +L HAG+AGLFS + DL F+ YL
Sbjct: 184 PKNPLNCVPTELHEQRGLIRGATHDPKAFVLREHAGNAGLFSNVYDLTKFVRMYLNRGSY 243
Query: 230 -ADDFARD-----LNQNFSPLDDKERSLAWNLEGD------WLDHTGYTGTFIMWNRQKQ 277
F + L N P DK RSL W+ + D L HTGYTGTF++ + Q+Q
Sbjct: 244 HNHQFLKKETIDLLLVNQVPAADKPRSLGWDFKYDVATQRPLLFHTGYTGTFLLIDVQQQ 303
Query: 278 EATIFLSNRTYEKDERAQWILDRNQVMNLIRKEE 311
A IFLSNR + +D R +I +R+Q++ KE+
Sbjct: 304 SALIFLSNRVHPEDHRNTYIEERDQLLATYLKEK 337
>gi|69245317|ref|ZP_00603361.1| Beta-lactamase [Enterococcus faecium DO]
gi|68195847|gb|EAN10282.1| Beta-lactamase [Enterococcus faecium DO]
Length = 341
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 128/333 (38%), Positives = 187/333 (56%), Gaps = 32/333 (9%)
Query: 6 IIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLG--QSDPEHGLQTEAGLVYDLASVSKVV 63
I+KK+EE G YPG + A+ K+NQ F G Q PE L TE L++D AS++KVV
Sbjct: 9 ILKKMEE----GFYPGVAVAFIKENQVETFTAGFAQVVPEKQLMTE-DLLFDAASLTKVV 63
Query: 64 GVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPEL 123
++ L E G++++D+ + +LPE + IT+R LLTH +D+ +IPNRD L+ EL
Sbjct: 64 ATTSLVLRLLEDGKIELDQPLHKYLPEFENQTITLRHLLTHTSDIKTWIPNRDKLSQEEL 123
Query: 124 KEAMFHLNRRSQ--PAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGP 181
A L Q Y+D +LLG +LE I+ + I ++QV +P GM + F P
Sbjct: 124 IAAYLKLEPGEQLGKEVKYTDAGTILLGLMLEEIYQETAVEIFQEQVLEPLGMMNSLFLP 183
Query: 182 V--ELAVPTVR----GVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFAR 235
+ VPT + V G HDPKAR+L HAG+AGLF +KD F++ YL R
Sbjct: 184 FPSKKIVPTEQLPSGEVLRGQTHDPKARVLAEHAGNAGLFIDLKDSITFVQMYLNKGKIR 243
Query: 236 D-----------LNQNFSPLDDKERSLAWNLEGDWLD------HTGYTGTFIMWNRQKQE 278
+ L Q+ +P + RSL W+L+ D D HTGYTGTF + + + QE
Sbjct: 244 NGRFLEEETIDSLLQDQTPKKNGYRSLGWDLKKDVEDGHAILFHTGYTGTFFLIDIKTQE 303
Query: 279 ATIFLSNRTYEKDERAQWILDRNQVMNLIRKEE 311
A IFLSNR + D RA++++ R++++ KE+
Sbjct: 304 ALIFLSNRVHPVDHRAEYLICRDEIVENFLKEK 336
>gi|92090073|ref|ZP_01274980.1| Beta-lactamase [Lactobacillus reuteri 100-23]
gi|91803159|gb|EAS88051.1| Beta-lactamase [Lactobacillus reuteri 100-23]
Length = 339
Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 116/339 (34%), Positives = 185/339 (54%), Gaps = 35/339 (10%)
Query: 2 KWTKIIKKIEEQIEAGIYPGASFAYFKDNQWT---EFYLGQSDPEHGLQTEAGLVYDLAS 58
K+ I K+ + ++ G+ PG S+ F D+Q T + Q PE + + G++YD+AS
Sbjct: 3 KYDLTITKLHQMVKEGVVPGVSYLIF-DHQHTIREVTGMAQVYPETEI-LKPGMLYDVAS 60
Query: 59 VSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLL 118
++KVVG V L + G L +D + +LPE + TIR LLTH + + +IP+R+ L
Sbjct: 61 LTKVVGTVPVIAQLIQKGTLSLDDPIKQYLPEFNDDRPTIRNLLTHTSGIAGYIPHRNEL 120
Query: 119 TAPELKEAMF---HLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMT 175
TA ELK A H+ Y+DV++L LG+I+ERI++Q + ++ +QV KP +
Sbjct: 121 TASELKNAFLTKMHVEDSLNRQIKYADVNYLYLGWIIERIYDQPVQNVITEQVLKPLNLP 180
Query: 176 ETKFGP-----VELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLA 230
F P V V T RG+ G HDPK +LG G AGLF+++KDL+IF H L
Sbjct: 181 TATFNPTPANCVPTEVQTKRGLIRGTTHDPKGYILGASCGCAGLFASLKDLEIF-SHALI 239
Query: 231 DDFARDLNQNFSP------LDDK-------ERSLAWNL----EGDW-LDHTGYTGTFIMW 272
++ +LN +P D+ RSL W L +G + HTG+TGT+++
Sbjct: 240 EN---NLNGLLTPKIINLLFKDQTRIPGPHSRSLGWKLFHAKDGHLVISHTGFTGTWMVL 296
Query: 273 NRQKQEATIFLSNRTYEKDERAQWILDRNQVMNLIRKEE 311
+RQ + I L+NR + + +++ R+Q++ + KE+
Sbjct: 297 DRQNDQGFIVLTNRVHPSAKNQEFLDVRDQLLAIYLKEK 335
>gi|116333903|ref|YP_795430.1| Beta-lactamase class C related penicillin binding protein
[Lactobacillus brevis ATCC 367]
gi|116099250|gb|ABJ64399.1| Beta-lactamase class C related penicillin binding protein
[Lactobacillus brevis ATCC 367]
Length = 339
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 113/326 (34%), Positives = 176/326 (53%), Gaps = 37/326 (11%)
Query: 17 GIYPGASFAYFKDNQWTEFYLGQSD--PEHGLQTEA---GLVYDLASVSKVVGVGTVCTF 71
G+ PG S+++ ++ +GQ+ P QTE G++YD+AS++KVVG +V
Sbjct: 17 GVVPGVSYSFIDGDRVETGVIGQAALVP----QTEPLRPGMLYDVASLTKVVGTLSVVLQ 72
Query: 72 LWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAMFHLN 131
L G+L + V D+LP+ +TI+ LLTH + + +IP+RD L APEL A+ L+
Sbjct: 73 LLAQGRLHLTDSVSDWLPQWQDSRVTIQHLLTHTSGITGYIPHRDQLAAPELTAALLKLH 132
Query: 132 RRSQPAF----LYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPV--ELA 185
P F +Y+DV+++ LG+I+E+I Q + + + +V P GM + F P E
Sbjct: 133 --VGPTFNRQMVYADVNYIFLGWIVEQILQQPIQTVAQQRVLTPLGMQHSTFTPTNAEQC 190
Query: 186 VPTV----RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFA------- 234
VPT RGV G+VHDPK +L R GSAGLFST+ DL F + YL + A
Sbjct: 191 VPTAVTAERGVIRGMVHDPKGLVLQRRCGSAGLFSTVADLTRFCQAYLRPEAAATVLPPQ 250
Query: 235 --RDLNQNFSPLDDKERSLAWNL-EGDW------LDHTGYTGTFIMWNRQKQEATIFLSN 285
L +++P RSL W L W + H+G+TGT+++ + Q+A +FL+N
Sbjct: 251 WVHHLLSDWTPTHQAGRSLGWALTTAQWPTAHRVIWHSGFTGTYLVIDPLMQQAMVFLTN 310
Query: 286 RTYEKDERAQWILDRNQVMNLIRKEE 311
R + ++ RN V++ E+
Sbjct: 311 RVHPIAPNEPYLDQRNAVISTYLAEK 336
>gi|77745349|gb|ABB02575.1| putative esterase [Lactobacillus reuteri]
Length = 339
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 110/338 (32%), Positives = 176/338 (52%), Gaps = 33/338 (9%)
Query: 2 KWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSD--PEHGLQTEAGLVYDLASV 59
K+ I K+ + ++ G+ PG S+ F + G + PE + + G++YD+AS+
Sbjct: 3 KYDLTITKLHQMVKEGVVPGVSYLIFDHQHTIKEVTGMAQIYPETEI-LKPGMLYDIASL 61
Query: 60 SKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLT 119
+KV+G V L + G L +D V FLPE + TIR LLTH + + +IP+R+ LT
Sbjct: 62 TKVIGTVPVIAQLIQKGTLSLDDPVKKFLPEFNDDRPTIRNLLTHTSGITGYIPHRNELT 121
Query: 120 APELKEAMF-------HLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPW 172
A +LK A LNR+ + Y+DV++L LG+I+ERI+NQ + ++ +QV KP
Sbjct: 122 ASKLKNAFLTKMYVEDSLNRQIK----YADVNYLYLGWIIERIYNQPVQKVITEQVLKPL 177
Query: 173 GMTETKFGP-----VELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEH 227
M F P V V RG+ G HDPK +LG G AGLF+++KDL++F
Sbjct: 178 NMPTATFRPQPANCVPTEVQEKRGLIRGETHDPKGYILGESCGCAGLFASLKDLEVFSHA 237
Query: 228 YLADDFARDLNQNFSPL---------DDKERSLAWNL-----EGDWLDHTGYTGTFIMWN 273
+ ++ L + L RSL W L + HTG+TGT+++ +
Sbjct: 238 LIENNLKGLLTSETTDLLFTDQTRIPGPHSRSLGWKLFHAKDRHLLISHTGFTGTWMVLD 297
Query: 274 RQKQEATIFLSNRTYEKDERAQWILDRNQVMNLIRKEE 311
RQ + I L+NR + + +++ R+Q+ + KE+
Sbjct: 298 RQTDQGFIVLTNRVHPSAKNQEYLDARDQLFAIYLKEK 335
>gi|148543679|ref|YP_001271049.1| beta-lactamase [Lactobacillus reuteri F275]
gi|148530713|gb|ABQ82712.1| beta-lactamase [Lactobacillus reuteri F275]
Length = 339
Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 112/337 (33%), Positives = 171/337 (50%), Gaps = 31/337 (9%)
Query: 2 KWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLG--QSDPEHGLQTEAGLVYDLASV 59
K+ I K+ + ++ GI PG S+ F + G Q PE L + G++YD+AS+
Sbjct: 3 KYDLTITKLHQMVKEGIVPGVSYVIFDRQHTIKEVTGMAQVYPETEL-LKPGMLYDVASL 61
Query: 60 SKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLT 119
+KV+G V L + G L +D + +LPE + TIR LLTH + + +IP+R+ LT
Sbjct: 62 TKVIGTVPVIAMLIQKGALSLDDPIKKYLPEFNDNRPTIRNLLTHTSGIAGYIPHRNELT 121
Query: 120 APELKEAMF---HLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTE 176
A ELK A + Y+DV++L LG+I+ERI+NQ + ++ +QV KP M
Sbjct: 122 ASELKTAFLTRMQVEDSLNHQIKYADVNYLYLGWIIERIYNQPVQKVIAEQVLKPLNMPT 181
Query: 177 TKFGP-----VELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIF------- 224
F P V V RG+ G HDPK +LG G AGLF+++KDL+IF
Sbjct: 182 ATFNPHPANCVPTEVQEKRGLIRGETHDPKGYILGESCGCAGLFASLKDLEIFSHALIEN 241
Query: 225 -----LEHYLADDFARDLNQNFSPLDDKERSLAWNL-----EGDWLDHTGYTGTFIMWNR 274
L D F D + P RSL W L + HTG+TGT+++ +R
Sbjct: 242 NLNGLLTSETIDLFFTDQTRIPGP---HSRSLGWKLFHAKDHHLLISHTGFTGTWMVLDR 298
Query: 275 QKQEATIFLSNRTYEKDERAQWILDRNQVMNLIRKEE 311
Q + I L+NR + + +++ R+Q+ + E+
Sbjct: 299 QTDQGFIVLTNRVHPSAKNQEFLAARDQLFAIYLTEK 335
>gi|90961560|ref|YP_535476.1| Beta-lactamase family protein [Lactobacillus salivarius subsp.
salivarius UCC118]
gi|90820754|gb|ABD99393.1| Beta-lactamase family protein [Lactobacillus salivarius subsp.
salivarius UCC118]
Length = 333
Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 169/316 (53%), Gaps = 22/316 (6%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQT-EAGLVYDLASVSKVVGVGTV 68
IE + I PG S+A K + +G S ++ +AG++YD+AS++KVVG TV
Sbjct: 9 IENLYKDNIVPGVSYAVIKPGEVLTKVIGNSQLIPKVEKLKAGMLYDMASLTKVVGTTTV 68
Query: 69 CTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAMF 128
L+E ++ ID V D+LP +TIR LLTH + L+ +IP+R+ L A EL EAM+
Sbjct: 69 ILKLFEDNKISIDDKVKDYLPLFKDDRVTIRHLLTHTSALNGYIPHRNELNAQELIEAMY 128
Query: 129 HLNRRS--QPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVE-LA 185
L +Y+D +LLG I+++I+N+ + ++ ++ +P + E+ F P L
Sbjct: 129 TLKVGDWLGKKVVYTDTGLILLGEIIQKIYNKPVQTVIMQEILQPLQLFESTFNPDPGLC 188
Query: 186 VPTV----RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIF--------LEHYLADDF 233
VPT V GIVHDPKAR+LG++ GSAGLF ++ DL F L D
Sbjct: 189 VPTEVQKNGKVLKGIVHDPKARILGKYCGSAGLFMSLNDLIKFSNWIIHNSQNRVLKDKT 248
Query: 234 ARDLNQNFSPLDDKERSLAWNLE--GDWLD---HTGYTGTFIMWNRQKQEATIFLSNRTY 288
L +++P RSL W+L D + HTGYTGTFI+ +R I LSNR +
Sbjct: 249 ISKLFNDWTPNGTLGRSLGWDLRYRNDGVPCIYHTGYTGTFILIDRDSGCGLIVLSNRVH 308
Query: 289 EKDERAQWILDRNQVM 304
Q LDR ++
Sbjct: 309 PSSNN-QIFLDRRDII 323
>gi|81428756|ref|YP_395756.1| hypothetical protein LSA1147 [Lactobacillus sakei subsp. sakei 23K]
gi|78610398|emb|CAI55448.1| Hypothetical protein [Lactobacillus sakei subsp. sakei 23K]
Length = 336
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 113/329 (34%), Positives = 178/329 (54%), Gaps = 28/329 (8%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGL-QTEAGLVYDLASV 59
M++ + I +IE + + PG S+A + Q T LG S+ L E G +YDLAS+
Sbjct: 1 MRFEQTIHQIEALVADEVVPGVSYAVIEGQQVTTKVLGYSELTPKLIPLEPGQLYDLASL 60
Query: 60 SKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLT 119
+KV+G T+ L E G+L + V LP +T+ LLTH + L+ +IPNR+ L
Sbjct: 61 TKVIGTTTLILRLLERGRLSLTTKVHSILPAFKDLRVTVLHLLTHTSGLEGYIPNRNQLA 120
Query: 120 APELKEAMFHLNRRSQPAF----LYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMT 175
AP LKEA+ P F +Y+D+ L LG++LE I+ + + +++ V P GMT
Sbjct: 121 APALKEALL-TQLTVGPNFGKKVVYTDIGMLYLGWMLEVIYGKPIQDLIQSLVLTPLGMT 179
Query: 176 ETKFGP-VELAVPT----VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL- 229
E+ F P AVPT RG+ G+VHDPK+ +L H+G+AGLF+ + D+ F + L
Sbjct: 180 ESTFSPEASRAVPTELTTARGLIQGVVHDPKSYVLQNHSGAAGLFAPLDDVVRFAQFQLG 239
Query: 230 ---------ADDFARDLNQNFSPLDDKERSLAWNL-----EGDWLDHTGYTGTFIMWNRQ 275
+ + L ++++P RSL W+L + + HTG+TGTF++ +R+
Sbjct: 240 QLKVAEAPVSQASVKGLYRDWTPAH-LGRSLGWDLRFTADQTPLIYHTGFTGTFMILDRK 298
Query: 276 KQEATIFLSNRTYEKDERAQWILDRNQVM 304
+Q + LSNR + + Q LDR ++
Sbjct: 299 RQTGLVVLSNRIHPTADN-QTFLDRRTMI 326
>gi|28378955|ref|NP_785847.1| esterase (putative) [Lactobacillus plantarum WCFS1]
gi|28271792|emb|CAD64698.1| esterase (putative) [Lactobacillus plantarum WCFS1]
Length = 339
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 113/315 (35%), Positives = 171/315 (54%), Gaps = 30/315 (9%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTE-AGLVYDLASV 59
+ +++ I + ++ + PGAS+A +W +G + + ++ +YDLASV
Sbjct: 2 LTFSRTAALINQMVQDQVIPGASYALIDGAEWHTNQVGVAQIKPTIKPLWPDAMYDLASV 61
Query: 60 SKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLT 119
+KVVG TV L + GQL+IDR V D+LP IT+R L+TH + L +IPNR+ L+
Sbjct: 62 TKVVGTTTVAMQLMQNGQLEIDRPVHDYLPTLQSTTITVRNLMTHTSGLSGYIPNRNALS 121
Query: 120 APELKEAMFHL---NRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTE 176
A L A+ L R +Y+D+ +++G ++ERI + I+ ++V +P G+
Sbjct: 122 ADALLAAIQQLPISERNRNHRVVYTDLGLIIMGQVIERILGAAIQPIITERVLQPLGLAH 181
Query: 177 TKFGP-VELAVPTV----RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDL---------Q 222
T F P + VPT G+ GIVHDPKAR+LG H GSAGLF+++ DL Q
Sbjct: 182 TSFQPQLAQTVPTTYSMKTGLLRGIVHDPKARVLGEHCGSAGLFASVTDLVRFSQLMLGQ 241
Query: 223 IFLEHYLADDFARDLNQNFSPLDDKERSLAWNLEGDW---------LDHTGYTGTFIMWN 273
I + L+ L Q+++P RS WNL W + HTGYTGT +M +
Sbjct: 242 IDVPAVLSQATIASLYQDWTPNQHLRRSFGWNL---WHRSDETLPVIFHTGYTGTLLMLD 298
Query: 274 RQKQEATIFLSNRTY 288
RQ+Q +FLSNR +
Sbjct: 299 RQRQRGLVFLSNRVH 313
>gi|116629886|ref|YP_815058.1| Beta-lactamase class C related penicillin binding protein
[Lactobacillus gasseri ATCC 33323]
gi|116095468|gb|ABJ60620.1| Beta-lactamase class C related penicillin binding protein
[Lactobacillus gasseri ATCC 33323]
Length = 377
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 110/325 (33%), Positives = 168/325 (51%), Gaps = 25/325 (7%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLGQSD--PEHGLQTEAGLVYDLASVSKVVGVGT 67
IE + I PG ++A+ K Q +G + PE Q +YDLAS++KV+G
Sbjct: 49 IESMVSERIVPGVNYAFIKKKQVFTSTVGFASLMPEIE-QLSPFALYDLASLTKVLGTTN 107
Query: 68 VCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAM 127
V L E G+L+ + +F+PE I + LLTH + + +IPNRD L AP+L +A+
Sbjct: 108 VFLKLKEEGKLNFTEPLQEFIPEFKDDRIRLSHLLTHTSGIRGWIPNRDELAAPDLLKAI 167
Query: 128 FHL--NRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGP-VEL 184
L + Y+D +F+LLG +LE+I+ + ++ ++ P + ET F P
Sbjct: 168 IGLPVTDEFETKMRYADTNFILLGLVLEKIYGLPVQDVIMQEIILPAKLKETTFHPKASD 227
Query: 185 AVPTVRGVEA----GIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLA---------D 231
VPT + GIVHDPKAR+LG+ GSAGLFS ++DL + YL
Sbjct: 228 CVPTAYTEQGELLQGIVHDPKARVLGKDCGSAGLFSNLEDLIKMTQAYLGLRHDILPLKQ 287
Query: 232 DFARDLNQNFSPLDDKERSLAWNLEGDWLD------HTGYTGTFIMWNRQKQEATIFLSN 285
D +L Q +P + RS W+L D +D HTG+TGTFI+ +R Q A + L+N
Sbjct: 288 DTLANLFQIETPKNVHPRSWGWDLRFDPVDQHPLIYHTGFTGTFILIDRLNQTAMVVLTN 347
Query: 286 RTYEKDERAQWILDRNQVMNLIRKE 310
R + ++ R ++++ KE
Sbjct: 348 RIHPSGHNHVFLAMREKIVDTFLKE 372
>gi|116513787|ref|YP_812693.1| Beta-lactamase class C related penicillin binding protein
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|116093102|gb|ABJ58255.1| Beta-lactamase class C related penicillin binding protein
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 334
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 111/323 (34%), Positives = 167/323 (51%), Gaps = 23/323 (7%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLGQSD--PEHGLQTEAGLVYDLASVSKVVGVGT 67
IE + I PG ++A K +Q LG + P Q YDLAS SKV+
Sbjct: 11 IESLVSERIVPGVNYALLKGDQVFASTLGFASIYPAKS-QLSPFAYYDLASCSKVLATTA 69
Query: 68 VCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAM 127
L E G++D + ++PE + + LLTH + + +I NR+ L+ PEL A+
Sbjct: 70 AFLQLREEGKVDFADPLQKYVPEFKDGRVRLSHLLTHTSGIRGWIENRNALSGPELMRAI 129
Query: 128 FHLNRRSQ--PAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG-PVEL 184
L S+ Y+D +F+LLG +LERI + + + +++++P G+TET F P E
Sbjct: 130 VGLPVTSEFNRVVRYADTNFVLLGLVLERITGKAVQDLASERIFRPAGLTETTFAPPKEK 189
Query: 185 AVPT--VRG-VEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHY--------LADDF 233
VPT V G V G VHDPK + LGR GSAGLFST+ DL + Y L ++
Sbjct: 190 CVPTELVDGQVIQGFVHDPKGQQLGRRCGSAGLFSTVSDLVKMGQGYMGVSDLLPLKEET 249
Query: 234 ARDLNQNFSPLDDKERSLAWNLEGD------WLDHTGYTGTFIMWNRQKQEATIFLSNRT 287
+DL Q +P K RS WNL D + HTG+TGT +++++ KQ I L+NR
Sbjct: 250 IQDLYQVKTPAGLKARSWGWNLVFDPKENYPIIYHTGFTGTLVLFDQVKQSGLILLTNRV 309
Query: 288 YEKDERAQWILDRNQVMNLIRKE 310
+ ++ R++++N +E
Sbjct: 310 HPSRHNQIFLTMRSRIINAFLQE 332
>gi|104773781|ref|YP_618761.1| Putative penicillin binding protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|103422862|emb|CAI97524.1| Putative penicillin binding protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
Length = 334
Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 111/323 (34%), Positives = 167/323 (51%), Gaps = 23/323 (7%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLGQSD--PEHGLQTEAGLVYDLASVSKVVGVGT 67
IE + I PG ++A K +Q LG + P Q YDLAS SKV+
Sbjct: 11 IESLVSERIVPGVNYALLKGDQVFASTLGFASIYPAKS-QLSPFAYYDLASCSKVLATTA 69
Query: 68 VCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAM 127
L E G++D + ++PE + + LLTH + + +I NR+ L+ PEL A+
Sbjct: 70 AFLQLREEGKVDFADPLQKYVPEFKDGRVRLSHLLTHTSGIRGWIENRNALSGPELMRAI 129
Query: 128 FHLNRRSQ--PAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG-PVEL 184
L S+ Y+D +F+LLG +LERI + + + +++++P G+TET F P E
Sbjct: 130 VGLPVTSEFNRVVRYADTNFVLLGLVLERITGKAVQDLASERIFRPAGLTETTFAPPKEE 189
Query: 185 AVPT--VRG-VEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHY--------LADDF 233
VPT V G V G VHDPK + LGR GSAGLFST+ DL + Y L ++
Sbjct: 190 CVPTELVDGQVIQGFVHDPKGQQLGRRCGSAGLFSTVSDLVKMGQGYMGVSDLLPLKEET 249
Query: 234 ARDLNQNFSPLDDKERSLAWNLEGD------WLDHTGYTGTFIMWNRQKQEATIFLSNRT 287
+DL Q +P K RS WNL D + HTG+TGT +++++ KQ I L+NR
Sbjct: 250 IQDLYQVKTPAGLKARSWGWNLVFDPKENYPIIYHTGFTGTLVLFDQVKQSGLILLTNRV 309
Query: 288 YEKDERAQWILDRNQVMNLIRKE 310
+ ++ R++++N +E
Sbjct: 310 HPSRHNQIFLTMRSRIINAFLQE 332
>gi|42518852|ref|NP_964782.1| hypothetical protein LJ0927 [Lactobacillus johnsonii NCC 533]
gi|41583138|gb|AAS08748.1| hypothetical protein LJ_0927 [Lactobacillus johnsonii NCC 533]
Length = 339
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 109/324 (33%), Positives = 165/324 (50%), Gaps = 23/324 (7%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLG-QSDPEHGLQTEAGLVYDLASVSKVVGVGTV 68
+E + I PG ++A+ K Q +G S Q +YDLAS++KV+G V
Sbjct: 11 VESMVSERIVPGVNYAFIKKKQVFTSTVGFASLIPKVEQLSPFALYDLASLTKVLGTTNV 70
Query: 69 CTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAMF 128
L E G+L+ + DF+PE I + LLTH + + +IPNRD L AP+L +A+
Sbjct: 71 FLKLKEEGKLNFTEPLKDFIPEFKDERIRLSDLLTHTSGIRGWIPNRDELAAPDLLKAII 130
Query: 129 HL--NRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGP-VELA 185
L + Y+D +F+LLG +LE+I+ + I+ ++ P + ET F P
Sbjct: 131 GLPVTDEFKTKMRYADTNFILLGLVLEKIYGLPVQDIIMQEIILPAKLKETTFHPKASEC 190
Query: 186 VPTVRGVEA----GIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLA---------DD 232
VPT + GIVHDPKAR+LG+ GSAGLF+ ++DL + YL D
Sbjct: 191 VPTALTEKGKMLRGIVHDPKARVLGKDCGSAGLFANLEDLIKITQAYLGLRNDVLPLQQD 250
Query: 233 FARDLNQNFSPLDDKERSLAWNLEGDWLD------HTGYTGTFIMWNRQKQEATIFLSNR 286
+L Q +P RS W+L D +D HTG+TGTF++ +R Q A I L+NR
Sbjct: 251 TLANLFQVETPKKVHPRSWGWDLRFDPVDQHPLIYHTGFTGTFMLIDRLNQTAMIVLTNR 310
Query: 287 TYEKDERAQWILDRNQVMNLIRKE 310
+ ++ R ++++ KE
Sbjct: 311 IHPSGHNHIFLAMREKIVDTFLKE 334
>gi|116494649|ref|YP_806383.1| Beta-lactamase class C related penicillin binding protein
[Lactobacillus casei ATCC 334]
gi|116104799|gb|ABJ69941.1| Beta-lactamase class C related penicillin binding protein
[Lactobacillus casei ATCC 334]
Length = 335
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 103/317 (32%), Positives = 169/317 (53%), Gaps = 27/317 (8%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSD--PEHGLQTEAGLVYDLAS 58
M + + +++ +A + PG S A G++ P+ + ++YD+AS
Sbjct: 1 MDFQAVTDELKTWTKARVMPGFSVALLTGKTVQTAVSGEAQWFPQPA-PLQPHMLYDVAS 59
Query: 59 VSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYP-DITIRQLLTHATDLDPFIPNRDL 117
++KV+G TV W+ G + D + FLP D+P T RQ LTH + L+ +IP+R+
Sbjct: 60 LTKVIGTTTVFLQAWDQGLVSPDMPLHRFLP--DFPHTTTFRQALTHTSGLEGYIPHRNA 117
Query: 118 LTAPELKEAM---FHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGM 174
L AP LK+A+ + +Y DV+ LL+G+ LE++++Q + ++ QV +P +
Sbjct: 118 LPAPALKQALMTQLTVTEEVDRQVVYRDVNLLLVGWALEQVYHQPIQTLITRQVIQPLAL 177
Query: 175 TETKFGP-VELAVPTVR----GVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL 229
+ F P + VPT G+ G+VHDPK+ +LG+H+G+AGLF+++ DL F E++
Sbjct: 178 PQATFQPDSQQCVPTTYSPAVGLRQGVVHDPKSAILGKHSGAAGLFASLADLVTFTEYFF 237
Query: 230 ADD-------FARDLNQNFSPLDDKERSLAWNLEGD-----WLDHTGYTGTFIMWNRQKQ 277
+ A DL Q+++ RSL W+L D WL HTGYTGTF + Q
Sbjct: 238 GNRQSASWPAHAVDLTQDWTK-HHLGRSLGWDLRRDGQGRLWLYHTGYTGTFWLIQPDDQ 296
Query: 278 EATIFLSNRTYEKDERA 294
A + L+NR + + A
Sbjct: 297 LALVVLTNRVHPQPNPA 313
>gi|116493083|ref|YP_804818.1| Beta-lactamase class C related penicillin binding protein
[Pediococcus pentosaceus ATCC 25745]
gi|116103233|gb|ABJ68376.1| Beta-lactamase class C related penicillin binding protein
[Pediococcus pentosaceus ATCC 25745]
Length = 332
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 108/332 (32%), Positives = 169/332 (50%), Gaps = 22/332 (6%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWT-EFYLGQSDPEHGLQTEA-GLVYDLAS 58
M +T I+ +E I PGA + + + E G S + A G +D+AS
Sbjct: 1 MVFTDTENLIQAMLEQQIIPGADYTFIHHGRLVHEVTTGYSSVVPIKRRLAQGEYFDVAS 60
Query: 59 VSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLL 118
++KV+G + +L + G+++++ V +LP+ +T+R LLTH + +I RD L
Sbjct: 61 LTKVMGTVPLTLWLEQQGRINLEAPVSQYLPQIKDARVTLRHLLTHTSGAKAWIDQRDEL 120
Query: 119 TAPELKEAMFH---LNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMT 175
A EL+EA+++ +Y+D +FLLLGFI+ER+ + + V ++ V +PWG+
Sbjct: 121 NASELREAIYNNLTFGADFNQKVVYNDYNFLLLGFIIERVLHMPVQVAIQKYVLQPWGLE 180
Query: 176 ETKFGP-VELAVPT-VRG--VEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLAD 231
+ F P A+PT VR + G VHDPKA LG HAGSAGLFST D+ F LA+
Sbjct: 181 ASSFTPDPHQAIPTQVRNGILTKGQVHDPKAASLGLHAGSAGLFSTKHDVVKFTLKMLAN 240
Query: 232 D-------FARDLNQNFSPLDDKERSLAWNL-----EGDWLDHTGYTGTFIMWNRQKQEA 279
+ R N + RS W L H+G+TGTFI+ +R Q
Sbjct: 241 ENELLDETTMRQFEGNQTTNSKLLRSWGWAFVTRKPHQVLLRHSGFTGTFILLDRLTQNG 300
Query: 280 TIFLSNRTYEKDERAQWILDRNQVMNLIRKEE 311
+FLSNR + + +++ R ++ KE+
Sbjct: 301 LVFLSNRVHPQ-PNLEFLEYRQKIYQTFAKED 331
>gi|116490470|ref|YP_810014.1| Beta-lactamase class C related penicillin binding protein
[Oenococcus oeni PSU-1]
gi|118587551|ref|ZP_01544975.1| esterase [Oenococcus oeni ATCC BAA-1163]
gi|116091195|gb|ABJ56349.1| Beta-lactamase class C related penicillin binding protein
[Oenococcus oeni PSU-1]
gi|118432002|gb|EAV38744.1| esterase [Oenococcus oeni ATCC BAA-1163]
Length = 337
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 103/299 (34%), Positives = 157/299 (52%), Gaps = 23/299 (7%)
Query: 21 GASFAYFKDNQWTEFYLG-QSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLD 79
G S++ +Q YLG Q + + EA + YDLAS++KVVG T L G+LD
Sbjct: 23 GISYSLIAADQSEYHYLGFQGKNQDAIALEANMQYDLASLTKVVGTTTRILQLLSEGKLD 82
Query: 80 IDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAMFHLNR--RSQPA 137
++ V F+ D P ITI+QLL H + L I N + L +A+ + + +
Sbjct: 83 LEDPVGKFINGVDKPKITIKQLLLHRSGLRADIKNVWDFSREALIKAVKEMPQLCPADTK 142
Query: 138 FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGP---VELAVPTVR---- 190
+YSD++F+LLG+++++I + DL L++ +++P GMT T + P ++ VPT +
Sbjct: 143 TIYSDLNFILLGWVIQKI-DGDLSKSLEEHIFQPIGMTNTSYNPRADRKIFVPTEKQIKR 201
Query: 191 -GVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARD---LNQNFSPLDD 246
G+ G VHD K+ LL +G AGLFST+ DL F + YL + D L + P+ +
Sbjct: 202 GGIIRGEVHDEKSHLLDGVSGHAGLFSTLTDLTRFAQMYLHKGYYNDQQILPEAVFPILE 261
Query: 247 KE----RSLAWNL----EGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWI 297
R+L W G L HTG+TGT I N Q A + L+NR Y E +W+
Sbjct: 262 NSVTSGRTLGWRCWMTPAGQSLWHTGFTGTSIALNLVNQSAFVCLTNRVYPTRENRRWL 320
>gi|28379670|ref|NP_786562.1| esterase (putative) [Lactobacillus plantarum WCFS1]
gi|28272510|emb|CAD65434.1| esterase (putative) [Lactobacillus plantarum WCFS1]
Length = 329
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 110/323 (34%), Positives = 161/323 (49%), Gaps = 24/323 (7%)
Query: 5 KIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLG-QSDPEHGLQTEAGLVYDLASVSKVV 63
KI + I+ IEAG GASF+ ++Y G Q E + + ++YDLASV+KVV
Sbjct: 6 KIEQYIDSCIEAGDIYGASFSLITPKGINQYYHGKQGRDEFAVGLDPAMIYDLASVTKVV 65
Query: 64 GVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPEL 123
G T L + + V FLP +P+ITI+ LL H + L I N D + +L
Sbjct: 66 GTTTRIFQLLSDHTIHLTDSVARFLPGFTHPEITIKNLLLHNSGLPADIDNLDKMQREDL 125
Query: 124 KEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG- 180
+A++ + P ++YSD+ F+LLG+I+ R + L ++D V P MT T +
Sbjct: 126 IKAVYDAPLVTAPGTTYVYSDLGFILLGWII-RAVDGSLARSIQDHVCYPLAMTNTGYNL 184
Query: 181 --PVELAVPTV----RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFA 234
P VPT RG G VHD KA LL +G AGLFST+ DL +F+E L +F
Sbjct: 185 NRPKIRFVPTEFDPRRGQIQGQVHDYKAFLLNGESGHAGLFSTLTDLSVFIEMML--NFG 242
Query: 235 -----RDLNQN----FSPLDDKERSLAWNLEGDWLD--HTGYTGTFIMWNRQKQEATIFL 283
R L++N D+ R+L W HTG+TG + ++ +Q + L
Sbjct: 243 EYQGKRVLDENVFDWLGEYDENGRTLGWERRAGRHQYFHTGFTGPAVAFDLDRQIGLVVL 302
Query: 284 SNRTYEKDERAQWILDRNQVMNL 306
+NR Y + W DR +V +L
Sbjct: 303 TNRVYPTSDNQVWNQDRKRVFDL 325
>gi|112148504|gb|ABI13550.1| beta-lactamase class C-like protein [Lactobacillus helveticus
CNRZ32]
Length = 337
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 104/334 (31%), Positives = 165/334 (49%), Gaps = 26/334 (7%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGL-QTEAGLVYDLASV 59
+ + K IE + + PG ++ + KD Q G + + Q YDLAS+
Sbjct: 2 IDYNKTQHLIESMVLERVVPGVNYTFIKDKQIFTSTTGFASIYPTVTQLSPFAEYDLASL 61
Query: 60 SKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLT 119
+KV+ V L++ G+L+ + +F+PE I + LLTH + + +IP+RD L
Sbjct: 62 TKVLATENVLLKLYDQGKLNFTEPLQEFIPEFKDSRIRLYHLLTHTSGIRGWIPHRDELN 121
Query: 120 APELKEAMFHL--NRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTET 177
EL +A+ +L + Y+D +F+LLG ++++IFN+ + + +V+ + T
Sbjct: 122 HDELLKAIINLPVTGEFEHKMRYADTNFILLGLVIKKIFNRPVQEVATTEVFNQMPLAHT 181
Query: 178 KFGP-VELAVPT--VRG-VEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDF 233
F P E VPT V G V G+ HDPKAR L GSAGLFST++DL F + YL
Sbjct: 182 TFSPKKEACVPTAIVNGHVLQGVPHDPKARQLRADCGSAGLFSTMQDLITFSQGYLG--L 239
Query: 234 ARD-----------LNQNFSPLDDKERSLAWNLEGD------WLDHTGYTGTFIMWNRQK 276
+D L N +P K RS W+L D + HTG+TGT ++ +R K
Sbjct: 240 KKDVLPYSQKTVSLLFDNKNPAGVKPRSWGWDLRFDPKNHYPIILHTGFTGTLMILDRIK 299
Query: 277 QEATIFLSNRTYEKDERAQWILDRNQVMNLIRKE 310
+ I L+NR + ++ R +++ KE
Sbjct: 300 RSGLILLTNRIHPTGHNTIFLAMREKIIRSFLKE 333
>gi|58337068|ref|YP_193653.1| putative esterase [Lactobacillus acidophilus NCFM]
gi|58254385|gb|AAV42622.1| putative esterase (b-lactamase) [Lactobacillus acidophilus NCFM]
Length = 337
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 98/327 (29%), Positives = 161/327 (49%), Gaps = 24/327 (7%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSD--PEHGLQTEAGLVYDLAS 58
+ + K IE + + PG ++A+ K+ Q G + PE Q YDLAS
Sbjct: 2 INYNKTQHLIESMVFERVVPGVNYAFIKNKQIFTSTTGFASIYPEV-TQLSPFAEYDLAS 60
Query: 59 VSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLL 118
++KV+ V L++ G+L+ + +F+P P + + LLTH + + +IP+RD L
Sbjct: 61 LTKVLATENVLLKLYDQGELNFTEPLKEFIPTFKDPKVRLYHLLTHTSGIRGWIPHRDEL 120
Query: 119 TAPELKEAMFHL--NRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTE 176
+ EL A+ +L + Y+D +F+LLG +++ IF + + +++ +
Sbjct: 121 SHDELLNALINLPVTDEFEHKMRYADTNFILLGLVIKSIFGASVQEVATKEIFDQMPLIN 180
Query: 177 TKFGPVEL-AVPTV---RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL--- 229
T F P + VPT V GI HDPKAR LG GSAGLFS ++DL F + YL
Sbjct: 181 TTFTPNKSECVPTAIINDQVLQGIPHDPKARQLGLDCGSAGLFSNMRDLITFSQGYLGLK 240
Query: 230 ------ADDFARDLNQNFSPLDDKERSLAWNLEGD------WLDHTGYTGTFIMWNRQKQ 277
+ D +L + +P K RS W++ D + HTG+TGT I+ +R K+
Sbjct: 241 RNVLPYSQDTVSELFDDKTPKGVKPRSWGWDIRFDPKYHYPIILHTGFTGTLIILDRLKK 300
Query: 278 EATIFLSNRTYEKDERAQWILDRNQVM 304
I L+NR + ++ R +++
Sbjct: 301 SGLILLTNRVHPTGHNTIFLAMREKII 327
>gi|16801096|ref|NP_471364.1| hypothetical protein lin2030 [Listeria innocua Clip11262]
gi|16414531|emb|CAC97260.1| lin2030 [Listeria innocua]
Length = 335
Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 94/321 (29%), Positives = 161/321 (50%), Gaps = 21/321 (6%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLGQSD--PE-HGLQTEAGLVYDLASVSKVVGVG 66
+++ ++ G PG S+ +N +G PE L +YD+AS++KV+
Sbjct: 9 LDQLVQNGSTPGISYQIKTNNLEENRIMGLKSVFPEAQILPRTTDNIYDIASLTKVIATT 68
Query: 67 TVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEA 126
T L E ++ V +LP+ Y ++TI LLTH++ L IPN + +++
Sbjct: 69 TRVLQLIEQKHFQLEDPVQAYLPDFKYENVTILHLLTHSSGLAQNIPNYKMGAKEDVRSY 128
Query: 127 MFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVEL 184
+F + + P Y+D +FLLLG+++ + F+ + + ++ + +P M+ T F P +
Sbjct: 129 VFATPQVNSPGTQVTYADANFLLLGYLISK-FDGNYEQSIQKNILEPLKMSHTSFHPTDK 187
Query: 185 A--VPT----VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHY--------LA 230
+ +PT RG+ G VHD KA G AGLFST+ DL F + L
Sbjct: 188 SQVIPTELDQTRGLIQGDVHDFKAWTAKSGTGHAGLFSTLADLSKFRDALILQNGDPILT 247
Query: 231 DDFARDLNQNFSPLDDKERSLAWNLEGDW-LDHTGYTGTFIMWNRQKQEATIFLSNRTYE 289
+ + + N +P ++ R L W+L GD L HTG+TGTF+ + Q Q + I LSNR +
Sbjct: 248 EKTLQIMQINHTPGLNRTRGLGWDLRGDSVLYHTGFTGTFMALDLQNQASLIVLSNRVHP 307
Query: 290 KDERAQWILDRNQVMNLIRKE 310
++L R+ +++ +E
Sbjct: 308 SRANPNFVLKRDSIVDTFLEE 328
>gi|145544438|ref|XP_001457904.1| hypothetical protein [Paramecium tetraurelia]
gi|124425722|emb|CAK90507.1| unnamed protein product [Paramecium tetraurelia]
Length = 371
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 42/344 (12%)
Query: 3 WTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQS----DPEHGLQTEAGLVYDLAS 58
+T + +E QIE +PGA N F G++ DPE + ++DLAS
Sbjct: 19 FTALDDYVELQIEQKRFPGAVIGIQDGNYQYTFKYGRTEYPGDPEDQALLKTS-IFDLAS 77
Query: 59 VSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDL--DPFIPNRD 116
VSKVVG T LWE G+L+++ V ++PE +P + IR LL H + L D + NR
Sbjct: 78 VSKVVGCTTAAMLLWEQGRLNVEESVQYYVPEFPHPTVRIRHLLLHNSGLPADAPLGNR- 136
Query: 117 LLTAPELKEAMFHLNR-RSQPA--FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWG 173
+ T E+ + ++ + S P +LYSD+ + L ++ERI LDV L + ++KP G
Sbjct: 137 IWTKEEVLDWLYTKSTLLSTPGQKYLYSDLSMVTLQQVIERITETTLDVYLDENIFKPLG 196
Query: 174 MTETKFGP---VELAVPTVRGVEA-------GIVHDPKARLLGRHAGSAGLFSTIKDLQI 223
M T F P ++ +P + E G VHDP A L +G+AGLFST+ DL
Sbjct: 197 MQSTMFNPSADLKYRIPPTQRDEVVRKRLIWGEVHDPTAFYLEGVSGNAGLFSTVYDLLK 256
Query: 224 FLEHYLADD--FARDLNQNFSPLDD-----KERSLAWN-------------LEGDWLDHT 263
F++ L + F + ++ +++ R+L W+ + HT
Sbjct: 257 FMQMMLGKNSLFKYETLLYWTKVEEGLPYANSRALGWDTVPIQTYPPCGSKFSKNSFGHT 316
Query: 264 GYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMNLI 307
GYTGT + +R + L+NR Y D++ + R +V N+I
Sbjct: 317 GYTGTSVWADRDTDLIVVILTNRVY-PDDKTSVVQFRYEVTNII 359
>gi|153175143|ref|ZP_01930538.1| hypothetical protein LMIG_00560 [Listeria monocytogenes FSL N3-165]
gi|133729596|gb|EBA31294.1| hypothetical protein LMIG_00560 [Listeria monocytogenes FSL N3-165]
Length = 335
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 97/327 (29%), Positives = 168/327 (51%), Gaps = 23/327 (7%)
Query: 5 KIIKKIEEQIEAGIYPGASFAYFKDNQWTE---FYLGQSDPEHG-LQTEAGLVYDLASVS 60
K + +++ ++ G PG S+ K N E L PE L +YD+AS++
Sbjct: 4 KTKQSLDQLVQNGSTPGISYQ-IKTNHLEENNIMGLKSVFPEAEILPRTTENIYDIASLT 62
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KV+ T L E + ++ + +LP+ Y ++TI LLTH++ L IPN + T
Sbjct: 63 KVIATTTRILQLIEQQRFQLNDPIQMYLPDFRYNNVTIMHLLTHSSGLAQNIPNFSMNTP 122
Query: 121 PELKEAMFHLNRRSQPAFL--YSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETK 178
++ ++ + + P L Y+D +FLLLG+++ +I + + + +++ + +P MT+T
Sbjct: 123 EDVMRYVYATPQINAPGTLVTYADANFLLLGYLISKI-DGNYETSIQNNILEPLSMTDTS 181
Query: 179 FGPV--ELAVPT----VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIF-----LEH 227
F P + +PT RG+ G VHD KA G AGLFST+ DL F L+H
Sbjct: 182 FHPANKKQVIPTELDQTRGLIQGDVHDFKAWTAKSGTGHAGLFSTLSDLSKFRDALMLQH 241
Query: 228 ---YLADDFARDLNQNFSPLDDKERSLAWNLEGDW-LDHTGYTGTFIMWNRQKQEATIFL 283
L++ + N +P ++ R L W+L G+ L HTG+TGTF++ + + Q + I L
Sbjct: 242 GAPILSEKTWHLMQINHTPGLNRSRGLGWDLRGESVLYHTGFTGTFMVLDLKHQASLIVL 301
Query: 284 SNRTYEKDERAQWILDRNQVMNLIRKE 310
SNR + ++ R+ +++ +E
Sbjct: 302 SNRVHPSRANPNFVDKRDSIVDTFLEE 328
>gi|47096499|ref|ZP_00234091.1| peptidase, putative [Listeria monocytogenes str. 1/2a F6854]
gi|153179969|ref|ZP_01933108.1| hypothetical protein LMMG_00704 [Listeria monocytogenes F6900]
gi|153183403|ref|ZP_01934263.1| hypothetical protein LMOG_00119 [Listeria monocytogenes J0161]
gi|153191416|ref|ZP_01938636.1| hypothetical protein LMPG_00660 [Listeria monocytogenes J2818]
gi|47015152|gb|EAL06093.1| peptidase, putative [Listeria monocytogenes str. 1/2a F6854]
gi|126943694|gb|EBA21411.1| hypothetical protein LMOG_00119 [Listeria monocytogenes J0161]
gi|127765195|gb|EBA25545.1| hypothetical protein LMPG_00660 [Listeria monocytogenes J2818]
gi|133732144|gb|EBA33842.1| hypothetical protein LMMG_00704 [Listeria monocytogenes F6900]
Length = 335
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 95/327 (29%), Positives = 168/327 (51%), Gaps = 23/327 (7%)
Query: 5 KIIKKIEEQIEAGIYPGASFAYFKDNQWTE---FYLGQSDPEHG-LQTEAGLVYDLASVS 60
K + +++ ++ G PG S+ K N E L PE L +YD+AS++
Sbjct: 4 KTKQSLDQLVQNGSTPGISYQ-IKTNHLEENNIMGLKSVFPEAEILPRTTENIYDIASLT 62
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KV+ T L E + ++ + +LP+ Y ++TI LLTH++ L IPN + T
Sbjct: 63 KVIATTTRILQLIEQQRFQLNDPIQMYLPDFRYNNVTIMHLLTHSSGLAQNIPNFSMNTP 122
Query: 121 PELKEAMFHLNRRSQP--AFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETK 178
++ ++ + + P + Y+D +FLLLG+++ +I + + + +++ + +P MT+T
Sbjct: 123 EDVMRYVYATPQINAPGTSVTYADANFLLLGYLISKI-DGNYETSIQNNILEPLSMTDTS 181
Query: 179 FGPV--ELAVPT----VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADD 232
F P + +PT RG+ G VHD KA G AGLFST+ DL F + +
Sbjct: 182 FHPANKKQVIPTELDQTRGLIQGEVHDFKAWTAKSGTGHAGLFSTLSDLSKFRDALMLQL 241
Query: 233 FARDLNQ--------NFSPLDDKERSLAWNLEGDW-LDHTGYTGTFIMWNRQKQEATIFL 283
A L++ N +P ++ R L W+L G+ L HTG+TGTF++ + ++Q + I L
Sbjct: 242 GAPILSEKTWQLMQINHTPGLNRSRGLGWDLRGESVLYHTGFTGTFMVLDLKRQASLIVL 301
Query: 284 SNRTYEKDERAQWILDRNQVMNLIRKE 310
SNR + ++ R+ +++ +E
Sbjct: 302 SNRVHPSRANPNFVDKRDSIVDTFIEE 328
>gi|21220752|ref|NP_626531.1| secreted esterase [Streptomyces coelicolor A3(2)]
gi|6469268|emb|CAB61729.1| possible secreted esterase [Streptomyces coelicolor A3(2)]
Length = 351
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 99/278 (35%), Positives = 136/278 (48%), Gaps = 39/278 (14%)
Query: 54 YDLASVSKV-VGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
+DLAS++K+ V V E G L ID V +LP+ + +T+RQLLTH + L
Sbjct: 64 FDLASLTKLFTAVAAVQQI--ERGTLGIDAEVGAYLPDFRAAAEHRVTVRQLLTHTSGLR 121
Query: 110 PFIPNRDLLTAPELKEAMFHLNRRSQP-----AFLYSDVHFLLLGFILERIFNQDLDVIL 164
P +P D + KEA R P + YSD++ LLL +LERI + LDV++
Sbjct: 122 PELPLYDSGAFAD-KEARLRRLRAEPPVGVPGTYCYSDLNMLLLQQVLERITGRGLDVLV 180
Query: 165 KDQVWKPWGMTETKFGPVELAVPTV----------RGVEAGIVHDPKARLLGRHAGSAGL 214
+D + +P GMT T FGP A T RG+ G+VHD A LG AG AGL
Sbjct: 181 RDGITRPLGMTATGFGPCPGAAATEDQRRPWAKADRGMLRGVVHDENAWALGGVAGHAGL 240
Query: 215 FSTIKDLQIFLEHYLADDF---ARDLNQNFSPLDDKERSLAWNLEGDWL----------D 261
FST +DL +F LA AR L +F L E L + L+ W
Sbjct: 241 FSTGRDLAVFCRTLLAGGSHGPARILGPDFVELLLAEPGLGFALDQPWFMGELAGRGAAG 300
Query: 262 HTGYTGTFIMWNRQKQEATIFLSNRTYEK----DERAQ 295
HTG+TGT ++ +R I L+N + + D RA+
Sbjct: 301 HTGFTGTMLVLDRVTDTFAILLANTVHPRRRAPDNRAR 338
>gi|47093833|ref|ZP_00231578.1| peptidase, putative [Listeria monocytogenes str. 4b H7858]
gi|153202909|ref|ZP_01944347.1| hypothetical protein LMSG_01123 [Listeria monocytogenes HPB2262]
gi|47017800|gb|EAL08588.1| peptidase, putative [Listeria monocytogenes str. 4b H7858]
gi|133734979|gb|EBA36677.1| hypothetical protein LMSG_01123 [Listeria monocytogenes HPB2262]
Length = 335
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 83/275 (30%), Positives = 148/275 (53%), Gaps = 18/275 (6%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFI 112
+YD+AS++KV+ T L E + ++ + +LP+ Y ++TI LLTH++ L I
Sbjct: 55 IYDIASLTKVIATTTRILQLIEQQRFQLNDPIQMYLPDFRYNNVTILHLLTHSSGLAQNI 114
Query: 113 PNRDLLTAPELKEAMFHLNRRSQPAFL--YSDVHFLLLGFILERIFNQDLDVILKDQVWK 170
PN + ++ ++ + + P + Y+D +FLLLG+++ ++ + + + +++ + +
Sbjct: 115 PNFSMNNREDVIRYVYATPQINIPGTVVTYADANFLLLGYLISKM-DGNYEKAIQNNILE 173
Query: 171 PWGMTETKFGPV--ELAVPT----VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIF 224
P MT T F P + +PT RG+ G VHD KA G AGLFST+ DL F
Sbjct: 174 PLSMTNTSFHPANKKQVIPTELDQTRGLIQGDVHDFKAWTAKSGTGHAGLFSTLSDLSKF 233
Query: 225 -----LEH---YLADDFARDLNQNFSPLDDKERSLAWNLEGDW-LDHTGYTGTFIMWNRQ 275
L+H L++ + + N +P ++ R L W+L GD L HTG+TGTF++ + +
Sbjct: 234 RDALMLQHGAPILSEKTWQLMQINHTPGLNRSRGLGWDLRGDSVLYHTGFTGTFMVLDLK 293
Query: 276 KQEATIFLSNRTYEKDERAQWILDRNQVMNLIRKE 310
Q + I LSNR + ++ R+ +++ +E
Sbjct: 294 HQASLIVLSNRVHPSRANPNFVDKRDSIVDTFLEE 328
>gi|46908149|ref|YP_014538.1| peptidase, putative [Listeria monocytogenes str. 4b F2365]
gi|46881419|gb|AAT04715.1| putative peptidase [Listeria monocytogenes str. 4b F2365]
Length = 335
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 83/275 (30%), Positives = 148/275 (53%), Gaps = 18/275 (6%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFI 112
+YD+AS++KV+ T L E + ++ + +LP+ Y ++TI LLTH++ L I
Sbjct: 55 IYDIASLTKVIATTTRILQLIEQQRFQLNDPIQMYLPDFRYNNVTILHLLTHSSGLAQNI 114
Query: 113 PNRDLLTAPELKEAMFHLNRRSQPAFL--YSDVHFLLLGFILERIFNQDLDVILKDQVWK 170
PN + ++ ++ + + P + Y+D +FLLLG+++ ++ + + + +++ + +
Sbjct: 115 PNFSMNNREDVIRYVYATPQINIPGTVVTYADANFLLLGYLISKM-DGNYEKAIQNNILE 173
Query: 171 PWGMTETKFGPV--ELAVPT----VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIF 224
P MT T F P + +PT RG+ G VHD KA G AGLFST+ DL F
Sbjct: 174 PLSMTNTSFHPANKKQVIPTELDQTRGLIQGDVHDFKAWTAKSGTGHAGLFSTLSDLSKF 233
Query: 225 -----LEH---YLADDFARDLNQNFSPLDDKERSLAWNLEGDW-LDHTGYTGTFIMWNRQ 275
L+H L++ + + N +P ++ R L W+L GD L HTG+TGTF++ + +
Sbjct: 234 RDTLMLQHGAPILSEKTWQLMQINHTPGLNRSRGLGWDLRGDSVLYHTGFTGTFMVLDLK 293
Query: 276 KQEATIFLSNRTYEKDERAQWILDRNQVMNLIRKE 310
Q + I LSNR + ++ R+ +++ +E
Sbjct: 294 HQASLIVLSNRVHPSRANPNFVDKRDSIVDTFLEE 328
>gi|16803955|ref|NP_465440.1| hypothetical protein lmo1916 [Listeria monocytogenes EGD-e]
gi|16411369|emb|CAC99994.1| lmo1916 [Listeria monocytogenes]
Length = 335
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 94/327 (28%), Positives = 167/327 (51%), Gaps = 23/327 (7%)
Query: 5 KIIKKIEEQIEAGIYPGASFAYFKDNQWTE---FYLGQSDPEHG-LQTEAGLVYDLASVS 60
K + +++ ++ G PG S+ K N E L PE L +YD+AS++
Sbjct: 4 KTKQSLDQLVQNGSTPGISYQ-IKTNHLEENNIMGLKSVFPEAEILPRTTENIYDIASLT 62
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KV+ T L E + ++ + +LP+ Y ++TI LLTH++ L IPN +
Sbjct: 63 KVIATTTRILQLIEQQRFQLNDPIQVYLPDFQYNNVTILHLLTHSSGLAQNIPNFSMNNR 122
Query: 121 PELKEAMFHLNRRSQPAFL--YSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETK 178
++ ++ + + P + Y+D +FLLLG+++ ++ + + + +++ + +P MT T
Sbjct: 123 EDVMRYVYATPQINTPGTVVTYADANFLLLGYLISKL-DGNYEKAIQNNILEPLIMTNTS 181
Query: 179 FGPV--ELAVPT----VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADD 232
F PV + +PT RG+ G VHD KA G AGLFST+ DL F + +
Sbjct: 182 FHPVNKKQVIPTELDQTRGLIQGEVHDFKAWTAKSGTGHAGLFSTLSDLSKFRDALMLQL 241
Query: 233 FARDLNQ--------NFSPLDDKERSLAWNLEGDW-LDHTGYTGTFIMWNRQKQEATIFL 283
A L++ N +P ++ R L W+L G+ L HTG+TGTF++ + ++Q + I L
Sbjct: 242 GAPILSEKTWQLMQINHTPGLNRSRGLGWDLRGESVLYHTGFTGTFMVLDLKRQASLIVL 301
Query: 284 SNRTYEKDERAQWILDRNQVMNLIRKE 310
SNR + ++ R+ +++ +E
Sbjct: 302 SNRVHPSRANPNFVDKRDSIVDTFIEE 328
>gi|29375091|ref|NP_814244.1| hypothetical protein EF0460 [Enterococcus faecalis V583]
gi|29342550|gb|AAO80315.1| conserved hypothetical protein [Enterococcus faecalis V583]
Length = 329
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 89/324 (27%), Positives = 155/324 (47%), Gaps = 21/324 (6%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFY---LGQSDPEHGLQTEAGLVYDLA 57
M I + I+ I + PG ++ ++ +E Y LG + P + + +YDLA
Sbjct: 1 MNQIAIQETIQRLINQQVVPGVAWGTITEDSLSEQYTGFLGNTGPFARQKISSASLYDLA 60
Query: 58 SVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDL 117
S++KV+G L + QL V + LP+ +I +LL H + L + ++
Sbjct: 61 SLTKVIGTTNRMLQLIDTNQLTFSTTVGEILPDYQGLSCSIGELLLHQSGLPADVVDKKN 120
Query: 118 LTAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTET 177
+T L+E + + + YSD+ + LLG I++ + L+ + V++P + T
Sbjct: 121 VTKKSLQEIILTHSLSERGKTTYSDLGYYLLGEIIQVLDRCSLEESFQTYVFQPMNLQHT 180
Query: 178 KFGPVEL--AVPT----VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLAD 231
F + AVPT RGV G+VHD KA L GSAGLF+T+ DL F++ ++ +
Sbjct: 181 SFTVSDFAQAVPTEITKQRGVIQGVVHDSKAYQLKAPIGSAGLFATLPDLLTFVQCFMNN 240
Query: 232 D-------FARDLNQNFSPLDDKERSLAWNLE-----GDWLDHTGYTGTFIMWNRQKQEA 279
F+ + ++ R+ W ++ D+L HTG+TGT I ++ +EA
Sbjct: 241 RYPSGKPLFSEKMFTALWSMNQGGRTFGWEVKKTQAGADYLYHTGFTGTAIGMKKETKEA 300
Query: 280 TIFLSNRTYEKDERAQWILDRNQV 303
I L+NR + E ++ R ++
Sbjct: 301 LILLTNRIHPTREERGFLKARTKI 324
>gi|29832461|ref|NP_827095.1| beta-lactamase [Streptomyces avermitilis MA-4680]
gi|29609580|dbj|BAC73630.1| putative beta-lactamase [Streptomyces avermitilis MA-4680]
Length = 349
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 92/269 (34%), Positives = 134/269 (49%), Gaps = 30/269 (11%)
Query: 54 YDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDP 110
+DLAS++K+ L E G L ID V +LPE + IT+RQLLTH + L P
Sbjct: 64 FDLASLTKLFTAVAAMQQL-ERGTLGIDARVAAYLPEFRAAAQHGITVRQLLTHTSGLRP 122
Query: 111 FIPNRDLLTAPELKEAMFHLNR-RSQPA-FLYSDVHFLLLGFILERIFNQDLDVILKDQV 168
+P D + + A+ H S+P + YSD++ LLL ++LERI + LDV+++D +
Sbjct: 123 ELPLYDC-PSDAARLALLHAEPPTSEPGTYRYSDLNMLLLQYVLERITGRSLDVLVRDGI 181
Query: 169 WKPWGMTETKFGPVELAVPTV----------RGVEAGIVHDPKARLLGRHAGSAGLFSTI 218
+P GMT T FGP A T RG+ G+VHD A LG AG AGLF+T
Sbjct: 182 TRPLGMTATGFGPCPGAAATEDQRRPWAKADRGMLRGVVHDENAWALGGVAGHAGLFATA 241
Query: 219 KDLQIFLEHYLADDF---ARDLNQNFSPLDDKERSLAWNLEGDW----------LDHTGY 265
+DL +F LA AR L +F L L + ++ W + HTG+
Sbjct: 242 RDLAVFCRTLLAGGSYGPARILGPDFVELMLAPPGLGFAIDQPWFMGALACRGAVGHTGF 301
Query: 266 TGTFIMWNRQKQEATIFLSNRTYEKDERA 294
TGT ++ + + L+N + + A
Sbjct: 302 TGTSLVLDPATDTFLVLLANTVHPRRRPA 330
>gi|153196423|ref|ZP_01940793.1| hypothetical protein LMRG_01063 [Listeria monocytogenes 10403S]
gi|127633884|gb|EBA23276.1| hypothetical protein LMRG_01063 [Listeria monocytogenes 10403S]
Length = 335
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 93/327 (28%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 5 KIIKKIEEQIEAGIYPGASFAYFKDNQWTE---FYLGQSDPEHG-LQTEAGLVYDLASVS 60
K + +++ ++ G PG S+ K N E L PE L +YD+AS++
Sbjct: 4 KTKQSLDQLVQNGSTPGISYQ-IKTNHLEENNIMGLKSVFPEAEILPRTTENIYDIASLT 62
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
KV+ T L E + ++ + +LP+ Y ++TI LLTH++ L IPN +
Sbjct: 63 KVIATTTRILQLIEQQRFQLNDPIQVYLPDFQYNNVTILHLLTHSSGLAQNIPNFSMNNR 122
Query: 121 PELKEAMFHLNRRSQPAFL--YSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETK 178
++ ++ + + P + Y+D +FLLLG+++ ++ + + + +++ + +P MT T
Sbjct: 123 EDVMRYVYATPQINTPGTVVTYADANFLLLGYLISKL-DGNYEKAIQNNILEPLIMTNTS 181
Query: 179 FGPV--ELAVPT----VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADD 232
F P + +PT RG+ G VHD KA G AGLFST+ DL F + +
Sbjct: 182 FHPANKKQVIPTELDQTRGLIQGEVHDFKAWTAKSGTGHAGLFSTLSDLSKFRDALMLQL 241
Query: 233 FARDLNQ--------NFSPLDDKERSLAWNLEGDW-LDHTGYTGTFIMWNRQKQEATIFL 283
A L++ N +P ++ R L W+L G+ L HTG+TGTF++ + ++Q + I L
Sbjct: 242 GAPILSEKTWQLMQINHTPGLNRSRGLGWDLRGESVLYHTGFTGTFMVLDLKRQASLIVL 301
Query: 284 SNRTYEKDERAQWILDRNQVMNLIRKE 310
SNR + ++ R+ +++ +E
Sbjct: 302 SNRVHPSRANPNFVDKRDSIVDTFIEE 328
>gi|116630390|ref|YP_819543.1| Beta-lactamase class C or other penicillin binding protein
[Lactobacillus gasseri ATCC 33323]
gi|116095972|gb|ABJ61124.1| Beta-lactamase class C or other penicillin binding protein
[Lactobacillus gasseri ATCC 33323]
Length = 338
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 103/311 (33%), Positives = 149/311 (47%), Gaps = 26/311 (8%)
Query: 20 PGASFAY--FKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQ 77
PG S+A K+ +LG + + + G VYDLAS++KVVGV + L
Sbjct: 21 PGISYALEDIKNKIVETSFLGYKTYDKEIPLKDGDVYDLASLTKVVGVTSRILQLLGKKI 80
Query: 78 LDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPN-RDLLTAPELKEAMFH--LNRRS 134
+D+D V + P+ YPDITI+ LL H + L + N E+ +A+F L +
Sbjct: 81 IDLDDKVSKYFPQISYPDITIKNLLLHNSGLAADLSNVYSYANKDEVIDAIFKQKLIYPT 140
Query: 135 QPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF---GPVELAVPT--- 188
+YSD++F+LLG I+E++ + LD LK V++P M T + + VPT
Sbjct: 141 GTDMIYSDLNFILLGMIIEKVDKESLDESLKVHVFEPLKMNSTGYCLNKNKQDFVPTEKT 200
Query: 189 -VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLDDK 247
RG+ G VHD A +L +G+AGLFSTI DL+ F YL +D + P D
Sbjct: 201 DQRGLIQGEVHDETAYMLNGVSGNAGLFSTIGDLKKFCIMYLQKGRYKD--KTIIPSDII 258
Query: 248 E---------RSLA---WNLEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQ 295
R+L WN L HTG+TGT I + I L+NR +
Sbjct: 259 NVLFKYNFMGRTLGWQRWNKNSKTLWHTGFTGTSIALDLDHSTFFICLTNRVNPTRRNQK 318
Query: 296 WILDRNQVMNL 306
WI R ++L
Sbjct: 319 WINVRRLAVSL 329
>gi|87306383|ref|ZP_01088530.1| putative esterase [Blastopirellula marina DSM 3645]
gi|87290562|gb|EAQ82449.1| putative esterase [Blastopirellula marina DSM 3645]
Length = 384
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 108/329 (32%), Positives = 153/329 (46%), Gaps = 52/329 (15%)
Query: 4 TKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYL---GQSDPEHGLQ-TEAGLVYDLASV 59
+KI K++E +EA PG A + Q YL G E ++ + V+D+AS+
Sbjct: 39 SKIASKVQEALEAKKMPGCVVAIAR--QGKVVYLQAFGNRQIEPSVEPMKVDSVFDMASL 96
Query: 60 SKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIPNRD 116
+K + T L E G++D+D V+ +L E IT+RQLL H + L P RD
Sbjct: 97 TKPIVTATCIMQLVEAGKIDLDAPVLQYLSEFRGHGKEAITVRQLLIHVSGLTPDNALRD 156
Query: 117 LLTAPELKEA-MFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWG 173
A + L S+P F YSDV FLLLG I++R+ Q LD K +++P G
Sbjct: 157 YDNGWSAAYAKICDLTLLSEPGKQFRYSDVGFLLLGEIVKRVSTQPLDEYAKQHIFQPLG 216
Query: 174 MTETKFGP----VELAVPT--VRGV-EAGIVHDPKARLLGRHAGSAGLFSTIKDL----- 221
M ET F P E AV T V GV G+VHDP+A G AG AGLFST +DL
Sbjct: 217 MEETGFNPPAGLQERAVTTTQVDGVWLQGVVHDPRANRCGGVAGHAGLFSTAEDLLVYAQ 276
Query: 222 ----------QIFLEHYLADDFARDLNQNFSPLDDKERSLAWNLEGDW------------ 259
I L H L+ + +++ D R L W+ +
Sbjct: 277 AMLDARSEAGSILLPHTLS-----QMTRSYDAAGDV-RGLGWDKRSAYSRNRGKTMSNAA 330
Query: 260 LDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
H G+TGT + + ++ +FLSNR +
Sbjct: 331 YGHGGFTGTSLWIDPEQDLVVLFLSNRVH 359
>gi|116873351|ref|YP_850132.1| hypothetical protein lwe1935 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742229|emb|CAK21353.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 334
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 84/275 (30%), Positives = 146/275 (53%), Gaps = 18/275 (6%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFI 112
+YD+AS++KV+ T L E QL ++ V +L + + D+TI LLTH++ L I
Sbjct: 55 IYDIASLTKVIATTTRILQLVEQQQLQLEDPVQSYLSDFRFDDVTILHLLTHSSGLAQNI 114
Query: 113 PNRDLLTAPELKEAMFHLNR--RSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWK 170
PN + T ++K ++ + S Y+D +FLLLG+++ ++ + + + ++ + +
Sbjct: 115 PNFLMETKEDVKRYVYATPQINPSGTNVTYADANFLLLGYLINQL-DGNYEQSIQKNILE 173
Query: 171 PWGMTETKFGPV--ELAVPT----VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIF 224
P MT + F P +PT RG+ G HD KA + + G AGLFST+ DL F
Sbjct: 174 PLQMTHSNFHPTNKNQVIPTELDQKRGLIQGEAHDFKAWIAKSNTGHAGLFSTLADLSKF 233
Query: 225 LEHY--------LADDFARDLNQNFSPLDDKERSLAWNLEGDW-LDHTGYTGTFIMWNRQ 275
+ L++ + + N +P ++ R L W+L GD L HTG+TGTF++ + +
Sbjct: 234 RDALILQNGSPILSEKTVQLMQTNHTPGLNRTRGLGWDLHGDSVLYHTGFTGTFMVLDLK 293
Query: 276 KQEATIFLSNRTYEKDERAQWILDRNQVMNLIRKE 310
Q + I LSNR + ++L R ++++ +E
Sbjct: 294 HQASLIVLSNRVHPSRANPNFVLKRESIVDVFLEE 328
>gi|118376842|ref|XP_001021603.1| beta-lactamase family protein [Tetrahymena thermophila SB210]
gi|89303369|gb|EAS01357.1| beta-lactamase family protein [Tetrahymena thermophila SB210]
Length = 411
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 100/342 (29%), Positives = 154/342 (45%), Gaps = 59/342 (17%)
Query: 3 WTKIIKKIEEQIEAGIYPGASFA-YFKDNQWTEFYLG-QSDPEHGLQTEAG--LVYDLAS 58
W+ + + I+ PG + + Y+K+ LG Q+ P +YD+AS
Sbjct: 46 WSSFYQIADVFIQNRTTPGLTVSVYYKNQSIFSAALGNQTYPGDAFNIPVNNETIYDIAS 105
Query: 59 VSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDP----- 110
+SKV GV L++ G + +D LVI ++PE D +ITIR LL H + L P
Sbjct: 106 LSKVFGVTAATMRLYDQGLIGLDDLVITYIPEFNNHDKANITIRNLLLHNSGLQPDLDFS 165
Query: 111 FIPNRDLLTAPELKEAMFHLNRR--SQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQV 168
P L+ + +K+A++H+ + + ++YSD++ ++L +++RI LDV LK V
Sbjct: 166 LFPQSTLIPS-NIKDAIYHIELQYPTGTQYVYSDLNMVILQEVVQRITKISLDVFLKLNV 224
Query: 169 WKPWGMTETKFGPVELAVPTVRGVE----------AGIVHDPKARLLGRHAGSAGLFSTI 218
+ P M T F P L V + E GIVHD A LG +G+AG+FST
Sbjct: 225 YGPLEMDSTMFNPSPLYVHKIAPTEFDDVYRHELCHGIVHDETAWFLGGVSGNAGIFSTA 284
Query: 219 KDLQIFLEHYLADDFARDLNQN------FSP-----LDDKE--------RSLAWN----- 254
DL F+ L + +N F P KE R+L W+
Sbjct: 285 NDLAKFMNMML--NRGEYINSKGKRVKIFEPETVDLFTTKETNVPYPNSRALGWDTVPIQ 342
Query: 255 --------LEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
HTG+TGT +++K A + L+NR Y
Sbjct: 343 SVLPCGTKFSPLSFGHTGFTGTTAWADKEKDLAIVILANRVY 384
>gi|89095929|ref|ZP_01168823.1| beta-lactamase [Bacillus sp. NRRL B-14911]
gi|89089675|gb|EAR68782.1| beta-lactamase [Bacillus sp. NRRL B-14911]
Length = 575
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 94/329 (28%), Positives = 149/329 (45%), Gaps = 53/329 (16%)
Query: 10 IEEQIEAGIYPGASF------------AYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLA 57
+EE I++ + PGA AY Q+ + L ++D + + ++DLA
Sbjct: 95 MEEMIDSRVMPGAVALVARRGHIVKHEAYGMAYQYKDDGLTEADQPISMAKDT--IFDLA 152
Query: 58 SVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIPN 114
S+SK+ T L+E G ++D V D+LPE ++TIRQL+TH + +IP
Sbjct: 153 SISKIFTT-TAAMQLYEKGLFNLDDPVADYLPEFAAGGKEEVTIRQLMTHTSGFTAWIPL 211
Query: 115 RDLLTAPELKEAM---FHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKP 171
+ E + ++ + L + YSD++ + LG ++E++ + LD ++D + KP
Sbjct: 212 YSQGNSREDRISIALQYPLANEPGSTYTYSDLNMIALGALIEKLSGKRLDEYVRDHITKP 271
Query: 172 WGMTETKFGPVELAVPTV----------RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDL 221
GM +T + P E + RG+ G VHD A L AG AG+FST DL
Sbjct: 272 LGMKDTMYNPPESLKDRIAATEYQPALGRGLVWGEVHDENAWSLDGVAGHAGVFSTAGDL 331
Query: 222 QIFLEHY-----------LADDFARDLNQNFSP-LDDKERSLAWNLEGDW---------- 259
F Y L + R L +N P + L W L W
Sbjct: 332 AKFAHMYVNEGTYGGKRILKKETVRTLTENQIPQFPGDDHGLGWELNQGWLGDALTDKDS 391
Query: 260 LDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L HTGYTGT ++ +++ I L+NR +
Sbjct: 392 LSHTGYTGTSVVISQKNDTIAILLTNRVH 420
>gi|20806739|ref|NP_621910.1| Beta-lactamase class C and other penicillin binding proteins
[Thermoanaerobacter tengcongensis MB4]
gi|20515196|gb|AAM23514.1| Beta-lactamase class C and other penicillin binding proteins
[Thermoanaerobacter tengcongensis MB4]
Length = 355
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 102/352 (28%), Positives = 166/352 (47%), Gaps = 57/352 (16%)
Query: 2 KWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDP----EHGLQTEAGLVYDLA 57
K K +++ IE G++PG + A D + + + + L E+ ++DLA
Sbjct: 7 KLEKAFMLLDKGIEEGVFPGVAAAVGDDKGFVRVEVKGNKRLYPYDEKLNRES--LFDLA 64
Query: 58 SVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLP--ESDYPD-ITIRQLLTHATDLDPFIP- 113
S++KVV + + E G + + V +++P + D D ITI QLLTH + L ++P
Sbjct: 65 SLTKVVATTMLLMKMLESGLISVYDRVSEYIPNFKGDGKDKITIFQLLTHTSGLPAYLPF 124
Query: 114 ---NRDLLTAPEL--KEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQV 168
+D L + +E + N+ + YSD++F+LLG ILE + LD + +V
Sbjct: 125 YEKCKDYLDSINYICEEVKLNPNKNVE----YSDLNFILLGRILEILGGNRLDTLCHKEV 180
Query: 169 WKPWGMTETKFGPV-------ELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDL 221
++P GM +T F P+ EL T + +E G+ HD AR G +G AGLFSTI DL
Sbjct: 181 FEPLGMKDTMFNPIGKDVVPTELDKTTGKVIE-GVCHDENARFFGGVSGHAGLFSTIDDL 239
Query: 222 ---------------QIFLEHYLADDFARDLNQNFSPLDDKERSLAWNLEG--------- 257
++FL + L F R + N++P ++ R W ++G
Sbjct: 240 VKFATMLINFGRVREEVFLSYPL---FIRMIT-NYTPNSEENRGWGWVIKGHTAFGGDLF 295
Query: 258 --DWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMNLI 307
HTG+TGT I + + + I L+NR + E + I R N +
Sbjct: 296 SEKAFGHTGFTGTSIWVDPEYKVFMILLTNRVHPTRENVKIIRFRRLFHNAV 347
>gi|116496195|ref|YP_807929.1| Beta-lactamase class C related penicillin binding protein
[Lactobacillus casei ATCC 334]
gi|116106345|gb|ABJ71487.1| Beta-lactamase class C related penicillin binding protein
[Lactobacillus casei ATCC 334]
Length = 340
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 98/330 (29%), Positives = 153/330 (46%), Gaps = 33/330 (10%)
Query: 2 KWTKIIKKIEEQIEAGIYPGASFAYF--KDNQWTEF-YLGQSDPEHGLQTEAGLVYDLAS 58
K T ++ + + I G G S++ ++N Y G D L +A YDLAS
Sbjct: 5 KQTALLPTVNQAITDGAVFGVSYSLLGPQENALHVIGYQGAGDDRLPLLPQAR--YDLAS 62
Query: 59 VSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLL 118
++KVVG T L G+L++ + + + YP +TI QL+ H + L +P+ L
Sbjct: 63 LTKVVGTTTRLLQLLIAGKLELTQPIGSLVSGLRYPQLTIEQLMLHRSGLPADVPDAHAL 122
Query: 119 TAPELKEAMFHLNRRSQP--AFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTE 176
L A+ + + P +YSD+++++LG+ + + + DL L ++ P GM
Sbjct: 123 DQAGLVHAVKTMAAVAAPDTETIYSDLNYIILGWAIAAL-DGDLATSLTQHIFAPLGMHA 181
Query: 177 TKFGPVELA---------VPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEH 227
T + P +A VP G+ G VHD KA LL +G AGLF+T+ DL IF
Sbjct: 182 TGYRPQHVAAADFVPTENVPARGGIIRGTVHDHKAFLLDGVSGHAGLFATLADLTIF-TR 240
Query: 228 YLADDFARDLNQNFSP----LDDK----ERSLAWNLEGD-----WLDHTGYTGTFIMWNR 274
LA + + P L D+ R+L W W HTG+TGT I ++R
Sbjct: 241 LLAGLPVTNGDHVLPPAAFVLLDRFCKGGRTLGWRCWAQGRHQYW--HTGFTGTSIAFDR 298
Query: 275 QKQEATIFLSNRTYEKDERAQWILDRNQVM 304
Q + L+NR Y W+ R Q++
Sbjct: 299 DTQCGFVCLTNRIYPSRANRAWLAVRRQLL 328
>gi|72160624|ref|YP_288281.1| putative secreted esterase [Thermobifida fusca YX]
gi|71914356|gb|AAZ54258.1| putative secreted esterase [Thermobifida fusca YX]
Length = 339
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 91/280 (32%), Positives = 131/280 (46%), Gaps = 28/280 (10%)
Query: 14 IEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEA-GLVYDLASVSKVVGVGTVCTFL 72
++ G PG W +G+ E G A YD A ++KV+ +
Sbjct: 22 VDVGWLPGGVAVVGSGEVWENVAVGRVGVECGEAVAAPDTRYDAAELTKVMATWPLVGQA 81
Query: 73 WEIGQLDIDRLVIDFLPESDYP--DITIRQLLTHATDLDPFI-PNRDLLTAPELKEAMFH 129
G LD+D + + P S YP +TIRQ+LT+ L P R + T L EA+
Sbjct: 82 IADGLLDLDAPMAHYFPGS-YPGSKVTIRQILTYTCRLSPVTWLERYVGTDQPLAEAIL- 139
Query: 130 LNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELA---V 186
+ +P + +D F+LLG +LER+ Q LD + D +W+ G++ T++GP+ +
Sbjct: 140 VEELEKPGYCVTDRGFILLGLLLERVRRQSLDQLATD-LWRHMGLSATRYGPLPRSPSVA 198
Query: 187 PTVRGVEA-----GIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLA----------- 230
PT R + G+VHD A L+G AG AG+F+TI DL IF LA
Sbjct: 199 PTERRIPGAPATWGVVHDENAALMGGVAGHAGVFTTIIDLGIFARELLAWHAGEHGTAQL 258
Query: 231 DDFARDLNQNFSPLDDK-ERSLAWNLEGDWL-DHTGYTGT 268
F R P+DD+ R LAW + D L H G TGT
Sbjct: 259 TGFVRQSWLPHQPVDDRFARGLAWKVTDDGLVYHNGSTGT 298
>gi|116622732|ref|YP_824888.1| Uncharacterised conserved protein UCP016719 [Solibacter usitatus
Ellin6076]
gi|116225894|gb|ABJ84603.1| Uncharacterised conserved protein UCP016719 [Solibacter usitatus
Ellin6076]
Length = 776
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 92/321 (28%), Positives = 148/321 (46%), Gaps = 43/321 (13%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ--WTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGT 67
I + IE G PGA D + + + Y ++ V+D AS++KV+
Sbjct: 30 INQAIEQGKMPGAVLLVGHDGKVVFRKAYGKRALVPQPEAMTVDTVFDCASLTKVIATTA 89
Query: 68 VCTFLWEIGQLDIDRLVIDFLPE--SDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKE 125
L++ G+ + V D++PE +IT+R+LLTH + L P +P ++ +
Sbjct: 90 SLMKLFDEGKFRLSDKVTDYIPEFQGGKSEITLRELLTHFSGLQPDVPLKEPWAGYQTGI 149
Query: 126 AMFHLNRRSQPA---FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPV 182
+ + + P ++YSD++F+LLG I+ R+ Q L+ ++ ++ P GM E+ F P
Sbjct: 150 KLATTFKPADPPGVRYVYSDINFILLGEIVHRLSGQMLNEYARENIFLPIGMKESMFQPP 209
Query: 183 ELAVPTVRGVE----------AGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADD 232
VP + E G+VHDP AR +G AG AGLFST DL F + L +
Sbjct: 210 ASLVPRIAPTERWPVRIGPPLRGVVHDPTARNMGGVAGHAGLFSTADDLARFAQMML-NG 268
Query: 233 FARDLNQNFSPLD-DK------------ERSLAWNLE-------GDWL-----DHTGYTG 267
D + FSPL DK R L W+++ G+ HTG+TG
Sbjct: 269 GELDGVRLFSPLTVDKFIEPQTPPDQAVLRGLGWDVDSPHSGNRGELFPIGSYGHTGFTG 328
Query: 268 TFIMWNRQKQEATIFLSNRTY 288
T + + + I L+N +
Sbjct: 329 TSMWIDPSTKTYVILLANSVH 349
>gi|110601825|ref|ZP_01389992.1| Beta-lactamase [Geobacter sp. FRC-32]
gi|110547476|gb|EAT60735.1| Beta-lactamase [Geobacter sp. FRC-32]
Length = 362
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 83/271 (30%), Positives = 129/271 (47%), Gaps = 33/271 (12%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
V+DLAS++KV+ L + G++ + + + PE +D D TI LLTH + L
Sbjct: 82 VFDLASLTKVIATTPAVMKLLDQGKISLLDPLTRWFPEFVGTDREDATILNLLTHTSGLR 141
Query: 110 PF-IPNRDLLTAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQV 168
F + + D + A + A + R +F Y+D++F+LLG ++ R+ + LDV D++
Sbjct: 142 DFDLSSGDAMKAAINRAAAEKTHSRPGTSFNYADINFILLGELVHRVSGKTLDVFCHDEL 201
Query: 169 WKPWGMTETKFGP----VELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIF 224
+ P G + T F P ++ PT+ G G+V D AR LG AG AGLFS+ DL F
Sbjct: 202 FAPLGNSATMFLPPREMTDVIAPTL-GFTGGVVQDMNARRLGGVAGHAGLFSSGNDLARF 260
Query: 225 LEHYLADDF--------ARDLNQNFSPLDDKE----RSLAWNLEGDW------------L 260
L R +NQ +P R L W++E +
Sbjct: 261 ARLILGSGTIEGKRVLSERVVNQMTAPYFYSNGRVVRGLGWDIESPFSAPKGSLFSEVSF 320
Query: 261 DHTGYTGTFIMWNRQKQEATIFLSNRTYEKD 291
HTGY+G+ I + Q+ I L+NR +D
Sbjct: 321 GHTGYSGSSIWIDPQQDLFVIVLTNRLNYRD 351
>gi|67939162|ref|ZP_00531672.1| Beta-lactamase [Chlorobium phaeobacteroides BS1]
gi|67914628|gb|EAM63966.1| Beta-lactamase [Chlorobium phaeobacteroides BS1]
Length = 379
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 145/320 (45%), Gaps = 44/320 (13%)
Query: 10 IEEQIEAGIYPGASFAY-FKDNQWTEFYLGQ-SDPEHGLQTEAGLVYDLASVSKVVGVGT 67
++ I G++P AS A +KD G+ + + VYDLAS++K +
Sbjct: 36 MKHSIADGVFPSASIAVIYKDKVVFHKAFGRLTYSRSSSPVDTSTVYDLASLTKPLVTTA 95
Query: 68 VCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIPNRDLLTA---- 120
+ L E LDID V ++PE + ++TI+ LL H + L I +R +T
Sbjct: 96 IIMQLSERDSLDIDAPVSRYIPEFARNGKENVTIKNLLLHNSGL---IAHRFFITTCGTP 152
Query: 121 PELKEAMFHLNRRSQP--AFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETK 178
E+ +A+++ S P + YSD+ F+ LG ++E++ ++L+ + +P M T
Sbjct: 153 EEVMQAIYNEKLLSSPGASTSYSDLGFITLGKVIEQVTGKNLEDNFHARFSQPLAMNSTL 212
Query: 179 FGPVELAVPTVRGVEAG----------IVHDPKARLLGRHAGSAGLFSTIKDLQIFL--- 225
F P P + E +VHD A LLG AG AGLFST DL +F
Sbjct: 213 FNPSSSLRPGIPPTEEDTRWTIRKPRPLVHDHNAALLGGIAGHAGLFSTTGDLAVFATML 272
Query: 226 ----EHYLADDFARDLNQNFSPLDDKERSLAWNLE--------GDWLD-----HTGYTGT 268
E+ A F + F+ R+L W+L GD+ H GYTGT
Sbjct: 273 MQEGEYNGARYFKPSTLRKFTERYPGSRALGWDLRSLNGRSSSGDYFSPDSYGHLGYTGT 332
Query: 269 FIMWNRQKQEATIFLSNRTY 288
I + QK A I L+NR Y
Sbjct: 333 SIWIDPQKDLAVIALTNRVY 352
>gi|118035447|ref|ZP_01506855.1| Uncharacterised conserved protein UCP016719 [Burkholderia
phytofirmans PsJN]
gi|117993710|gb|EAV08000.1| Uncharacterised conserved protein UCP016719 [Burkholderia
phytofirmans PsJN]
Length = 801
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 102/335 (30%), Positives = 148/335 (44%), Gaps = 56/335 (16%)
Query: 13 QIEAGIYPGASFAYFKDN--QWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCT 70
QIEAG PGA N Q+ + + + H V+DLAS++KV+ T
Sbjct: 62 QIEAGRLPGAVVITGDANEVQYRQAFGRRMIEPHQEAMTVDTVFDLASLTKVIATTTAIM 121
Query: 71 FLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAM 127
L + G++ +D V+ + PE +T+RQLL H + L DL + P +
Sbjct: 122 QLVDAGRIQLDAPVMRYWPEFAARGKQAVTVRQLLAHTSGLQA-----DLKSRPASDGRV 176
Query: 128 FHLNRRSQPAF--------LYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF 179
LN +Q +YSD++F +LG ++ERI +Q LD+ + ++ P GM +T F
Sbjct: 177 GVLNEIAQQRLYAAPGERVIYSDLNFAVLGELVERITHQPLDIYCAEHIFVPLGMRDTGF 236
Query: 180 GP----VELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL------ 229
P + T G G VHDP A + AG+AGLFST DL F + L
Sbjct: 237 RPDPEHAARSAATTAG-RRGKVHDPLATWMQGVAGNAGLFSTAGDLARFAQMLLNGGLST 295
Query: 230 ADDFARDLNQNF--------SPLDDKE-RSLAWNLEGDW------------LDHTGYTGT 268
A R L+ + SPL R L W L ++HTGYTGT
Sbjct: 296 ATPPVRILSASTIATLAVAASPLSATPWRGLGWALTSPLVSDRDRLPPVGAIEHTGYTGT 355
Query: 269 FIMWNRQKQEATIFLSNRTYEKDE------RAQWI 297
I + + + L+NR + D+ RAQ I
Sbjct: 356 GIWVDFITRRFAVILTNRVHPDDKGDAGPLRAQII 390
>gi|121529763|ref|ZP_01662374.1| beta-lactamase, putative [Ralstonia pickettii 12J]
gi|153887434|ref|ZP_02008585.1| Uncharacterised conserved protein UCP016719 [Ralstonia pickettii
12D]
gi|121303358|gb|EAX44325.1| beta-lactamase, putative [Ralstonia pickettii 12J]
gi|151576112|gb|EDN40517.1| Uncharacterised conserved protein UCP016719 [Ralstonia pickettii
12D]
Length = 796
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 86/293 (29%), Positives = 137/293 (46%), Gaps = 40/293 (13%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLP---ESDYPDITIRQLLTHATDLD 109
++DLAS++K V T L E G+L++D + P + IT+RQLL H + L
Sbjct: 99 IFDLASLTKAVATATAVLQLAERGRLELDAPASRYWPAFGDVGKAGITLRQLLNHTSGLP 158
Query: 110 PFIPNR-DLLTAPELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVILKD 166
+ R +L + + A+ + +P +YSD++++ LG +++R+ LD
Sbjct: 159 SGLAARSELRSHATVLHAIEIMPPIGEPGRNVIYSDLNYVALGELVQRVSGMGLDAWCAQ 218
Query: 167 QVWKPWGMTETKFGPVELAV----PTV----RGVEAGIVHDPKARLLGRHAGSAGLFSTI 218
+++P GM +T F P A+ PT+ R + G VHDP A LG +G+AGLFST
Sbjct: 219 HIFRPLGMRDTAFRPSHRAIARIAPTIVRNGRWLR-GNVHDPTAAALGGVSGNAGLFSTA 277
Query: 219 KDLQIFLEHYL------------ADDFARDLNQNFSPLDDKERSLAWNLEGDWL------ 260
DL +F L D A L + S + R+L W ++ +
Sbjct: 278 DDLALFARMLLNGGSLGGHQILQPDSVALLLTPDGSTAVEATRTLGWEVQAPLIPNRYRA 337
Query: 261 ------DHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMNLI 307
H GYTGT + + + I L++R Y DER + R V+NL+
Sbjct: 338 PRVGLVQHLGYTGTGLWIDLVTRRFVIVLTSRLY-PDERGNAMPLREAVLNLV 389
>gi|149176975|ref|ZP_01855584.1| Uncharacterised conserved protein UCP016719 [Planctomyces maris DSM
8797]
gi|148844230|gb|EDL58584.1| Uncharacterised conserved protein UCP016719 [Planctomyces maris DSM
8797]
Length = 781
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 90/285 (31%), Positives = 133/285 (46%), Gaps = 36/285 (12%)
Query: 39 QSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPD 95
Q PE T V+D+AS++K V T L E G++ + V ++PE + D
Sbjct: 83 QVQPEKVAMT-TDTVFDMASLTKPVATATSIMQLIEQGKVQLSDPVAKYIPEFAVNGKQD 141
Query: 96 ITIRQLLTHATDLDPFIPNRDLLTAPELK-EAMFHLNRRSQPA--FLYSDVHFLLLGFIL 152
IT+ QLLTH L P +D PE + ++ L +P F Y+DV F+LLG I+
Sbjct: 142 ITVYQLLTHQGGLIPDNSIKDYQDGPEKALQRIYDLKLYYEPGTRFAYTDVGFILLGDIV 201
Query: 153 ERIFNQDLDVILKDQVWKPWGMTETKFGP---VELAVPTVRGVEA----GIVHDPKARLL 205
+R+ Q + + +++P GMTET + P + T + E G VHDP+A L
Sbjct: 202 KRVTGQSVHEYSQKHIYQPLGMTETGYLPAAELRQRAATTQQREGRWMQGEVHDPRAYKL 261
Query: 206 GRHAGSAGLFSTIKDLQIFLEHYLADDFAR----------DLNQNFSPLDDKERSLAWNL 255
AG AGLFST +DL I+ + L + DL + D +R L W++
Sbjct: 262 DGVAGHAGLFSTAEDLAIYAQALLNQGRSGKKQVLKPETVDLMTRGYQVVDIKRGLGWDV 321
Query: 256 -------EGDWLD-----HTGYTGTFIMWNRQKQEATIFLSNRTY 288
GD H G+TGT + + + IFLSNR +
Sbjct: 322 LSGYSSNRGDLFSRQAFGHGGFTGTALWIDPAQDLFVIFLSNRVH 366
>gi|118745247|ref|ZP_01593225.1| beta-lactamase [Geobacter lovleyi SZ]
gi|118681815|gb|EAV88235.1| beta-lactamase [Geobacter lovleyi SZ]
Length = 408
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 83/278 (29%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 51 GLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDL-- 108
G V+D+AS++KV L + G L + + + PE + +IT+ LLTH + L
Sbjct: 102 GTVFDVASLTKVFATTPAIIRLMDQGTLSLLDPLSRWFPEFEGKNITVLHLLTHTSGLHD 161
Query: 109 ---DPFIPNRDLLTAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILK 165
DP P ++ + R FLY+D++F+LLG ++ RI LD +
Sbjct: 162 GMLDPEAPLESAISRAAAQAGAVPAGTR----FLYADINFILLGNLVRRITAFGLDGYCQ 217
Query: 166 DQVWKPWGMTETKFGP-----VELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKD 220
D ++P GM T F P + GV G+V DP ARLLG AG AGLFST +D
Sbjct: 218 DSFYRPLGMLHTGFNPAAKLNTAATLGGRNGVLNGVVQDPNARLLGGVAGHAGLFSTAED 277
Query: 221 LQIFLEHYLADD--------FARDLNQNFSPLDDKE----RSLAWNLEGDW--------- 259
L F L + AR + Q +P + R L W+ E +
Sbjct: 278 LARFARMLLNEGELDGRRVLSARAVAQMTAPYYFRNGSIVRGLGWDRESPFSAPKGALFT 337
Query: 260 ---LDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERA 294
HTGY+G+ + + +K I L+ R ++ R+
Sbjct: 338 EFSYGHTGYSGSSVWIDPEKDLYVILLTTRLDYRNRRS 375
>gi|119356495|ref|YP_911139.1| beta-lactamase [Chlorobium phaeobacteroides DSM 266]
gi|119353844|gb|ABL64715.1| beta-lactamase [Chlorobium phaeobacteroides DSM 266]
Length = 395
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 99/332 (29%), Positives = 143/332 (43%), Gaps = 43/332 (12%)
Query: 17 GIYPGASFAYFKDNQWTEFY--LGQSDPE-HGLQTEAGLVYDLASVSKVVGVGTVCTFLW 73
G++PGAS A + + T F+ G D H + VYDLAS++K V ++ LW
Sbjct: 55 GVFPGASIAVRHEGK-TVFHQAFGTIDCRTHATPADTSTVYDLASLTKAVVTTSIAMQLW 113
Query: 74 EIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIPNRDLLTAPE-LKEAMFH 129
E L +D+ V + P +TIR L+TH + L PE + +A+
Sbjct: 114 ERDSLQLDQPVSRYFPAFTGKGKERVTIRHLMTHTSGLRAHTFFHKTCRTPEDVVQAICS 173
Query: 130 LNRRSQPAF--LYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELAVP 187
++P YSD+ F++LG +LE I + L+ ++ P GM T F P
Sbjct: 174 DTLITKPGIKTTYSDLGFIVLGRVLETITGKSLESNFHERFAVPLGMKNTTFNPGNRFNG 233
Query: 188 TVRGVEAG----------IVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADD----- 232
+ E +VHD A LLG AG AGLFST DL F +
Sbjct: 234 KIAATETDTSWHFNRLRPLVHDQNAALLGGVAGHAGLFSTSSDLLKFTSMMMDGGIYKGR 293
Query: 233 --FARDLNQNFSPLDDK-ERSLAWN---LEG-----------DWLDHTGYTGTFIMWNRQ 275
F + + F+ + R+L W+ LEG W H GYTGT I + Q
Sbjct: 294 RFFKPETVRYFTSRNGTLPRALGWDLRSLEGSSSAGTLFSTQSW-GHLGYTGTSIWIDPQ 352
Query: 276 KQEATIFLSNRTYEKDERAQWILDRNQVMNLI 307
K+ A I LSNR E + R ++ N +
Sbjct: 353 KKLAVIILSNRVCPTSENIKIRAFRPELHNTV 384
>gi|23098122|ref|NP_691588.1| beta-lactamase [Oceanobacillus iheyensis HTE831]
gi|22776347|dbj|BAC12623.1| beta-lactamase (cephalosporinase) [Oceanobacillus iheyensis HTE831]
Length = 494
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 53/330 (16%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEF----YLGQ------SDPEHGLQTEAGLVYDLASV 59
IE I + PGA +D Q + Y + ++ E+ ++ + ++D AS+
Sbjct: 55 IENAISDQVMPGAVVLVARDGQIVKHDAYGYAARYTDGNFTEMENPIEMQENTIFDTASI 114
Query: 60 SKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDL--DPFIPN 114
SK+ + T LW+ G ++D V ++PE + ++TI+QLLTH + +P
Sbjct: 115 SKLFTATAIMT-LWDEGLFELDDPVALYIPEFASNGKEEVTIKQLLTHTSGFRASTTVPV 173
Query: 115 RDLLTAPELKEAMFHLNRRSQ----PAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWK 170
++ E F LN + +LYSDV F+ LG ++ER+ Q D + + + +
Sbjct: 174 HEIEGDRE-DRLDFVLNETLEVPPGTRYLYSDVDFITLGVLIERLSGQRQDEYVAENITE 232
Query: 171 PWGMTETKFGP----------VELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKD 220
P M++T + P E RG+ G VHD KA L AG AG+FS+ +D
Sbjct: 233 PLQMSDTMYSPPASLKNRIAATEYQANVNRGLVWGSVHDEKAWALDGVAGHAGVFSSAED 292
Query: 221 LQIF-----------LEHYLADDFARDLNQNFS-PLDDKERSLAWNLEGDW--------- 259
L +F E L+++ + N++ +++ L W L W
Sbjct: 293 LAVFGQMMLNEGSYQGEQILSEEAFDLITTNWNGAFPGQDQGLGWELNQSWYMDDLAEQN 352
Query: 260 -LDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
+ HTGYTGT I+ + K+ TI L+NR +
Sbjct: 353 TIGHTGYTGTSIVISPNKKSITILLTNRVH 382
>gi|32471513|ref|NP_864506.1| putative esterase [Rhodopirellula baltica SH 1]
gi|32443354|emb|CAD72187.1| putative esterase [Rhodopirellula baltica SH 1]
Length = 389
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 95/323 (29%), Positives = 147/323 (45%), Gaps = 45/323 (13%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ---WTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVG 66
++E I+AG PGA A D + + F Q +P TE ++DLAS++K +
Sbjct: 36 VKEGIQAGKCPGAVVAIGFDGRTVFQSAFGDRQVEPTKVPMTE-DTIFDLASLTKPIATA 94
Query: 67 TVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIPNRDLL-TAPE 122
T L + G++ ID V +LP+ D +TIR LL H + L P D T E
Sbjct: 95 TSVMILADQGKISIDDPVSQYLPDFAGQDKESVTIRHLLLHTSGLIPDNGMSDYKGTHAE 154
Query: 123 LKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF- 179
+ + RS P F YSDV F++LG ++E++ + L+ + +++P M +T F
Sbjct: 155 SIANLMNQKLRSPPGTRFRYSDVGFMVLGELVEQVSGKPLNEFAQQNIFEPLKMKDTNFR 214
Query: 180 --GPVELAVPTVRGVEA----GIVHDPKARLLGRHAGSAGLFSTIKDL----QIFLEHYL 229
G + T + E G VHDP+ LG AG AGLFST +DL + L+
Sbjct: 215 SIGQDDERCATTQQREGHWMRGEVHDPRCYALGGVAGHAGLFSTAEDLSKLANVLLKSGK 274
Query: 230 ADDFARDLNQNFSPLDD------------KERSLAWNLEGDW------------LDHTGY 265
+D + F + + RSL W+ + + H G+
Sbjct: 275 NEDVSLFSQSTFDAMTTGIKVPGASENQIQLRSLGWDKQSGYSSNRGKSMTESAFGHGGF 334
Query: 266 TGTFIMWNRQKQEATIFLSNRTY 288
TGT I + +++ IFLSNR +
Sbjct: 335 TGTAIWIDPEQKLYVIFLSNRVH 357
>gi|124520411|ref|ZP_01695567.1| beta-lactamase [Bacillus coagulans 36D1]
gi|124497638|gb|EAY45193.1| beta-lactamase [Bacillus coagulans 36D1]
Length = 551
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 96/340 (28%), Positives = 154/340 (45%), Gaps = 63/340 (18%)
Query: 4 TKIIKKIEEQIEAGIYPGA----------------SFAY-FKDNQWTEFYLGQSDPEHGL 46
T I K + + I + PGA +AY + D+Q+TE S P +
Sbjct: 65 TDIDKAVNDAIAQKVMPGAVVLVARKGTIVKEQAYGYAYRYTDDQFTE----ASVP---V 117
Query: 47 QTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLP---ESDYPDITIRQLLT 103
+ +YD+AS+SK+ L+E + +D V ++P E+ ++TIRQL+T
Sbjct: 118 LAKTNTIYDIASISKLF-TSIAAMQLFEKRKFALDDPVAKYIPAFAENGKENVTIRQLMT 176
Query: 104 HATDLDPFIPNRDLLTAPE--LKEAMFH-LNRRSQPAFLYSDVHFLLLGFILERIFNQDL 160
H + + IP + T+ + L+ + H L + YSD++ + LG ++E + Q L
Sbjct: 177 HTSGFEAGIPVYKMGTSRKDRLEIVLKHGLQNPPGTTYTYSDLNMITLGVLVEVLSGQRL 236
Query: 161 DVILKDQVWKPWGMTETKFGP----------VELAVPTVRGVEAGIVHDPKARLLGRHAG 210
D +K + P GM +T + P E T RG+ G VHD A L AG
Sbjct: 237 DAYVKTHITIPLGMRDTMYNPPASLKTRIAATEFQPWTERGMIRGQVHDENAWALDGVAG 296
Query: 211 SAGLFSTIKDLQIFLEHYLAD-----------DFARDLNQNFS---PLDDK----ERSLA 252
AG+FST DL I + L + + R + QN + P DD E +
Sbjct: 297 HAGVFSTAHDLAILAQTILQNGKYAGARILKPETVRLMEQNMNSAFPGDDHGLGFELNQG 356
Query: 253 WNLEG----DWLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
W ++ + + HTGYTGT ++ + + Q I L+NR +
Sbjct: 357 WYMDALSDTNTMGHTGYTGTSMVISPKNQTTVILLTNRVH 396
>gi|138894950|ref|YP_001125403.1| Beta-lactamase (cephalosporinase) [Geobacillus thermodenitrificans
NG80-2]
gi|134266463|gb|ABO66658.1| Beta-lactamase (cephalosporinase) [Geobacillus thermodenitrificans
NG80-2]
Length = 569
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
++DLAS+SK+ T L+E G+ +D V ++PE + ++TIRQL+TH + L
Sbjct: 142 MFDLASISKLFTT-TAAMKLYEQGKFSLDDPVAKYIPEFAQNGKENVTIRQLMTHTSGLA 200
Query: 110 PFIPNRDLLTAPELKEAMFHLNRRSQP---AFLYSDVHFLLLGFILERIFNQDLDVILKD 166
+IP + T + + + P ++YSD++ + LG ++ER+ LD +
Sbjct: 201 AWIPLYTMGTNRDDRLQIVFAQPLEHPPGTTYVYSDLNMITLGALVERLSGVRLDQFVYR 260
Query: 167 QVWKPWGMTETKFGP----------VELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFS 216
+ KP GM T + P E T RG+ G VHD A L AG AGLFS
Sbjct: 261 YITKPLGMNNTMYNPPLLKKRRIAATEYQPWTGRGMVWGEVHDENAWALDGVAGHAGLFS 320
Query: 217 TIKDLQIFLEHYLAD-----------DFARDLNQNFSP-LDDKERSLAWNLEGDW----- 259
T +DL IF +L + + + L +N P + L W L W
Sbjct: 321 TARDLAIFASMFLQNGTYGGKRILQPETVQLLMENQIPQFPGYDHGLGWELAQGWYMDAL 380
Query: 260 -----LDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
HTGYTGT I+ N I L+NR +
Sbjct: 381 SEHTSFGHTGYTGTSIVVNPNNDVIAILLTNRVH 414
>gi|78186327|ref|YP_374370.1| D-alanyl-D-alanine carboxypeptidease, putative [Pelodictyon
luteolum DSM 273]
gi|78166229|gb|ABB23327.1| D-alanyl-D-alanine carboxypeptidease, putative [Pelodictyon
luteolum DSM 273]
Length = 381
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 44/332 (13%)
Query: 3 WTKIIKKIEEQIEAGIYPGASFAY-FKDNQWTEFYLGQSDPEHGLQTE---AGLVYDLAS 58
+T + + ++E ++ ++PGAS A ++ N T F+ GL + + VYD+AS
Sbjct: 17 FTPVRRLMQEGVDENVFPGASIAVIYRGN--TIFHEAFGTIGCGLSPKPAYSSTVYDIAS 74
Query: 59 VSKVVGVGTVCTFLWEIGQLDIDRLVIDFLP---ESDYPDITIRQLLTHATDLDPFIPNR 115
++K V L E L +D+ + P + DITIRQLL H + L P
Sbjct: 75 LTKAVATTAAIMQLVERDSLKLDQSAAGYFPPFGRNGKNDITIRQLLNHTSGLRPHAWYI 134
Query: 116 DLLTAP-ELKEAMFHLNRRSQP--AFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPW 172
+ P EL A+ + ++P A YSD F++LG I+E+I + L+ + + P
Sbjct: 135 KTCSTPQELIAAICNDTLLTKPGTATAYSDNGFIILGTIVEQITGRSLEENFRARFSTPL 194
Query: 173 GMTETKFGP----VELAVPTVR----GVEAG---IVHDPKARLLGRHAGSAGLFSTIKDL 221
GM T F P + PT R + G +V+D A +LG AG AGLFS+ DL
Sbjct: 195 GMQSTSFNPSGEMLRRVAPTGRDSTWNTKIGPRPLVNDQNAAILGGAAGHAGLFSSTGDL 254
Query: 222 QIFLEHYLAD---DFARDLNQN----FSPLD-DKERSLAWN---LEG----------DWL 260
F + D D R Q+ F+ + + ER+L W+ LEG D
Sbjct: 255 IRFTLMLMNDGRQDGVRYFRQSTIRQFTRRNGNDERALGWDLRSLEGYASTGSCFSKDSW 314
Query: 261 DHTGYTGTFIMWNRQKQEATIFLSNRTYEKDE 292
H G+TGT + + +K A I LSNR E
Sbjct: 315 GHLGFTGTSLWIDPRKDLAVIMLSNRVCPSSE 346
>gi|83570653|ref|ZP_00922096.1| COG1680: Beta-lactamase class C and other penicillin binding
proteins [Shigella dysenteriae 1012]
Length = 430
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 95/352 (26%), Positives = 153/352 (43%), Gaps = 74/352 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ------W--TEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I +Q++AG YPG + KDNQ W + Y G E ++ G +YDLAS +K
Sbjct: 43 ISQQVDAG-YPGVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTK 101
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G+L D + ++P +D P+ TI+ LL H+ DP
Sbjct: 102 MYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADP 161
Query: 111 FIPNRDLLTA------PELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+ + A + E + H QP +YSDV ++LLGFI+E + Q LD
Sbjct: 162 QYPNKAVAGALYSQDKGQTLEMIKHTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDR 221
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
+++ +++P G+T T F P+ ++A + G G++H P R
Sbjct: 222 YVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDE 281
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYL-------ADDFARDLNQNF--SPLDDKERS 250
+G +G AGLFS D+ + ++ L F+ + + F S +D
Sbjct: 282 KAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFSAETVKMFTTSSKEDATFG 341
Query: 251 LAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT I+ + A + LSN+ +
Sbjct: 342 LGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVIVIDPVNHMAIVMLSNKPH 393
>gi|145219302|ref|YP_001130011.1| beta-lactamase [Prosthecochloris vibrioformis DSM 265]
gi|145205466|gb|ABP36509.1| beta-lactamase [Prosthecochloris vibrioformis DSM 265]
Length = 409
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 100/325 (30%), Positives = 146/325 (44%), Gaps = 43/325 (13%)
Query: 3 WTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPE---HGLQTEAGLVYDLASV 59
+T + K ++E ++ ++PGAS A F + T F+ + H + +YDLAS+
Sbjct: 43 FTPVEKLLQEGVKKQVFPGASIAVFHKGE-TVFHQAFGNTRCTRHPTPADTTTIYDLASL 101
Query: 60 SKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIPNRD 116
+K + + L E LDIDR +LPE + ITIRQLLTH + L D
Sbjct: 102 TKAIATTAIAMQLAERDSLDIDRPASHYLPEFGNNGKERITIRQLLTHTSGLRSHADYID 161
Query: 117 -LLTAPELKEAMFHLNRRSQPAFL--YSDVHFLLLGFILERIFNQDLDVILKDQVWKPWG 173
T EL A+ + ++P L YSD F++LG I+E I + L + + P
Sbjct: 162 SCRTQSELFRAVINDTPVTEPGTLTAYSDNGFIVLGKIIEAITRRSLADNFRTRFSGPLS 221
Query: 174 MTETKFGP-VEL---AVPTVR------GVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQI 223
+ T F P EL PT R + +V+D A ++G AG AGLF T DL
Sbjct: 222 LHSTCFTPGRELQSRVAPTSRTKSWNLNWKRPLVNDLNAAIMGGVAGHAGLFGTTGDLLR 281
Query: 224 FLEHYLADD-------FARDLNQNFSPLDDK-ERSLAWNL--------------EGDWLD 261
F + F + F+ + K ER+L W+L E W
Sbjct: 282 FTRMLMEGGELEGKRYFKASTIRRFTRREGKQERALGWDLRSQEGYASTGPEFSEKSW-G 340
Query: 262 HTGYTGTFIMWNRQKQEATIFLSNR 286
H G+TGT + + +K A I LSNR
Sbjct: 341 HLGFTGTSLWIDPEKDLAVIMLSNR 365
>gi|126647102|ref|ZP_01719612.1| putative hydrolase/beta lactamase fusion protein [Algoriphagus sp.
PR1]
gi|126577150|gb|EAZ81398.1| putative hydrolase/beta lactamase fusion protein [Algoriphagus sp.
PR1]
Length = 984
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 89/364 (24%), Positives = 155/364 (42%), Gaps = 79/364 (21%)
Query: 4 TKIIKKIEEQIEAGIY----PGASFAYFKDNQWT-EFYLGQSDPEHGLQTEAGLVYDLAS 58
+KI+ +I+E E I PGA+ K+ + E G + ++ + + VYDLAS
Sbjct: 593 SKILDQIDEVAEKAIQMQATPGANVLVVKNGKVVFERSYGTLEYKNSPKVNSETVYDLAS 652
Query: 59 VSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIPN- 114
++KV+ FL G+LD+++ + D++PE ++ ++ ++ ++TH L +IP+
Sbjct: 653 ITKVLATTQAVMFLESRGELDMNKTLGDYVPELKGTNKANLVLKDVMTHEAGLVAYIPHY 712
Query: 115 ---------------------------RDLLTAPELKEAMFH------LNRRS--QPAFL 139
D+ +L+++++H L R+S + ++
Sbjct: 713 VKTVQNGMWRGDYYKPKGEAGFTRPVSNDMFARDDLRDSIWHWTVKSKLQRKSGSRYKYV 772
Query: 140 YSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF-----------GPVELAVPT 188
YSD+ L+ ++E I NQ L+ L + P G+ F P E V
Sbjct: 773 YSDLTMYLMQAVVENIVNQPLNEFLDQNFYAPLGLNTLTFLPYEKMPLDNIAPTEDDVAF 832
Query: 189 VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLN-------QNF 241
+ + G VHDP A + G AG AGLF T DL + ++ L D+ + F
Sbjct: 833 RKRLVRGYVHDPGAAMFGGVAGHAGLFGTANDLAVMMQMMLNKGSYGDVALIKPETVEAF 892
Query: 242 SPLDDKERSLAWNLEGDWLD-----------------HTGYTGTFIMWNRQKQEATIFLS 284
+ K W + +D HTG+TGT + + + +FLS
Sbjct: 893 TKRQSKVSRRGWGWDKPEVDMGKGGSAGDLAPKSTFGHTGFTGTCVWADPENDLIYVFLS 952
Query: 285 NRTY 288
NR Y
Sbjct: 953 NRVY 956
>gi|56963340|ref|YP_175071.1| penicillin binding protein [Bacillus clausii KSM-K16]
gi|56909583|dbj|BAD64110.1| penicillin binding protein [Bacillus clausii KSM-K16]
Length = 369
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 84/273 (30%), Positives = 129/273 (47%), Gaps = 40/273 (14%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLP---ESDYPDITIRQLLTHATDLD 109
V+DLAS++KVV + LW+ +L + V + LP + ++TI QLLTH+ L
Sbjct: 75 VFDLASLTKVVCTLPLILQLWQRKRLSLHMPVAEVLPPFGANGKENVTIFQLLTHSAGLP 134
Query: 110 PFIP-NRDLLTAPELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVILKD 166
+P ++ L E + H P +YSD+ F+ LG I+E++ + L + +
Sbjct: 135 ASVPFYKEGLNYHETIARVCHQAPTYTPGTRVVYSDLSFIALGAIIEQVTGKSLQRVANE 194
Query: 167 QVWKPWGMTETKFGPVELAVPTVRGV-----------EAGIVHDPKARLLGRHAGSAGLF 215
++ P GM ET+F P P R + G VHD A +G +G AGLF
Sbjct: 195 WIYTPLGMQETQFCP---RFPATRYAATEWDHWLGRPKCGEVHDENAFAMGGVSGHAGLF 251
Query: 216 STIKDLQIFLEHY------LAD-DFARDLNQNFSPLDDKERSLAWNLEGDWLD------- 261
ST+ D++ F L D D R Q+FS ++ R L W L+G +
Sbjct: 252 STVSDIEKFAGEMQTATPLLFDPDILRYARQHFSAGMEEPRGLGWILKGAQTNSSCGRFF 311
Query: 262 ------HTGYTGTFIMWNRQKQEATIFLSNRTY 288
H G+TGT I ++ + A IFL+NR +
Sbjct: 312 SPFSYGHLGFTGTSIWFDPVAELAVIFLTNRVH 344
>gi|157077854|gb|ABV17562.1| beta-lactamase [Escherichia coli E24377A]
Length = 434
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 94/352 (26%), Positives = 154/352 (43%), Gaps = 74/352 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ------W--TEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I +Q++AG YPG + KDNQ W + Y G E ++ G +YDLAS +K
Sbjct: 47 ISQQVDAG-YPGVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTK 105
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G+L D + ++P +D P+ TI+ LL H+ DP
Sbjct: 106 MYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADP 165
Query: 111 FIPNRDLLTA--PELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+ + A + K + +R+ QP +YSDV ++LLGFI+E + Q LD
Sbjct: 166 QYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDR 225
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
+++ +++P G+T T F P+ ++A + G G++H P R
Sbjct: 226 YVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDE 285
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYL-------ADDFARDLNQNF--SPLDDKERS 250
+G +G AGLFS D+ + ++ L F+ + + F S +D
Sbjct: 286 KAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFSAETVKMFTTSSKEDATFG 345
Query: 251 LAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + + A + LSN+ +
Sbjct: 346 LGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPH 397
>gi|145618902|ref|ZP_01774957.1| beta-lactamase [Geobacter bemidjiensis Bem]
gi|144944828|gb|EDJ79898.1| beta-lactamase [Geobacter bemidjiensis Bem]
Length = 459
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 31/263 (11%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFI 112
V+DLAS++KVV L + G++ + V + PE +T+ LLTH + L F
Sbjct: 83 VFDLASLTKVVATTPAVIKLLDEGKISLTDPVSRWFPEFAGSQLTVLHLLTHTSGLADFQ 142
Query: 113 PNRDLLTAPELKEAMFHLNRRSQ-PAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKP 171
+++A L R+S +F Y+D++F+LLG ++ R+ + LD+ K+Q+++P
Sbjct: 143 IGS---IQGAIRKAAAQLARKSPGTSFDYADINFILLGELVHRVSGETLDLFCKEQIYEP 199
Query: 172 WGMTETKFGPVELAVPTV---RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHY 228
G T+F P VP + G G+V D AR LG AG AG+FS+ DL +
Sbjct: 200 LGAKATQFLPPAGLVPEIAPTSGNRGGVVQDENARRLGGVAGHAGVFSSAHDLSRYARLL 259
Query: 229 LAD---DFARDLN-----QNFSPL----DDKERSLAWNL-------EGDWLD-----HTG 264
L D R L+ Q +P +R L W++ +G++ HTG
Sbjct: 260 LGKGTLDGKRILSEQVVAQMITPYLCNNGRVKRGLGWDISSPFSAPKGNFFSDASFGHTG 319
Query: 265 YTGTFIMWNRQKQEATIFLSNRT 287
Y+G+ I + ++ I L+ R+
Sbjct: 320 YSGSSIWIDPEQDLFVIMLTRRS 342
>gi|75187183|ref|ZP_00700450.1| COG1680: Beta-lactamase class C and other penicillin binding
proteins [Escherichia coli E24377A]
gi|75214749|ref|ZP_00713251.1| COG1680: Beta-lactamase class C and other penicillin binding
proteins [Escherichia coli E110019]
gi|75227761|ref|ZP_00714490.1| COG1680: Beta-lactamase class C and other penicillin binding
proteins [Escherichia coli B7A]
gi|75233874|ref|ZP_00718337.1| COG1680: Beta-lactamase class C and other penicillin binding
proteins [Escherichia coli E110019]
gi|75237818|ref|ZP_00721834.1| COG1680: Beta-lactamase class C and other penicillin binding
proteins [Escherichia coli E110019]
Length = 430
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 94/352 (26%), Positives = 154/352 (43%), Gaps = 74/352 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ------W--TEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I +Q++AG YPG + KDNQ W + Y G E ++ G +YDLAS +K
Sbjct: 43 ISQQVDAG-YPGVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTK 101
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G+L D + ++P +D P+ TI+ LL H+ DP
Sbjct: 102 MYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADP 161
Query: 111 FIPNRDLLTA--PELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+ + A + K + +R+ QP +YSDV ++LLGFI+E + Q LD
Sbjct: 162 QYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDR 221
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
+++ +++P G+T T F P+ ++A + G G++H P R
Sbjct: 222 YVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDE 281
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYL-------ADDFARDLNQNF--SPLDDKERS 250
+G +G AGLFS D+ + ++ L F+ + + F S +D
Sbjct: 282 KAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFSAETVKMFTTSSKEDATFG 341
Query: 251 LAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + + A + LSN+ +
Sbjct: 342 LGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPH 393
>gi|75211400|ref|ZP_00711490.1| COG1680: Beta-lactamase class C and other penicillin binding
proteins [Escherichia coli B171]
gi|75257242|ref|ZP_00728766.1| COG1680: Beta-lactamase class C and other penicillin binding
proteins [Escherichia coli E22]
Length = 429
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 94/352 (26%), Positives = 154/352 (43%), Gaps = 74/352 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ------W--TEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I +Q++AG YPG + KDNQ W + Y G E ++ G +YDLAS +K
Sbjct: 43 ISQQVDAG-YPGVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTK 101
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G+L D + ++P +D P+ TI+ LL H+ DP
Sbjct: 102 MYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADP 161
Query: 111 FIPNRDLLTA--PELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+ + A + K + +R+ QP +YSDV ++LLGFI+E + Q LD
Sbjct: 162 QYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDR 221
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
+++ +++P G+T T F P+ ++A + G G++H P R
Sbjct: 222 YVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDE 281
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYL-------ADDFARDLNQNF--SPLDDKERS 250
+G +G AGLFS D+ + ++ L F+ + + F S +D
Sbjct: 282 KAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFSAETVKMFTTSSKEDATFG 341
Query: 251 LAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + + A + LSN+ +
Sbjct: 342 LGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPH 393
>gi|68550512|ref|ZP_00589959.1| Beta-lactamase [Pelodictyon phaeoclathratiforme BU-1]
gi|68242592|gb|EAN24806.1| Beta-lactamase [Pelodictyon phaeoclathratiforme BU-1]
Length = 379
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 142/323 (43%), Gaps = 42/323 (13%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ---WTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVG 66
+++ + ++PGAS A + F DP+ E +YDLAS++K +
Sbjct: 38 VQKAVSDTVFPGASLAVLYKGKVVFHNAFGRMTYDPKSS-PVETTTMYDLASLTKAIVTT 96
Query: 67 TVCTFLWEIGQLDIDRLVIDFLP---ESDYPDITIRQLLTHATDLDPF-IPNRDLLTAPE 122
++ L + L I V +LP + +TI QLL H + L + T E
Sbjct: 97 SIAMQLVDRDSLSIQTPVSRYLPAFAQKGKDAVTIEQLLRHTSGLRAHTFYAKSCRTPEE 156
Query: 123 LKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
L A+ SQP LYSD++F+LLG I+E I + L + +P GM+ T F
Sbjct: 157 LFRAIEADTLLSQPGKTTLYSDLNFMLLGRIIEMITGKTLAANFHRRFAEPLGMSSTMFT 216
Query: 181 P--------VELAVPTVRGVEA--GIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLA 230
P + T+ +EA +V+D A LLG AG AGLFST DL + + L
Sbjct: 217 PPPSQSGRIAPVDKDTLWPLEAPRPLVNDQNAALLGGVAGHAGLFSTTGDL-LGMVSMLM 275
Query: 231 DD--------FARDLNQNFSPLDDKERSLAWNLE--------GDWLD-----HTGYTGTF 269
D F + F + R+L W+L GD+ H GYTGT
Sbjct: 276 DGGSINGQTYFRTATLRKFLSRNGYPRALGWDLRSPDGHSSAGDYFSASSYGHLGYTGTS 335
Query: 270 IMWNRQKQEATIFLSNRTYEKDE 292
I + +K+ A I LSNR Y E
Sbjct: 336 IWIDPEKELAVILLSNRVYPTSE 358
>gi|39997145|ref|NP_953096.1| hypothetical protein GSU2047 [Geobacter sulfurreducens PCA]
gi|39984035|gb|AAR35423.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
Length = 395
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 84/281 (29%), Positives = 127/281 (45%), Gaps = 43/281 (15%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
++D+AS++KV+ L E G+L + ++ + PE D+ + LLTH + LD
Sbjct: 84 IFDIASLTKVIATTPAVMRLAEEGRLSLVDPLVRWFPEFAGHGKDDVLVVHLLTHTSGLD 143
Query: 110 PFIPNRDLLTAPELKEAMFHL---NRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVIL 164
F L +A L+ A+ + + +P F Y+D++F+LLG ++ R+ LD
Sbjct: 144 DF----SLSSADPLQSAISGVAAQKLKGEPGNRFRYADINFILLGELVRRVTGSTLDRYA 199
Query: 165 KDQVWKPWGMTETKFGP----VELAVPTVRGVEA---GIVHDPKARLLGRHAGSAGLFST 217
D +P GM +T F P E T+ G G V DP ARLLG AG AGLF T
Sbjct: 200 ADAFLRPLGMKDTAFLPGPAIAERCAATLDGSGGPHFGTVQDPLARLLGGVAGHAGLFGT 259
Query: 218 IKDLQIFLEHYLADD--------FARDLNQNFSPLDDK----ERSLAWNL---------E 256
DL +F L + R + Q +P + R L W++ E
Sbjct: 260 ASDLALFCRMILGEGELNGRRVLEERTVRQMTAPYFSRGGKVTRGLGWDMASPFSSPRGE 319
Query: 257 G---DWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERA 294
G + HTGY+G I + + IFLS R + +A
Sbjct: 320 GFSEESFGHTGYSGGSIWIDPRTDTYVIFLSVRLDHRHTKA 360
>gi|58040557|ref|YP_192521.1| Putative beta-lactamase [Gluconobacter oxydans 621H]
gi|58002971|gb|AAW61865.1| Putative beta-lactamase [Gluconobacter oxydans 621H]
Length = 394
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 80/274 (29%), Positives = 126/274 (45%), Gaps = 39/274 (14%)
Query: 54 YDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDP 110
+D+AS++K L E +L +D V + PE + DI++R L+TH + L P
Sbjct: 93 FDMASLTKPTMTALAVMQLVEQQKLHLDDRVSQYFPEFASNGKGDISVRLLMTHYSGLPP 152
Query: 111 FIPNRDLLT--APELKEAMFH-LNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQ 167
IP D T A ++ AM L F+YSD+++++LG ++E++ LD +
Sbjct: 153 DIPLNDPWTGKAEGVRRAMTSPLANPPGEKFVYSDINYIMLGLLVEKLGGLPLDQYARIN 212
Query: 168 VWKPWGMTETKFGPV----ELAVPTVRGVEA----GIVHDPKARLLGRHAGSAGLFSTIK 219
+ +P GMTE+ + P L PT + G+VHDP AR +G AG AGLFS +
Sbjct: 213 ILEPLGMTESGYLPATGLRSLIAPTQYDEQGNMLRGVVHDPTARRMGGVAGHAGLFSDAR 272
Query: 220 DLQIFLEHYLADDFAR----DLNQNF--------SPLDDKE-RSLAWNLEGDW------- 259
D+ I+ + L R L Q P E R L W+++ +
Sbjct: 273 DMTIYAQALLDRLKGRPSRFPLRQETLILMTTPQQPAGKTELRGLGWDIDTHYSSPRGDV 332
Query: 260 -----LDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
HTG+TGT + + + L+NR +
Sbjct: 333 FSHRSFGHTGFTGTSLWIDPDSDSYVLILTNRVH 366
>gi|74312965|ref|YP_311384.1| putative beta-lactamase [Shigella sonnei Ss046]
gi|73856442|gb|AAZ89149.1| putative beta-lactamase [Shigella sonnei Ss046]
Length = 463
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 94/352 (26%), Positives = 153/352 (43%), Gaps = 74/352 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ------W--TEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I +QI+ G YPG + KDNQ W + Y G E ++ G +YDLAS +K
Sbjct: 76 ISQQIDVG-YPGVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTK 134
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G+L D + ++P +D P+ TI+ LL H+ DP
Sbjct: 135 MYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADP 194
Query: 111 FIPNRDLLTA--PELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+ + A + K + +R+ QP +YSDV ++LLGFI+E + Q LD
Sbjct: 195 QYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDR 254
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
+++ +++P G+T T F P+ ++A + G G++H P R
Sbjct: 255 YVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDE 314
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYL-------ADDFARDLNQNF--SPLDDKERS 250
+G +G AGLFS D+ + ++ L F+ + + F S +D
Sbjct: 315 KAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFSAETVKMFTTSSKEDATFG 374
Query: 251 LAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + + A + LSN+ +
Sbjct: 375 LGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPH 426
>gi|134096975|ref|YP_001102636.1| beta-lactamase [Saccharopolyspora erythraea NRRL 2338]
gi|133909598|emb|CAL99710.1| beta-lactamase [Saccharopolyspora erythraea NRRL 2338]
Length = 569
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 87/301 (28%), Positives = 131/301 (43%), Gaps = 48/301 (15%)
Query: 27 FKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVID 86
+ D Q TE Q +P + ++D+AS+SK+ V + E G +D+D V
Sbjct: 97 YADGQGTELPADQWEP-----VDRDTIFDVASISKLFTSIAVLQQV-EAGAVDLDSPVAR 150
Query: 87 FLPE---SDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKE--AMFHLNRRSQP--AFL 139
+LPE + IT+RQLLTH + L + L T P + L +S P A+
Sbjct: 151 YLPEFGANGKQTITVRQLLTHTSGLPAEV---KLWTLPPQDRIPTVMALQPKSPPGTAYT 207
Query: 140 YSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGP----------VELAVPTV 189
YSD + + LG ++ER+ LD ++ + + +P GM +T + P E
Sbjct: 208 YSDPNMITLGVLVERVTGDRLDEVVAEGITEPLGMRDTGYNPDRGELRRIAATEFQADPP 267
Query: 190 RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIF-----------LEHYLADDFARDLN 238
RG+ G HD A LG AG AG+FST DL I E L + +
Sbjct: 268 RGMVRGQAHDENAWSLGGVAGQAGVFSTADDLAILGQTLLNGGAYAGERILGEHSVEQML 327
Query: 239 QNF-SPLDDKERSLAWNLEGDWL----------DHTGYTGTFIMWNRQKQEATIFLSNRT 287
NF S L + L+ W HTGYTGT ++ + + + L+NR
Sbjct: 328 TNFNSAFPGNSHGLGFELDQRWYMAGLSGPHTAGHTGYTGTSLVIDPASRSIVVLLTNRV 387
Query: 288 Y 288
+
Sbjct: 388 H 388
>gi|83716176|ref|YP_439122.1| beta-lactamase, putative [Burkholderia thailandensis E264]
gi|83650001|gb|ABC34065.1| beta-lactamase, putative [Burkholderia thailandensis E264]
Length = 790
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 90/298 (30%), Positives = 131/298 (43%), Gaps = 44/298 (14%)
Query: 50 AGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHAT 106
A V+DLAS++K V T L E G+L +D + P +TIRQLL H +
Sbjct: 91 ADTVFDLASLTKAVATATAVMQLAERGRLALDAPAARYWPAFAARGKAGVTIRQLLAHTS 150
Query: 107 DLDPFIPNRDLLTAPELKEAMFHLNRRSQPA------FLYSDVHFLLLGFILERIFNQDL 160
L P + + L + A+ R P +YSD++++ LG I+ER+ + L
Sbjct: 151 GLPPGVSSARALRG---RAAVLADVARMPPVAPPGTRVIYSDINYVALGVIVERVTGRPL 207
Query: 161 DVILKDQVWKPWGMTETKFGP-----VELAVPTVRG--VEAGIVHDPKARLLGRHAGSAG 213
D V+ P M F P +A VR + G VHDP A +G AG+AG
Sbjct: 208 DAWCAKHVFTPLHMANATFRPRAATLSRIAPTVVRDGRLLRGRVHDPIAAAMGGVAGNAG 267
Query: 214 LFSTIKDLQIFLEHYLAD---DFARDLN-------QNFSPLDDK--ERSLAWNLE----- 256
LF++ DL F + L D +R L+ + + LD K R+ W+L+
Sbjct: 268 LFASAGDLARFAQMLLNDGRLGASRVLSRASVAALETPATLDAKGDARTAGWDLQPPLVA 327
Query: 257 -------GDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMNLI 307
L H GYTGT + + I L++R Y DER R QV+ L+
Sbjct: 328 NRYRLPPAGLLQHLGYTGTGLWIDLVTHRFVIVLTSRLY-PDERGDAAPLREQVLGLV 384
>gi|48477091|ref|YP_022797.1| beta lactamase [Picrophilus torridus DSM 9790]
gi|48429739|gb|AAT42604.1| beta lactamase [Picrophilus torridus DSM 9790]
Length = 351
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 89/333 (26%), Positives = 140/333 (42%), Gaps = 73/333 (21%)
Query: 7 IKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVG 66
I ++ I AGI Y F+ G PE + +++DLASV+KV
Sbjct: 16 IPEVSTLISAGIMKDGEIKYLG------FHGGI--PELNIYNCDKMLFDLASVTKVAVTS 67
Query: 67 TVCTFLWEIGQLDI-DRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKE 125
+ L + G++ + D L + + +TIR L+TH + + P
Sbjct: 68 MLVMKLLDAGRIALEDNLKSLGMDIDNISGLTIRSLITHTSGIIGNFP------------ 115
Query: 126 AMFHLNRRSQPAFL-----------------YSDVHFLLLGFILERIFNQDLDVILKDQV 168
HL RS+ +L YSD++++LLGF+LE I+ + LD+I + ++
Sbjct: 116 --LHLYGRSKSDYLRIISILARDSVMYKKEVYSDINYILLGFVLENIYGKPLDLIAEQEL 173
Query: 169 WKPWGMTETKFGPV--ELAVPT----VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQ 222
++P + T F P+ E+ PT RG+ G VHD KA LG AG AGLFS + D+
Sbjct: 174 FRPLSLKNTFFNPMNHEMTAPTEIDAARGLIHGTVHDEKAYGLGGVAGHAGLFSNVNDIL 233
Query: 223 IFL---------------------EHYLADDFARDLNQNFSPLDDKERSLAWN-LEGDWL 260
+ YL FA S ++ GD+
Sbjct: 234 NYFNAFINYKIISRRTFDLMVKPQNEYLGGIFANGWMVKLPRKRHVSESFGYSYFMGDYS 293
Query: 261 D-----HTGYTGTFIMWNRQKQEATIFLSNRTY 288
D HTG+TGT + + + + + L+NR Y
Sbjct: 294 DYYTIGHTGFTGTSVCIDYKNKIIAVLLTNRVY 326
>gi|15832555|ref|NP_311328.1| hypothetical protein ECs3301 [Escherichia coli O157:H7 str. Sakai]
gi|23822358|sp|Q8XBJ0|YFEW_ECO57 UPF0214 protein yfeW precursor
gi|13362771|dbj|BAB36724.1| putative beta-lactamase [Escherichia coli O157:H7 str. Sakai]
Length = 434
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 93/352 (26%), Positives = 153/352 (43%), Gaps = 74/352 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ------W--TEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I +Q++AG YPG + KDNQ W + Y G ++ G +YDLAS +K
Sbjct: 47 ISQQVDAG-YPGVNLLIIKDNQIVYRKAWGAAKKYDGSVLMAQPVKATTGTLYDLASNTK 105
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G+L D L+ ++ +D P+ TI+ LL H+ DP
Sbjct: 106 MYATNFALQKLMSEGKLHPDDLIAKYISGFADSPNDTIKGKNTLRISDLLHHSGGFPADP 165
Query: 111 FIPNRDLLTA--PELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+ + A + K + +R+ QP +YSDV ++LLGFI+E + Q LD
Sbjct: 166 QYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDR 225
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
+++ +++P G+T T F P+ ++A + G G++H P R
Sbjct: 226 YVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTHWGQVHDE 285
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYL-------ADDFARDLNQNF--SPLDDKERS 250
+G +G AGLFS D+ + ++ L F+ + + F S +D
Sbjct: 286 KAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFSAETVKMFTTSSKEDATFG 345
Query: 251 LAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + + A + LSN+ +
Sbjct: 346 LGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPH 397
>gi|15802961|ref|NP_288991.1| hypothetical protein Z3695 [Escherichia coli O157:H7 EDL933]
gi|12516808|gb|AAG57548.1|AE005473_3 putative beta-lactamase [Escherichia coli O157:H7 EDL933]
Length = 430
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 93/352 (26%), Positives = 153/352 (43%), Gaps = 74/352 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ------W--TEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I +Q++AG YPG + KDNQ W + Y G ++ G +YDLAS +K
Sbjct: 43 ISQQVDAG-YPGVNLLIIKDNQIVYRKAWGAAKKYDGSVLMAQPVKATTGTLYDLASNTK 101
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G+L D L+ ++ +D P+ TI+ LL H+ DP
Sbjct: 102 MYATNFALQKLMSEGKLHPDDLIAKYISGFADSPNDTIKGKNTLRISDLLHHSGGFPADP 161
Query: 111 FIPNRDLLTA--PELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+ + A + K + +R+ QP +YSDV ++LLGFI+E + Q LD
Sbjct: 162 QYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDR 221
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
+++ +++P G+T T F P+ ++A + G G++H P R
Sbjct: 222 YVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTHWGQVHDE 281
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYL-------ADDFARDLNQNF--SPLDDKERS 250
+G +G AGLFS D+ + ++ L F+ + + F S +D
Sbjct: 282 KAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFSAETVKMFTTSSKEDATFG 341
Query: 251 LAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + + A + LSN+ +
Sbjct: 342 LGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPH 393
>gi|94969642|ref|YP_591690.1| Uncharacterised conserved protein UCP016719 [Acidobacteria
bacterium Ellin345]
gi|94551692|gb|ABF41616.1| Uncharacterised conserved protein UCP016719 [Acidobacteria
bacterium Ellin345]
Length = 793
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 71/278 (25%), Positives = 137/278 (49%), Gaps = 47/278 (16%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
++D+AS++KV+ + L++ G++ + V ++P+ + DIT+R L+TH + L
Sbjct: 86 IFDMASLTKVIATTSSLMKLFDQGKIKLADPVSRYIPDFAANGKQDITVRDLMTHYSGLQ 145
Query: 110 PFIPNRDLLTAPELKEAMFHLNRRSQPA---FLYSDVHFLLLGFILERIFNQDLDVILKD 166
P + + + + + + + PA F YSD++F++LG +++++ + L+ K+
Sbjct: 146 PDLELKPYWSGLDEGYKRANAEKPTSPAGSVFRYSDINFIVLGEMVQKLSGEPLERYAKE 205
Query: 167 QVWKPWGMTET----------KFGPVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFS 216
++++P GM T K P E+ T + + G VHDP +R++G AG AGLFS
Sbjct: 206 RIFEPLGMDHTQYLPPASWRDKIAPTEVDERTGQMLR-GTVHDPTSRMMGGVAGHAGLFS 264
Query: 217 TIKDLQIFLEHYLADDFARDLNQNFSPLDDKE-------------RSLAWNLEGDW---- 259
T D+ F + L +D + +SPL ++ R L W+++ +
Sbjct: 265 TADDVAKFAQAILDND-----GRIWSPLTVEKMTTPQQPQGQPWLRGLGWDIDSPYATNR 319
Query: 260 --------LDHTGYTGTFIMWNRQKQEATIFLSNRTYE 289
HTG+TGT + + + I L+N ++
Sbjct: 320 GELLPVGSFGHTGFTGTSLWIDPTTKTYIILLTNAVHQ 357
>gi|75196443|ref|ZP_00706513.1| COG1680: Beta-lactamase class C and other penicillin binding
proteins [Escherichia coli HS]
Length = 430
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 93/352 (26%), Positives = 152/352 (43%), Gaps = 74/352 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ------W--TEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I +Q++ G YPG + KDNQ W + Y G E ++ G +YDLAS +K
Sbjct: 43 ISQQVDVG-YPGVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTK 101
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G+L D + ++P +D P+ TI+ LL H+ DP
Sbjct: 102 MYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADP 161
Query: 111 FIPNRDLLTAP--ELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+ + A + K + +R+ QP +YSDV ++LLGFI+E + Q LD
Sbjct: 162 QYPNKAVAGALYYQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDR 221
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
+++ +++P G+T T F P+ ++A + G G++H P R
Sbjct: 222 YVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDE 281
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYL-------ADDFARDLNQNF--SPLDDKERS 250
+G +G AGLFS D+ + ++ L F + + F S +D
Sbjct: 282 KAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFG 341
Query: 251 LAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + + A + LSN+ +
Sbjct: 342 LGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPH 393
>gi|157067576|gb|ABV06831.1| beta-lactamase [Escherichia coli HS]
Length = 434
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 93/352 (26%), Positives = 152/352 (43%), Gaps = 74/352 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ------W--TEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I +Q++ G YPG + KDNQ W + Y G E ++ G +YDLAS +K
Sbjct: 47 ISQQVDVG-YPGVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTK 105
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G+L D + ++P +D P+ TI+ LL H+ DP
Sbjct: 106 MYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADP 165
Query: 111 FIPNRDLLTAP--ELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+ + A + K + +R+ QP +YSDV ++LLGFI+E + Q LD
Sbjct: 166 QYPNKAVAGALYYQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDR 225
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
+++ +++P G+T T F P+ ++A + G G++H P R
Sbjct: 226 YVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDE 285
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYL-------ADDFARDLNQNF--SPLDDKERS 250
+G +G AGLFS D+ + ++ L F + + F S +D
Sbjct: 286 KAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFG 345
Query: 251 LAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + + A + LSN+ +
Sbjct: 346 LGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPH 397
>gi|67918672|ref|ZP_00512267.1| Beta-lactamase [Chlorobium limicola DSM 245]
gi|67783711|gb|EAM43095.1| Beta-lactamase [Chlorobium limicola DSM 245]
Length = 379
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 94/323 (29%), Positives = 141/323 (43%), Gaps = 43/323 (13%)
Query: 11 EEQIEAGIYPGASFAYFKDNQWTEFYLG---QSDPEHGLQTEAGLVYDLASVSKVVGVGT 67
E + G++PG S A + T F+ QS + +YDLAS++K V
Sbjct: 37 EAAVRDGVFPGTSIAVIHHGK-TVFHRAFGRQSFSADSPAADTTTIYDLASLTKAVVTTG 95
Query: 68 VCTFLWEIGQLDIDRLVIDFLP---ESDYPDITIRQLLTHATDLDPF-IPNRDLLTAPEL 123
+ L E L++D V ++P +TIR L+ H + L + ++ T E+
Sbjct: 96 IVMQLVERDSLNLDAPVSRYMPAFASRGKQQVTIRNLMLHNSGLRAHTLFHKTCRTPEEV 155
Query: 124 KEAMFHLNRRSQPAF--LYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGP 181
A+ S P LYSD+ F+ LG I+E + + L+ + + P GM T F P
Sbjct: 156 FRAIAADTLLSPPGIKTLYSDLGFITLGRIVETVTGRTLEANFRQRFALPLGMRRTMFNP 215
Query: 182 VELAVPTVRGVEAG----------IVHDPKARLLGRHAGSAGLFSTIKDLQIFLEH---- 227
++ E +VHD A LLG AG AGLFST DL ++
Sbjct: 216 PASLFSSIAPTEQDTSWHSSLRRPLVHDQNAALLGGVAGHAGLFSTTGDLIPYVRMLMQK 275
Query: 228 --YLADDFAR-DLNQNFSPLDDKE-RSLAWN---LEG-----------DWLDHTGYTGTF 269
Y +AR + + F+ + K+ R+L W+ LEG W H G+TGT
Sbjct: 276 GLYEGKPYARPETVRMFTSRNGKDSRTLGWDLRSLEGASSAGSAFSTSSW-GHLGFTGTS 334
Query: 270 IMWNRQKQEATIFLSNRTYEKDE 292
I + +K A I LSNR + E
Sbjct: 335 IWVDPEKDLAVIMLSNRVHPTSE 357
>gi|21225520|ref|NP_631299.1| secreted protein [Streptomyces coelicolor A3(2)]
gi|8388747|emb|CAB94057.1| putative secreted protein [Streptomyces coelicolor A3(2)]
Length = 597
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 48/291 (16%)
Query: 42 PEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITI 98
P+ + G V+DLAS+SK+ + E G L++ V +LP+ + ++TI
Sbjct: 128 PDEQIPMTGGTVFDLASISKLF-TSILAVQQLERGALELATPVASYLPDFGRAGKQNMTI 186
Query: 99 RQLLTHATDLDPFIPNRDLLTAPELKEAMFHLNRRSQP--AFLYSDVHFLLLGFILERIF 156
R LLTH + +IP T E + ++ S P A+LYSD++ + L +LE +
Sbjct: 187 RHLLTHTSGFRAWIPLYSAPTYEEKVQLVYDEAPVSAPGTAYLYSDLNMISLQLVLEEVT 246
Query: 157 NQDLDVILKDQVWKPWGMTETKFGPVELAVPTV--------------RGVEAGIVHDPKA 202
+ LDV+L++++ KP G+T T++ P P + RG+ G VHD A
Sbjct: 247 GRTLDVLLREEITKPLGLTRTRYNPPASWRPGIAATEDARKPWSGLDRGLVWGEVHDENA 306
Query: 203 RLLGRHAGSAGLFSTIKDLQIFLEHYL-ADDFAR--------------DLNQNFSPLDDK 247
LG AG AG+FS DL + L + R D N +F P D
Sbjct: 307 FSLGGVAGHAGVFSCAWDLAVLGRTLLNGGSYGRARILRPESVELMFTDFNTDF-PGD-- 363
Query: 248 ERSLAWNLEGDWL----------DHTGYTGTFIMWNRQKQEATIFLSNRTY 288
E L + L W HTG+TGT ++ + + L N +
Sbjct: 364 EHGLGFELYQHWYMGAMATPRTAGHTGFTGTSLVLDPTTDSFLVVLGNSVH 414
>gi|126652885|ref|ZP_01725028.1| penicillin binding protein [Bacillus sp. B14905]
gi|126590305|gb|EAZ84426.1| penicillin binding protein [Bacillus sp. B14905]
Length = 344
Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 87/272 (31%), Positives = 128/272 (47%), Gaps = 44/272 (16%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHAT----DL 108
++D+AS++KVV L Q+ +D V +LP Y ++TI LL H + DL
Sbjct: 57 LFDVASLTKVVATLPATLLLLSRQQMTVDDKVQTYLPNFKYANMTILHLLQHNSGLPADL 116
Query: 109 DPFIP---NRDLLTAPELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVI 163
P + RD++T + +F QP LYSD+ +LLG ++E++ + L
Sbjct: 117 MPVVKRQHQRDIMTEIFSSKVVF------QPGEQVLYSDLGMILLGKVIEKVSGRSLSQF 170
Query: 164 LKDQVWKPWGMTETKFGPVE----LAVPTV---RGVEAGIVHDPKARLLGRHAGSAGLFS 216
++ ++ KPWGM T+F E LA T R GIVHD K+ LL AGSAGLFS
Sbjct: 171 VEQEILKPWGMKHTRFQLPEHQQALAASTEMVDRKFVQGIVHDEKSLLLEGVAGSAGLFS 230
Query: 217 TIKDLQIFLEHYLADDFARDLNQNFSPLDD----KERSLA---WNLEGDW---------- 259
+DL F E +L L + L + R L WN GD+
Sbjct: 231 CAEDLAKFAEIWLGFTQQDVLPYEWLELAHTKTFRNRGLGFEVWN--GDYSSSCFARRWS 288
Query: 260 ---LDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
H+G+TGT I + ++ IFL+N +
Sbjct: 289 KGSFGHSGFTGTSIWMDPVEKAFVIFLTNAVH 320
>gi|78222174|ref|YP_383921.1| Beta-lactamase [Geobacter metallireducens GS-15]
gi|78193429|gb|ABB31196.1| Beta-lactamase [Geobacter metallireducens GS-15]
Length = 416
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 86/300 (28%), Positives = 129/300 (43%), Gaps = 42/300 (14%)
Query: 34 EFYLGQSDPEHG-LQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE-- 90
E G+ E G L ++D+AS++KVV V L E G+L + V + PE
Sbjct: 85 ESAFGRVSGESGALPVSTETIFDVASLTKVVATAPVVMGLVEQGRLSLADPVTRWFPEFA 144
Query: 91 -SDYPDITIRQLLTHATDLD--PFIPNRDLLTAPELKEAMFHLNRRSQPA--FLYSDVHF 145
+ + LLTH + LD P + LL+A E + + +P F Y+D++F
Sbjct: 145 GKGKDGVLVEHLLTHTSGLDDFPLSASSPLLSA---LEGVARQKLKGEPGHRFRYADINF 201
Query: 146 LLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELAVPTVR-------GVEAGIVH 198
+LLG ++ R+ LD ++ + V+ P MT T F P A G + G V
Sbjct: 202 ILLGELVRRVTGTPLDRVVSETVYGPLAMTATCFNPGPAAAGRCAATLDVGGGPQFGKVQ 261
Query: 199 DPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADD--------FARDLNQ----NFSPLDD 246
D ARLL AG AG+F+T DL F L D A L Q +FS
Sbjct: 262 DTTARLLDGVAGHAGIFTTAGDLARFCRMILGDGELDGQRVLAAPTLRQMAAPHFSRGGT 321
Query: 247 KERSLAWNLEGDW------------LDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERA 294
R L W++ + HTGY+G+ + + + + LS+R + RA
Sbjct: 322 VRRGLGWDIASPYSSPKGRGFSEASFGHTGYSGSSLWIDPENDVFVVLLSSRLDYRSTRA 381
>gi|83815520|ref|YP_444518.1| beta-N-acetylglucosaminidase [Salinibacter ruber DSM 13855]
gi|83756914|gb|ABC45027.1| beta-N-acetylglucosaminidase [Salinibacter ruber DSM 13855]
Length = 979
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 88/313 (28%), Positives = 135/313 (43%), Gaps = 39/313 (12%)
Query: 17 GIYPGASFAYFKDNQWTEF-YLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEI 75
G +PGA+ A + G + + G YDLAS++KVV T L+E
Sbjct: 633 GAFPGAAVAVGRGPALARLDAYGYHTYDETKPVQTGTQYDLASLTKVVATTTAVMKLYEA 692
Query: 76 GQLDIDRLVIDFLP---ESDYPDITIRQLLTHATDLDPFI-PNRDLLTAPELKEAMFHLN 131
L++D V +LP ++ +T+RQLLTH++ L P++ P+ T L + +
Sbjct: 693 DSLELDAPVARYLPDFAQNGKEAVTVRQLLTHSSGLKPYLDPDERGPTRAALLDTLMAQP 752
Query: 132 RRSQPAF--LYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELA---- 185
P YS ++ + L I+E I + D + +++P GM +T F ++
Sbjct: 753 LTYTPGTRSTYSGLNAIALMRIVETISGRPFDAFCRTHIFEPLGMDQTGFYDTDVTRAWV 812
Query: 186 VPTVRGV---EAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFS 242
PT G VHDP AR + +G+AGLFST DL F + L + D Q
Sbjct: 813 APTTDTAGTRRRGSVHDPMARDMDGVSGNAGLFSTAADLARF-GYMLTHEGRIDGRQFLE 871
Query: 243 P-----------LDDKERSLAWNLE--------GDWLD-----HTGYTGTFIMWNRQKQE 278
P + R+L W+ + GD HTGYTGT + +
Sbjct: 872 PKTIETFTAQADVPGSTRALGWDTKSAEGYSSAGDEFSAASFGHTGYTGTSFWVDPAEDL 931
Query: 279 ATIFLSNRTYEKD 291
+ L+NR Y D
Sbjct: 932 FFVLLTNRVYPDD 944
>gi|94969643|ref|YP_591691.1| beta-lactamase [Acidobacteria bacterium Ellin345]
gi|94551693|gb|ABF41617.1| beta-lactamase [Acidobacteria bacterium Ellin345]
Length = 366
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 90/314 (28%), Positives = 136/314 (43%), Gaps = 50/314 (15%)
Query: 18 IYPGASFAYFKDNQ---WTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWE 74
+ PGA+ A + W F DPE L ++DLASV+K V T+ L E
Sbjct: 32 VMPGATIAVTHGGRMMAWEAFGRFTYDPESPL-VRRETIFDLASVTKAVATTTIAAILHE 90
Query: 75 IGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPF-------IPNRDLLTAPELK 124
GQL++++ V + E D+TI LL+H++ L + DLL +
Sbjct: 91 RGQLNLNQKVHEHFREFRDGGKSDVTIAMLLSHSSGLPSYEKLFQRCRSREDLLGSAAAA 150
Query: 125 EAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPV-- 182
+ RS+ YSD+ F+LLG IL RI +DLD +++ P GMT ++ P
Sbjct: 151 PLAYPPGARSE----YSDLAFILLGEILTRIAGEDLDGFAAREIFAPLGMTTAEYCPAPE 206
Query: 183 -ELAVPTV--------RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL---- 229
+P R ++ G + D A ++G AG AGLF+ DL +F E L
Sbjct: 207 GRQEIPPAQDDREFRHRTIQ-GEIDDENASVMGGVAGHAGLFANAYDLALFAECMLRGGA 265
Query: 230 ----ADDFARDLNQNFSPLDDKERSLAWN-----------LEGDWLDHTGYTGTFIMWNR 274
+ N+ +P SL W+ L H G+TGT + +
Sbjct: 266 PILKPETVQLFTNRRAAPY-GTSFSLGWDTPSQPSQSGTKLSARAFGHLGFTGTSLWIDP 324
Query: 275 QKQEATIFLSNRTY 288
KQ + L+NRT+
Sbjct: 325 VKQLSITLLTNRTW 338
>gi|75515775|ref|ZP_00737910.1| COG1680: Beta-lactamase class C and other penicillin binding
proteins [Escherichia coli 53638]
Length = 430
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 92/352 (26%), Positives = 151/352 (42%), Gaps = 74/352 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ------W--TEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I +Q++ G YPG + KDNQ W + Y G E ++ G +YDLAS +K
Sbjct: 43 ISQQVDVG-YPGVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTK 101
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G+L D + ++P +D P+ TI+ LL H+ DP
Sbjct: 102 MYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADP 161
Query: 111 FIPNRDLLTAP--ELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+ + A + K + +R+ QP +YSDV ++LLGFI+E + Q LD
Sbjct: 162 QYPNKAVAGALYYQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDR 221
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
+++ +++P G+T T F P+ ++A + G G++H P R
Sbjct: 222 YVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDE 281
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYL-------ADDFARDLNQNF--SPLDDKERS 250
+G +G AGLFS D+ + ++ L F + + F S +D
Sbjct: 282 KAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFG 341
Query: 251 LAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + + + LSN+ +
Sbjct: 342 LGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMTIVMLSNKPH 393
>gi|108803472|ref|YP_643409.1| beta-lactamase [Rubrobacter xylanophilus DSM 9941]
gi|108764715|gb|ABG03597.1| beta-lactamase [Rubrobacter xylanophilus DSM 9941]
Length = 566
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 78/274 (28%), Positives = 126/274 (45%), Gaps = 39/274 (14%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLP---ESDYPDITIRQLLTHATDLD 109
++DLAS+SK+ L E G+LD+D V ++P ++ D+T++QLL H + L
Sbjct: 112 IFDLASISKLF-TSIAAVQLVERGKLDLDAPVASYIPKFAQNGKEDVTVQQLLAHTSGLP 170
Query: 110 PFIPNRDLLTAPELKEAMFHLNRRSQPA---FLYSDVHFLLLGFILERIFNQDLDVILKD 166
++P PE + + PA + YSD++ + LG ++E + Q LDV +
Sbjct: 171 AWLPLYSRYDTPEERLQAVYAVEPEAPAGTQYRYSDLNMITLGELVELLSGQTLDVFVAQ 230
Query: 167 QVWKPWGMTETKFGP----------VELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFS 216
+ +P GM +T + P E T RG+ G VHD A LG AG AG+F
Sbjct: 231 NITEPLGMRDTGYSPPSSKLDRIAATEYQPWTNRGMIRGSVHDENAWSLGGVAGHAGVFG 290
Query: 217 TIKDLQIFLE-----------HYLADDFARDLNQNFS-PLDDKERSLAWNL-EGDWLD-- 261
T +DL + + L R+L N + + L + L + ++D
Sbjct: 291 TARDLAVLAQTILNGGSYGGSRILKPQSVRELLTNHNREFPGNDHGLGFELYQHRYMDAM 350
Query: 262 -------HTGYTGTFIMWNRQKQEATIFLSNRTY 288
HTGYTGT ++ + + I L+NR +
Sbjct: 351 ATPSTAGHTGYTGTSLVIDPLDRSFAILLTNRVH 384
>gi|84495173|ref|ZP_00994292.1| putative beta-lactamase [Janibacter sp. HTCC2649]
gi|84384666|gb|EAQ00546.1| putative beta-lactamase [Janibacter sp. HTCC2649]
Length = 574
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 77/275 (28%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
++D+ASVSK+ V + E G++ ++ V ++LPE + +TIR LLTH +
Sbjct: 125 IFDMASVSKLFTSIAVVQLIEE-GRVGLETAVAEYLPEFGAAGKEAVTIRHLLTHTSGFV 183
Query: 110 PFIPNRDLLTAPELKEAMFHLNRRSQPA---FLYSDVHFLLLGFILERIFNQDLDVILKD 166
++P + A + P +LYSD++ + LG ++ER+ Q LD ++
Sbjct: 184 AWLPLYSKYPDKASRIAAVMNQPLTNPVGTVYLYSDLNLITLGVLVERLRGQSLDEVVGA 243
Query: 167 QVWKPWGMTETKFGP--------VELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTI 218
++ +P GM +T + P E RG+ G VHD + L AG AG+FST+
Sbjct: 244 RITRPLGMKDTGYNPAVKERTAATEYQAVPARGMVWGEVHDENSWSLDGVAGHAGVFSTV 303
Query: 219 KDLQIFLEHYLADDFAR---------------DLNQNFSPLDDKERSLAWNLEGDWL--- 260
D+ + + L R + NQ F P DD L + L W
Sbjct: 304 DDMAVLSQALLNGGTHRGARILDRKSVSLLITNFNQAF-PGDD--HGLGFELNQTWYMDA 360
Query: 261 -------DHTGYTGTFIMWNRQKQEATIFLSNRTY 288
HTGYTGT I+ + + + L+NR +
Sbjct: 361 LSGPRTAGHTGYTGTSIVIDFTSRSFAVLLTNRVH 395
>gi|157081842|gb|ABV11520.1| hypothetical protein CKO_00357 [Citrobacter koseri ATCC BAA-895]
Length = 434
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 94/354 (26%), Positives = 152/354 (42%), Gaps = 78/354 (22%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ------WTEF--YLGQSDPEHGLQTEAGLVYDLASVSK 61
I +Q++AG YP + KD+ W + Y G H ++ +YDLAS +K
Sbjct: 47 IAQQVDAG-YPSVNLLIIKDSHIVYRKAWGQAKKYDGSVLMSHPIKATTDTLYDLASNTK 105
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYP--------DITIRQLLTHATDL--DP 110
+ L G+L D L+ ++P+ D P + I LL H+ DP
Sbjct: 106 MYATNFALQKLMSEGKLQPDDLISKYIPDFGDRPGDAIKGKSTLRIADLLHHSGGFPADP 165
Query: 111 FIPNRDLLTAPEL----KEAMFHLNRRSQPAF------LYSDVHFLLLGFILERIFNQDL 160
PN+ + A EL K + +R+ A+ +YSDV ++LLGFI+E + Q L
Sbjct: 166 QYPNQAV--AGELYSQDKATTLEMIKRTPLAYPPGTKHIYSDVDYMLLGFIVESVTGQPL 223
Query: 161 DVILKDQVWKPWGMTETKFGPVE---------------------LAVPTVRGVEA-GIVH 198
D +++ +++P G+T T F P++ + P +R G VH
Sbjct: 224 DRYVEENLYRPLGLTHTVFNPLQKGFRQQQIAATELNGNTRDGVIHFPNIRTTTLWGQVH 283
Query: 199 DPKARL-LGRHAGSAGLFSTIKDLQIFLEHYLADD-------FARDLNQNF--SPLDDKE 248
D KA +G +G AGLFS D+ + ++ L F+ + + F S +D
Sbjct: 284 DEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGNVTLFSPETVKMFTQSSPEDAT 343
Query: 249 RSLAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + + Q A + LSN+ +
Sbjct: 344 FGLGWRVNGNASMTPTFGTLASAQAYGHTGWTGTLTVIDPANQMAIVMLSNKPH 397
>gi|124531844|ref|ZP_01701951.1| beta-lactamase [Escherichia coli B]
gi|124498327|gb|EAY45844.1| beta-lactamase [Escherichia coli B]
Length = 463
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 92/352 (26%), Positives = 151/352 (42%), Gaps = 74/352 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ------W--TEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I +Q++ G YPG + KDNQ W + Y G E ++ G +YDLAS +K
Sbjct: 76 ISQQVDVG-YPGVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTK 134
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G+L D + ++P +D P+ TI+ LL H+ DP
Sbjct: 135 MYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADP 194
Query: 111 FIPNRDLLTAP--ELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+ + A + K + +R+ QP +YSDV ++LLGFI+E + Q LD
Sbjct: 195 QYPNKAVAGALYYQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDR 254
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
+++ +++P G+T T F P+ ++A + G G++H P R
Sbjct: 255 YVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDE 314
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYL-------ADDFARDLNQNF--SPLDDKERS 250
+G +G AGLFS D+ + ++ L F + + F S +D
Sbjct: 315 KAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFG 374
Query: 251 LAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + + + LSN+ +
Sbjct: 375 LGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMTIVMLSNKPH 426
>gi|89109244|ref|AP_003024.1| predicted periplasmic esterase [Escherichia coli W3110]
gi|90111432|ref|NP_416925.2| predicted periplasmic esterase [Escherichia coli K12]
gi|3915467|sp|P77619|YFEW_ECOLI UPF0214 protein yfeW precursor
gi|85675401|dbj|BAA16314.2| predicted periplasmic esterase [Escherichia coli W3110]
gi|87082101|gb|AAC75483.2| predicted periplasmic esterase [Escherichia coli K12]
Length = 434
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 91/352 (25%), Positives = 150/352 (42%), Gaps = 74/352 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ------W--TEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I +Q++ G YP + KDNQ W + Y G E ++ G +YDLAS +K
Sbjct: 47 ISQQVDVG-YPSVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTK 105
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G+L D + ++P +D P+ TI+ LL H+ DP
Sbjct: 106 MYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADP 165
Query: 111 FIPNRDLLTA--PELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+ + A + K + +R+ QP +YSDV ++LLGFI+E + Q LD
Sbjct: 166 QYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDR 225
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
+++ +++P G+T T F P+ ++A + G G++H P R
Sbjct: 226 YVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDE 285
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYL-------ADDFARDLNQNF--SPLDDKERS 250
+G +G AGLFS D+ + ++ L F + + F S +D
Sbjct: 286 KAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFG 345
Query: 251 LAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + + + LSN+ +
Sbjct: 346 LGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMTIVMLSNKPH 397
>gi|126348156|emb|CAJ89877.1| putative beta-lactamase [Streptomyces ambofaciens ATCC 23877]
Length = 591
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 81/280 (28%), Positives = 124/280 (44%), Gaps = 48/280 (17%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
V+DLAS+SK+ + E G L+++ V +LP+ + D+T+RQLLTH +
Sbjct: 133 VFDLASISKLF-TSILAVQQLERGALELEEPVASYLPDFGRAGKQDVTVRQLLTHTSGFR 191
Query: 110 PFIPNRDLLTAPELKEAMFHLNRRSQP--AFLYSDVHFLLLGFILERIFNQDLDVILKDQ 167
+IP T E E ++ S P A+LYSD++ + L +LE + + LDV+L+ +
Sbjct: 192 AWIPLYGAPTREEKIELVYDQAPVSPPGTAYLYSDLNLISLQLVLEEVTGRPLDVLLRAE 251
Query: 168 VWKPWGMTETKFGPVELAVPTV--------------RGVEAGIVHDPKARLLGRHAGSAG 213
+ P G+ T++ P P + RG+ G VHD A LG AG AG
Sbjct: 252 ITAPLGLRRTRYNPPASWRPRIAATEDARLPWSGLDRGLVWGEVHDENAFSLGGVAGHAG 311
Query: 214 LFSTIKDLQIFLEHYL-ADDFAR--------------DLNQNFSPLDDKERSLAWNLEGD 258
+FS DL + L + R D N +F P D E L + L
Sbjct: 312 VFSCAWDLAVLGRALLNGGSYGRERILRPESVELMFTDFNTDF-PGD--EHGLGFELYQH 368
Query: 259 WL----------DHTGYTGTFIMWNRQKQEATIFLSNRTY 288
W HTG+TGT ++ + + L N +
Sbjct: 369 WYMGAMATPRTAGHTGFTGTSLVLDPTTDSFLVVLGNSVH 408
>gi|78188455|ref|YP_378793.1| D-alanyl-D-alanine carboxypeptidease, putative [Chlorobium
chlorochromatii CaD3]
gi|78170654|gb|ABB27750.1| D-alanyl-D-alanine carboxypeptidease, putative [Chlorobium
chlorochromatii CaD3]
Length = 385
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 94/325 (28%), Positives = 138/325 (42%), Gaps = 46/325 (14%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLV-----YDLASVSKVVG 64
+++ + ++PGAS A ++ F+ G H Q + +V YDLAS++KVV
Sbjct: 41 MQQAVRDSVFPGASIAVLHRDK-VVFHKGFG--RHTYQPSSTVVDTTTIYDLASLTKVVA 97
Query: 65 VGTVCTFLWEIGQLDIDRLVIDFLP---ESDYPDITIRQLLTHATDLDPFIP-NRDLLTA 120
+ L E L + V +LP + +TI QLL H + L TA
Sbjct: 98 TTNMVMQLVERDSLKLHEPVATYLPTFAQRGKDRVTIEQLLRHTSGLRAHEHYGETCKTA 157
Query: 121 PELKEAMFHLNRRSQPAFL--YSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETK 178
+ ++ S P + YSD+ F+LLG I+E+ L + KP GM T
Sbjct: 158 NGVFNTIYDDTLLSAPGSVTRYSDLGFMLLGKIIEQQTGASLAANFNQRFAKPLGMANTM 217
Query: 179 FGPVELAVPTVRGVEAG----------IVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHY 228
F P + VEA +VHD LLG AG AGLF T DL + +
Sbjct: 218 FTPPTFLYDRIAPVEADNNWHLTTTRPLVHDQNCALLGGVAGHAGLFGTTNDLIGMVRMW 277
Query: 229 LAD---DFARDL----NQNFSPLDDKERSLAWN-------------LEGDWLDHTGYTGT 268
+ + D R + ++ F+ ++ R+L W+ + H G+TGT
Sbjct: 278 MNEGKVDGKRYVKAATHRAFTKQENTARALGWDKRSAQGYSSAGTRFSMESYGHLGFTGT 337
Query: 269 FIMWNRQKQE-ATIFLSNRTYEKDE 292
I W KQE A I LSNR Y E
Sbjct: 338 SI-WIDPKQELAVILLSNRVYPSSE 361
>gi|76260608|ref|ZP_00768241.1| Beta-lactamase [Chloroflexus aurantiacus J-10-fl]
gi|76164525|gb|EAO58672.1| Beta-lactamase [Chloroflexus aurantiacus J-10-fl]
Length = 349
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 38/273 (13%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFI 112
+YDLAS++KV T L + G L +D+ + +LP PDIT+R LL+H++ L +
Sbjct: 55 IYDLASLTKVF-TATAALRLHDAGMLPLDQPIQHWLPALHAPDITVRHLLSHSSGLTVQL 113
Query: 113 PNRDLLTAPELKEAMFHLNRRSQPAFL--YSDVHFLLLGFILERIFNQDLDVILKDQVWK 170
A ++ ++ R P + Y++++ LLLG ++ I+ L L + V
Sbjct: 114 APLARAGAATIRTMVYTATPRHPPGRIVEYANLNTLLLGDVVTAIYGGSLADALTELVCV 173
Query: 171 PWGMTETKFGPVELAVPTVR----------GVEAGIVHDPKARLLGRHAGSAGLF----S 216
P G+ +T+F P T+ G+ G+VHD LG AG AGLF
Sbjct: 174 PLGLHKTRFNPPTEWRATIAPTEWDWEWRGGLVHGVVHDESTYALGGVAGHAGLFGPAAE 233
Query: 217 TIKDLQIFLEHYLADDFARDLNQNFS--------PLDDKER---SLAWNLEGDWL----- 260
++ +Q+F++ D R L + + P D R L W L ++
Sbjct: 234 ALRLVQLFIQEGAWQD--RQLLRAGTALAALTPQPASDTSRLVSGLGWMLHRPYMGSAIH 291
Query: 261 ---DHTGYTGTFIMWNRQKQEATIFLSNRTYEK 290
H+G+TG ++ Q++ A + L NRTY K
Sbjct: 292 HGFGHSGFTGPLLIGIPQRRLAIVLLCNRTYPK 324
>gi|118579153|ref|YP_900403.1| beta-lactamase [Pelobacter propionicus DSM 2379]
gi|118501863|gb|ABK98345.1| beta-lactamase [Pelobacter propionicus DSM 2379]
Length = 392
Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 81/277 (29%), Positives = 128/277 (46%), Gaps = 39/277 (14%)
Query: 47 QTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLT 103
Q + ++DLAS++KV+ L E G++ + + + PE S DITI L+T
Sbjct: 78 QLDDATLFDLASLTKVLATTPAVMKLLEEGRISLMDPLTRWFPEFEGSGREDITILNLMT 137
Query: 104 HATDL-DPFIPNRDLLTAPELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDL 160
H + L D IP+ + A ++E R QP FLY+D++F+LLG +++R+ L
Sbjct: 138 HTSGLHDITIPSA-VPIATVIREVATQKTWR-QPGQHFLYADINFILLGELVQRVSGSRL 195
Query: 161 DVILKDQVWKPWGMTETKF-GPVELAV---PTVRGVE---AGIVHDPKARLLGRHAGSAG 213
DV ++ P G+ ET F P +L+ PT+ + +G+V D AR LG AG AG
Sbjct: 196 DVFCVQHIYAPLGLHETMFLPPPQLSTSVAPTLTNAQQFVSGVVQDTNARNLGGVAGHAG 255
Query: 214 LFSTIKDLQIFLEHYLADDF--------ARDLNQNFSPLDDKE----RSLAWNLEGDW-- 259
LF + D+ F L R + Q +P R L W++ +
Sbjct: 256 LFGSAYDMARFARLILCGGILDGHRIFSERTVAQMTAPYFYSNGRVVRGLGWDITSPYST 315
Query: 260 ----------LDHTGYTGTFIMWNRQKQEATIFLSNR 286
HTGY+G+ + + Q+ I L+ R
Sbjct: 316 PRGSYFSEMSFGHTGYSGSSLWIDPQRDLFAIVLTIR 352
>gi|110596850|ref|ZP_01385140.1| Beta-lactamase [Chlorobium ferrooxidans DSM 13031]
gi|110341537|gb|EAT59997.1| Beta-lactamase [Chlorobium ferrooxidans DSM 13031]
Length = 381
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 129/316 (40%), Gaps = 52/316 (16%)
Query: 18 IYPGASFAY-------FKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCT 70
++PGAS A F Y S P + +YDLAS++K + ++
Sbjct: 45 VFPGASLAVLYKGKVVFHKAFGKMTYAADSTP-----VDTTTIYDLASLTKAISTTSIVM 99
Query: 71 FLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIPNRDLLTAPE-LKEA 126
L E L + V +LP + +T+ QLL H + L +PE L
Sbjct: 100 QLVERDSLSLQAPVATYLPGFRVNGKERVTLEQLLRHNSGLRAHSYFAKSCRSPEELFNT 159
Query: 127 MFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVEL 184
+ + + S P LYSD F+LLG I+ I L + P GM T F P
Sbjct: 160 IENDSLLSPPGRTTLYSDPGFMLLGKIVATITGHSLAENFHARFAAPLGMHATMFTPP-- 217
Query: 185 AVPTVRGVEAG------------IVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADD 232
A R AG +VHD A LLG AG AGL+ST DL F +
Sbjct: 218 ATLLQRIAPAGQDGDWPFNTVRPLVHDQNAALLGGVAGHAGLYSTTGDLITFTGMLMHGG 277
Query: 233 -------FARDLNQNFSPLDDKERSLAWNLE--------GDWLD-----HTGYTGTFIMW 272
F ++ +NF + ER+L W+L GD+ H GYTGT I
Sbjct: 278 TSGRRIYFRKETLRNFLSRSNAERALGWDLRSIDGPSSAGDYFSTSSYGHLGYTGTSIWI 337
Query: 273 NRQKQEATIFLSNRTY 288
+ Q+ A I LSNR +
Sbjct: 338 DPQQDLAVILLSNRVW 353
>gi|52078659|ref|YP_077450.1| hypothetical protein BL02717 [Bacillus licheniformis ATCC 14580]
gi|52784021|ref|YP_089850.1| hypothetical protein BLi00188 [Bacillus licheniformis ATCC 14580]
gi|52001870|gb|AAU21812.1| putative beta-lactamase YbbE [Bacillus licheniformis ATCC 14580]
gi|52346523|gb|AAU39157.1| YbbE [Bacillus licheniformis DSM 13]
Length = 448
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 74/360 (20%)
Query: 2 KWTKIIKKIEEQIEAGIYPGASFAYFKDNQ--------WTEFYLGQSDPEHGLQTEAGLV 53
K + + IE+ ++AG +PGA+ KD + + + Y G +H + +A +
Sbjct: 53 KLKAVDRLIEQDVKAG-FPGAALILIKDGKIIKKEVYGYKQKYNGLIALKHPKKMKANTM 111
Query: 54 YDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTH 104
+DLAS +K+ V L G+LD+++ + +LP+ D+P+ ++ LL H
Sbjct: 112 FDLASNTKMYAVNFALQHLVSTGKLDLNKNISQYLPDFKDHPEDDVKGKNRLRVIDLLHH 171
Query: 105 ATDLDPFIPNRDLLTAPELK--------EAMFHLNRRSQPAF--LYSDVHFLLLGFILER 154
D +A L E + +P +YSD+ ++LLG I+E+
Sbjct: 172 NAGFPASWNYYDPKSAGHLYSQSRSKTLEYLVKTPLAYEPGTKQIYSDIDYMLLGLIIEK 231
Query: 155 IFNQDLDVILKDQVWKPWGMTETKFGPVE---------------------LAVPTVRGVE 193
I N+ LD ++++ ++P G+ T F P++ ++ P +R
Sbjct: 232 ITNERLDTFVENRFYRPLGLRHTLFNPLQKGFKRSHFAATERLGNTRDGTISFPNIRTYT 291
Query: 194 -AGIVHDPKARL-LGRHAGSAGLFSTIKDLQIFLEHYLADD-------FARDLNQNFSPL 244
G VHD KA + +G AGLFST+ D + L+ L F+ + F+
Sbjct: 292 LQGEVHDEKAFYSMEGVSGHAGLFSTVDDAAVLLQVMLNGGGYGRQHLFSSSVISQFTEP 351
Query: 245 DDKERS--LAWNLEG----DWL----------DHTGYTGTFIMWNRQKQEATIFLSNRTY 288
+ L W L G +W+ HTG+TGT + + Q + L+N+ +
Sbjct: 352 SKTNPTYGLGWRLNGNTDMEWMFGKHASSKAYGHTGWTGTVTIIDPVYQIGIVLLTNKKH 411
>gi|68553419|ref|ZP_00592794.1| Beta-lactamase [Prosthecochloris aestuarii DSM 271]
gi|68239683|gb|EAN21969.1| Beta-lactamase [Prosthecochloris aestuarii DSM 271]
Length = 381
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 88/320 (27%), Positives = 133/320 (41%), Gaps = 44/320 (13%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ--WTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGT 67
+ E I G++P AS A + + Q+ +YDLAS++K + +
Sbjct: 35 VNESIRDGVFPSASIAVIHKGTVVYHRAFGKQTYDRQSPPVTTTTIYDLASLTKPIVTTS 94
Query: 68 VCTFLWEIGQLDIDRLVIDFLP---ESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELK 124
+ L E LDI+ V +LP + ITI+ LL H + L +R + + +
Sbjct: 95 IAMQLVEHDSLDINAPVSHYLPGFARNGKEKITIKNLLLHNSGLRA---HRFFIESCKTP 151
Query: 125 EAMFHLNRRSQPAF------LYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETK 178
+ ++ P +YSD+ F+ LG ++E I L+ + P GM T
Sbjct: 152 DEVYEAISDETPIVPTGSKTIYSDLGFITLGNVIETITANTLEENFSARFSVPLGMHSTL 211
Query: 179 FGPVELAVPTVRGVEAG----------IVHDPKARLLGRHAGSAGLFSTIKDLQIF---- 224
F P + + E +VHD A LL AG AGLFST DL IF
Sbjct: 212 FTPSLTMLKNIAPTEKDSRWTLDIPRPLVHDHNAALLRGVAGHAGLFSTTGDLIIFATML 271
Query: 225 LEH--YLADDFAR-DLNQNFSPLDDKERSLAWNLE--------GDWLD-----HTGYTGT 268
++H Y F + + F+ R+L W+L GD H G+TGT
Sbjct: 272 MQHGSYGGKAFFKPETITTFTQRHPGSRALGWDLRSIDGPSSSGDHFSAKAYGHLGFTGT 331
Query: 269 FIMWNRQKQEATIFLSNRTY 288
I + +K A I L+NR Y
Sbjct: 332 SIWIDPEKDLAVITLTNRVY 351
>gi|51891440|ref|YP_074131.1| putative beta-lactamase [Symbiobacterium thermophilum IAM 14863]
gi|51855129|dbj|BAD39287.1| putative beta-lactamase [Symbiobacterium thermophilum IAM 14863]
Length = 383
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 94/329 (28%), Positives = 134/329 (40%), Gaps = 53/329 (16%)
Query: 7 IKKIEEQIEAGIYPGASFAYFKDNQ--------WTEFYLGQSDPEHGLQTEAGLVYDLAS 58
I +E +I A PGA +D + W Y PE L +DLAS
Sbjct: 38 IALLEAEIAAERLPGAVVVIARDGKVAVHRALGWAAVY-----PERRPMRPETL-FDLAS 91
Query: 59 VSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIPNR 115
++KV+ L E G + +D + F PE +I IR LLTH L PF
Sbjct: 92 LTKVIATLPAVLRLIERGDIRLDDPLHLFFPEYQGEGREEIRIRHLLTHTAGLQPFSQAL 151
Query: 116 DLLTAP--ELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKP 171
+ P EL + L + P +YSD+ F+LLG ++ R+ Q L+ +++QV P
Sbjct: 152 RDPSRPREELIARIATLPLEAPPGTRIIYSDLGFILLGELVARVSGQPLERFVQEQVHGP 211
Query: 172 WGMTETKFGPVELAVPTVRGVE---------AGIVHDPKARLLGRHAGSAGLFSTIKDLQ 222
G TET F P E G VHD A LG AG AGLFST ++
Sbjct: 212 LGFTETGFLPTGERAARAAATEYRERLGRYQCGEVHDETATALGGIAGHAGLFSTAPEVA 271
Query: 223 IFLEHYL---------ADDFARDLNQNFSPLDDKERSLAWNLE---------GDWLD--- 261
+ + +L A A +Q + R L W + GD
Sbjct: 272 AYGQMWLDGGAGVLSPAMVAAATRDQTPHIQGPEHRGLGWIVAREDSESLSCGDLFSPGS 331
Query: 262 --HTGYTGTFIMWNRQKQEATIFLSNRTY 288
HTG+TGT + + ++ L+NR +
Sbjct: 332 FGHTGFTGTSLWVDPHRRLVVALLTNRVH 360
>gi|21673163|ref|NP_661228.1| D-alanyl-D-alanine carboxypeptidease, putative [Chlorobium tepidum
TLS]
gi|21646242|gb|AAM71570.1| D-alanyl-D-alanine carboxypeptidease, putative [Chlorobium tepidum
TLS]
Length = 380
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 89/329 (27%), Positives = 133/329 (40%), Gaps = 57/329 (17%)
Query: 14 IEAGIYPGASFAYF---KDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCT 70
+ ++PGAS A K F DP+ + +YD AS++K V ++
Sbjct: 43 VHDSVFPGASLAVIYRGKTVYHKAFGRLTYDPQSA-PADTTTIYDAASLTKAVVTTSIAM 101
Query: 71 FLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFI-------PNRDLLTA 120
L E LD+ V +LP + ITI QL+ H + L P + D+ A
Sbjct: 102 QLVERDSLDLHAPVARYLPGFACNGKERITIEQLMRHTSGLRPHVFYAKTCRTPSDVFRA 161
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
E + ++ YSD++F+LLG I+E++ Q L + P GM T F
Sbjct: 162 IEQDSLTYRPGSETK----YSDLNFILLGRIIEKLTGQSLPANFHARFAAPLGMRSTLFN 217
Query: 181 P--------------VELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFL- 225
P +PT R +V+D A LLG AG AGLF+T DL +
Sbjct: 218 PPAGLRTRIAPTAPDTTWTLPTPR----PLVNDQNAALLGGAAGHAGLFTTTGDLIKMVR 273
Query: 226 ------EHYLADDFARDLNQNFSPLDDKERSLAWNL-------------EGDWLDHTGYT 266
E++ + F D R+L W++ W H G+T
Sbjct: 274 MLMNGGEYHGHRYIQAKTVRMFLRKTDAPRALGWDIITPGKSSAGTRFSANSW-GHLGFT 332
Query: 267 GTFIMWNRQKQEATIFLSNRTYEKDERAQ 295
GT I + +K A I LSNR + +E +
Sbjct: 333 GTSIWVDPEKDLAVILLSNRVWPTEENKK 361
>gi|42523428|ref|NP_968808.1| D-alanyl-D-alanine carboxypeptidease, putative [Bdellovibrio
bacteriovorus HD100]
gi|39575634|emb|CAE79801.1| D-alanyl-D-alanine carboxypeptidease, putative [Bdellovibrio
bacteriovorus HD100]
Length = 353
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 83/287 (28%), Positives = 132/287 (45%), Gaps = 48/287 (16%)
Query: 54 YDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIP 113
YDLAS++KV+ +E G+ + + V D LP + + I +LLTH++ L ++P
Sbjct: 48 YDLASLTKVIFTTQAMVQAFEAGKWNFETKVADLLPWFAHKETRITELLTHSSGLAWWLP 107
Query: 114 -NRDLLTA-------PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILK 165
+++ T+ +L+ + +L Q +YSDV FL+LGFI+E+I+++ LD +
Sbjct: 108 LYQEINTSLPRDKRREQLQGMLQNLKIEKQDTAVYSDVGFLVLGFIIEKIYDKSLDDVWT 167
Query: 166 DQVWKPWGMTETKFGPVELAV------------PTVRGVEAGIVHDPKARLLGRHAGSAG 213
D K + T +F P A P R + G VHD A LG + AG
Sbjct: 168 DIKNKFYLGTTLEFHPDNKAAHKASLYAPTEECPVRRKLVQGEVHDLNAWALGGVSTHAG 227
Query: 214 LFSTIKD---LQIFLEHYLADDFARDLNQNFSPLDDKERSLAWNLEGDW----------- 259
LF +I D + L +L + Q + L K R+L +GDW
Sbjct: 228 LFGSIDDAGWFSLHLRSHLMGIARYSIRQKTAQLFAK-RALPEG-KGDWAMGYMMPTPGS 285
Query: 260 -----------LDHTGYTGTFIMWNRQKQEATIFLSNRT-YEKDERA 294
+ HTG+TGT + ++ + + I LSNR Y D +A
Sbjct: 286 ASCGTYFSLDSIGHTGFTGTSVWYDPKMDLSVIILSNRVLYGSDNKA 332
>gi|145622548|ref|ZP_01778506.1| beta-lactamase [Petrotoga mobilis SJ95]
gi|144947073|gb|EDJ82107.1| beta-lactamase [Petrotoga mobilis SJ95]
Length = 336
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 92/336 (27%), Positives = 162/336 (48%), Gaps = 33/336 (9%)
Query: 5 KIIKKIEEQIEAGI---YPGASFAYFKDNQ-WTEFYLGQSDPEHGLQTEAGLVYDLASVS 60
K I+ + E + +G+ Y GAS K + + G D + L E ++DLASV+
Sbjct: 4 KDIESLNEIVSSGVNNVYTGASILIGKKEKILYKNTFGTKDEKERLTEED--IFDLASVT 61
Query: 61 KVVGVGTVCTFLWEIGQLDIDRLVIDFLP-ESDYPDITIRQLLTHATDLDPFIPNRDLLT 119
KVVG T L + Q+ ++ + F+ S +ITI +LLTH + + + +
Sbjct: 62 KVVGTATAVMRLIDENQIKLEDKIGKFIEVSSPKSEITIFELLTHTSGMQAYSNLWEEYR 121
Query: 120 APELKEAMFHLNRRSQP--AFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTET 177
EL + + ++ + P + YS ++F+ L I+E + ++ + + ++K GM T
Sbjct: 122 GEELLKHIINIQPQENPYKCYEYSCLNFITLMKIVEEVTQKNYQEYV-EGIFKKIGMENT 180
Query: 178 KFGP--VELAVPT-VRGVE--AGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADD 232
F P + AV T +R + G+V D A LG +G+AGLFS DL+IF+ L +
Sbjct: 181 CFNPKNQDKAVSTSIREGKRLKGVVEDELAYYLGGVSGNAGLFSNASDLRIFIISLLNGE 240
Query: 233 F-ARDLNQNFSPL----DDKERSLAW----------NLEGDWLDHTGYTGTFIMWNRQKQ 277
++D F+ + +AW +L+ H G+TGT I W R+
Sbjct: 241 IVSKDTLDLFTTTVVKRGENATHIAWMAPPVAGCQYSLDSTGFGHNGFTGTSI-WIRKDG 299
Query: 278 EATIFLSNRTYEKD--ERAQWILDRNQVMNLIRKEE 311
+IFL+N Y ++ + + RN++ N+I +++
Sbjct: 300 LFSIFLTNSVYYDRFLKKPELNVIRNKINNIIFRKD 335
>gi|16765798|ref|NP_461413.1| hypothetical protein STM2478 [Salmonella typhimurium LT2]
gi|23822362|sp|Q8ZN80|YFEW_SALTY UPF0214 protein yfeW precursor
gi|16421019|gb|AAL21372.1| putative beta-lactamase class C [Salmonella typhimurium LT2]
Length = 432
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 88/353 (24%), Positives = 144/353 (40%), Gaps = 76/353 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ--------WTEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I+ QI+AG YP + KDN + + Y G + H ++ +YDLAS +K
Sbjct: 47 IQNQIDAG-YPSINLLVIKDNHIVLQKAWGYAKKYDGSTLLAHPIRATTNTMYDLASNTK 105
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G++D++ LV ++P D P I+ +L H DP
Sbjct: 106 MYATNFALQKLVYEGKIDVNDLVSKYIPGFKDMPGDKIKGKNKLRIIDILHHVAGFPADP 165
Query: 111 FIPNRDLLTA--PELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+++ + K + +++ QP +YSDV +++LGFI+E I LD
Sbjct: 166 QYPNKNVAGKLFSQSKSTTLEMIKKTPLEYQPGSKHIYSDVDYMILGFIIESITAMPLDR 225
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
++ ++KP G+ T F P+ ++A + G G++H P R
Sbjct: 226 YVETTIYKPLGLKHTVFNPLMKGFTPPQIAATELHGNTRDGVIHFPNIRTNTLWGQVHDE 285
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYLA----------DDFARDLNQNFSPLDDKER 249
+G +G AGLFS D+ + ++ L DD SP +D
Sbjct: 286 KAWYSMGGVSGHAGLFSDTHDMAVLMQVMLNGGGYGNVKLFDDKTVAQFTRRSP-EDATF 344
Query: 250 SLAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + A + L NR +
Sbjct: 345 GLGWRVNGNASMTPTFGVLASPQTYGHTGWTGTLTSIDPVNHMAIVILGNRPH 397
>gi|56412639|ref|YP_149714.1| hypothetical protein SPA0391 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|56126896|gb|AAV76402.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
Length = 432
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 88/353 (24%), Positives = 144/353 (40%), Gaps = 76/353 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ--------WTEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I+ QI+AG YP + KDN + + Y G + H ++ +YDLAS +K
Sbjct: 47 IQNQIDAG-YPSINLLVIKDNHIVLQKAWGYAKKYDGSTLLAHPIRATTNTMYDLASNTK 105
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G++D++ LV ++P D P I+ +L H DP
Sbjct: 106 MYATNFALQKLVYEGKIDVNDLVSKYIPGVKDMPGDKIKGKDKLRIIDILHHVAGFPADP 165
Query: 111 FIPNRDLLTA--PELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+++ + K + +++ QP +YSDV +++LGFI+E I LD
Sbjct: 166 QYPNKNVAGKLFSQSKSTTLEMIKKTPLEYQPGSKHIYSDVDYMILGFIIESITAMPLDR 225
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
++ ++KP G+ T F P+ ++A + G G++H P R
Sbjct: 226 YVETTIYKPLGLKHTVFNPLMKGFTPPQIAATELHGNTRDGVIHFPNIRTNTLWGQVHDE 285
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYLA----------DDFARDLNQNFSPLDDKER 249
+G +G AGLFS D+ + ++ L DD SP +D
Sbjct: 286 KAWYSMGGVSGHAGLFSDTHDMAVLMQVMLNGGGYGNVKLFDDKTVAQFTRRSP-EDATF 344
Query: 250 SLAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + A + L NR +
Sbjct: 345 GLGWRVNGNASMTPTFGVLASPQTYGHTGWTGTLTSIDPVNHMAIVILGNRPH 397
>gi|116493209|ref|YP_804944.1| Beta-lactamase class C related penicillin binding protein
[Pediococcus pentosaceus ATCC 25745]
gi|116103359|gb|ABJ68502.1| Beta-lactamase class C related penicillin binding protein
[Pediococcus pentosaceus ATCC 25745]
Length = 325
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 11/230 (4%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLG-QSDPEHGLQTEAGLVYDLASVSKVVGVGTV 68
I+++IE GAS++ + Y G Q + + + ++YDL+++++VV T
Sbjct: 12 IKKEIENHNIYGASYSLITPKEIENRYEGVQGEGPSAVLLDPSMIYDLSTMTEVVATTTR 71
Query: 69 CTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAMF 128
L I ++ + V +LP DITI LLTH + L + T E A++
Sbjct: 72 IFQLLAIREIGLKDPVTKYLPGFSNRDITILHLLTHTSGLPVTVNKSKHFTGIEFTNALY 131
Query: 129 HLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG---PVE 183
+ +P S ++F++LG I+ R + +D ++D++ P MT T F P
Sbjct: 132 SVGLDFKPGEKMQVSPLNFVVLGIII-RTVDGSIDRAVQDRILYPLAMTNTGFNLNRPKA 190
Query: 184 LAVPT----VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL 229
VPT RG G V D LL +G GLFST+ DL +F+E L
Sbjct: 191 RFVPTRKDAKRGQIQGQVEDQLGLLLNGESGYTGLFSTLNDLTVFVEMML 240
>gi|62181044|ref|YP_217461.1| hypothetical protein SC2474 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62128677|gb|AAX66380.1| putative beta-lactamase class C [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 432
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 88/353 (24%), Positives = 144/353 (40%), Gaps = 76/353 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ--------WTEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I+ QI+AG YP + KDN + + Y G + H ++ +YDLAS +K
Sbjct: 47 IQNQIDAG-YPSINLLVIKDNHIVLQKAWGYAKKYDGSTLLAHPIRATTNTMYDLASNTK 105
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G++D++ LV ++P D P I+ +L H DP
Sbjct: 106 MYATNFALQKLVYEGKIDVNDLVSKYIPGFKDMPGDKIKGKDKLRIIDILHHVAGFPADP 165
Query: 111 FIPNRDLLTA--PELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+++ + K + +++ QP +YSDV +++LGFI+E I LD
Sbjct: 166 QYPNKNVAGKLFSQSKSTTLEMIKKTPLEYQPGSKHIYSDVDYMILGFIIESITAMPLDR 225
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
++ ++KP G+ T F P+ ++A + G G++H P R
Sbjct: 226 YVETTIYKPLGLKHTVFNPLMKGFTPPQIAATELHGNTRDGVIHFPNIRTNTLWGQVHDE 285
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYLA----------DDFARDLNQNFSPLDDKER 249
+G +G AGLFS D+ + ++ L DD SP +D
Sbjct: 286 KAWYSMGGVSGHAGLFSDTHDMAVLMQVMLNGGGYGNVKLFDDKTVAQFTRRSP-EDATF 344
Query: 250 SLAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + A + L NR +
Sbjct: 345 GLGWRVNGNASMTPTFGVLASPQTYGHTGWTGTLTSIDPVNHMAIVILGNRPH 397
>gi|29827802|ref|NP_822436.1| beta-lactamase [Streptomyces avermitilis MA-4680]
gi|29604903|dbj|BAC68971.1| putative beta-lactamase [Streptomyces avermitilis MA-4680]
Length = 615
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 82/283 (28%), Positives = 121/283 (42%), Gaps = 54/283 (19%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
V+DLASVSK+ + E G L+++ V +LP+ + D+TIRQLLTH +
Sbjct: 140 VFDLASVSKLF-TSLLAVQQLERGALELEARVASYLPDFAGAGKQDVTIRQLLTHTSGFR 198
Query: 110 PFIPNRDLLTAPELKEAM---FHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVIL 164
++P L AP E + ++ S P +LYSD++ + L +LE I LD +L
Sbjct: 199 AWLP---LYKAPSRAEKLRLIWNEAPLSPPGTKYLYSDLNLISLQLVLEEITGHPLDALL 255
Query: 165 KDQVWKPWGMTETKFGPVELAVPTV--------------RGVEAGIVHDPKARLLGRHAG 210
+D++ P G+ T++ P P + RG+ G VHD A G AG
Sbjct: 256 RDEITAPLGLRSTRYNPPAAWKPRIAATEDARPPWSGLDRGLVWGEVHDENAFGFGGVAG 315
Query: 211 SAGLFSTIKDLQIFLEHYL---------------ADDFARDLNQNFSPLDDKERSLAWNL 255
AG+FS DL + L + D N F P D E L + L
Sbjct: 316 HAGVFSCAWDLAVLGRTLLNGGTYGHTRILAPESVELLFTDFNTAF-PGD--EHGLGFEL 372
Query: 256 EGDWL----------DHTGYTGTFIMWNRQKQEATIFLSNRTY 288
W HTG+TGT ++ + I L N +
Sbjct: 373 YQHWYMGAMATPRTAGHTGFTGTSLVLDPTTDSFLIVLGNSVH 415
>gi|21225825|ref|NP_631604.1| esterase [Streptomyces coelicolor A3(2)]
gi|11228458|emb|CAC16441.1| putative esterase [Streptomyces coelicolor A3(2)]
Length = 353
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 83/270 (30%), Positives = 122/270 (45%), Gaps = 35/270 (12%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
V+DLASV+K + G V L E G L +D V +LP+ D ++T+RQLL H + +
Sbjct: 51 VWDLASVTKPIA-GLVVMALVERGALGLDDTVGGYLPDYRGGDKAELTVRQLLAHTSGIP 109
Query: 110 PFIP-NRDLLTAPELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVILKD 166
+P RD T L EA+ L +QP YS F++LG I E + L+ +++
Sbjct: 110 GQVPLYRDHPTRAALLEAVRLLPLTAQPGTRVQYSSQGFIVLGLIAEAAAGEPLEALVER 169
Query: 167 QVWKPWGMTETKFGP----VELAVPTV----RGVEA-GIVHDPKARLLGRHAGSAGLFST 217
V P G+ +T F P AV T RG G VHD A +LG G AGLFST
Sbjct: 170 LVCAPLGLRDTVFRPDAGRRARAVATEDCPWRGRRVVGEVHDENAVVLGGVGGHAGLFST 229
Query: 218 IKDLQIFLEHYLADDFARDLNQNFSPLDDK-------ERSLAWN------------LEGD 258
+ D++ A + F+ + R+LAW +
Sbjct: 230 LADMERLGAALAAGGRGLLRPETFALMTAAHTDGLALRRALAWQGRDPVGSPAGEVFGPE 289
Query: 259 WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
HTG+TGT + + + + L+NR +
Sbjct: 290 SYGHTGFTGTSLWVDPATRRYAVLLTNRVH 319
>gi|15893474|ref|NP_346823.1| Similar to beta-lactamase [Clostridium acetobutylicum ATCC 824]
gi|15023011|gb|AAK78163.1|AE007531_5 Similar to beta-lactamase [Clostridium acetobutylicum ATCC 824]
Length = 351
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 85/334 (25%), Positives = 141/334 (42%), Gaps = 39/334 (11%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWT--EFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGT 67
I+E + G++PGA A + E + + L ++DLAS++KVV T
Sbjct: 15 IKEGVSKGVFPGAVAAVGTRERVIRLESFGNRCLYPEKLSMNKDTLFDLASLTKVVATNT 74
Query: 68 VCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIPNRDLLTAPELK 124
+ E G + + V +L + + D+TI LLTH P P L E
Sbjct: 75 LFMIFLEKGLISVYDNVSYYLEKFKGKNKDDVTIFNLLTHTAGFVPCKPLYKLCKGYE-- 132
Query: 125 EAMFHLNR-----RSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF 179
+++ ++ R + +YSD ++LL +ILE+I LD++ ++KP M T F
Sbjct: 133 DSIDYICRCGLSYKPGTKCVYSDFSYILLAYILEKIGGDTLDILCDRYIFKPLYMENTTF 192
Query: 180 GP-------VELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLAD- 231
P E+ T + + G+ HD R G +G AGLFS I DL F + +
Sbjct: 193 KPKGNNIAATEIDKKTKKPL-IGVCHDENGRFFGGISGHAGLFSDIYDLCKFSNMLVNEG 251
Query: 232 ----DFA--RDLNQNFSPLDDKERSLAWNLEGD------------WLDHTGYTGTFIMWN 273
+A + + N + + R W ++GD H G+TGT + +
Sbjct: 252 KGIISYASFKAMTTNHTLGLEDNRGYGWCIKGDKNSFMGDIAFPETFGHNGFTGTSLWVD 311
Query: 274 RQKQEATIFLSNRTYEKDERAQWILDRNQVMNLI 307
+ I L+NR + + + I R N +
Sbjct: 312 IKNNIYAILLTNRVHPTRDNLRIIRFRRVFSNAV 345
>gi|16761395|ref|NP_457012.1| hypothetical protein STY2716 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29140908|ref|NP_804250.1| hypothetical protein t0381 [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
gi|23822361|sp|Q8Z4S7|YFEW_SALTI UPF0214 protein yfeW precursor
gi|25511870|pir||AB0816 probable exported protein STY2716 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503694|emb|CAD07708.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136533|gb|AAO68099.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
Length = 432
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 88/353 (24%), Positives = 144/353 (40%), Gaps = 76/353 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ--------WTEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
I+ QI+AG YP + KDN + + Y G + H ++ +YDLAS +K
Sbjct: 47 IQNQIDAG-YPSINLLVIKDNHIVLQKAWGYAKKYDGSTLLAHPIRATTNTMYDLASNTK 105
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITIR--------QLLTHATDL--DP 110
+ L G++D++ LV ++P D P I+ +L H DP
Sbjct: 106 MYATNFALQKLVYEGKIDVNDLVSKYIPGFKDMPGDKIKGKDKLRIIDILHHVAGFPADP 165
Query: 111 FIPNRDLLTA--PELKEAMFHLNRRS----QPA--FLYSDVHFLLLGFILERIFNQDLDV 162
PN+++ + K + +++ QP +YSDV +++LGFI+E I LD
Sbjct: 166 QYPNKNVAGKLFSQSKSTTLEMIKKTPLEYQPGSKHIYSDVDYMILGFIIESITAMPLDR 225
Query: 163 ILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-VEAGIVHDPKARL---------- 204
++ ++KP G+ T F P+ ++A + G G++H P R
Sbjct: 226 YVETTIYKPLGLKHTVFNPLMKGFTPPQIAATELHGNTRDGVIHFPNIRTNTLWGQVHDE 285
Query: 205 -----LGRHAGSAGLFSTIKDLQIFLEHYLADD-------FARDLNQNF---SPLDDKER 249
+G +G AGLFS D+ + ++ L F F SP +D
Sbjct: 286 KAWYSMGGVSGHAGLFSDTHDMAVLMQVMLNGGGYGNVKLFDNKTVAQFTRRSP-EDATF 344
Query: 250 SLAWNLEGD--------------WLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L W + G+ HTG+TGT + A + L NR +
Sbjct: 345 GLGWRVNGNASMTPTFGVLASPQTYGHTGWTGTLTSIDPVNHMAIVILGNRPH 397
>gi|124515092|gb|EAY56603.1| Beta-lactamase class C protein [Leptospirillum sp. Group II UBA]
Length = 352
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 79/275 (28%), Positives = 127/275 (46%), Gaps = 42/275 (15%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESD---YPDITIRQLLTHATDLD 109
V+DLAS++K + ++ L G LDID + ++LP++ + +LL+H++ L
Sbjct: 53 VFDLASLTKPLVTASLSLLLASKGMLDIDAPLSEYLPDTRKTALEGVAFHRLLSHSSGLV 112
Query: 110 PFIPNRDLL--TAPE-----LKEAMFHLNRRSQPAFL--YSDVHFLLLGFILERIFNQDL 160
+ P L PE LK+ + L S P YSD ++L G+ILE + + L
Sbjct: 113 GWAP---LFRKCVPESARECLKKEILALPLSSVPGTRSEYSDFGYILAGWILESVGQKPL 169
Query: 161 DVILKDQVWKPWGMTETKFGPVELAVP----TVRGVEA---------GIVHDPKARLLGR 207
D + ++ + P G+++ F PV P + EA GIVHD ARLLG
Sbjct: 170 DCLFEEYIRIPLGISDAGFTPVAPGSPLEKRSFAATEAPEEGSAPLAGIVHDEHARLLGG 229
Query: 208 HAGSAGLFSTIKDLQIFLEHYL--ADDFARD-LNQNFSPLDDKERSLAWN---------- 254
+G AGLF T K + + + D F R L++ + D +L W+
Sbjct: 230 VSGHAGLFGTAKAVWELSKPWFGEGDLFPRGWLDRFRTRQDGSPWTLGWDTPTAGSSSGT 289
Query: 255 -LEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
+ H GYTGT + + +Q I L++R +
Sbjct: 290 RFSSFSIGHLGYTGTSVWMDLDRQIIIILLTHRVH 324
>gi|148656485|ref|YP_001276690.1| beta-lactamase [Roseiflexus sp. RS-1]
gi|148568595|gb|ABQ90740.1| beta-lactamase [Roseiflexus sp. RS-1]
Length = 357
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 79/313 (25%), Positives = 130/313 (41%), Gaps = 37/313 (11%)
Query: 14 IEAGIYPGASFAYFKDNQW---TEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCT 70
I+ I+PGA +D + + DP +YD+AS++K+ T
Sbjct: 14 IDGRIFPGAVVLVARDAEVLHVAAYGTMTYDPSGNNPVTPATIYDIASLTKMF-TATAAL 72
Query: 71 FLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAMFHL 130
L++ G++D+ V +LP D+T+ LLTH + LD + L A++
Sbjct: 73 HLYDKGKIDLAAPVQAYLPHVRARDVTVWHLLTHTSGLDLRLSTLRHAGRAGLLAAVYDA 132
Query: 131 --NRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELAVPT 188
R + Y++++ LLLG I+ ++ Q LD + + V +P + T F P +
Sbjct: 133 LPARPPGSSVAYTNINSLLLGEIITAVYGQPLDRAIDELVCRPLRLQRTGFRPDPALIAH 192
Query: 189 VRGVE----------AGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLN 238
+ E G+VHD A +LG AG AGLFST DL F +L
Sbjct: 193 IAPTEFDGEWRGCLVHGVVHDESAYVLGGIAGHAGLFSTAGDLWTFCRAWLPAGSDHQPT 252
Query: 239 QNFSP------LDDKERSLAWNLEGDWL---------------DHTGYTGTFIMWNRQKQ 277
+P + ++ LA W+ HTG+TG ++ + +
Sbjct: 253 PLLNPTTLTLAITNQTPGLAQACGLGWMIDRPNFMGPAPRGSYGHTGFTGPALVIVPRDR 312
Query: 278 EATIFLSNRTYEK 290
I LSNR + +
Sbjct: 313 LIIIVLSNRVHPQ 325
>gi|34539891|ref|NP_904370.1| glycosyl hydrolase, family 3 [Porphyromonas gingivalis W83]
gi|34396202|gb|AAQ65269.1| glycosyl hydrolase, family 3 [Porphyromonas gingivalis W83]
Length = 1003
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 88/372 (23%), Positives = 150/372 (40%), Gaps = 94/372 (25%)
Query: 11 EEQIEAGIYPGAS-FAYFKDNQWTEFYLGQSD-PEHGLQTEAGLVYDLASVSKVVGVGTV 68
+E + G +PG A +D + G D G + + +YDLASV+KVV
Sbjct: 602 KEALRQGAFPGCRILAVHRDKVVYDKSFGTLDGSARGGKVSSSTIYDLASVTKVVATTPA 661
Query: 69 CTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFI------------- 112
L + G+L + + LP +D DIT++QLL H L P I
Sbjct: 662 VMLLVQDGKLKLSDRLGTLLPRFARTDLKDITVQQLLLHEAGLRPSINFYESLIDSSSLD 721
Query: 113 -----PNR--------------------------------------DLLTAPELKEAMFH 129
P R +L + E+KE + +
Sbjct: 722 GKLLSPRRSSGWVRVDTNMWGNPFFGFRSDLVSGQFRPDYPFRFSSNLYLSKEVKEIVLN 781
Query: 130 L----NRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVE-L 184
R + YSD+ F+LL I+E++ + L+V +++++++P G + P++
Sbjct: 782 TIASTPRNGVGRYKYSDLGFILLQQIVEKVSGKSLNVFVEERIFRPIGAGSLGYLPLDKY 841
Query: 185 AVPTV----------RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDF- 233
+V + + + G V D A LG +G+AG+F T +D+ L+ ++ +
Sbjct: 842 SVSRIAPAQNDKFLRKSIVRGTVDDEAAACLGGISGNAGVFGTAEDVARVLDMFIHEGTY 901
Query: 234 --ARDLNQNFSPL---------------DDKERSLAWNLEGDWLDHTGYTGTFIMWNRQK 276
R ++Q L D S+A + G HTG+TGT + + +
Sbjct: 902 KGHRIIDQKIFRLFITTHGKGNRRCLGFDKGRASMAESASGSTYGHTGFTGTCVWVDPEN 961
Query: 277 QEATIFLSNRTY 288
+ +FLSNRTY
Sbjct: 962 ELIFVFLSNRTY 973
>gi|120406837|ref|YP_956666.1| beta-lactamase [Mycobacterium vanbaalenii PYR-1]
gi|119959655|gb|ABM16660.1| beta-lactamase [Mycobacterium vanbaalenii PYR-1]
Length = 496
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/242 (28%), Positives = 108/242 (44%), Gaps = 69/242 (28%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESD------YPDITIRQLLTHAT 106
++DLAS+SK + L+E G + ID V +LPE + +T+R LLTH +
Sbjct: 118 IFDLASLSKSLATAPAFLQLYERGLVRIDEPVQTYLPEFNPAGDPRRAQVTLRMLLTHTS 177
Query: 107 DL--DPFIPNRDLLTAPELKEAMFHLNRRSQPA---------FLYSDVHFLLLGFILERI 155
L D + L P+ + + RR+ A F YSD++F+L+G I+E++
Sbjct: 178 GLAGDLSLDGPWGLDKPDKADGI----RRALAAWVVFDPGEIFHYSDINFILVGAIIEKL 233
Query: 156 FNQDLDVILKDQVWKPWGMTETKF-------GPVEL------------------------ 184
+ LD ++D+V+ P GMT+T++ GP E+
Sbjct: 234 TGEQLDSYVRDRVFAPLGMTDTRYLPAAKTCGPHEIRGTTVALGHYPPWIGQCPAGTWST 293
Query: 185 -----AVPTVRGVEA------------GIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEH 227
PT R + G VHDP AR +G GSAG+FST+ D+ F +
Sbjct: 294 ALLPRIAPTARDGDTPGLNPDYGHLLRGTVHDPTARRMGGVTGSAGVFSTVGDVGRFAQA 353
Query: 228 YL 229
L
Sbjct: 354 LL 355
>gi|149372824|ref|ZP_01891845.1| b-glycosidase, glycoside hydrolase family 3 protein [unidentified
eubacterium SCB49]
gi|149354521|gb|EDM43086.1| b-glycosidase, glycoside hydrolase family 3 protein [unidentified
eubacterium SCB49]
Length = 975
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 77/308 (25%), Positives = 131/308 (42%), Gaps = 74/308 (24%)
Query: 54 YDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDP 110
YD+AS++K++ + L++ G L +D + D LPE +D +IT++Q+LTH L
Sbjct: 640 YDVASLTKILATLPIIMDLYDRGILTMDTKLKDMLPEYKGTDKANITLQQMLTHTARLKA 699
Query: 111 FIP---------------------NRDLLTAP---------ELKEAMFHL----NRRSQP 136
+IP D T P E ++++F + R
Sbjct: 700 WIPFYTKTLDSVTKKPSSKWYSKNKEDDFTIPVAKNLFMKREYRDSIFQRIKESDLRVNK 759
Query: 137 AFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVEL-----AVPTV-- 189
+ YSD+ + LL +E + L+V+++ +++ G T + P++ +PT
Sbjct: 760 GYKYSDLPYYLLMKYVEEFYGTPLEVLVQRNLYESLGANNTTYLPLDKFSKSNIIPTEND 819
Query: 190 ----RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPL- 244
+ V G VHD A +LG G AGLFS D+ ++ YL D Q F P
Sbjct: 820 QIYRQQVVHGYVHDQGAAMLGGVGGHAGLFSNTNDVAKIMQMYLWKGTYGD-KQYFKPET 878
Query: 245 -----------DDKERSLAWN-------------LEGDWLDHTGYTGTFIMWNRQKQEAT 280
D+ R + ++ + + H+G+TGTF + +
Sbjct: 879 IDAFNTCYFCEDNVRRGVGFDKPQLGDVGPTCGCVSLNSFGHSGFTGTFTWADPDQDIVY 938
Query: 281 IFLSNRTY 288
+F+SNRTY
Sbjct: 939 VFMSNRTY 946
>gi|51891773|ref|YP_074464.1| putative beta-lactamase [Symbiobacterium thermophilum IAM 14863]
gi|51855462|dbj|BAD39620.1| putative beta-lactamase [Symbiobacterium thermophilum IAM 14863]
Length = 378
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 89/333 (26%), Positives = 137/333 (41%), Gaps = 61/333 (18%)
Query: 7 IKKIEEQIEAGIYPGASFAYFKDNQ--------WTEFYLGQSDPEHGLQTEAGLVYDLAS 58
I+ +E++I A PGA +D W Y P T G ++DLAS
Sbjct: 33 IRLLEQEIAAERLPGAVVVIARDGAVAAHRALGWAAVY-----PRRRPMT-PGTLFDLAS 86
Query: 59 VSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIPNR 115
++KV+ L E+G++ +D + F PE +I IR LLTH + L P
Sbjct: 87 LTKVMATLPAVLRLMEMGEIRLDDPLHLFFPEYQGDGRQEIRIRHLLTHTSGL----PAG 142
Query: 116 DL-LTAPELKE-------AMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQ 167
L L P + A L +YSD+ F+LLG ++ R+ + L+ +++Q
Sbjct: 143 SLSLREPAASQEERIARIAQVPLEAPPGSRIIYSDLGFILLGELVARLSARPLERFVREQ 202
Query: 168 VWKPWGMTETKFGPVELAVPTVRGVE---------AGIVHDPKARLLGRHAGSAGLFSTI 218
V P G+ ET + P + E G VHD A LG +G AGLF T
Sbjct: 203 VHGPLGLEETGYLPEGERAASAAATEFREHLGRYQCGEVHDQTATALGGVSGHAGLFGTA 262
Query: 219 KDLQIFLEHYL---------ADDFARDLNQNFSPLDDKERSLAWNLE---------GDWL 260
++ + + +L A A +Q D+ R L W + GD
Sbjct: 263 PEVAAYGQMWLDGGSGVLSPASVAAATRDQTPHIAGDEHRGLGWIVVHEGAAFLSCGDLF 322
Query: 261 D-----HTGYTGTFIMWNRQKQEATIFLSNRTY 288
HTG+TGT + + ++ L+NR +
Sbjct: 323 SVGSFGHTGFTGTSLWVDPHRRLVVALLTNRVH 355
>gi|126353991|ref|ZP_01711002.1| beta-lactamase [Caldivirga maquilingensis IC-167]
gi|126312645|gb|EAZ65099.1| beta-lactamase [Caldivirga maquilingensis IC-167]
Length = 361
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 83/344 (24%), Positives = 151/344 (43%), Gaps = 57/344 (16%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQ-WTEFYLG--QSDPEHGLQTEAGLVYDLA 57
M+ +++I E + YPGAS + + +G Q P L G+++DLA
Sbjct: 1 MECVNTVRRIMEGLVKDAYPGASLVVNANGETLINLTVGYAQLKPVERLM-RGGMLFDLA 59
Query: 58 SVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE--------SDYPD-ITIRQLLTHATDL 108
S++K + + L E G L + + V + +P+ SD D + + LL+H + L
Sbjct: 60 SLTKALSTSLIVMKLAEEGALSLSQRVSELIPDFSRTNAGASDVKDKVRVWMLLSHTSGL 119
Query: 109 DPFIP------NRDLLTAPELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDL 160
++P +RD L + + + +P +YSD+++++L ++ERI Q +
Sbjct: 120 PAWLPLYKSASSRDELINQAVTSFLVY-----EPGSRVVYSDLNYIVLTALVERITGQRI 174
Query: 161 DVILKDQVWKPWGMTETKFGPVE-------LAVPTVRG-VEAGIVHDPKARLLGRHAGSA 212
D + ++ V KP +++ + P+ +A + G G+VHD AR + +G A
Sbjct: 175 DSLFQEMVAKPLNLSKALYNPLTRFSRDDVVATEYINGDALVGVVHDENARAMDGVSGHA 234
Query: 213 GLFSTIKD----LQIFLEHYLADDFAR--DLNQNFSPLDDKER--SLAWNL--------- 255
GLF+T +D LE Y F + ++P E L W +
Sbjct: 235 GLFATAEDAAKIADSLLESYRNGAFLTRPSIKTMWTPWACGESCYGLGWQIYKRGVTTSG 294
Query: 256 -----EGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTY-EKDER 293
+G HTG+TGT + + + + +NR + +D R
Sbjct: 295 GDFLTDGKAFGHTGFTGTSLWIDVELGLTIVLFTNRVHPSRDNR 338
>gi|118717995|ref|ZP_01570529.1| Uncharacterised conserved protein UCP016719 [Burkholderia
multivorans ATCC 17616]
gi|118658458|gb|EAV65204.1| Uncharacterised conserved protein UCP016719 [Burkholderia
multivorans ATCC 17616]
Length = 785
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 90/310 (29%), Positives = 129/310 (41%), Gaps = 48/310 (15%)
Query: 43 EHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIR 99
EH V+DLAS++K V L E G L +D + P ITIR
Sbjct: 79 EHVEAMTVDTVFDLASLTKPVATAVAIMQLAERGMLSLDAPAARYWPAFGAHGKAGITIR 138
Query: 100 QLLTHATDLDPFIPNRDLLTAPELKEAMFHLNRRSQPAFL------YSDVHFLLLGFILE 153
QLL H + L + + L + + A+ P L YSDV++++LG I+E
Sbjct: 139 QLLAHVSGLPAGVSSSRALRS---RAAVLADIVAMTPGALAGTQVRYSDVNYVVLGKIVE 195
Query: 154 RIFNQDLDVILKDQVWKPWGMTETKFGP-----VELAVPTVRG--VEAGIVHDPKARLLG 206
R+ ++ LD V+ P GM T F P +A T R + G VHDP A +G
Sbjct: 196 RVSHRPLDAWCAAHVFAPLGMASTAFRPPASLFARVAPTTARDGHLLRGSVHDPVAAAMG 255
Query: 207 RHAGSAGLFSTIKDLQIFLEHYL---ADDFARDLNQNFSPLDDKERSLAWNLEGD----- 258
AG+AGLF++ DL F L A R L + + E + EGD
Sbjct: 256 GVAGNAGLFASADDLARFARMLLNGGALGPVRVLARR--SVAALETPATLDAEGDLHTPG 313
Query: 259 W------------------LDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDR 300
W L H GYTGT + + + I L++R Y DE + R
Sbjct: 314 WAVGPPLVANRYRLPPVGALQHLGYTGTALWIDPVTRRFAIVLTSRLY-PDETGTAMPLR 372
Query: 301 NQVMNLIRKE 310
+ V+ ++ E
Sbjct: 373 SLVLGIVSSE 382
>gi|53711716|ref|YP_097708.1| putative esterase [Bacteroides fragilis YCH46]
gi|52214581|dbj|BAD47174.1| putative esterase [Bacteroides fragilis YCH46]
Length = 627
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 85/308 (27%), Positives = 131/308 (42%), Gaps = 63/308 (20%)
Query: 49 EAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE--------SDYPDITIRQ 100
E V+D+AS SK + L E GQL + V +LP+ + DI I
Sbjct: 102 EINTVFDMASCSKSMSTAVSVMILVERGQLRLLDRVSFYLPDFQEWRGENGEKKDIRIID 161
Query: 101 LLTHATDLDPFIPNRDL---LTAPELKEAMFHLNR-----RSQPAFLYSDVHFLLLGFIL 152
L+TH + L P+ P +L +P K M +++ + Q F YS ++++ L I+
Sbjct: 162 LMTHTSGLPPYAPVSELQEKYGSPNPKGLMEYISTCKREFKPQTKFQYSCLNYITLQHII 221
Query: 153 ERIFNQDLDVILKDQVWKPWGMTETKFGP-----------------VELAVPTVR----G 191
E I Q L K+ ++ GM T + P ++ PT +
Sbjct: 222 ETITGQSLRDFAKENIFDILGMQYTDYLPTIQQQDGKWINTVACPWMDRIAPTEKQKDGS 281
Query: 192 VEAGIVHDPKARLL-GRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLDDKE-- 248
V G VHDP AR+L G +G+AG+FS D+ I L L + + ++ SPL K
Sbjct: 282 VLCGQVHDPLARILNGGISGNAGIFSNANDIGI-LAAALLNGGEYNGHRILSPLGVKTMC 340
Query: 249 ----------RSLAWNL-------EGDWLD-----HTGYTGTFIMWNRQKQEATIFLSNR 286
R+ W++ +GD HTGYTGT I+ + A I L N
Sbjct: 341 TVPRELTAFGRTPGWDIFSPYASNKGDLFSPNTFGHTGYTGTSIIIDPDNDTAVILLVNA 400
Query: 287 TYEKDERA 294
+ +D +
Sbjct: 401 VHPEDRHS 408
>gi|60679954|ref|YP_210098.1| putative beta-lactamase/acylhydrolase [Bacteroides fragilis NCTC
9343]
gi|60491388|emb|CAH06136.1| putative beta-lactamase/acylhydrolase [Bacteroides fragilis NCTC
9343]
Length = 627
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 85/308 (27%), Positives = 131/308 (42%), Gaps = 63/308 (20%)
Query: 49 EAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE--------SDYPDITIRQ 100
E V+D+AS SK + L E GQL + V +LP+ + DI I
Sbjct: 102 EINTVFDMASCSKSMSTAVSVMILVERGQLRLLDRVSFYLPDFQEWRGENGEKKDIRIID 161
Query: 101 LLTHATDLDPFIPNRDL---LTAPELKEAMFHLNR-----RSQPAFLYSDVHFLLLGFIL 152
L+TH + L P+ P +L +P K M +++ + Q F YS ++++ L I+
Sbjct: 162 LMTHTSGLPPYAPVSELQEKYGSPNPKGLMEYISTCKREFKPQTKFQYSCLNYITLQHII 221
Query: 153 ERIFNQDLDVILKDQVWKPWGMTETKFGP-----------------VELAVPTVR----G 191
E I Q L K+ ++ GM T + P ++ PT +
Sbjct: 222 ETITGQSLRDFAKENIFDILGMQYTDYLPTIQQQDGKWINTVACPWMDRIAPTEKQKDGS 281
Query: 192 VEAGIVHDPKARLL-GRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLDDKE-- 248
V G VHDP AR+L G +G+AG+FS D+ I L L + + ++ SPL K
Sbjct: 282 VLCGQVHDPLARILNGGISGNAGIFSNANDIGI-LAAALLNGGEYNGHRILSPLGVKTMC 340
Query: 249 ----------RSLAWNL-------EGDWLD-----HTGYTGTFIMWNRQKQEATIFLSNR 286
R+ W++ +GD HTGYTGT I+ + A I L N
Sbjct: 341 TVPRELTAFGRTPGWDIFSPYASNKGDLFSPNTFGHTGYTGTSIIIDPDNDTAVILLVNA 400
Query: 287 TYEKDERA 294
+ +D +
Sbjct: 401 VHPEDRHS 408
>gi|70996903|ref|XP_753206.1| beta-lactamase, putative [Aspergillus fumigatus Af293]
gi|66850842|gb|EAL91168.1| beta-lactamase, putative [Aspergillus fumigatus Af293]
Length = 438
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 87/333 (26%), Positives = 134/333 (40%), Gaps = 77/333 (23%)
Query: 18 IYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEI-- 75
++ + + D TE GQ L +YDLAS++K+ T L EI
Sbjct: 88 LFASGNMLLYADANGTELPRGQQ-----LSARPDTIYDLASLTKLF---TTIAALREIDT 139
Query: 76 GQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDL---------DPFIPNRDLLTAPEL 123
G+L +D+ V ++P + +ITI LLTH + DP + TA L
Sbjct: 140 GRLALDQTVASYMPSFAANGKENITILMLLTHTSGFAPDPEPPLYDPVYTTVEQRTAAIL 199
Query: 124 KEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF---- 179
+++ H +LYSD++F+ LG +LE I ++ LD ++++ P GM +T F
Sbjct: 200 NQSLLH---APGSTYLYSDLNFMSLGLLLEHITHKALDELIREYT-DPLGMHDTFFNRGN 255
Query: 180 --GPVELAVPTVRGVE-----------------AGIVHDPKARLLGRHAGSAGLFSTIKD 220
GP P + E G VHD A L AG AGLFST++D
Sbjct: 256 IEGPAFPFYPRMAAEEYQIEVLGSMEPVRPQPVRGTVHDENAWALDGVAGHAGLFSTVED 315
Query: 221 LQIFLEHYL---------------ADDFARDLNQNFSPLDDKERSLAWNLEGDWL----- 260
I + L D + N+ F E L + L +
Sbjct: 316 TAILCQMILNNGTYGGRRILSPEVVDLIFHNFNERFP---GNEHGLGFELNQYYTAGPMA 372
Query: 261 -----DHTGYTGTFIMWNRQKQEATIFLSNRTY 288
HTG+TGT ++ +R + +NR +
Sbjct: 373 SLQTASHTGFTGTTMVIDRPSNTFFLLFANRVH 405
>gi|83857332|ref|ZP_00950860.1| putative hydrolase/beta lactamase fusion protein [Croceibacter
atlanticus HTCC2559]
gi|83848699|gb|EAP86568.1| putative hydrolase/beta lactamase fusion protein [Croceibacter
atlanticus HTCC2559]
Length = 971
Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 81/310 (26%), Positives = 132/310 (42%), Gaps = 76/310 (24%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
+YD+AS++K++ + L E ++++ + D LP+ S+ +ITI+Q+L+H L
Sbjct: 637 LYDVASLTKILATLPLVMELEENNTINLNTKLKDILPQLSKSNKKNITIKQMLSHYAKLP 696
Query: 110 PFIP----NRDLLTAP----------------ELKEAMFHLNR--------------RSQ 135
+IP D +T ++ E + N RS+
Sbjct: 697 AWIPFYLHTMDTVTKRASVKYYRDKSDSNFNIQVAENFYIRNDYNDSIYKEIADSELRSR 756
Query: 136 PAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPV-----ELAVPTV- 189
A+ YSD+ + +L LE + L I +D ++P G T + P+ E VPT
Sbjct: 757 LAYKYSDIPYYILKQYLEDYYGNSLHTITQDHFYEPLGANFTTYIPLNSFSKEQIVPTEN 816
Query: 190 -----RGVEAGIVHDPKARLLGRHAGSAGLFSTIKD----LQIFL-------EHYLADDF 233
R V G VHD A +LG G AGLFS D +Q++L + +L ++
Sbjct: 817 DTLWRRQVVQGYVHDQGAAMLGGIGGHAGLFSNANDIAKIMQMYLNGGYYGGQRFLKEET 876
Query: 234 ARDLNQNFSPLDDKERSLAWNLEGDWLD---------------HTGYTGTFIMWNRQKQE 278
+ N+ + DK+ + LD H+G+TGT+ +
Sbjct: 877 IQKFNKTY--YKDKKVRRGVGFDKPQLDEVGPTCGCVPMSSFGHSGFTGTYTWADPDNNL 934
Query: 279 ATIFLSNRTY 288
IFLSNRTY
Sbjct: 935 IYIFLSNRTY 944
>gi|134291689|ref|YP_001115458.1| Uncharacterised conserved protein UCP016719 [Burkholderia
vietnamiensis G4]
gi|134134878|gb|ABO59203.1| Uncharacterised conserved protein UCP016719 [Burkholderia
vietnamiensis G4]
Length = 798
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 84/284 (29%), Positives = 124/284 (43%), Gaps = 40/284 (14%)
Query: 45 GLQTE---AGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITI 98
G Q E A V+DLAS++K + L E G L +D + P ++ ITI
Sbjct: 91 GEQAEPMTADTVFDLASLTKPLATAVAIMQLAERGMLGLDMPAAHYWPAFGTNEKAGITI 150
Query: 99 RQLLTHATDLDPFIPN-RDLLTAPELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERI 155
RQLL H + L + + R L + + + + + P YSDV++++LG I+ R+
Sbjct: 151 RQLLAHVSGLPAGVSSARALRSRAAVLADIVAMAPVATPGTRVRYSDVNYVVLGEIVRRV 210
Query: 156 FNQDLDVILKDQVWKPWGMTETKFGP-----VELAVPTVRG--VEAGIVHDPKARLLGRH 208
++ LD + V+ P GMT F P +A VR + G VHDP A LG
Sbjct: 211 SHRPLDAWCAEHVFGPLGMTSATFRPAAPLSARVAPTVVRDGRLLRGRVHDPVAAALGGV 270
Query: 209 AGSAGLFSTIKDLQIFLEHYLADDF--------ARDLNQNFSPLD-DKERSL---AWNLE 256
AG+AGLF++ DL F L AR + + +PL D L W +
Sbjct: 271 AGNAGLFASADDLARFARMLLNGGTLGATRVLSARSVAELETPLPADTPSELHTPGWAVG 330
Query: 257 GDW------------LDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
L H GYTGT + + + I L++R Y
Sbjct: 331 PPLVANRYRLPPVGALQHLGYTGTALWIDPVTRRFAIVLTSRLY 374
>gi|118696065|ref|ZP_01554147.1| Uncharacterised conserved protein UCP016719 [Burkholderia ambifaria
MC40-6]
gi|118646055|gb|EAV52886.1| Uncharacterised conserved protein UCP016719 [Burkholderia ambifaria
MC40-6]
Length = 792
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/196 (32%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 43 EHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIR 99
E G A V+DLAS++K V L E G L +D + P ITIR
Sbjct: 86 ERGEPMTADTVFDLASLTKPVATAVAIMQLAERGMLSVDAPAARYWPAFGVRGKSGITIR 145
Query: 100 QLLTHATDLDPFIPN-RDLLTAPELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIF 156
QLL H + L + + R L + + + + + YSDV++++LG I+ER+
Sbjct: 146 QLLAHVSGLPAGVSSSRALRSRAAVLADIVAMTPDASAGSRVRYSDVNYVVLGEIVERVS 205
Query: 157 NQDLDVILKDQVWKPWGMTETKFGP----VELAVPTV----RGVEAGIVHDPKARLLGRH 208
++ LD V+ P GM T F P + PT+ R + G VHDP A +G
Sbjct: 206 HRPLDAWCAAHVFAPLGMASTAFRPPAPLLARVAPTIIRDGRPLRGG-VHDPVAAAMGGV 264
Query: 209 AGSAGLFSTIKDLQIF 224
AG+AGLF++ DL F
Sbjct: 265 AGNAGLFASADDLARF 280
>gi|116747994|ref|YP_844681.1| beta-lactamase [Syntrophobacter fumaroxidans MPOB]
gi|116697058|gb|ABK16246.1| beta-lactamase [Syntrophobacter fumaroxidans MPOB]
Length = 375
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 92/352 (26%), Positives = 142/352 (40%), Gaps = 77/352 (21%)
Query: 5 KIIKKIEEQIEAGIYPGASF------AYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLAS 58
+I + E+ + GI+ GAS + QW G S + TE +DLAS
Sbjct: 4 QIEQLFEDGLREGIFSGASLLAAARGTILFERQWGHTLSGGSP----ISTETR--FDLAS 57
Query: 59 VSKVVGVGTVCTFLWEIGQLDIDR-----LVIDFLPESDYPDITIRQLLTHATDLDPFIP 113
++K++ + G L +D D LP +D DI+IR LL H + L + P
Sbjct: 58 LTKILVTTPLAVCAASRGALRLDHTLDAFFAPDVLP-ADKRDISIRHLLNHCSGLPAYHP 116
Query: 114 -NRDLLT------APELKEAMFHLNRRSQPAFL--YSDVHFLLLGFILERIFNQDLDVIL 164
RDL++ P L +A+ + P + YSD+ FLLLG ILE++F+ LD +
Sbjct: 117 FYRDLISLPPPSRRPALLDAILRTPLAAPPGTVACYSDLGFLLLGMILEKLFDGRLDQVA 176
Query: 165 KDQVWKPWGMTETKFGPVELA-----VPTVRGVEA-----------------GIVHDPKA 202
+ V+ P+ + F +E+ +P++ + G VHD
Sbjct: 177 RKMVFDPFRIDSLHFRSMEVPTGPEIIPSLSPADGLSFAATEHCPWRKRLLVGEVHDENC 236
Query: 203 RLLGRHAGSAGLFSTIKDLQIFLEHYLADDFAR----------DLNQNFSPLDDKERSLA 252
LG AG AGLF T + + L +L D AR D+ F
Sbjct: 237 YCLGGVAGHAGLFGTARGIFTLLSRFL--DIARGDSGEPAWSSDILTEFWSRQGIVADST 294
Query: 253 WNLEGDW----------------LDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
W L D + H G++GT + ++ I L+NR Y
Sbjct: 295 WALGFDTPSASNSSAGRFFSPRSVGHLGFSGTSAWMDLERSVIIILLTNRIY 346
>gi|119477051|ref|XP_001259228.1| beta-lactamase, putative [Neosartorya fischeri NRRL 181]
gi|119407382|gb|EAW17331.1| beta-lactamase, putative [Neosartorya fischeri NRRL 181]
Length = 437
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 80/303 (26%), Positives = 131/303 (43%), Gaps = 60/303 (19%)
Query: 42 PEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEI--GQLDIDRLVIDFLPE---SDYPDI 96
P L +YD+AS++K+ T L E G+L +D+ V ++P + +I
Sbjct: 107 PSQQLSARTDTIYDMASLTKLF---TTVAALRETDTGRLSLDKTVASYMPSFAANGKENI 163
Query: 97 TIRQLLTH----ATDLDPFIPNRDLLTAPELKEAMFHLNRRSQPA--FLYSDVHFLLLGF 150
T+ LLTH A D +P + N T A+ + + R+ P +LYSD++F+ LG
Sbjct: 164 TVLMLLTHTSGFAPDPEPPLYNPVYKTVKARTAAILNQSLRNAPGSTYLYSDLNFMSLGL 223
Query: 151 ILERIFNQDLDVILKDQVWKPWGMTETKF------GPV----------ELAVPTVRGVEA 194
+LE I ++ LD ++++ P GM +T F GP E + + +E
Sbjct: 224 LLEHITHKKLDELIREYT-NPLGMHDTFFNRGNIEGPAFPFYSRTAAEEYQIEVLGSMEP 282
Query: 195 -------GIVHDPKARLLGRHAGSAGLFSTIKDLQIFLE-----------HYLADDFARD 236
G VHD A L +G AGLFST++D I + L+ +
Sbjct: 283 QRPQPVRGTVHDKNAWALDGVSGHAGLFSTVEDTAILCQMILNNGTYGGRRILSPEVVDL 342
Query: 237 LNQNFSP-LDDKERSLAWNLEGDWL----------DHTGYTGTFIMWNRQKQEATIFLSN 285
+ NF+ E L + L + HTG+TGT ++ +R + +N
Sbjct: 343 IFHNFNARFPGYEHGLGFELNQYYTAGPMASLQTASHTGFTGTTLVIDRPSNTFFLLFAN 402
Query: 286 RTY 288
R +
Sbjct: 403 RVH 405
>gi|118468173|ref|YP_891012.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155]
gi|118169460|gb|ABK70356.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155]
Length = 506
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 69/242 (28%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESD------YPDITIRQLLTHAT 106
++DLAS++K + T L+E G++ +D V +LP+ + +T+R LLTH +
Sbjct: 158 LFDLASLTKSIATTTAVLQLYEQGKIRLDEPVQTYLPDFNPTGDPRRARVTLRMLLTHTS 217
Query: 107 DL--DPFIPNRDLLTAPELKEAMFHLNRRSQPA---------FLYSDVHFLLLGFILERI 155
+ D + LTA + E + +R+ A F YSD+ F++LG ++E+I
Sbjct: 218 GIAGDLSLDGPWGLTAADKAEGV----KRALAAWVVFEPGAMFHYSDIGFIILGTLVEKI 273
Query: 156 FNQDLDVILKDQVWKPWGMTETKF-------GPVEL------------------------ 184
Q LD +++ V+ P GM++T + GP E+
Sbjct: 274 TGQSLDGYVREHVFAPLGMSDTYYLPAANACGPHEIRGNALVSDPDGPRTTDCPADSWST 333
Query: 185 -----AVPTVRGVEA------------GIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEH 227
PT + G VHDP AR +G AGSAG+F+T+ DL +F +
Sbjct: 334 GLLTRVAPTALDEDTPGINPHFGLPLRGTVHDPTARRMGGVAGSAGVFTTVHDLGLFAQA 393
Query: 228 YL 229
L
Sbjct: 394 LL 395
>gi|148263854|ref|YP_001230560.1| beta-lactamase [Geobacter uraniumreducens Rf4]
gi|146397354|gb|ABQ25987.1| beta-lactamase [Geobacter uraniumreducens Rf4]
Length = 391
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 72/269 (26%), Positives = 116/269 (43%), Gaps = 35/269 (13%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESD---YPDITIRQLLTHATDLD 109
++D+AS++KV+ L E G+L + V + PE + D+ + LLTH + LD
Sbjct: 84 IFDIASLTKVIATTPAVLKLAEEGKLSLVDPVAKWYPEFNGQMKDDLLMVNLLTHTSGLD 143
Query: 110 PF-IPNRDLLTAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQV 168
F + +++ L A L F Y+D++F+LL ++R+ LD+
Sbjct: 144 DFPLSSQNSLQYAVNGAAAQKLKGAVGSRFRYADINFILLAESVKRVIGVGLDLYTTACF 203
Query: 169 WKPWGMTETKFGPVELAVP-------TVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDL 221
+ P GM +T F P + T + G V D +AR LG AG AGLFST DL
Sbjct: 204 FAPLGMKDTSFNPSRESTSRCAATLNTDNSLLVGQVQDYEARQLGGVAGHAGLFSTAGDL 263
Query: 222 QIFLEHYLADD--------FARDLNQNFSPLDDKE----RSLAWNLEGDW---------- 259
F L R +NQ +P + R L W+++ +
Sbjct: 264 ARFCRMLLNGGEYEGKRILSERTVNQMTAPYFSRGGKVVRGLGWDIDSPYSSPRGNGFSE 323
Query: 260 --LDHTGYTGTFIMWNRQKQEATIFLSNR 286
HTGY+G+ + + + L++R
Sbjct: 324 VSFGHTGYSGSSVWIDPASDTFVVLLTSR 352
>gi|110636440|ref|YP_676647.1| b-glycosidase, glycoside hydrolase family 3 protein [Cytophaga
hutchinsonii ATCC 33406]
gi|110279121|gb|ABG57307.1| b-glycosidase, glycoside hydrolase family 3 protein [Cytophaga
hutchinsonii ATCC 33406]
Length = 990
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 80/337 (23%), Positives = 134/337 (39%), Gaps = 80/337 (23%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
+YD+AS+SKV G FL E G + ++ + +LP+ ++ D+ IR +LTH L
Sbjct: 646 LYDIASISKVAGTLQAIMFLEERGLIKLNYKISVYLPDLIGTNKEDLIIRDILTHQAGLQ 705
Query: 110 PFIPN-RDLLTAPELKEAMFHL-------------------------------------- 130
PF+P+ R + + + +
Sbjct: 706 PFLPHWRKTMDSSNFSKKYYSTIKSDSFPNMVIPGLYSIAGIEDSLWKWTVQSSLMAHPK 765
Query: 131 -NRRSQP-AFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELAVPT 188
++ P +++YSD+ F ++ + E Q ++ LK + P G+ + P+E VP
Sbjct: 766 QGKKKLPYSYVYSDLGFYIMKRLAESQLGQPMEEFLKQNFYDPLGLQNFYYNPLENGVPA 825
Query: 189 VR------------GVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDF--- 233
R + G VHDP A LLG G AG+F +DL ++ L +
Sbjct: 826 SRITPTEQDKYFRKSLVVGTVHDPGAALLGGIGGHAGIFCNAEDLATLMQMNLQLGYYGG 885
Query: 234 ----ARDLNQNFSPLDDKE--RSLAWN-------------LEGDWLDHTGYTGTFIMWNR 274
+ + FS + R L W+ + HTG+TGT +
Sbjct: 886 YRFLLPETIELFSKTQSTKNRRGLGWDKPQASSGGPCSYLVSASTYGHTGFTGTCAWVDP 945
Query: 275 QKQEATIFLSNRTYEKDERAQWILD--RNQVMNLIRK 309
+++ IFLSNR Y + I + R Q+ +I K
Sbjct: 946 EQELVYIFLSNRVYPDANNTKLIKESIRTQIQTVIYK 982
>gi|119472255|ref|ZP_01614434.1| hypothetical protein ATW7_11746 [Alteromonadales bacterium TW-7]
gi|119445073|gb|EAW26368.1| hypothetical protein ATW7_11746 [Alteromonadales bacterium TW-7]
Length = 550
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 95/360 (26%), Positives = 146/360 (40%), Gaps = 83/360 (23%)
Query: 3 WTKIIKKIEEQIEAGIYPGASFAYFKDN--------------QWTEFYLGQSDPEHGLQT 48
+T + + IE I+AG +PGA A K+ Q + L + +P +QT
Sbjct: 158 FTDVDELIERDIKAG-FPGAVLAVVKNGELIKLTAYGDAKQYQQNDLMLLRPEP---MQT 213
Query: 49 EAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHA 105
++DLAS +K+ L GQL+I+ V +L E T+++LLTH+
Sbjct: 214 NT--LFDLASNTKIFATNFALMKLISEGQLNINNPVQSYLTEYTGGGREQRTVKELLTHS 271
Query: 106 TDLDPFIP-------------NRDLLTAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFIL 152
P +++ T +L LN + +YSD+ +++LG ++
Sbjct: 272 AGYPPVFDFHRKDTQQGDVFYSQNSQTTKQLLLTKVPLNNKKPMQHVYSDIDYMILGVLV 331
Query: 153 ERIFNQDLDVILKDQVWKPWGMTETKFGPV------------ELAVPTVRG--------- 191
ERI LD L+ V+KP ++ T F P+ EL+ T G
Sbjct: 332 ERITGLPLDEYLEQHVYKPLALSNTLFNPLKKGFERSQFAATELSGNTRDGRITFDNIRT 391
Query: 192 -VEAGIVHDPKARL-LGRHAGSAGLFSTIKDLQIFLEHYLADD--------FARDLNQNF 241
V G VHD +A G AG AGLFS DL + + L + A L Q
Sbjct: 392 HVLQGQVHDERAFYSFGGVAGHAGLFSNAHDLAVLCQLLLNNGGYGDQQLFSASALAQFL 451
Query: 242 SPLDDKER-SLAWNLEGD-----W----------LDHTGYTGTFIMWNRQKQEATIFLSN 285
+P E L + L G+ W HTG+TGT + + A + L+N
Sbjct: 452 TPQSTNETYGLGFRLAGNNQVRRWHFGPYASSQAYGHTGWTGTVTVIDPAYDLAIVLLTN 511
>gi|118469428|ref|YP_891075.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155]
gi|118170715|gb|ABK71611.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155]
Length = 349
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 87/293 (29%), Positives = 125/293 (42%), Gaps = 45/293 (15%)
Query: 54 YDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDP 110
+DLAS++K + V L E G L +D + + LP+ +D I + LLTH +
Sbjct: 55 WDLASMTKPI-VAIAVMSLIEDGVLTLDDTIAEHLPDYADTDKARIRVANLLTHTSG--- 110
Query: 111 FIPNRDLL-----TAPELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVI 163
IP R L EL A+ L P YS F+LLG I E LD +
Sbjct: 111 -IPGRQPLYQWNRARDELLTAIRRLPLLGPPGAQVSYSSPGFILLGLIAESAAGMPLDQL 169
Query: 164 LKDQVWKPWGMTETKFG--PVELAVPTV----RG-VEAGIVHDPKARLLGRHAGSAGLFS 216
+ ++V +P GM + F P ELAV T RG + G VHD A +LG AG AG+F+
Sbjct: 170 VAERVTRPAGMVDAGFASPPTELAVATEDDPWRGHLVRGEVHDENAVVLGAPAGHAGMFA 229
Query: 217 TIKDLQIFLEHYLADDF---ARDLNQN-----FSPLDDK---ERSLAWN----------- 254
T+ D++ A + R L +P D R+L W
Sbjct: 230 TLVDMEALGRTLCAQGWGAHGRVLTPAGYAAMITPRTDHLPLRRTLGWQGVDAVDATAGD 289
Query: 255 -LEGDWLDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERAQWILDRNQVMNL 306
+ D HTG+TGT + + + + L+NR + E R V N+
Sbjct: 290 LIGPDGYGHTGFTGTSLWIDPDRGSYVVLLTNRIHPNRENTAISRVRRAVNNI 342
>gi|118465211|ref|YP_883147.1| beta-lactamase [Mycobacterium avium 104]
gi|118166498|gb|ABK67395.1| beta-lactamase [Mycobacterium avium 104]
Length = 481
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 104/241 (43%), Gaps = 64/241 (26%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLP------ESDYPDITIRQLLTHAT 106
++DLAS++K + L+E G++ D V +LP + +TIR LLT+ +
Sbjct: 104 IFDLASLTKCLATAVAVMQLYEQGKVAFDDPVQKYLPAFNTTNDPQRAKVTIRMLLTNTS 163
Query: 107 DLDPFIPNRDL--LTAPELKEAM---FHLNRRSQPA--FLYSDVHFLLLGFILERIFNQD 159
+ RD L P+ E + +S PA F YSD+++LLLG +LE+I +D
Sbjct: 164 GEGIDVSLRDPWGLAGPDKAEGIHRALTTPLQSAPAGEFRYSDINYLLLGALLEKITGED 223
Query: 160 LDVILKDQVWKPWGMTETKFGPVELA---------------------------------- 185
D ++ V+ P GM +T++ P A
Sbjct: 224 EDDYVQHHVFGPLGMHDTRYLPPAKACGPHIIRGAAIAWAPNGEPMTECPEWTWRTTLLP 283
Query: 186 --VPTVRGVEA---------------GIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHY 228
PT R E+ G VHDP AR +G AG+AG+FST D+ ++ +
Sbjct: 284 RIAPTARDEESRDDPSKNPDYYALLRGTVHDPTARRMGGVAGNAGVFSTAHDVGVYAQAL 343
Query: 229 L 229
L
Sbjct: 344 L 344
>gi|118047534|ref|ZP_01516168.1| beta-lactamase [Chloroflexus aggregans DSM 9485]
gi|117995952|gb|EAV10159.1| beta-lactamase [Chloroflexus aggregans DSM 9485]
Length = 351
Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 72/272 (26%), Positives = 119/272 (43%), Gaps = 37/272 (13%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFI 112
+YDLAS++K+ L + G L +D +LPE IT+R LL+H + L +
Sbjct: 55 IYDLASLTKIF-TAIAALRLHDAGMLPLDLPARFWLPELANDAITVRHLLSHRSGLAVQL 113
Query: 113 PNRDLLTAPELKEAMFHLNRRSQPAFL--YSDVHFLLLGFILERIFNQDLDVILKDQVWK 170
A ++ A++ QP + Y++++ LLG ++ ++ L+ + + V
Sbjct: 114 APLARAGAHAIRHAVYAAPAVHQPGSVTEYANLNTFLLGEVVATVYGGPLEAAIDELVCA 173
Query: 171 PWGMTETKF----------GPVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKD 220
P GM T+F P E G+ G+VHD A LG AG AG+F D
Sbjct: 174 PLGMQYTRFCPPPEWRGRIAPTEWDWEWRGGLVHGVVHDESAYALGGIAGHAGMFGVATD 233
Query: 221 LQIFLEHYLADD-------------FARDLNQNFSPLDDKERS-LAWNLEGDWL------ 260
+ +E +L + A Q SP+D+++ S L W L ++
Sbjct: 234 VVRLIELWLCEGAWEGVQLLRTETVLAARTPQ--SPIDNQKVSGLGWMLRRPYMGPAGAI 291
Query: 261 --DHTGYTGTFIMWNRQKQEATIFLSNRTYEK 290
H+G+TG ++ A + L NRTY +
Sbjct: 292 AFGHSGFTGPIMIGIPTADIAVVVLCNRTYPQ 323
>gi|77359479|ref|YP_339054.1| hypothetical protein PSHAa0522 [Pseudoalteromonas haloplanktis
TAC125]
gi|76874390|emb|CAI85611.1| conserved protein of unknown function; putative peptidase with
beta-lactamase domain (partial match) [Pseudoalteromonas
haloplanktis TAC125]
Length = 553
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 98/353 (27%), Positives = 143/353 (40%), Gaps = 83/353 (23%)
Query: 10 IEEQIEAGIYPGASFAYFKDN--------------QWTEFYLGQSDPEHGLQTEAGLVYD 55
IE I+AG +PGA A K+ Q + L + +P +QT+ ++D
Sbjct: 168 IERDIKAG-FPGAVLAVVKNGELIKLTAYGDAKQYQQNDLMLLRPEP---MQTDT--LFD 221
Query: 56 LASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFI 112
LAS +K+ L G L+I++ V +LPE ++ LLTH+ P
Sbjct: 222 LASNTKIFATNFALMKLVSEGLLNINKPVQLYLPEYQGDGREQRRVKDLLTHSAGYPPVF 281
Query: 113 -------PNRDLL------TAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQD 159
N D+ T +L L+ +S +YSD+ +++LG ++ERI
Sbjct: 282 DFHRKDSSNGDVFYSQNSHTTKKLLLTSVPLSEKSLGQHVYSDIDYMILGVLVERITGLS 341
Query: 160 LDVILKDQVWKPWGMTETKFGPV------------ELAVPTVRG----------VEAGIV 197
LD L+ QV+ P + T F P+ EL T G V G V
Sbjct: 342 LDDYLEQQVYAPLKLHNTVFNPLKKGFNAQQFAATELGGNTRDGRIKFDNIRTHVLQGQV 401
Query: 198 HDPKARL-LGRHAGSAGLFSTIKDLQIFLEHYLADD--------FARDLNQNFSPL-DDK 247
HD +A LG AG AGLFS DL I + L + A L Q +P D+
Sbjct: 402 HDERAYYSLGGVAGHAGLFSNAPDLAILCQLLLNNGGYGDKQLFSASALAQFLTPQSSDE 461
Query: 248 ERSLAWNLEGD-----W----------LDHTGYTGTFIMWNRQKQEATIFLSN 285
L + L G+ W HTG+TGT + + A I L+N
Sbjct: 462 TYGLGFRLAGNNQARRWHFGPYASAQAYGHTGWTGTVTVIDPVYDLAIILLTN 514
>gi|145618149|ref|ZP_01774210.1| beta-lactamase [Geobacter bemidjiensis Bem]
gi|144945609|gb|EDJ80673.1| beta-lactamase [Geobacter bemidjiensis Bem]
Length = 381
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 112/270 (41%), Gaps = 40/270 (14%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
++D+AS++KV L E G++ + V+ + PE I + LLTH + LD
Sbjct: 77 IFDIASLTKVAATTPSVLKLAEEGRISLIDPVVKWFPEMAGHGKDSILVLHLLTHTSGLD 136
Query: 110 PF-----IPNRDLLTAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVIL 164
P R + ++ + R F Y+D++F+LL ++ R LDV
Sbjct: 137 DVQLYGDSPIRSAIEGAATQKLKGEVGSR----FRYADLNFILLAELVRRATGAPLDVYT 192
Query: 165 KDQVWKPWGMTETKFGPVE----LAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKD 220
+ ++P GMT+T F P A T + G V DP R LG AG AGLFST +D
Sbjct: 193 QASFYRPLGMTDTCFNPKREGRFCATLTEGRILMGEVQDPLCRQLGGVAGHAGLFSTARD 252
Query: 221 LQIFLEHYLADDF--------ARDLNQ----NFSPLDDKERSLAWNLEGDW--------- 259
L L AR ++Q FS R L W++ +
Sbjct: 253 LGRLCRMMLGGGTLDGRRVLAARTVDQMTAPYFSRGGGVVRGLGWDISSPFSSPRGNGFS 312
Query: 260 ---LDHTGYTGTFIMWNRQKQEATIFLSNR 286
HTGY+GT I + I L+ R
Sbjct: 313 RISFGHTGYSGTSIWIDPASDTFVILLTAR 342
>gi|94495000|ref|ZP_01301581.1| esterase [Sphingomonas sp. SKA58]
gi|94425266|gb|EAT10286.1| esterase [Sphingomonas sp. SKA58]
Length = 340
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 78/262 (29%), Positives = 109/262 (41%), Gaps = 36/262 (13%)
Query: 54 YDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDI--------TIRQLLTHA 105
+DLASVSKV+ T+ L E G+LD+DR + D +P+ D+ T R L H
Sbjct: 61 FDLASVSKVIATTTMILTLAEQGRLDLDRPLTDAIPDLRQYDVAHAAERRLTFRDCLAHR 120
Query: 106 TDLDPFIPNRDLLTAP-ELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVIL 164
T L P P L+ + R PA +YSD++F+LLG +ERI L
Sbjct: 121 TFLPAVEPIYTYGDDPARLRAFVLQREWRHGPA-VYSDINFILLGIAIERITGAPLSD-- 177
Query: 165 KDQVWKPWGMTETKFGP-----VELAVPTVRG-VEAGIVHDPKARLLGRHAGSAGLFSTI 218
P G FGP V + RG V G VHD A LG G AGLF T+
Sbjct: 178 -----SPLG-EGLSFGPPPGPAVATEACSWRGRVLKGEVHDENAYALGGAPGHAGLFGTV 231
Query: 219 KDLQIFLEHYL-ADDFARDLNQNFSPLDDKERSLAWN-----------LEGDWLDHTGYT 266
+ F L + + + R+ W + + HTG+T
Sbjct: 232 DGVLAFARAMLDGSILSPKMMAQVRTAQEGHRTCGWERAFPGWSGGDACSAETIGHTGFT 291
Query: 267 GTFIMWNRQKQEATIFLSNRTY 288
GT + + + A L+NR +
Sbjct: 292 GTGLWIDFDRGLAWTLLTNRVH 313
>gi|156743060|ref|YP_001433189.1| beta-lactamase [Roseiflexus castenholzii DSM 13941]
gi|156234388|gb|ABU59171.1| beta-lactamase [Roseiflexus castenholzii DSM 13941]
Length = 361
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 86/324 (26%), Positives = 131/324 (40%), Gaps = 51/324 (15%)
Query: 10 IEEQIEAGIYPGASFAYFKDN---QWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVG 66
+ + I I+PGA +D + D + +YD+AS++K+
Sbjct: 13 VADAIAQRIFPGAVVRVARDTIVLHNAAYGATTYDAPERIPVTPTTIYDIASLTKMF-TA 71
Query: 67 TVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPN-----RDLLTAP 121
T L+E +D++ V +LP ++TIR LLTH + LD + RD L A
Sbjct: 72 TAALRLYEECLIDLEAPVGAYLPAFRAHNVTIRHLLTHTSGLDLRLSTLCRSGRDALLA- 130
Query: 122 ELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF 179
++H P Y++++ LLLG I+ + Q LD + + +P G+ T F
Sbjct: 131 ----TVYHTLPAHPPGSRVAYTNINSLLLGEIVATVSGQPLDRAIDALICQPLGLRHTMF 186
Query: 180 GPVELAVPTVRGVE----------AGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL 229
P + + E G VHD A LG AG AGLFST DL F +L
Sbjct: 187 CPDSALLARIAPTEFDDAWRGRLVHGTVHDESAYALGGVAGHAGLFSTADDLWRFCRAWL 246
Query: 230 -------------ADDFARDLNQNFSPLDDKERSLAWNLE----------GDWLDHTGYT 266
+ A + S L L W L+ G + HTG+T
Sbjct: 247 PPTPDCAGGSFLQPETIALATTNHTSGL-TLACGLGWMLDRPNFMGPAPSGSY-GHTGFT 304
Query: 267 GTFIMWNRQKQEATIFLSNRTYEK 290
G ++ Q + I LSNR + +
Sbjct: 305 GPALVIIPQHRVIIIVLSNRVHPR 328
>gi|110600253|ref|ZP_01388478.1| Beta-lactamase [Geobacter sp. FRC-32]
gi|110549034|gb|EAT62235.1| Beta-lactamase [Geobacter sp. FRC-32]
Length = 391
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 75/277 (27%), Positives = 117/277 (42%), Gaps = 35/277 (12%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
++D+AS++KV+ L E G+L + V + PE D+ + LLTH + LD
Sbjct: 83 IFDIASLTKVIATTPAVLKLMEEGKLSLVDPVEKWYPEFYGHMKDDLLMANLLTHTSGLD 142
Query: 110 PF-IPNRDLLTAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQV 168
F + + + + + A + F Y+D++F+LL ++R LD
Sbjct: 143 DFPLSSENPIQSAVNGAATQRMKGSVWSRFKYADINFILLAESVKRASGNGLDTYAATSF 202
Query: 169 WKPWGMTETKFGPVE-------LAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDL 221
+KP GM +T F P + + T + + G D AR LG AG AGLFST DL
Sbjct: 203 FKPMGMKDTTFNPSQEDGQRCAATLDTDKTLMFGQAQDYVARQLGGVAGHAGLFSTAGDL 262
Query: 222 QIFLEHYLAD---DFARDLNQN---------FSPLDDKERSLAWNLEGDW---------- 259
F L + R L+Q FS R L W++ +
Sbjct: 263 ARFCRMMLNGGEYEGKRILSQRVIEQMTAPYFSRGGKVIRGLGWDINSPYSSPRGNYFSS 322
Query: 260 --LDHTGYTGTFIMWNRQKQEATIFLSNRTYEKDERA 294
HTGY+G+ I + I L++R K+ R+
Sbjct: 323 TSFGHTGYSGSSIWIDPYSDLFVILLTSRLDYKNTRS 359
>gi|94264234|ref|ZP_01288029.1| Beta-lactamase [delta proteobacterium MLMS-1]
gi|93455345|gb|EAT05549.1| Beta-lactamase [delta proteobacterium MLMS-1]
Length = 384
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 81/335 (24%), Positives = 138/335 (41%), Gaps = 62/335 (18%)
Query: 11 EEQIEAGIYPGAS----FAYFKDNQWTEFYLGQS--DPEHGLQTEAGLVYDLASVSKVVG 64
+E I AG++PGA+ F + GQ+ + + E +YDLAS++K +
Sbjct: 19 QEAITAGVFPGAAMAVGFGELSSRKTVINCFGQTAFNKNKRSRVEHKTLYDLASLTKPLA 78
Query: 65 VGTVCTFLWEIGQLDIDRLVIDFLP---ESDYPDITIRQLLTHATDLD---PF------- 111
+ L ++ D + D L D +IT+ LL H++ L PF
Sbjct: 79 TLPLVLQLLSAQRVGFDDKLADLLALRVPVDKANITLADLLGHSSGLPAWLPFFRNPASR 138
Query: 112 IPNRDLLTAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKP 171
+P ++ + + ++ R+ LYSD ++LLGFI+ERI +L + +++++P
Sbjct: 139 VPQESIVKSILAEPLVYQPGSRT----LYSDPGYILLGFIIERICRGELPELAAEKIYRP 194
Query: 172 WGMTETKFGPVELAVPTV----------RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDL 221
+ + F P + R + G V D LG AG AGLF I+ +
Sbjct: 195 LAVADGLFFNCPQKKPGIYAHGEYCPWRRRLLQGEVGDENCAYLGGAAGHAGLFGNIEAV 254
Query: 222 QIFLEHYLADDFARDLNQNFSPLDDKERSL------------AWNL-----------EGD 258
+EH + + + +P R L +W L GD
Sbjct: 255 MGMVEH-IHHRWQQQEQSTVAPTVFAPRELLSCLRPRAANPGSWLLGFDTPAPRGSSAGD 313
Query: 259 WLD-----HTGYTGTFIMWNRQKQEATIFLSNRTY 288
WL H G++GT + Q+Q + L+NR +
Sbjct: 314 WLSPASIGHLGFSGTSFWIDPQRQLTVVLLTNRVH 348
>gi|109900458|ref|YP_663713.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Pseudoalteromonas atlantica T6c]
gi|109702739|gb|ABG42659.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Pseudoalteromonas atlantica T6c]
Length = 818
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 94/364 (25%), Positives = 150/364 (41%), Gaps = 80/364 (21%)
Query: 2 KWTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYL----------GQSDPEHGLQTEAG 51
++ ++ I+ I G +PGA KD + + G+ PE + +
Sbjct: 424 RFAQVDALIQRDINNG-FPGAVLLVVKDGEIVKRTAYGDARQYADGGELLPE-SQKMQVD 481
Query: 52 LVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYP-----DITIRQLLTHAT 106
++D+AS +K+ L G+LD++ + ++P DY +R LLTH
Sbjct: 482 TLFDIASNTKMFATNLALMKLVSAGKLDVNAPIQRYMP--DYKGGGRETRLVRDLLTHTA 539
Query: 107 DLDP----FIP----NRDLLTAPELKEAMFHLNR------RSQPAFLYSDVHFLLLGFIL 152
P F P ++ L + + LNR R+ A +YSD ++LLG ++
Sbjct: 540 GYAPQVRFFTPENGVSKSLYSQNPQRTDQLLLNRVPFAMGRNVKA-VYSDTDYMLLGMLV 598
Query: 153 ERIFNQDLDVILKDQVWKPWGMTETKFGPV-------ELAVPTVRG-------------- 191
ERI LD ++ Q+++P G++ T F P+ E A ++G
Sbjct: 599 ERITGMGLDAYVEHQIYQPLGLSNTLFNPLLKGRAKGEFAATEIQGNSRGGRVNFDNMRE 658
Query: 192 -VEAGIVHDPKARL-LGRHAGSAGLFSTIKDLQIFLEHYLADD-------FARDLNQNFS 242
V G VHD KA LG AG AGLFST+ DL + + L F + Q F
Sbjct: 659 YVLQGEVHDEKAFYSLGGVAGHAGLFSTVDDLAVLGQLLLNGGGYGKTQIFDEAVLQQFI 718
Query: 243 PLDDKERS--LAWNLEG----DW----------LDHTGYTGTFIMWNRQKQEATIFLSNR 286
+++ S L W G W HTG+TGT + + + A L+N
Sbjct: 719 KPEERNDSYGLGWRRAGHGQSKWHFGPYASAQAYGHTGWTGTVSVIDPKYDLAIFLLTNA 778
Query: 287 TYEK 290
+ K
Sbjct: 779 RHSK 782
>gi|108798683|ref|YP_638880.1| beta-lactamase [Mycobacterium sp. MCS]
gi|119867800|ref|YP_937752.1| beta-lactamase [Mycobacterium sp. KMS]
gi|108769102|gb|ABG07824.1| beta-lactamase [Mycobacterium sp. MCS]
gi|119693889|gb|ABL90962.1| beta-lactamase [Mycobacterium sp. KMS]
Length = 528
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 66/243 (27%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPD------ITIRQLLTHAT 106
++DLAS++K + T L+E G++ D V +LPE + D +T+R LLTH +
Sbjct: 134 IFDLASLTKCLATATAVMQLYEQGKVQFDDPVQKYLPEFNRADDPQRARVTVRMLLTHTS 193
Query: 107 DLDPFIPNRDL--LTAPELKEAMFH-----LNRRSQPAFLYSDVHFLLLGFILERIFNQD 159
+P + D L E E + L+ + YSD++++LLG ++E++ +
Sbjct: 194 GEEPDVNLDDPWGLRRAEKGEGLHRALTSPLHSEPGAVYRYSDINYILLGALIEKVTGEA 253
Query: 160 LDVILKDQVWKPWGMTETKFGP--------------VELAVPTVRGVEA----------- 194
D ++ ++ P GM +T++ P + A GV A
Sbjct: 254 EDTYVERSIFSPLGMGDTRYLPPAEACGPRRMRGTAIGWAAARQSGVPAVCPAGTWNTSL 313
Query: 195 ----------------------------GIVHDPKARLLGRHAGSAGLFSTIKDLQIFLE 226
G VHD AR +G AG AG+FST +D+ I+ +
Sbjct: 314 FSRIAPTAHDDEGRRDPRTNPDWDQLLRGAVHDTTARRMGGVAGHAGVFSTARDVGIYAQ 373
Query: 227 HYL 229
L
Sbjct: 374 ALL 376
>gi|145221098|ref|YP_001131776.1| beta-lactamase [Mycobacterium gilvum PYR-GCK]
gi|145213584|gb|ABP42988.1| beta-lactamase [Mycobacterium gilvum PYR-GCK]
Length = 471
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 77/328 (23%), Positives = 129/328 (39%), Gaps = 94/328 (28%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLP------ESDYPDITIRQLLTHAT 106
V+D+AS++K + T L E G++ ID V +LP + +T+R LLTH +
Sbjct: 123 VFDIASLTKSLATATAVMQLHEQGRVRIDEPVQTYLPGFNPAGDPRRAAVTVRMLLTHTS 182
Query: 107 DL--DPFIPNRDLLTAPELKEAMFHLNRR-------SQPA--FLYSDVHFLLLGFILERI 155
+ D + L P+ + + RR S P F YSD++F++LG ++E+I
Sbjct: 183 GIAGDLSLDGPWGLAGPDKADGV----RRALGAWVVSDPGEGFHYSDINFIILGALVEKI 238
Query: 156 FNQDLDVILKDQVWKPWGMTETKFGPV--------------------------------- 182
+ D + V+ P M+ET++ PV
Sbjct: 239 TGEPEDSYVDRNVFAPLKMSETRYLPVTKVCGPHRVRGTAIAADPHGQAVDNCPDGTWNI 298
Query: 183 ---ELAVPTVRGVEA------------GIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEH 227
E PT + G VHDP AR +G AGSAG+F+T+ D+ F +
Sbjct: 299 DLLERIAPTALDEDTPGLNPDYGYPLRGTVHDPTARRMGGVAGSAGVFTTVHDMGRFAQA 358
Query: 228 Y------------LADDFARDLNQNFSPLDDKE-RSLAWNLEG------------DWLDH 262
L+ AR + P ++ R W+++ H
Sbjct: 359 LLDRVAGRPSPFPLSQAGARMMTTPQQPAPGRDLRGFGWDIDTAHSGPRGSVFPVGSFGH 418
Query: 263 TGYTGTFIMWNRQKQEATIFLSNRTYEK 290
TG+TG + + + + L N +++
Sbjct: 419 TGFTGVSVWLDPESDTYVVILGNVIHQR 446
>gi|154494473|ref|ZP_02033793.1| hypothetical protein PARMER_03828 [Parabacteroides merdae ATCC
43184]
gi|154085917|gb|EDN84962.1| hypothetical protein PARMER_03828 [Parabacteroides merdae ATCC
43184]
Length = 993
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 88/379 (23%), Positives = 139/379 (36%), Gaps = 104/379 (27%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWT-EFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTV 68
+E+ +E +PG KD + G D + + VYDLAS SK G
Sbjct: 589 VEDGLEQKAFPGCQVLVAKDGMIIYDKSFGYFDYDKKQAVDENSVYDLASSSKAAGTLLA 648
Query: 69 CTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDP--------------- 110
++ + ++ + DF+PE SD ++ ++ LL H + L P
Sbjct: 649 VMKAYDDKKFTLNNKISDFIPELKDSDKKNLAVKDLLYHQSGLTPTINFYLNAIDKDSYK 708
Query: 111 ---------------------------FIPN---------------RDLLTAPELKEAMF 128
F+PN R++ K+ +
Sbjct: 709 GSLYSNAKNQAHPVRFDARTYVRNDFSFLPNLVSARKKPGFTTEIARNMYLHDSFKDTII 768
Query: 129 HLNRRSQPA----FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVEL 184
+ S+ + YS ++F+LL ++E+ Q +D +L D + G T + P+ +
Sbjct: 769 QEIKDSRLGVRGKYKYSCINFILLKMMVEKQMRQPMDRLLHDMFFSKLGAWHTAYNPLHI 828
Query: 185 -----AVPTV------RGVEAGIVHDPKARLLGRHAGSAGLFSTIKD----LQIFL---- 225
VPT R + G VHD A G +G+AGLFS D LQ++L
Sbjct: 829 LDTMQIVPTENDHFIRRQLLRGYVHDEAAAFQGGVSGNAGLFSNANDLAKVLQLYLNQGS 888
Query: 226 ---EHYLADDFARDLNQNFSPLDDKERSLAWN---------------LEGDWLDHTGYTG 267
E YL+ + R Q+ SP R L ++ HTG+TG
Sbjct: 889 YGGEQYLSKETCRLFTQSKSP--TCRRGLGFDKPVAGGGKASPCGSLAPASVYGHTGFTG 946
Query: 268 TFIMWNRQKQEATIFLSNR 286
T + IFLSNR
Sbjct: 947 TCFWVDPDNNLLYIFLSNR 965
>gi|20806757|ref|NP_621928.1| Beta-lactamase class C and other penicillin binding proteins
[Thermoanaerobacter tengcongensis MB4]
gi|20515216|gb|AAM23532.1| Beta-lactamase class C and other penicillin binding proteins
[Thermoanaerobacter tengcongensis MB4]
Length = 230
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 97/217 (44%), Gaps = 47/217 (21%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
++DLASV+KV+G L +L + V++F+PE + DITI LLTH + L
Sbjct: 6 IFDLASVTKVMGTTQAIMKLVYENRLKVADKVVEFIPEFGQNGKEDITISDLLTHTSGLP 65
Query: 110 PFIPNRDLLTAPELKEAM-----FHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVIL 164
+ P A K+++ HL + YSD+ F++LG+++E I + LDV L
Sbjct: 66 AWKP--IYYHASNSKDSLKYICALHLEYKPGTNRKYSDIGFMVLGYVIEIITGKRLDVYL 123
Query: 165 KDQVWKPWGMTETKFGPVE----------------------LAVPTVRGVEAGIVHDPKA 202
+++++ P GM T F P + + V VE I K
Sbjct: 124 REEIYLPLGMKNTLFNPFKYLENPRDKVAATSWGNPYEYKMIKEKNVYQVEENINEWNKW 183
Query: 203 R---LLGRH------------AGSAGLFSTIKDLQIF 224
R L+G AG AGLFST+ DL +
Sbjct: 184 RNYTLIGEANDGNCFYANEGIAGHAGLFSTVSDLAVL 220
>gi|86607829|ref|YP_476591.1| carboxylesterase, beta-lactamase family [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556371|gb|ABD01328.1| carboxylesterase, beta-lactamase family [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 383
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 91/321 (28%), Positives = 133/321 (41%), Gaps = 71/321 (22%)
Query: 38 GQSDPEHGLQ-TEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE------ 90
G DPE Q T + +DLAS++K+ T C L E G L +D+ V LPE
Sbjct: 40 GHLDPETRRQPTTSATRFDLASLTKLY-TATACMALVEAGALLLDQPVSLLLPEFQGSRP 98
Query: 91 -SDYPD-----------------------ITIRQLLTHATDLDPFIPNRDLLTAPELKEA 126
+ Y D +T+RQLL H L + P A +
Sbjct: 99 IAPYEDPLQPGKWIAVEPESLGQLVATEQVTVRQLLAHTAGLPAWRPLFRQPDAESARHM 158
Query: 127 MFH--LNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVEL 184
H L R +YSD+ +LLG LER+ LD IL ++ +P G+++T+F P +
Sbjct: 159 ALHTFLAYRPGSRRVYSDLGLILLGLALERLSGTPLDQILHARILRPLGLSQTQFYPGDP 218
Query: 185 AVPT-VRGVEA-------------GIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLA 230
P+ V G A G VHD A LG AG AGLF+T +++ F E +L
Sbjct: 219 FDPSSVSGSCAPTELCPWRKRRLQGQVHDENAARLGGIAGHAGLFATAEEVAAFGESFLT 278
Query: 231 DDF-----ARDLNQNFSPLD------DKERSLAWNLEG-DWL-----------DHTGYTG 267
R++ + P + R L + L D L HTG+TG
Sbjct: 279 GSLLQPQTVREMTREQLPQQGDAHRCHERRGLGFALRSPDPLASSSPFSPSAFGHTGFTG 338
Query: 268 TFIMWNRQKQEATIFLSNRTY 288
T + + +++ L+N Y
Sbjct: 339 TSLWIDPERELVVTLLTNAVY 359
>gi|154684690|ref|YP_001419851.1| YbbE [Bacillus amyloliquefaciens FZB42]
gi|154350541|gb|ABS72620.1| YbbE [Bacillus amyloliquefaciens FZB42]
Length = 427
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 87/366 (23%), Positives = 146/366 (39%), Gaps = 86/366 (23%)
Query: 2 KWTKIIKKIEEQIEAGIYPGASFAYFKDNQ--------WTEFYLGQSDPEHGLQTEAGLV 53
K K+ + IE+ I AG +PGA KD + +++ Y G + + + +
Sbjct: 34 KLRKVDQMIEKDIAAG-FPGAVLVVVKDGRVIKKKAYGYSKKYDGNTLLSRPKKMKTSTM 92
Query: 54 YDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPD-----------ITIRQLL 102
+DLAS +K+ L G+LD+ + V +LP D+ D I + +L
Sbjct: 93 FDLASNTKMYAANFALQRLVSQGKLDVYQKVSAYLP--DFKDRKSDPIQEKDRIRVIDVL 150
Query: 103 THATDLDPFIPNRDLLTAPELKEAMFHLNRRSQPAFL--------------YSDVHFLLL 148
H + L P P+ ++ R FL YSD+ ++LL
Sbjct: 151 QHQSGL----PASFYFYQPDTAGPLYSQERDKTIRFLTQIPLAYKPGTKHVYSDIGYMLL 206
Query: 149 GFILERIFNQDLDVILKDQVWKPWGMTETKFGPVE---------------------LAVP 187
G I+E I + LD + +++KP +T T F P++ + P
Sbjct: 207 GCIIENITGKTLDAYAEQELYKPLKLTHTLFNPLQKGFKEKAFAATERLGNTRDGVIHFP 266
Query: 188 TVRGVE-AGIVHDPKARL-LGRHAGSAGLFSTIKDLQIFLEHYLADDFARDL---NQNFS 242
+R G VHD KA +G +G AGLFS D+ + L+ L + + N+ +
Sbjct: 267 HIRTYTLQGEVHDEKAFYSMGGVSGHAGLFSRADDMAVLLQVMLNGGSYKHVSLFNKRTA 326
Query: 243 PL------DDKERSLAWNLEG----DWL----------DHTGYTGTFIMWNRQKQEATIF 282
L D +L W G +W+ HTG+TGT + + +
Sbjct: 327 DLFTTAASSDPTFALGWRKNGSPDMEWMFGPYASWQAYGHTGWTGTITIIDPAYKLGIAL 386
Query: 283 LSNRTY 288
L+N+ +
Sbjct: 387 LTNKKH 392
>gi|94266207|ref|ZP_01289916.1| Beta-lactamase [delta proteobacterium MLMS-1]
gi|93453214|gb|EAT03672.1| Beta-lactamase [delta proteobacterium MLMS-1]
Length = 374
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 80/335 (23%), Positives = 137/335 (40%), Gaps = 62/335 (18%)
Query: 11 EEQIEAGIYPGAS----FAYFKDNQWTEFYLGQS--DPEHGLQTEAGLVYDLASVSKVVG 64
+E I AG++PGA+ F + GQ+ + + E +YDLAS++K +
Sbjct: 19 QEAITAGVFPGAAMAVGFGELSSRKTVINCFGQTAFNKNKRSRVEHKTLYDLASLTKPLA 78
Query: 65 VGTVCTFLWEIGQLDIDRLVIDFLP---ESDYPDITIRQLLTHATDLD---PF------- 111
+ L ++ D + D L D +IT+ LL H++ L PF
Sbjct: 79 TLPLVLQLLSAQRVGFDDKLADLLALRVPVDKANITLADLLGHSSGLPAWLPFFRNPASR 138
Query: 112 IPNRDLLTAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKP 171
+P ++ + + ++ R+ LYSD ++LLGFI+ERI +L + +++++
Sbjct: 139 VPQESIVKSILAEPLVYQPGSRT----LYSDPGYILLGFIIERICRGELPELAAEKIYRT 194
Query: 172 WGMTETKFGPVELAVPTV----------RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDL 221
+ + F P + R + G V D LG AG AGLF I+ +
Sbjct: 195 LAVADGLFFNCPQKKPGIYAHGEYCPWRRRLLQGEVGDENCAYLGGAAGHAGLFGNIEAV 254
Query: 222 QIFLEHYLADDFARDLNQNFSPLDDKERSL------------AWNL-----------EGD 258
+EH + + + +P R L +W L GD
Sbjct: 255 MGMVEH-IHHRWQQQEQSTVAPTVFAPRELLSCLRPRAANPGSWLLGFDTPASRGSSAGD 313
Query: 259 WLD-----HTGYTGTFIMWNRQKQEATIFLSNRTY 288
WL H GY+GT + Q++ + L+NR +
Sbjct: 314 WLSPASIGHLGYSGTSFWIDPQRRLTVVLLTNRVH 348
>gi|150008942|ref|YP_001303685.1| glycoside hydrolase family 3, candidate beta-glycosidase
[Parabacteroides distasonis ATCC 8503]
gi|149937366|gb|ABR44063.1| glycoside hydrolase family 3, candidate beta-glycosidase
[Parabacteroides distasonis ATCC 8503]
Length = 999
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 88/377 (23%), Positives = 140/377 (37%), Gaps = 100/377 (26%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWT-EFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTV 68
++E ++ YPG KD G D E VYDLAS SK G
Sbjct: 588 VKEGLDEKAYPGCQVLVAKDGMIIYNKSFGYFDYESRQPVTEASVYDLASASKAAGTLLA 647
Query: 69 CTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTH-------------ATDLDPF- 111
++ + ++ + DF+PE S+ D++I++LL H A D D +
Sbjct: 648 VMKAYDEKKFTLNNKISDFIPELKESNKKDLSIKELLYHQSGVTPTINFYLDAIDKDSYK 707
Query: 112 ----------------------------IPN---------------RDLLTAPELKEAMF 128
+P+ R+ + K+ +
Sbjct: 708 GSLYSSAKNATHPVRFDAKTYVRNDFKYLPDIVSDTRKPGFTTEVARNFYVSDSFKDTIL 767
Query: 129 HLNRRSQPA----FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVEL 184
++S+ ++YS V+F++L ++E + +D +L+D + G T + P++
Sbjct: 768 QDIKKSRLGTRGRYVYSCVNFIMLKMMVENLMKSPMDQLLRDDFYSGLGAWHTTYNPLKR 827
Query: 185 A-----VPTV------RGVEAGIVHDPKARLLGRHAGSAGLFSTIKD----LQIFL---- 225
VPT R + G VHD A G +G+AGLFS D LQ+ L
Sbjct: 828 MDTLQIVPTEQDGFVRRQLLRGYVHDEAAAFQGGVSGNAGLFSNANDLAKVLQLMLNQGT 887
Query: 226 ---EHYLADDFARDLNQNFSPL-------------DDKERSLAWNLEGDWLDHTGYTGTF 269
E YL+ + +R Q+ SP + K HTG+TGT
Sbjct: 888 YGGERYLSLETSRLFTQSKSPTCRRGLGFDKPVIGNPKASPCGALAPASVYGHTGFTGTC 947
Query: 270 IMWNRQKQEATIFLSNR 286
+ Q IFLSNR
Sbjct: 948 FWVDPDNQLIYIFLSNR 964
>gi|121543724|ref|ZP_01675285.1| putative beta-lactamase [Candidatus Desulfococcus oleovorans Hxd3]
gi|121516454|gb|EAX53421.1| putative beta-lactamase [Candidatus Desulfococcus oleovorans Hxd3]
Length = 360
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 79/331 (23%), Positives = 132/331 (39%), Gaps = 53/331 (16%)
Query: 10 IEEQIEAGIYPGASFAYFKDN--QWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGT 67
++E + G++PG + ++ + Y G +D E V+DLAS++K +
Sbjct: 8 MKEGVAIGVFPGGVLCVWVKGAVRFCKAY-GVTDLESRHPVTTDTVFDLASLTKPLATAP 66
Query: 68 VCTFLWEIGQLDIDRLV---IDFLPESDYPDITIRQLLTHATDLDPFIPN-RDLLTA--- 120
L + G L ++ +D D +ITI LL H + L DL T
Sbjct: 67 AILKLADQGFLSVEDPAGKYLDGFDAGDKKEITIAHLLCHTSGLPAHREYFYDLSTTAFE 126
Query: 121 ---PELKEAMFH--LNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMT 175
P LK+ + + L R +YSD+ +++LGFI++ + LD D++++P +
Sbjct: 127 DRQPALKKLLENEPLEYRPGEKVVYSDLGYMVLGFIVKAVSGLALDRFATDRLYRPLAIF 186
Query: 176 ETKFGPV--ELAV---------------PTVRGVEAGIVHDPKARLLGRHAGSAGLFSTI 218
+ F P+ E AV P + V G+VHD A +G AG AGLF T
Sbjct: 187 DLFFIPINPETAVNNPLGLSNVAATENCPRRKMVVRGVVHDDNAYEMGGVAGQAGLFGTA 246
Query: 219 KDLQIF---------------------LEHYLADDFARDLNQNFSPLDDKERSLAWNLEG 257
+ F H +A + F +D + S
Sbjct: 247 GAVTAFAAEILDVYSGAKPGPVFSSAMAAHMMAPQCGTNRTFGFDTVDPENSSAGRLFSA 306
Query: 258 DWLDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
H G+TGT + ++ + L+NR +
Sbjct: 307 RGAGHLGFTGTSCWIDPDREAVVVLLTNRVH 337
>gi|84495405|ref|ZP_00994524.1| putative beta-lactamase [Janibacter sp. HTCC2649]
gi|84384898|gb|EAQ00778.1| putative beta-lactamase [Janibacter sp. HTCC2649]
Length = 374
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 90/325 (27%), Positives = 130/325 (40%), Gaps = 59/325 (18%)
Query: 20 PGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEI--GQ 77
PGA + + + G D G EA ++DLASV+K+V T CT + + G
Sbjct: 25 PGAVVGAWSSERAQVWVAGSCDTA-GAPMEADTIHDLASVTKLV---TTCTLMALVSRGD 80
Query: 78 LDIDRLVIDFLPESDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAMFHLNRRSQP- 136
LD+D V + S PD T RQLL H L P+ P A+ R P
Sbjct: 81 LDLDWPVSRHISWSG-PDPTTRQLLQHRAGLLPWQPLHHAARRSADVHALVPALPRGGPM 139
Query: 137 --AFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMT------------------- 175
AF YSD+ F+ LG ++E I LDV L + V +P G+
Sbjct: 140 DLAFAYSDLSFITLGAVVEAITGHPLDVSLSELVTRPLGLGLHYRPSFDSPHDAHSVAES 199
Query: 176 -----------------ETKFGPVELAVPTVR--GVEAGIVHDPKA-RLLGRHAGSAGLF 215
P P R G G VHD A +G +G AGLF
Sbjct: 200 ALDESWEERMIATGQPYAVHLAPDPQLSPVTRRPGPIGGTVHDGNAFHAMGGVSGHAGLF 259
Query: 216 STIKDLQIFLEHYLADD----FARDLNQNF-SPLDDKERSLAWNL----EGDWLDHTGYT 266
T+ DL + L L D ++ D+ + F +P D ++L + + G H G+T
Sbjct: 260 GTVPDL-VSLGQALLDTTHGLWSSDVVEEFTTPGPDPLQALGFRVRPLPRGRLAWHPGFT 318
Query: 267 GTFIMWNRQKQEATIFLSNRTYEKD 291
GT + + A I ++ + +D
Sbjct: 319 GTALGVRLGGEPAVIAMATNRHLQD 343
>gi|88802422|ref|ZP_01117949.1| beta-N-acetylglucosaminidase [Polaribacter irgensii 23-P]
gi|88781280|gb|EAR12458.1| beta-N-acetylglucosaminidase [Polaribacter irgensii 23-P]
Length = 973
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 70/318 (22%), Positives = 133/318 (41%), Gaps = 73/318 (22%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLP---ESDYPDITIRQLLTHATDLD 109
+YD+AS++K++ + E ++ + + D LP ++ ++T++++L+H L
Sbjct: 637 LYDVASLTKILATLPLLMQAEEEHRISVTDQLADILPFFKNTNKAELTVKEMLSHTAKLK 696
Query: 110 PFIP----NRDLLTAPEL--------------------------KEAMFH----LNRRSQ 135
+IP +D +T L K++++ ++R +
Sbjct: 697 AWIPFYKATQDSITGENLSNYYRTEKSKEFRTKVTENLFLKSNYKDSIYKQIALADQREE 756
Query: 136 PAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVEL-----AVPTVR 190
+ YSD+ + L LE + + L++++ + +KP G + P+E VPT +
Sbjct: 757 AGYKYSDLGYYLFKQALENSYKKALNILVDVKFYKPLGAHRIGYLPLERFDKQEIVPTEK 816
Query: 191 GVE------AGIVHDPKARLLGRHAGSAGLFSTIKD----LQIFLE-------------- 226
G VHD A +LG G AG+F+ D +Q++L+
Sbjct: 817 DTYYRHQLLQGDVHDMGAAMLGGVGGHAGIFANANDVGKIMQLYLQKGFYGGRRYLKAET 876
Query: 227 ------HYLADD-FARDLNQNFSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEA 279
Y +DD R L + LD K + + + H+G+TGT+ + +
Sbjct: 877 IDKFNHRYFSDDKVRRGLGFDKPQLDPKVMATCGCVSDESFGHSGFTGTYTWADPKSGLV 936
Query: 280 TIFLSNRTYEKDERAQWI 297
+FLSNR Y E + I
Sbjct: 937 YVFLSNRVYPNAENRELI 954
>gi|16077235|ref|NP_388048.1| hypothetical protein BSU01670 [Bacillus subtilis subsp. subtilis
str. 168]
gi|23822303|sp|O05213|YBBE_BACSU UPF0214 protein ybbE precursor
gi|2632434|emb|CAB11943.1| ybbE [Bacillus subtilis subsp. subtilis str. 168]
Length = 441
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 83/361 (22%), Positives = 144/361 (39%), Gaps = 76/361 (21%)
Query: 4 TKIIKKIEEQIEAGI---YPGASFAYFKDNQ--------WTEFYLGQSDPEHGLQTEAGL 52
TK ++K+++ IE I +PGA KD + +++ Y G + +
Sbjct: 46 TKKLRKVDQMIERDIAAGFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRT 105
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITI----RQLLTHATD 107
++DLAS +K+ L G+LD+ V +LP D P I R + ++
Sbjct: 106 MFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKTRYVSLMSSS 165
Query: 108 LDPFIPNRDLLTAPELKEAMFHLNRRSQPAFL--------------YSDVHFLLLGFILE 153
+ +P+ PE + R +L YSD+ ++LLG I+E
Sbjct: 166 TNSGLPSSFYFYTPEKAGKYYSQERDKTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVE 225
Query: 154 RIFNQDLDVILKDQVWKPWGMTETKFGPVE---------------------LAVPTVR-G 191
++ + LDV + +++KP + T + P++ + P +R
Sbjct: 226 KLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTN 285
Query: 192 VEAGIVHDPKARL-LGRHAGSAGLFSTIKDLQIFLEHYLADDFARDL---NQNFSPL--- 244
G VHD KA + +G AGLFS D+ I L+ L R++ +Q + L
Sbjct: 286 TLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTA 345
Query: 245 ---DDKERSLAWNLEG----DWL----------DHTGYTGTFIMWNRQKQEATIFLSNRT 287
D +L W G +W+ HTG+TGT + + L+N+
Sbjct: 346 PSATDPTFALGWRRNGSKSMEWMFGPHASENAYGHTGWTGTVTIIDPAYNLGIALLTNKK 405
Query: 288 Y 288
+
Sbjct: 406 H 406
>gi|149280310|ref|ZP_01886432.1| beta-N-acetylglucosaminidase [Pedobacter sp. BAL39]
gi|149228999|gb|EDM34396.1| beta-N-acetylglucosaminidase [Pedobacter sp. BAL39]
Length = 604
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 75/307 (24%), Positives = 124/307 (40%), Gaps = 66/307 (21%)
Query: 45 GLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPD---ITIRQL 101
GL ++DLAS++K L E +L++D + ++P++ I +R+
Sbjct: 268 GLPERVTDIFDLASLTKTTATTPSVMRLVEQHKLNLDTNIGAYIPKARLTPMNPIMVREA 327
Query: 102 LTHATDLDPFIPNRDLLTAPE-----------------------LKEAMF--HLNR--RS 134
+ H P+IP D + + KE M+ LN R+
Sbjct: 328 MLHQAGFIPYIPFHDAVKTGDYSRDSSAAYPTKVADNYYVRKDYFKEVMWPKMLNAPIRT 387
Query: 135 QPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGP-----VELAVPTV 189
+ ++YSD+ ++ I+ER+ + L+ + + +KP GM F P E VPT
Sbjct: 388 RGKYVYSDISMYVMKDIVERLSGEPLNDYVWENFYKPLGMQTAGFLPRNRFSKEQIVPTE 447
Query: 190 ------RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL-------------- 229
+ + G VHD A L G +G AGLF++ D+ I + L
Sbjct: 448 QDNYFRKTLLEGYVHDQGAALAGGISGHAGLFASANDVAILYQMLLNRGSYGGTQYFQPE 507
Query: 230 -ADDFARDLNQ---------NFSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEA 279
D F + ++ + P D +R + HTGYTGT + + K
Sbjct: 508 TVDTFTKKQSEVSRRGLGFDRWDP-DSSKRYPSELASPQTYGHTGYTGTCVWVDPAKGLV 566
Query: 280 TIFLSNR 286
+FLSNR
Sbjct: 567 YVFLSNR 573
>gi|66820226|ref|XP_643747.1| hypothetical protein DDBDRAFT_0167483 [Dictyostelium discoideum
AX4]
gi|19569868|gb|AAL92187.1| similar to Chlorobium tepidum. D-alanyl-D-alanine
carboxypeptidease, putative [Dictyostelium discoideum]
gi|60471880|gb|EAL69834.1| hypothetical protein DDBDRAFT_0167483 [Dictyostelium discoideum
AX4]
Length = 451
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 84/380 (22%), Positives = 151/380 (39%), Gaps = 97/380 (25%)
Query: 3 WTKIIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQT----------EAGL 52
W+++ +EE IE G +PG A + + + + +G+ T E
Sbjct: 47 WSEVDTFLEEAIENGTFPGC-VALVGNQKGVLYASAKGSFTYGIGTPINDFKVPPMELST 105
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFL----PESDYPDITIRQLLTHAT-- 106
++D+AS SKV T ++ G+L++D + DFL + I++R L H +
Sbjct: 106 LFDMASCSKVTACTTSVAQFYQRGELNLDSPITDFLGLEFGVNGKSGISVRNCLLHNSGF 165
Query: 107 --DLDPF--------------IPNRDLLTAPELKEAMFH--LNRRSQPAFLYSDVHFLLL 148
D +PF P + ++ +++ + L ++YSD++F+ L
Sbjct: 166 YPDPNPFWNTAEFNCPATEEYYPPMEFTCQSQIYQSILNQSLMNPIGSTYVYSDLNFMTL 225
Query: 149 GFILERIFNQDLDVILKDQ------------------------VWKPWGMTETKFGPVEL 184
+++ + Q + I DQ V+ + T + P +
Sbjct: 226 MYVVGNLAKQ-FNYITADQLTPGCDNGAPENAQCYYEAYVRHYVFNALNLNVTNYLPPQY 284
Query: 185 AVPTVRGVE----------AGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL-ADDF 233
P E G+V D A LG +G AG+FS ++++ IF+ + A+
Sbjct: 285 LAPQCAPTENDTVYMHTTIQGVVSDGNAYALGGISGHAGVFSNVEEMWIFMYSLMFAEAN 344
Query: 234 ARDLN----QNFSP---LDDKERSLAWNL-------EG-----------DWLDHTGYTGT 268
++ LN Q F+ R+L WN EG W+ H GYTGT
Sbjct: 345 SQYLNSTTVQYFTTEYNHTQSSRALGWNTNDPSVFDEGWGLACGTLSAKTWM-HLGYTGT 403
Query: 269 FIMWNRQKQEATIFLSNRTY 288
+ + +++ I L+NR Y
Sbjct: 404 MLCGDPERELIVILLTNRVY 423
>gi|86605682|ref|YP_474445.1| carboxylesterase, beta-lactamase family [Synechococcus sp.
JA-3-3Ab]
gi|86554224|gb|ABC99182.1| carboxylesterase, beta-lactamase family [Synechococcus sp.
JA-3-3Ab]
Length = 383
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 87/322 (27%), Positives = 129/322 (40%), Gaps = 73/322 (22%)
Query: 38 GQSDPEHGLQ-TEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE------ 90
G DPE Q T + +DLAS++K+ T C L E G L +D+ V LPE
Sbjct: 40 GYLDPETRRQPTTSATRFDLASLTKLY-TATACMALVEAGALLLDQPVSLLLPEFQGSRP 98
Query: 91 -SDYPD-----------------------ITIRQLLTHATDLDPFIPNRDLLTAPELKEA 126
+ Y D +T+RQLL H L + P A +
Sbjct: 99 IAPYEDPLQPGEWIAAEPESLGQLMAAEQVTVRQLLAHTAGLPAWRPLFRQPDAESARHM 158
Query: 127 MFH--LNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF----- 179
H L R +YSD+ +LLG LER+ LD IL ++ +P G+++T+F
Sbjct: 159 ALHTFLAYRPGSRRVYSDLGLILLGLALERLSGTPLDQILHARILQPLGLSQTQFYPGDP 218
Query: 180 ----------GPVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL 229
P EL R ++ G VHD A LG AG AGLF+T +++ F E +L
Sbjct: 219 FDPPPVSVSCAPTELCPWRKRRLQ-GQVHDENAARLGGIAGHAGLFATAEEVAAFGESFL 277
Query: 230 ADDF-----ARDLNQNFSPLD------DKERSLAWNLEG------------DWLDHTGYT 266
R++ + P + R L + L HTG+T
Sbjct: 278 TGSLLQPQTVREMTREQLPQQGDAHRCHERRGLGFALRSPDPLASSYPFSPSAFGHTGFT 337
Query: 267 GTFIMWNRQKQEATIFLSNRTY 288
G + + +++ L+N Y
Sbjct: 338 GPSLWIDPERELVVTLLTNAVY 359
>gi|88805315|ref|ZP_01120834.1| beta-N-acetylglucosaminidase [Robiginitalea biformata HTCC2501]
gi|88784133|gb|EAR15303.1| beta-N-acetylglucosaminidase [Robiginitalea biformata HTCC2501]
Length = 971
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 80/352 (22%), Positives = 148/352 (42%), Gaps = 75/352 (21%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGL--VYDLASVSKVVGVGT 67
++ +++ ++PGA ++ Q F+ + E L +YDLAS++K++G
Sbjct: 595 MQHGLDSLMFPGAQVLVARNGQ-VVFHKAYGKHTYDGDREVQLTDLYDLASLTKILGTLP 653
Query: 68 VCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFI------------ 112
V + E G++ ++ + LPE ++ D+T+ + L+H L +I
Sbjct: 654 VLMEMEETGKIRLNATFSELLPEYADTELEDVTVLKALSHYGRLPSWIAFYLDTLDKQRR 713
Query: 113 PNRDLL-TAP------ELKEAMFHLNRRSQPA-------------FLYSDVHFLLLGFIL 152
P+RD +P ++ E+++ N + + YSDV + + +
Sbjct: 714 PSRDFYRNSPQEGFSIQVAESLYLTNAYTDSIYNRIGRQELKSNRYRYSDVAYYVFKKYI 773
Query: 153 ERIFNQDLDVILKDQVWKPWGMTETKFGPVEL-----AVPT-------VRGVEAGIVHDP 200
E + + LD I + +++P G + T + P+E VPT + V+ G VHD
Sbjct: 774 EEQYGRRLDAIAGEFLFRPLGASHTLYNPLERFEKADIVPTEEDNYYRYQRVQ-GFVHDM 832
Query: 201 KARLLGRHAGSAGLFSTIKDLQIFLEHYLADDF-----------ARDLNQNFSPLDDKER 249
A + G AGLFS D+ ++ YL + N+ + +D R
Sbjct: 833 GAAMQDGVGGHAGLFSNANDVAKIMQMYLQGGYYGGTRFLEARTVEKFNKCYFCNNDVRR 892
Query: 250 SLAWN---LEGDW----------LDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
+ ++ LE H+G+TGT+ + +FLSNRTY
Sbjct: 893 GVGFDKPQLEDKGPTCGCVSRRSFGHSGFTGTYTWADPDTGILYVFLSNRTY 944
>gi|126645496|ref|ZP_01718040.1| beta-N-acetylglucosaminidase [Algoriphagus sp. PR1]
gi|126578907|gb|EAZ83071.1| beta-N-acetylglucosaminidase [Algoriphagus sp. PR1]
Length = 431
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 80/339 (23%), Positives = 141/339 (41%), Gaps = 80/339 (23%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLP----ESDYPDITIRQLLTHATDL 108
+YDLASV+K+ G L + G+LD+D + D +T+R++L H L
Sbjct: 91 LYDLASVTKISGPLPAIMKLVDEGKLDLDEPFSTYWKPWRHRKDKKVLTLREILAHQAGL 150
Query: 109 DPFIP--NRDLLTAPELKEAMFH------------------------LNR-------RSQ 135
P+I N+ + ++K+ H +NR +
Sbjct: 151 VPYIVFLNKVVRKNGKIKKRFVHDTSDKRFHAQAYDGIYIKDRFERKMNRMINRSKVSDE 210
Query: 136 PAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVE-----LAVPTV- 189
+LYS + FL+ ++E+I D L++ ++P G + P + VPT
Sbjct: 211 KKYLYSGLTFLIYPTLIEQITGTDYQSYLEENFYQPIGANTLGYLPEKKNYDNAIVPTEV 270
Query: 190 -----RGVEAGIVHDPKARLLGRHAGSAGLFSTIKD---LQIFLEHY--------LADDF 233
+ + G VHD A L G +G+AGLF T D L +F ++Y ++ +
Sbjct: 271 DSLFRKTLVKGWVHDENAALKGGVSGNAGLFGTADDLAKLMLFYQNYGLVNGQQLISAET 330
Query: 234 ARDLNQNFSPLDDKERSLAWN-------------------LEGDWLDHTGYTGTFIMWNR 274
++ + P +D R L ++ + H+G+TGTF+ +
Sbjct: 331 VKEFTEVQFPENDNRRGLGFDKPLLNNSELPLSEAYPSPLASPESFGHSGFTGTFVWADP 390
Query: 275 QKQEATIFLSNRTY-EKDERAQWILD-RNQVMNLIRKEE 311
+ IFLSNR Y +D + + L+ R +M++ + E
Sbjct: 391 INKITYIFLSNRVYPSRDHQKLYGLNIRTALMDVFYQAE 429
>gi|121714206|ref|XP_001274714.1| beta-lactamase, putative [Aspergillus clavatus NRRL 1]
gi|119402867|gb|EAW13288.1| beta-lactamase, putative [Aspergillus clavatus NRRL 1]
Length = 434
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 81/302 (26%), Positives = 126/302 (41%), Gaps = 66/302 (21%)
Query: 46 LQTEAGLVYDLASVSKVVGVGTVCTFLWEI--GQLDIDRLVIDFLPE---SDYPDITIRQ 100
L +YDLAS++K+ T L +I G L ++ V +LP IT+
Sbjct: 108 LPARTNTIYDLASLTKLF---TTIAALRQIDAGSLALNATVASYLPGFAVHGKESITVLM 164
Query: 101 LLTHATDL--DPFIPNRDLL--TAPELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILER 154
LLTH + DP P D + T E K ++ + ++ P +LYSD++F+ L +LE
Sbjct: 165 LLTHTSGFAPDPEPPLYDSVYRTVAERKASILDQSLQNSPGSTYLYSDLNFMSLALVLEH 224
Query: 155 IFNQDLDVILKDQVWKPWGMTET----------KFGPV------ELAVPTVRGVEA---- 194
I +++LD ++ P GM +T F P E + + +E
Sbjct: 225 ITHKNLDELVYGFT-HPLGMHDTFFNRGNVDGAAFAPYARMAAEEFQIQVLGSMEPKRPQ 283
Query: 195 ---GIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL---------------ADDFARD 236
G VHD A L +G AGLFST++D I + L D +
Sbjct: 284 PVRGTVHDENAWALDGVSGHAGLFSTVEDTAILCQMILNNGTYGGHRILSPEVVDLIFHN 343
Query: 237 LNQNFSPLDDKERSLAWNLEGDWL----------DHTGYTGTFIMWNRQKQEATIFLSNR 286
N+ F P D E L + L + HTG+TGT ++ +R + +NR
Sbjct: 344 FNERF-PGD--EHGLGFELNQYYTAGPMASLQTAGHTGFTGTTLVIDRPSNTFFLLFANR 400
Query: 287 TY 288
+
Sbjct: 401 VH 402
>gi|75178030|ref|ZP_00698089.1| COG1680: Beta-lactamase class C and other penicillin binding
proteins [Shigella boydii BS512]
Length = 248
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 46/196 (23%)
Query: 139 LYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPV-------ELAVPTVRG 191
+YSDV ++LLGFI+E + Q LD +++ +++P G+T T F P+ ++A + G
Sbjct: 16 IYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNG 75
Query: 192 -VEAGIVHDPKARL---------------LGRHAGSAGLFSTIKDLQIFLEHYL------ 229
G++H P R +G +G AGLFS D+ + ++ L
Sbjct: 76 NTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYG 135
Query: 230 -ADDFARDLNQNF--SPLDDKERSLAWNLEGD--------------WLDHTGYTGTFIMW 272
F+ + + F S +D L W + G+ HTG+TGT +
Sbjct: 136 DVQLFSAETVKMFTTSSKEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVI 195
Query: 273 NRQKQEATIFLSNRTY 288
+ A + LSN+ +
Sbjct: 196 DPVNHMAIVMLSNKPH 211
>gi|153806098|ref|ZP_01958766.1| hypothetical protein BACCAC_00349 [Bacteroides caccae ATCC 43185]
gi|149130775|gb|EDM21981.1| hypothetical protein BACCAC_00349 [Bacteroides caccae ATCC 43185]
Length = 1003
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 35/189 (18%)
Query: 135 QPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPV-ELAVPTV---- 189
Q ++YSD+ F+LLG ++E++ ++V L+ + ++P G+ T + P+ LA V
Sbjct: 787 QKRYVYSDIGFILLGMLVEQLAGMPMEVYLQSEFYEPLGLERTGYLPLRRLAKSEVIPSN 846
Query: 190 ------RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDL----QIFL-------EHYLADD 232
+ G VHD + G AG+AGLFST +++ Q+ L YL+ +
Sbjct: 847 NDRFLRKDTLQGFVHDEASAFFGGLAGNAGLFSTAREVARVYQMLLNGGEIDGRRYLSKE 906
Query: 233 FARDLNQNFSPL-------------DDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEA 279
+ + S + D K+ + A + + HTG+TGT + +
Sbjct: 907 TCQLFTTSVSKISRRGLGFDKPDREDSKKGNCAPDAPAEVYGHTGFTGTCAWVDPVNELV 966
Query: 280 TIFLSNRTY 288
+FLSNR Y
Sbjct: 967 YVFLSNRIY 975
>gi|56807536|ref|ZP_00365462.1| COG1680: Beta-lactamase class C and other penicillin binding
proteins [Streptococcus pyogenes M49 591]
Length = 78
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 6 IIKKIEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGV 65
+IK IE + +Y GAS A F+ +W E+++G D + +A LVYDLASVSKVVGV
Sbjct: 9 VIKCIENHLHKKVYKGASLALFQSGRWQEYHIGTIDGRRPV--DANLVYDLASVSKVVGV 66
Query: 66 GTVCTFLWEIG 76
T+C L G
Sbjct: 67 ATICNILLNNG 77
>gi|53711857|ref|YP_097849.1| beta-N-acetylglucosaminidase [Bacteroides fragilis YCH46]
gi|52214722|dbj|BAD47315.1| beta-N-acetylglucosaminidase [Bacteroides fragilis YCH46]
Length = 996
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 38/196 (19%)
Query: 126 AMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVEL- 184
A L+R+ F+YSD+ F+LL ++E + + LDV L + ++P G+ T F P+
Sbjct: 773 AQSELDRKR---FVYSDIGFILLQQVVEAVTGKTLDVYLVSEFYRPMGLEHTLFQPLNRY 829
Query: 185 ----AVPTV------RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDL----QIFL----- 225
+PT R G VHD A +G +G+AGLFST ++L Q+ L
Sbjct: 830 KKADIMPTAANDYLRRQDLCGYVHDEAAAFMGGVSGNAGLFSTAQELGKIYQMILNEGEL 889
Query: 226 --EHYLADDFARDLNQNFSPL-------------DDKERSLAWNLEGDWLDHTGYTGTFI 270
+ YL + R S + D K + A + HTG+TGT
Sbjct: 890 DGKRYLRPETCRIFTTEKSAVSHRGLGYDKPNLKDPKANACASSAPASVYGHTGFTGTCA 949
Query: 271 MWNRQKQEATIFLSNR 286
+ + IFLSNR
Sbjct: 950 WVDPENDLVYIFLSNR 965
>gi|126434282|ref|YP_001069973.1| beta-lactamase [Mycobacterium sp. JLS]
gi|126234082|gb|ABN97482.1| beta-lactamase [Mycobacterium sp. JLS]
Length = 531
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 72/246 (29%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPD------ITIRQLLTHAT 106
++DLAS++K + T L+E G++ D V +LP+ + +T+R LLTH +
Sbjct: 137 IFDLASLTKCLATATAVMQLYEQGKVAFDDPVQKYLPDFNRAGDPQRARVTVRMLLTHTS 196
Query: 107 DLDPFIPNRDLLTAPELKEAMFHLNRR--------SQPA--FLYSDVHFLLLGFILERIF 156
+P+ +L A L+ A R S P + YSD++++LLG ++E++
Sbjct: 197 GE---VPDVNLDDAWGLRRAEKGEGLRRALTSPLLSDPGEVYRYSDINYILLGALIEKVT 253
Query: 157 NQDLDVILKDQVWKPWGMTETKFGPVELA------------------------------- 185
+ D + ++ P GM +T++ P A
Sbjct: 254 GEAEDTYAERNIFSPLGMGDTRYLPPAEACGPRRMRGTAIGWAAAPHDGVPAVCPAGTWN 313
Query: 186 -------VPTVRGVEA---------------GIVHDPKARLLGRHAGSAGLFSTIKDLQI 223
PT E G VHD AR +G AG AG+FST +D+ I
Sbjct: 314 TSLFTRIAPTAHDDEGRRDPRTNPDWDQLLRGAVHDTTARRMGGVAGHAGVFSTARDVGI 373
Query: 224 FLEHYL 229
+ + L
Sbjct: 374 YAQALL 379
>gi|150024851|ref|YP_001295677.1| Probable beta-N-acetylglucosaminidase precursor [Flavobacterium
psychrophilum JIP02/86]
gi|149771392|emb|CAL42861.1| Probable beta-N-acetylglucosaminidase precursor [Flavobacterium
psychrophilum JIP02/86]
Length = 1001
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 84/383 (21%), Positives = 153/383 (39%), Gaps = 78/383 (20%)
Query: 4 TKIIKKIE----EQIEAGIYPGASFAYFKDNQWT-EFYLGQSDPEHGLQTEAGLVYDLAS 58
++I+ KI+ + I+ + PGA K + + G ++ + + +YD+AS
Sbjct: 612 SEILSKIDAIAKKAIDGKMTPGAQILVAKKGKVVYQKSFGYHTYKNETKVKNSDIYDVAS 671
Query: 59 VSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIP-N 114
++K+V ++ ++++ + +PE ++ I+ + LL+H L +IP
Sbjct: 672 LTKIVSTLPNVMLEYDAKKINLATTLGTMIPEARGTNKDSISFKDLLSHYARLQAWIPFY 731
Query: 115 RDLLTAPELKEAMFHLNRRSQ--------------------------------PAFLYSD 142
+ L + ++ ++ N S+ + YSD
Sbjct: 732 KSTLDSNKIPLKKYYNNTYSENFKNQVSENLFIRNDYNDTIIKKIISSKLLDKKEYKYSD 791
Query: 143 VHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGP-----VELAVPTV------RG 191
F+LL LE+ NQ LDV+ ++ + GM T + P + + PT
Sbjct: 792 FTFILLKEYLEKSNNQTLDVLSQENFFSKLGMNNTLYNPLRKFDISVIPPTEVDTYFRHQ 851
Query: 192 VEAGIVHDPKARLLGRHAGSAGLFSTIKD----LQIFLE-------HYLADDFARDLNQN 240
+ G VHD A + G G AG+FS D +Q++L+ Y ++ D N
Sbjct: 852 IIQGYVHDMGAAMQGGVGGHAGIFSNTIDIAKMMQMYLQKGNYGGIQYFSEQTFNDFNTC 911
Query: 241 FSPLDDKERSLAWN---LEGDW-----------LDHTGYTGTFIMWNRQKQEATIFLSNR 286
+ R L + L G HTG+TGT + + + +FLSNR
Sbjct: 912 YFCAQGNRRGLGLDKPQLSGTSGPTCGCASLTSFGHTGFTGTMAWVDPETEIVYVFLSNR 971
Query: 287 TYEKDERAQWILDRNQVMNLIRK 309
T+ D A L + + I+K
Sbjct: 972 TF-PDSNASNKLSKENIREDIQK 993
>gi|86134048|ref|ZP_01052630.1| beta-N-acetylglucosaminidase [Tenacibaculum sp. MED152]
gi|85820911|gb|EAQ42058.1| beta-N-acetylglucosaminidase [Polaribacter dokdonensis MED152]
Length = 979
Score = 65.9 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 69/309 (22%), Positives = 128/309 (41%), Gaps = 73/309 (23%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLD 109
VYDLAS++K++ + E ++ + + + LP ++ D++++++L+H L
Sbjct: 644 VYDLASLTKILASLPLIMKAEEEEKIPLSASLQEILPSFKNTNKADVSVKEILSHIARLK 703
Query: 110 PFIP------------------------NRDLLTAPEL------KEAMF----HLNRRSQ 135
+IP N D+ A L K++++ + +R +
Sbjct: 704 AWIPFYKATQDSTTGLNSEEFYSRRKTKNYDVKVAENLYLKHSYKDSIYKFIKEVEQRDR 763
Query: 136 PAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVEL-----AVPTVR 190
+ YSD+ + L LE +++ L+ ++ ++ + G + P++ +PT +
Sbjct: 764 EGYKYSDLGYYLFKEALEDKYDKPLNKLVDEEFYASLGADRMTYLPLKKFYKSEIIPTEK 823
Query: 191 G------VEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDF----------- 233
V G VHD A +LG AG AGLFS D+ ++ YL F
Sbjct: 824 DDYYRNQVIHGNVHDMGAAMLGGVAGHAGLFSNANDVAKVMQMYLQKGFYGGRRYLKSET 883
Query: 234 --------------ARDLNQNFSPLDDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEA 279
R L + L+ K + + + H+G+TGT+ + Q
Sbjct: 884 IDKFNTRYYEDKKVRRGLGFDKPQLNPKVEATCGCVSDESFGHSGFTGTYTWADPQSGIV 943
Query: 280 TIFLSNRTY 288
+FLSNRTY
Sbjct: 944 YVFLSNRTY 952
>gi|156111018|gb|EDO12763.1| hypothetical protein BACOVA_01577 [Bacteroides ovatus ATCC 8483]
Length = 1003
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 35/189 (18%)
Query: 135 QPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVEL-----AVPTV 189
Q ++YSDV F+LLG ++E++ ++ L+ + ++P G+ T + P+ VP+
Sbjct: 787 QKRYVYSDVGFILLGMLVEQLAGMPMEAYLQREFYEPMGLEHTGYLPLRRFAKSEIVPSN 846
Query: 190 RG------VEAGIVHDPKARLLGRHAGSAGLFSTIKDL----QIFL-------EHYLADD 232
+ G VHD + G AG+AGLFST +D+ Q+ L + YL+ +
Sbjct: 847 KDRFLRKETLLGFVHDEASAFFGGLAGNAGLFSTARDVARVYQMLLNGGEIDGQRYLSKE 906
Query: 233 FARDLNQNFSPL-------------DDKERSLAWNLEGDWLDHTGYTGTFIMWNRQKQEA 279
+ S + D K+ + A + HTG+TGT + +
Sbjct: 907 TCQLFTTETSKISRRGLGFDKPDADDSKKGNCAPAAPAEVYGHTGFTGTCAWVDPVNELV 966
Query: 280 TIFLSNRTY 288
+FLSNR Y
Sbjct: 967 YVFLSNRIY 975
>gi|108757137|ref|YP_630155.1| beta-lactamase [Myxococcus xanthus DK 1622]
gi|108461017|gb|ABF86202.1| beta-lactamase [Myxococcus xanthus DK 1622]
Length = 393
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/219 (28%), Positives = 91/219 (41%), Gaps = 48/219 (21%)
Query: 54 YDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPD--ITIRQLLTHATDLDPF 111
+DLAS++KV+ ++ LW G++ + LV + P + D +T+ LL H + L PF
Sbjct: 52 FDLASLTKVISTTSLFLRLWTEGKVGPETLVSRYFPGTPVGDAGVTVADLLYHRSGLPPF 111
Query: 112 IP--NRDLLTAPELKEAMFHLNRRS-----------------QPAFL--YSDVHFLLLGF 150
+P + L PEL +A R+ +P L YSDV F+LLG
Sbjct: 112 VPFFAQALTAHPELLDADCPSALRARVRDEVIQAAAATPLAAEPQTLAAYSDVGFILLGE 171
Query: 151 ILERIFNQDLDVILKDQVWKPWGMTE-----TKFGPVELAVPT----------------- 188
IL R LD + V +P G++ T F + PT
Sbjct: 172 ILSRAAGAPLDTLFSRHVAEPLGLSARFHRLTDFPADAMPAPTGATRPREPAPGQETLWK 231
Query: 189 ---VRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIF 224
+ G V D A ++ AG AGLF T D+ F
Sbjct: 232 DVPTQPTRLGEVDDDNAWVMDGVAGHAGLFGTAVDVARF 270
>gi|56963167|ref|YP_174895.1| penicillin-binding protein 4 [Bacillus clausii KSM-K16]
gi|56909407|dbj|BAD63934.1| penicillin-binding protein 4 [Bacillus clausii KSM-K16]
Length = 461
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 85/157 (54%), Gaps = 19/157 (12%)
Query: 34 EFYLGQSDPEHGLQTEAGLVYDLASVSK-VVGVGTVCTFLWEIGQLDIDRLVIDFLPESD 92
E+Y G + L T++ +++LASVSK + +G + L ++GQL D L+ +++PE
Sbjct: 45 EYYDGSA---RDLTTDS--MFELASVSKPITALGII--RLQQLGQLHCDDLIANWIPELP 97
Query: 93 YPDITIRQLLTHATDLDPFI---PNRDLLTAPELKEAMFHLNRRSQP--------AFLYS 141
YP ITIR LL H + L ++ N T E + + + QP +++YS
Sbjct: 98 YPGITIRHLLNHTSGLPDYMELFANVWDPTRYARNEDVLQMLIKHQPDPLFAPNDSWMYS 157
Query: 142 DVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETK 178
+ +++L ++E+I + L +Q+++P GMT T+
Sbjct: 158 NTGYIMLAILIEKISGKRYGDFLDEQIFQPLGMTRTQ 194
>gi|110599517|ref|ZP_01387754.1| Beta-lactamase [Geobacter sp. FRC-32]
gi|110549725|gb|EAT62914.1| Beta-lactamase [Geobacter sp. FRC-32]
Length = 603
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 23/227 (10%)
Query: 21 GASFAYFKDNQ--WTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQL 78
G S A D + W E + G +D + + VY S+SK+ T L E G+L
Sbjct: 62 GLSIALVDDQKVVWAEGF-GYADKANEIPATPSTVYRAGSISKLF-TATAAMQLVEQGKL 119
Query: 79 DIDRLVIDFLPE----SDYPD---ITIRQLLTHATDLDPFIPNRDLLTAPELKEAMFHLN 131
+ID+ + +LPE S +PD IT R ++TH + L + PE E
Sbjct: 120 NIDKPLSTYLPEFSINSRFPDASPITPRTIMTHHSGLPSDLAKGMWTKNPEPFENNLDRL 179
Query: 132 RRSQPA------FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF--GPVE 183
+ A F YS+V +LG LE + +D + + KP GM+ + F GP
Sbjct: 180 KYEYAAYPPDFVFSYSNVGVTVLGHALENVAGRDFAAHMDASILKPLGMSHSGFSLGPDR 239
Query: 184 LAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLA 230
TV G +A L R + GL +T+ DL F+E A
Sbjct: 240 ----TVNGAKAYRKGREAEELPLRDVPAGGLNTTVLDLSRFMEMIFA 282
>gi|60680085|ref|YP_210229.1| possible beta-N-acetylglucosaminidase/beta-lactamase fusion protein
[Bacteroides fragilis NCTC 9343]
gi|60491519|emb|CAH06271.1| possible beta-N-acetylglucosaminidase/beta-lactamase fusion protein
[Bacteroides fragilis NCTC 9343]
Length = 996
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 38/196 (19%)
Query: 126 AMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVEL- 184
A L+R+ F+YSD+ F+LL ++E + + LD L + ++P G+ T F P+
Sbjct: 773 AQSELDRKR---FVYSDIGFILLQQVVEAVTGKTLDAYLVSEFYRPMGLEHTLFQPLNRY 829
Query: 185 ----AVPTV------RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDL----QIFL----- 225
+PT R G V+D A +G +G+AGLFST ++L Q+ L
Sbjct: 830 KKADIMPTAANDYLRRQDLCGYVYDEAAAFMGGVSGNAGLFSTAQELGKIYQMILNEGEL 889
Query: 226 --EHYLADDFARDLNQNFSPL-------------DDKERSLAWNLEGDWLDHTGYTGTFI 270
+ YL + R S + D K + A + HTG+TGT
Sbjct: 890 DGKRYLRPETCRIFTTEKSAVSHRGLGYDKPNLKDPKANACASSAPASVYGHTGFTGTCA 949
Query: 271 MWNRQKQEATIFLSNR 286
+ + IFLSNR
Sbjct: 950 WVDPENDLVYIFLSNR 965
>gi|83859454|ref|ZP_00952975.1| similar to penicillin-binding protein [Oceanicaulis alexandrii
HTCC2633]
gi|83852901|gb|EAP90754.1| similar to penicillin-binding protein [Oceanicaulis alexandrii
HTCC2633]
Length = 370
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 85/315 (26%), Positives = 133/315 (42%), Gaps = 56/315 (17%)
Query: 14 IEAGIYPGASFAYFKDNQWTEFYLGQ---SDPEHGLQTEAGLVYDLASVSKVVGVGTVCT 70
+EAG +P A +Q ++G+ + EH A V++LAS++K + V +
Sbjct: 37 MEAGRFPAVVVAVL--DQGAPVHVGEYGFASLEHAAPARADSVFELASLTKHMTALMVLS 94
Query: 71 FLWEIGQLDID----RLVIDFLPESDYPDITIRQLLTHATDLDPFI---PNRDLLTAPEL 123
L E G L +D R V D PE+ + ITI QLL+H L P+ + A
Sbjct: 95 -LAEEGHLSLDDPLSRYVED-TPEA-WSAITINQLLSHMAGLAHRFEARPDGEFQIAYST 151
Query: 124 KEAMFHLNRRSQPA-------FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTE 176
++ + + RS P + YSD + LLG ++E + Q + L+ + W P GM++
Sbjct: 152 EDML--ASARSTPMESEPGTDWGYSDQGYFLLGLVIEEVTRQSFEAALRQRFWAPLGMSQ 209
Query: 177 TKFGPVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGL------FSTIKDLQIFLEHYLA 230
T+ VP R G+ AR R GL S+++DL I+ E L
Sbjct: 210 TRMLDQSAIVPH-RAEGYGVYEGELAR--NRRVWQFGLTSHFGVTSSLQDLMIW-EAELD 265
Query: 231 DD---------FARDLNQNFSPLDDKERSLAWNLEGDW----------LDHTGYTGTFIM 271
D A ++ + F D ER W W H GY+GT +
Sbjct: 266 DPQVLDPDVIVQAAEIQRAFDAGDSCER---WGYARGWWSHDVNGHQITSHAGYSGTAYV 322
Query: 272 WNRQKQEATIFLSNR 286
+ ++ I L+NR
Sbjct: 323 RDMTSGQSVIVLTNR 337
>gi|88806869|ref|ZP_01122385.1| D-alanyl-D-alanine carboxypeptidase [Robiginitalea biformata
HTCC2501]
gi|88783203|gb|EAR14376.1| D-alanyl-D-alanine carboxypeptidase [Robiginitalea biformata
HTCC2501]
Length = 362
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 64/232 (27%), Positives = 94/232 (40%), Gaps = 25/232 (10%)
Query: 15 EAGIYPGASFAYFKDNQWT-EFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLW 73
E G PG + QW E G +D E G+ ++ +ASVSK + +
Sbjct: 39 EGGRVPGLAMRIQHRGQWVHEAAFGYADLEGGVPATPQTLFRIASVSKPITATALARMAG 98
Query: 74 EIGQLDIDRLVIDFLPESDYPD--ITIRQLLTHATDLDPFIPNRDLLTAPELKEAMFHLN 131
E G L +D + ++PE YPD I + QL H L + L P EA +
Sbjct: 99 E-GLLRLDDPLARYVPE--YPDHGILLHQLAAHTAGLRGYRGKEYALNRPYSIEASLEVF 155
Query: 132 RRSQ------PAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG----- 180
R FLY+ F+LL +ER D ++++ V +P GM T+
Sbjct: 156 RDDPLEFAPGTGFLYNSFDFVLLSLAMERAAGMPFDALVRELVLQPLGMEHTQAEQPEQL 215
Query: 181 PVELAVPTVR---GVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL 229
P LA P R G + D + +L G G ST+ D+ + YL
Sbjct: 216 PDGLAKPYTRRAGGFRRAVPVDNRYKLAG-----GGYLSTVGDVCRLGQAYL 262
>gi|13476034|ref|NP_107604.1| probable esterase [Mesorhizobium loti MAFF303099]
gi|14026794|dbj|BAB53390.1| probable esterase [Mesorhizobium loti MAFF303099]
Length = 308
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 78/261 (29%), Positives = 110/261 (42%), Gaps = 36/261 (13%)
Query: 54 YDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPD-------ITIRQLLTHAT 106
+DLAS++KV+ L E G +D+D +I LP+ D +T RQ L H T
Sbjct: 34 FDLASLTKVIFTTPRILALAEDGVIDLDAPLISVLPDLRQYDQWAWERKVTFRQCLAHQT 93
Query: 107 DLDPFIPNRDLLTAPELKEAMFHLNRR---SQPAFLYSDVHFLLLGFILERIFNQ---DL 160
P PEL A F L R +P +YSD++F+LLGF LER+ + D+
Sbjct: 94 PFPAVEPIYTYGRDPELLRA-FILQREWRAREP--VYSDINFILLGFALERLSGKTIRDM 150
Query: 161 DVILKDQVWKPWGMTETKFGPVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKD 220
D W E R V +G VHD L + AG AGLF T
Sbjct: 151 D----PGAGFAWSTAPDIAAATEDCTWRHR-VLSGEVHDDNCSAL-QGAGHAGLFGTAAS 204
Query: 221 LQIFLEHYLADDFA--RDLNQNFSPLDDKERSLAWNLEGD-W----------LDHTGYTG 267
+ F ++ L A R + +PL R+ W D W + HTG+TG
Sbjct: 205 VLDFAQNLLTGTGASERSIALMRAPL-SATRTHGWECPYDGWSGGALCSPGTIGHTGFTG 263
Query: 268 TFIMWNRQKQEATIFLSNRTY 288
T + + + L+NR +
Sbjct: 264 TGLWIDFDSGKVWTLLTNRIH 284
>gi|126663658|ref|ZP_01734654.1| b-glycosidase, glycoside hydrolase family 3 protein [Flavobacteria
bacterium BAL38]
gi|126624241|gb|EAZ94933.1| b-glycosidase, glycoside hydrolase family 3 protein [Flavobacteria
bacterium BAL38]
Length = 971
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 74/328 (22%), Positives = 127/328 (38%), Gaps = 72/328 (21%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLP---ESDYPDITIRQLLTHATDLD 109
VYD+AS++K+V ++ G L +D + LP S+ + T+ +LTH
Sbjct: 637 VYDIASLTKIVATLPNIMQEFDQGHLTLDTKLKTMLPASKNSNKANATVLDMLTHQARFQ 696
Query: 110 PFIP----NRDLLTAPE-----------------------------LKEAMFHLNRRSQP 136
P+IP D L P + + + +
Sbjct: 697 PWIPFYKATLDSLNRPSTHFYRSEFSDEFPIHVADNLFLKKGYNDTIIKTIIESELLPKK 756
Query: 137 AFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELA-----VPTVRG 191
+ YSD F+L LE + L+ + + ++P G + + P+ +PT
Sbjct: 757 QYKYSDFTFILFKEYLELHHKKSLEYLAQTNFYEPLGASSIMYNPLRKMNANRIIPTEND 816
Query: 192 ------VEAGIVHDPKARLLGRHAGSAGLFSTIKD----LQIFLEH-------YLADDFA 234
+ G VHD A + G +G AGLF+ D +Q++L+ Y+ ++
Sbjct: 817 TYFRHQLVQGYVHDMAAAMQGGISGHAGLFANALDVAKIMQMYLQKGTYGGRTYITENTF 876
Query: 235 RDLNQNFSPLDDKERSLAWNL-----EG--------DWLDHTGYTGTFIMWNRQKQEATI 281
N + + R + ++ EG HTG+TGT + +K+ +
Sbjct: 877 NKFNTCYFCKEGNRRGVGFDKPQLGNEGPTCGCVSLTSFGHTGFTGTMTWADPEKEIVYV 936
Query: 282 FLSNRTYEKDERAQWILDRNQVMNLIRK 309
FLSNRTY D A L + + I+K
Sbjct: 937 FLSNRTY-PDSNASNKLSKENIRENIQK 963
>gi|118743677|ref|ZP_01591679.1| beta-lactamase [Geobacter lovleyi SZ]
gi|118683420|gb|EAV89817.1| beta-lactamase [Geobacter lovleyi SZ]
Length = 601
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 21/238 (8%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ--WTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGT 67
I +++ G S A D Q W E + G +D L A VY + SVSK+ T
Sbjct: 51 IRKEMSKNNVQGLSIALVDDQQVVWAEGF-GYADTAARLPATADTVYRIGSVSKLF-TST 108
Query: 68 VCTFLWEIGQLDIDRLVIDFLPE-------SDYPDITIRQLLTHATDLDPFIPNRDLLTA 120
L E G+LD+D + ++P+ S+ IT+R ++TH + +
Sbjct: 109 AAMQLVEQGRLDLDAPLATYIPDFSLRSRFSNAKPITLRSIMTHHSGIPSDYAKGMWTRQ 168
Query: 121 PELKEAMFHLNRRSQPAF------LYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGM 174
P+ ++ L R AF YS++ LLG ++ + Q+ ++ + P GM
Sbjct: 169 PQPISSLPALIRDEYAAFPPDTFLSYSNLGMSLLGLAVQNVSGQEFAGYMQQALLSPLGM 228
Query: 175 TETKFGP-VELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLAD 231
+ F P + A P R +G P+ L R + GL +++ D+ F+ LA+
Sbjct: 229 QHSAFSPGIGSAAPAARAY-SGSDEKPEPPL--RDMPAGGLNASVNDMSRFIRMILAE 283
>gi|154497153|ref|ZP_02035849.1| hypothetical protein BACCAP_01446 [Bacteroides capillosus ATCC
29799]
gi|150273552|gb|EDN00680.1| hypothetical protein BACCAP_01446 [Bacteroides capillosus ATCC
29799]
Length = 1653
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 83/330 (25%), Positives = 128/330 (38%), Gaps = 99/330 (30%)
Query: 53 VYDLASVSKVVGVGTVCTFLWEIG----QLDIDRLVIDFLPESD---------------- 92
+YDLAS +K+ V ++ G + +D + F PE D
Sbjct: 307 LYDLASNTKMYSVNYALQYMLTQGTDVYDISLDDPITKFFPEFDDEGKTIFKEGTSEEDK 366
Query: 93 ------YPDITIRQLLTHAT--DLDPFIPN---RDLLTAPE--LKEAMFHLNRRS----- 134
++T+R +L H D DP N + PE + +F +R +
Sbjct: 367 AQILQWKSELTVRDILMHQAGFDPDPQYHNDQFNQVTQKPEQGVDNPLFSQDRETTLTKV 426
Query: 135 -------QPAF--LYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPV--- 182
+P +YSDV ++LL FI+E++ LD LK+ W P G+T + P+
Sbjct: 427 LASPLTYEPGTKTVYSDVDYMLLCFIIEQVTGMGLDQFLKETFWDPMGLTHITYNPLDNG 486
Query: 183 ---------ELAVPTVRGVEA----------GIVHDPKARL-LGRHAGSAGLFSTIKDLQ 222
EL T GV + G VHD KA +G +G AG+FS +DL
Sbjct: 487 FTADDCAATELNGNTRDGVISFKNVRTDTVQGEVHDEKAYYAMGGVSGHAGMFSNAEDLA 546
Query: 223 IFLEHYLADDFARDLNQNFSP--LDD--KERSL---AWNLEGDW---------------- 259
L + NQ FS +D+ K +SL W L G W
Sbjct: 547 KLASVMLTGGYGG--NQFFSKNIMDEFTKPKSLNYPTWGL-GWWRQAELGRSSYFSIQSS 603
Query: 260 ---LDHTGYTGTFIMWNRQKQEATIFLSNR 286
+ H G+TGT + + + + L+N+
Sbjct: 604 NSTIGHQGWTGTLTVIDPENDLVVVLLTNK 633
>gi|1256134|dbj|BAA19501.1| YbbE [Bacillus subtilis]
Length = 308
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 71/291 (24%), Positives = 118/291 (40%), Gaps = 56/291 (19%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQ--------WTEFYLGQSDPEHGLQTEAGLVYDLASVSK 61
IE I AG +PGA KD + +++ Y G + + ++DLAS +K
Sbjct: 2 IERDIAAG-FPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTK 60
Query: 62 VVGVGTVCTFLWEIGQLDIDRLVIDFLPE-SDYPDITI----RQLLTHATDLDPFIPNRD 116
+ L G+LD+ V +LP D P I R + ++ + +P+
Sbjct: 61 MYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKTRYVSLMSSSTNSGLPSSF 120
Query: 117 LLTAPELKEAMFHLNRRSQPAFL--------------YSDVHFLLLGFILERIFNQDLDV 162
PE + R +L YSD+ ++LLG I+E++ + LDV
Sbjct: 121 YFYTPEKAGKYYSQERDKTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDV 180
Query: 163 ILKDQVWKPWGMTETKFGPVE---------------------LAVPTVR-GVEAGIVHDP 200
+ +++KP + T + P++ + P +R G VHD
Sbjct: 181 YTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEVHDE 240
Query: 201 KARL-LGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLDDKERS 250
KA + +G AGLFS D+ I L+ L R+++ L D+E S
Sbjct: 241 KAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNIS-----LFDQENS 286
>gi|53686966|ref|ZP_00106589.2| COG1680: Beta-lactamase class C and other penicillin binding
proteins [Nostoc punctiforme PCC 73102]
Length = 376
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 54 YDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYP------DITIRQLLTHATD 107
+ +AS+SK + V L E ++++DR + +LP P IT+RQLL H +
Sbjct: 88 FSIASMSKTF-MSVVVLKLVEQRKIELDRAIATYLPRDITPHIVNSDKITVRQLLNHTSG 146
Query: 108 LDPFIPNRDLL------------TAPELKEAMFHLNRRSQPA--FLYSDVHFLLLGFILE 153
+ ++ ++ + TA E + M+ ++ P F+Y+D +++LL I+E
Sbjct: 147 VAEYLDTKEFIQATAKRSRSQPWTAREAIQYMYQEQPQANPGEKFIYTDCNYILLELIVE 206
Query: 154 RIFNQDLDVILKDQVWKPWGMTETKFGPVELAVPTVRGVEAG 195
+ + L ++ Q+ KP G+ T EL PT+ V G
Sbjct: 207 NLTRETLAQAIRSQILKPLGLKHTF---TELREPTIGEVATG 245
>gi|126646070|ref|ZP_01718587.1| beta-lactamase family protein [Algoriphagus sp. PR1]
gi|126577702|gb|EAZ81922.1| beta-lactamase family protein [Algoriphagus sp. PR1]
Length = 438
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 37 LGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPD- 95
LG D E G++ E + + S++K+ V + E G+L +D+ + +F+PE + D
Sbjct: 58 LGFKDIEEGVKLEEDTQFRVGSITKMFTTVLVLQAVEE-GKLKLDQKLSEFIPEIENSDQ 116
Query: 96 ITIRQLLTHATDLDPFIPNRDL----LTAPELKEAMFHLNRRSQPAFL------YSDVHF 145
ITI LL H + + F N DL T+P+ +E + + + F YS+ +F
Sbjct: 117 ITISMLLQHRSGIHNFT-NDDLYDTYFTSPQTREQLIEIIKEGGSDFEPDTKGEYSNSNF 175
Query: 146 LLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
+LL FILE ++++ ++K+++ KP + T G
Sbjct: 176 VLLTFILEGVYDESYRELVKERITKPLRLEHTLVG 210
>gi|87307867|ref|ZP_01090010.1| Putative beta-lactamase [Blastopirellula marina DSM 3645]
gi|87289481|gb|EAQ81372.1| Putative beta-lactamase [Blastopirellula marina DSM 3645]
Length = 365
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 68/262 (25%), Positives = 108/262 (41%), Gaps = 53/262 (20%)
Query: 56 LASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFI 112
L S++K + V + + L + G+ +D V+ +LPE IT+RQLLTH + L +
Sbjct: 74 LGSITKPIAVTAIMSLL-DAGEFKLDDRVVKYLPEFQGDGREAITMRQLLTHISGLPDQL 132
Query: 113 PNRDLLTAPELKEAMFHLNRRSQP-------AFLYSDVHFLLLGFILERIFNQDLDVILK 165
P + A + + F P + YS + LL + +RI Q + +++
Sbjct: 133 PQNAKMRAAQATLSKFSAAAIRTPLLFKPGSKYSYSSMAILLASEVAQRITKQPIAMLVD 192
Query: 166 DQVWKPWGMTETKFG------------PVELAVPTVRGVEAGIVHDPKARL------LGR 207
V +P + T G VE A P E+G DP + R
Sbjct: 193 QLVIQPLQLHHTALGIGRLEKDSLMRCQVEHAAP-----ESG-AGDPTTKTWDWNSDFWR 246
Query: 208 HAGS--AGLFSTIKDLQIFLEHY-------LADDFARDLNQNFSPLDDKERSLAWNLEGD 258
G+ G F++ D+ FL + L + AR + +N +PL K R L ++L D
Sbjct: 247 RLGAPWGGAFASAGDVAKFLNAFLHPQGKMLKPETARMMIRNHNPLQMKARGLGFDLGSD 306
Query: 259 W--------LDHTGYTGTFIMW 272
H+G TGT I W
Sbjct: 307 LNGPVCDNVFGHSGSTGT-ICW 327
>gi|149917387|ref|ZP_01905885.1| D-alanyl-D-alanine carboxypeptidease, putative [Plesiocystis
pacifica SIR-1]
gi|149821724|gb|EDM81120.1| D-alanyl-D-alanine carboxypeptidease, putative [Plesiocystis
pacifica SIR-1]
Length = 375
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 54/250 (21%)
Query: 14 IEAGIYPGASFAYFKDNQWT-EFYLGQSD--PEHGLQTEAGLVYDLASVSKVVGVGTVCT 70
+ G+ PG + A +++ + ++G D PE T A YDLAS++K++ T+
Sbjct: 15 VAEGVTPGCAAAVWREGELRLRSFVGCLDGAPESAPVT-ADTAYDLASLTKILSTTTLTA 73
Query: 71 FLWEIGQLDIDRLVIDFLPES------DYPDITIRQLLTHATDLDP----FIPNRDLLTA 120
+ G L +D D LPE+ P + R LL HA L+ F P L
Sbjct: 74 QAIDAGALRLD----DRLPEALAVVGGFRPQL--RDLLEHAAGLEAHREFFAPPWSL--G 125
Query: 121 PELKEAMFHLNRRSQPA------FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGM 174
P +EA R PA +Y+D+ F LLG LER LD + +++ +P G+
Sbjct: 126 PGQREAFLDAVRGVAPACPPRARAIYTDLGFALLGAWLERALGARLDALFAERIAEPLGL 185
Query: 175 T-ETKFGPVE------LAVPTVRGVE-------------------AGIVHDPKARLLGRH 208
+ F P++ L P + G+VHD ++
Sbjct: 186 AGQIGFRPLDRSYDDALTFPVTEAYDRGEPQTWWPIRARVGQAAARGVVHDDNCVVMHGV 245
Query: 209 AGSAGLFSTI 218
AG AGLF T+
Sbjct: 246 AGHAGLFGTL 255
>gi|115374626|ref|ZP_01461905.1| beta-lactamase [Stigmatella aurantiaca DW4/3-1]
gi|115368392|gb|EAU67348.1| beta-lactamase [Stigmatella aurantiaca DW4/3-1]
Length = 392
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 55/263 (20%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVC 69
+EE +E ++P A ++ + + G + G +DLAS++KV+ +
Sbjct: 11 LEEAVELKVFPAAQAVVL--HRGVQVFGGVAGAATG-----DTRFDLASLTKVLCTAPLF 63
Query: 70 TFLWEIGQLDIDRLVIDFLPESDYPDI--TIRQLLTHATDLDPFIP--NRDLLTAPEL-- 123
LW G+L + V F P S + T+ LL H + L PF+P + L + PEL
Sbjct: 64 LRLWTDGKLGPETRVERFFPGSPVGEAGATVADLLYHRSGLPPFVPFFAQALTSTPELLD 123
Query: 124 -----------KEAMFH------LNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKD 166
+EA+ L + YSDV F+LLG IL R L+++
Sbjct: 124 PACPPSVRARAREALVQAAASTPLAAPCRTRTAYSDVGFILLGEILSRAAGAPLEILFLR 183
Query: 167 QVWKPWGM-----------TETKFGPVELAVP--------------TVRGVEAGIVHDPK 201
+ +P G+ T+ K P P R G V D
Sbjct: 184 HIAEPLGLGTRFHRLSELPTDGKTAPTGATRPREPAPGQEGLWADVPSRASPPGEVDDDN 243
Query: 202 ARLLGRHAGSAGLFSTIKDLQIF 224
A ++ +G AGLF T D+ F
Sbjct: 244 AWVMDGVSGHAGLFGTAVDVARF 266
>gi|124003255|ref|ZP_01688105.1| beta-lactamase [Microscilla marina ATCC 23134]
gi|123991353|gb|EAY30784.1| beta-lactamase [Microscilla marina ATCC 23134]
Length = 353
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 40/270 (14%)
Query: 56 LASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDL-DPFIPN 114
LASVSK + L + G L+ D + + + YP +T+RQLLTH + + D ++
Sbjct: 75 LASVSKQFTAAGIMR-LHQKGLLEYDDPLSRYFKKFPYPKVTVRQLLTHTSGIPDVYMKL 133
Query: 115 RD-----------------LLTAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFN 157
D LLTA K + N R F YS+ ++LL ++E++
Sbjct: 134 ADEHNDMVGEVLSIQEVVQLLTAFPNKNKAYKPNAR----FQYSNTGYVLLAAVIEKVSG 189
Query: 158 QDLDVILKDQVWKPWGMTETKFGPVELAVPTVRGVEAGI------VHDPKARLLGRHAGS 211
+ + +K +++ P M T+ + A T G H L AG
Sbjct: 190 ESFEAYMKKELFDPLKMKNTRVWNLFSAQKTFANKTTGFWYTKGKYHQHAPSFLDGVAGD 249
Query: 212 AGLFSTIKDLQIFLEHYLADDF--ARDLNQNFSP--LDDKERS---LAWNLEG-DWLDHT 263
G+FS+++D I+ + + + ++L + F P LD+ + S W +E + HT
Sbjct: 250 GGVFSSVEDFVIWDKFWYGNSLISPQNLKEAFKPVKLDNGKISKYGFGWQVESRTRVSHT 309
Query: 264 G-YTG--TFIMWNRQKQEATIFLSNRTYEK 290
G + G T I+ + + + + L N T +K
Sbjct: 310 GAWLGARTAIVRDTEAKVCLVVLDNSTNKK 339
>gi|125717267|ref|YP_001034400.1| hypothetical protein SSA_0398 [Streptococcus sanguinis SK36]
gi|125497184|gb|ABN43850.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 592
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 72/299 (24%), Positives = 124/299 (41%), Gaps = 32/299 (10%)
Query: 28 KDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDF 87
KD+ + G D E G++ + V+D SV+K+ V LWE G++D++ + +
Sbjct: 64 KDSTIYQGNFGYMDKEKGIKADNSSVFDWGSVTKLT-VWIAVMQLWEQGKIDLEEDIKTY 122
Query: 88 LPESDYPD------ITIRQLLTHATDLDPFIPNRDLLTAPELKEAMFHLNRRSQPAFL-- 139
LPE+ + IT+ L+ H T D + E M + +P +
Sbjct: 123 LPENFLKNLHFDKAITMLDLMNHQTGFDESLSYTKGDKNIEENLRMLQPVQSFEPGTVTS 182
Query: 140 YSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELAVPTV-RGVEAGIVH 198
YS+ L I+ERI Q + +++P GM +T P P V + + +
Sbjct: 183 YSNYGAGLASLIVERISGQTFADYTHEHIFQPLGMDKTALLPDLSDNPYVQKKRQESKAY 242
Query: 199 DPKARLLGRHAGSAGLFS------TIKDLQIFLEHYLADDFARDLNQNFSPLDDKERS-- 250
D K LG GL+S T++DLQ F + L D + ++ L +
Sbjct: 243 DTKGNSLGTAFYEYGLYSIGQAAGTLEDLQKFAQALLGRKILFDRPETWNTLYTPTSTYP 302
Query: 251 ---LAWNLEGDWLD--------HTGYTGTF---IMWNRQKQEATIFLSNRTYEKDERAQ 295
+A N G W++ H G T F +M + + I ++N++ E++ Q
Sbjct: 303 GTDIARNAHGFWINEYGVSIIGHGGNTDGFSSRLMLDLESGIGYIVMTNQSMEENYNYQ 361
>gi|152967770|ref|YP_001363554.1| beta-lactamase [Kineococcus radiotolerans SRS30216]
gi|151362287|gb|ABS05290.1| beta-lactamase [Kineococcus radiotolerans SRS30216]
Length = 326
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 95/219 (43%), Gaps = 19/219 (8%)
Query: 14 IEAGIYPGAS-FAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFL 72
+ AG +PGAS + D G P G DL +V++V V L
Sbjct: 26 VRAGSFPGASAVSSAADGTVRRAVAGTLAPGDPDPVTPGTRADLGAVTEVF-TAVVVHAL 84
Query: 73 WEIGQLDIDRLVIDFLPESDYPDITIRQLLTHATDL--DPFIPNRDLLTAPELKEAMFHL 130
E+G +D+DR P T+ QLL H + L D +R L + + +
Sbjct: 85 AEVGAVDLDR------PTGR--GFTLAQLLAHTSGLPADSDARHRGDLRPAQRLQRVLDA 136
Query: 131 NRRSQPAFLY--SDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG----PVEL 184
S P + S V +++ G ++E Q LD ++++ V P G+ FG PV
Sbjct: 137 PLESAPGTVTRPSRVGYVVAGHLVEEATGQGLDALVEEFVTAPLGLRGPVFGTAGAPVAG 196
Query: 185 AV-PTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQ 222
V T G G+VHD A L R AG+AGLF T +++
Sbjct: 197 PVLATGGGTARGVVHDGLAASLRRPAGNAGLFGTAEEVH 235
>gi|88713933|ref|ZP_01108013.1| penicillin-binding protein [Flavobacteriales bacterium HTCC2170]
gi|88707766|gb|EAR00006.1| penicillin-binding protein [Flavobacteriales bacterium HTCC2170]
Length = 470
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 25/237 (10%)
Query: 20 PGASFAYFKDNQ--WTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQ 77
PG + +D + +T+ Y G +D EH +Q V+ + SVSK ++ L E G+
Sbjct: 40 PGCAIGIVQDGKLIYTKGY-GIADLEHDIQITPASVFYIGSVSKQFVTFSI-LLLEEQGK 97
Query: 78 LDIDRLVIDFLPESDYPD----ITIRQLLTHATDLDPFIP-----------NRDLLTAPE 122
L++D + +LP D+P+ +TIR + H + + ++ N D E
Sbjct: 98 LNLDDKIQKYLP--DFPEYDSTLTIRNFIHHTSGVRDYLTLMYLKGRNYLDNTDEDEVYE 155
Query: 123 LKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF--G 180
L + LN +LYS+ + +L I+E+ Q L +++P GM + F
Sbjct: 156 LIKKQKELNFTPGEKYLYSNSCYFMLAMIVEKAAGQSLKDFAHKNIFQPLGMKNSLFYDD 215
Query: 181 PVELAVPTVRGVEAGIVHDPKARLLGRH--AGSAGLFSTIKDLQIFLEHYLADDFAR 235
++ V E D L+ R GS G++S+I+DL ++ +++ + +
Sbjct: 216 NTDIIKNRVFSYEKKSNEDGFNNLIMRFDLVGSGGVYSSIEDLFLWDQNFYNNKLGK 272
>gi|156740942|ref|YP_001431071.1| beta-lactamase [Roseiflexus castenholzii DSM 13941]
gi|156232270|gb|ABU57053.1| beta-lactamase [Roseiflexus castenholzii DSM 13941]
Length = 338
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 37 LGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESD--YP 94
LG+++ E + LASVSK V L E G L +D ++ F + +
Sbjct: 38 LGKANLEQNTAISIATNFRLASVSKQFTAAAVLR-LAERGALSLDEPIVRFFESAPAFWR 96
Query: 95 DITIRQLLTHATDLDPFIPNRDLLTAPELKEA-MFHLNRR-----SQP--AFLYSDVHFL 146
IT+ LLTH + L + D TA +L + +F L RR + P AF YS+ +
Sbjct: 97 QITVHHLLTHTSGLVDYEELIDPNTATQLHDCDVFALVRRVDTGYAAPGAAFRYSNTGYC 156
Query: 147 LLGFILERIFNQDLDVILKDQVWKPWGMTET-KFGPVELAVP------TVRGVEAGIVHD 199
LL I+ER+ Q L++QV+ P GM T + A+P + RG G
Sbjct: 157 LLALIVERVAAQPFAAFLREQVFLPAGMRFTVAYEGESSAIPRRAFGYSFRG---GTFVR 213
Query: 200 PKARLLGRHAGSAGLFSTIKDLQ 222
L G G++S+ DL+
Sbjct: 214 TDQNLTSATLGDGGIYSSTIDLE 236
>gi|119875489|ref|ZP_01642555.1| beta-lactamase [Stenotrophomonas maltophilia R551-3]
gi|119822031|gb|EAX24623.1| beta-lactamase [Stenotrophomonas maltophilia R551-3]
Length = 476
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 38 GQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPD-- 95
G +D G+ + LAS +K+ + + + G+L +D + LP DYP+
Sbjct: 186 GDADRAAGIPVGVDTQFRLASSNKMFTSVAILQLVQD-GRLGLDDTIGKHLP--DYPNKA 242
Query: 96 ----ITIRQLLTHATDLDPFIPNRDLLTAPELKEAMFHLNR--RSQPAFL------YSDV 143
+T+RQLLTH + L F + + L+ ++ R + P F YS+
Sbjct: 243 VAGTVTVRQLLTHTSGLGDFFGDDFESYSASLRTLDDYVQRFAKDSPQFTPGSQDSYSNY 302
Query: 144 HFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVELAVPTVRGV-----EAGIVH 198
F++LG I+E + Q ++ + +P GMT T F P + VP R V +
Sbjct: 303 GFIVLGRIIEAVSGQSYYAYVEQHILRPAGMTGTGFEPETVNVPQ-RAVAYTKKNGQWIR 361
Query: 199 DPKARLLGRHAGSAGLFSTIKDLQIFLE 226
+ K+ L R + G +ST+ D+ F E
Sbjct: 362 ETKS-LPWRGMSAGGGYSTVADMVKFAE 388
>gi|120435988|ref|YP_861674.1| family 3 glycosyl hydrolase/beta-lactamase fusion protein [Gramella
forsetii KT0803]
gi|117578138|emb|CAL66607.1| family 3 glycosyl hydrolase/beta-lactamase fusion protein [Gramella
forsetii KT0803]
Length = 978
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 89/384 (23%), Positives = 148/384 (38%), Gaps = 79/384 (20%)
Query: 1 MKWTKIIKKIEEQIEAGIYPGASFAYFKDNQWT-EFYLGQSDPEHGLQTEAGLVYDLASV 59
+K KI I+ I + PGA + + E G E L VYDLAS+
Sbjct: 591 VKLKKIDSIIKYAINKEMTPGAQILIARKGKVIYEKNFGHQTYEKNLPVTDTTVYDLASL 650
Query: 60 SKVVGVGTVCTFLWEIGQLDIDRLVIDFLPE---SDYPDITIRQLLTHATDLDPFIPNRD 116
+K++ + L E L+ D + + P S+ +I ++ +L H L +IP
Sbjct: 651 TKILATLPLIMELDEEEVLNFDTTLSELFPSFKNSNKKNIRLQDMLMHYARLQAWIPFYI 710
Query: 117 LLTAPELKEAMFHLNRRSQPA-----------FLYSDVHFLLLGFI----LERIFN---- 157
P+ K + ++ P+ ++ D+ +L I LER
Sbjct: 711 STLDPKTK-GLSNIYYNENPSEEFNTQVADKIYIRKDIGDTILTTIKKSDLERSLKYKYS 769
Query: 158 ----------------QDLDVILKDQVWKPWG------MTETKFGPVELAVPTV------ 189
L I ++ ++K G + T+F +++A PT
Sbjct: 770 DLPYYLLKYYLEAYYETSLQNITQEHLYKRLGANYTGYLPRTRFDSLQIA-PTENDQLWR 828
Query: 190 RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYL------ADDF-----ARDLN 238
R V G VHD A + G G AGLFST D+ ++ YL D F N
Sbjct: 829 RQVVRGYVHDQGAAMQGGIGGHAGLFSTANDVAKIMQAYLNGGSYGGDKFLEKETIEKYN 888
Query: 239 QNFSPLDDKERSLAWN-------------LEGDWLDHTGYTGTFIMWNRQKQEATIFLSN 285
+ DD R + ++ + H+G+TGTF + +++ +FLSN
Sbjct: 889 TCYYCEDDVRRGVGFDKPQLGNSGPTCNCVSMMSFGHSGFTGTFAWADPEEEIVYVFLSN 948
Query: 286 RTYEKDERAQWILD--RNQVMNLI 307
RTY + I + R+++ +I
Sbjct: 949 RTYPDSNNRKLIREDIRSEIQKVI 972
>gi|17227649|ref|NP_484197.1| penicillin-binding protein [Nostoc sp. PCC 7120]
gi|17135131|dbj|BAB77677.1| penicillin-binding protein [Nostoc sp. PCC 7120]
Length = 537
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 28/231 (12%)
Query: 20 PGASFAYFKDNQ--WTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQ 77
PG + A KD + + Y G +D EH ++ V+D+AS SK L G+
Sbjct: 22 PGFALAITKDGETVYKRGY-GIADLEHNIKIFPNSVFDIASTSKQF-TAMCIALLARKGK 79
Query: 78 LDID---RLVIDFLPESDYPDITIRQLLTHATDLDPFI--------------PNRDLLTA 120
L +D ++ I +P +YP IT+R L+ H + + ++ P+ +++
Sbjct: 80 LSLDDEIQIYISEIPRYEYP-ITVRHLIHHTSGIRDYLTLMGLAGMRCENEYPDNEIIG- 137
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
L LN + LYS+ + LL I++R+ + L V ++ P GM T F
Sbjct: 138 --LIARQKELNFKPGEEHLYSNSGYFLLAEIVKRVSGESLAVFADKHIFSPLGMKTTHFH 195
Query: 181 PVELAVPTVRGVEAGIVHDPKARL---LGRHAGSAGLFSTIKDLQIFLEHY 228
+ + R + + + R+ + G G+++T++DL I+ +++
Sbjct: 196 DDFTRIVSNRAIGYSLKDEGSFRIDMSILDVVGDGGIYTTVEDLCIWDKNF 246
>gi|76257903|ref|ZP_00765560.1| Beta-lactamase [Chloroflexus aurantiacus J-10-fl]
gi|76166989|gb|EAO61112.1| Beta-lactamase [Chloroflexus aurantiacus J-10-fl]
Length = 392
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 67/297 (22%), Positives = 128/297 (43%), Gaps = 33/297 (11%)
Query: 15 EAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWE 74
E G + GA ++ G ++ E L A + +AS+SK + + L
Sbjct: 85 EQGQFRGAVLVATQERILVARGYGLANAERNLPNTAQTRFRIASISKPITAVAILQ-LQA 143
Query: 75 IGQLDIDRLVIDFLPE--SDYPDITIRQLLTHATDLDPFIPNRDL-------LTAPELKE 125
G+L +D V +LP+ + + +T+ LLTH + + + + +T +L E
Sbjct: 144 AGKLVVDESVCQYLPDCPTAWQAVTLHHLLTHTSGIPNYTDFANFAEVELSPVTPRQLME 203
Query: 126 AMFHLNRRSQP--AFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF--GP 181
+L P A+ YS+ ++++LG I+E + Q ++D ++ P GM + + G
Sbjct: 204 RFRNLPLDFVPGSAYRYSNSNYVVLGLIIEAVSGQPYADYIRDNIFVPAGMINSGYDTGD 263
Query: 182 VELAVPTV----RGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDF--AR 235
+ TV G+E I D + GL+ST++DL F++ + A
Sbjct: 264 ASVLNGTVGYLGPGIERSIPIDTSNLY-----SAGGLYSTVEDLYRFVQALNSGQLLPAN 318
Query: 236 DLNQNFSPLDDKERSLAWNLEG----DWLDHTGYTG---TFIMWNRQKQEATIFLSN 285
+L + ++P + W +E + H G+ T + + ++Q + LSN
Sbjct: 319 ELAKMYTP-NRSNYGYGWKIEDRNGRRVIYHPGFISGAVTHLAYYPERQSVVVVLSN 374
>gi|75907742|ref|YP_322038.1| Beta-lactamase [Anabaena variabilis ATCC 29413]
gi|75701467|gb|ABA21143.1| Beta-lactamase [Anabaena variabilis ATCC 29413]
Length = 537
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 28/231 (12%)
Query: 20 PGASFAYFKDNQ--WTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQ 77
PG + A KD + + Y G +D EH ++ V+D+AS SK L G+
Sbjct: 22 PGFALAITKDGETVYKRGY-GIADLEHNIKIFPNSVFDIASTSKQF-TAMCIALLARKGK 79
Query: 78 LDID---RLVIDFLPESDYPDITIRQLLTHATDLDPFI--------------PNRDLLTA 120
L +D ++ I +P +YP IT+R L+ H + + ++ P+ +++
Sbjct: 80 LSLDDEIQIYISEIPRYEYP-ITVRHLIHHTSGIRDYLTLMGLAGMQCENDYPDNEIIG- 137
Query: 121 PELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFG 180
L LN + LYS+ + LL I++R+ + L V ++ P GM T F
Sbjct: 138 --LIARQKELNFKPGEEHLYSNSGYFLLAEIVKRVSGESLAVFADKHIFSPLGMKTTHFH 195
Query: 181 PVELAVPTVRGVEAGIVHDPKARL---LGRHAGSAGLFSTIKDLQIFLEHY 228
+ R + + + R+ + G G+++T++DL I+ +++
Sbjct: 196 DDFTRIVRNRAIGYSVRDEGSFRIDMSILDVVGDGGIYTTVEDLCIWDQNF 246
>gi|117164514|emb|CAJ88060.1| putative cmcPBP [Streptomyces ambofaciens ATCC 23877]
Length = 484
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 66/239 (27%), Positives = 97/239 (40%), Gaps = 28/239 (11%)
Query: 20 PGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLD 79
PGAS A D E+ G ++T V+ + S++K+ T+ L E G+LD
Sbjct: 48 PGASLAVLVDGTVHEWASGVLHRGTNVETTTDSVFQMGSIAKIY-TATLVMQLIESGRLD 106
Query: 80 IDRLVIDFLPESDYPD------ITIRQLLTHATDLDPFIPNR-----DLLTAPELKEAMF 128
+D V D LP+ D I+ R+LL+H + L + D L
Sbjct: 107 LDAPVTDVLPDFSIGDPGATAMISTRRLLSHTSGLTCDFNHDSGRGDDCLAKYVEATKDV 166
Query: 129 HLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGPVE----- 183
L+ A YS V + +LG I+E + + D LKD + P G+T T P E
Sbjct: 167 ALDCPPGSAISYSSVGYNVLGRIVEVVTGKTWDAALKDLLLTPLGLTHTMTLPEEALRFR 226
Query: 184 -----LAVPTVRGVEAGIVHDPKARLLGRHAGSAG-LFSTIKDLQIFLEHYLADDFARD 236
L P A P+ ++ R AG G + +T DL +LA A D
Sbjct: 227 AAMGHLGEPGQEPAPA-----PEWDMMPRSAGPYGRVIATAGDLARLARMHLAGGVAED 280
>gi|146302515|ref|YP_001197106.1| beta-lactamase [Flavobacterium johnsoniae UW101]
gi|146156933|gb|ABQ07787.1| beta-lactamase [Flavobacterium johnsoniae UW101]
Length = 400
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 72/292 (24%), Positives = 120/292 (41%), Gaps = 50/292 (17%)
Query: 34 EFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDY 93
E Y G ++ G + +ASVSKV+ T L G++++D+ V L Y
Sbjct: 94 ERYNGFANKNEGTKITPETPVQIASVSKVL-TATAVLKLVNAGKIELDQKVNTILKTFPY 152
Query: 94 PDITIRQLLTHATDLDPF----------------IPNRDLLTAPELKEAMFHLNRRSQPA 137
D TIR LL H T + + + N+D+L K+ L ++
Sbjct: 153 EDCTIRMLLDHRTGMRNYAYFTDRDKSIWDRHNQLTNKDILDILATKD--IGLESKTGTR 210
Query: 138 FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF----GPVELAVPTVR--G 191
F Y + ++ +L I+E+I + + ++KP GMT T + VP+ + G
Sbjct: 211 FSYCNTNYAMLALIIEKITGLSYKEAMSEMIFKPLGMTHTYVFDDDKDRKKIVPSYKGNG 270
Query: 192 VEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARD--LNQNFSPLDDKE- 248
VE G + L G +FST +DL F + DF + L Q ++ ++
Sbjct: 271 VEIGFDY------LDNVYGDKNIFSTARDLLKFDRARQSPDFLKPELLKQVYTGYSNERK 324
Query: 249 ---------RSLAWNLEGDWLDHTGY----TGTFIMWNRQKQEATIF-LSNR 286
R + W ++ H G+ T ++I K+ TI LSN+
Sbjct: 325 GTKNYGLGIRMINWETGQNFYFHNGWWHGNTSSYI--TLMKEHVTIIALSNK 374
>gi|126646677|ref|ZP_01719187.1| Beta-lactamase [Algoriphagus sp. PR1]
gi|126576725|gb|EAZ80973.1| Beta-lactamase [Algoriphagus sp. PR1]
Length = 429
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 73/279 (26%), Positives = 108/279 (38%), Gaps = 55/279 (19%)
Query: 5 KIIKKIEEQIEAGIYPGASFAYFKDNQWT-EFYLGQSDPEHGLQTEAGLVYDLASVSKVV 63
KI +EE I + PG KD + + G +D G + E ++ +AS SK +
Sbjct: 47 KIDGMLEETISSNQVPGLVAMIVKDGKIVYQAAKGFADVPSGNEMEMDQIFRIASQSKAI 106
Query: 64 GVGTVCTFLWEIGQLDIDRLVIDFLPESDYP--------------------DITIRQLLT 103
T LWE G+ +D + F+PE P +I IR LLT
Sbjct: 107 -TSTAVMMLWEEGKFSLDDPISKFIPEFAQPQVLTNFRYGDTTYSSRPASREIRIRDLLT 165
Query: 104 HATDLD----------PFIPNR----DLLTAPELK-----EAMFHLNRRSQPAFLYS-DV 143
H + L I N+ DL T +K + + L P Y+ +
Sbjct: 166 HTSGLGYGVIDGDERFKMIYNKAGIVDLFTTKPVKISDNIKKLAKLPLHHDPGSQYTYSL 225
Query: 144 HFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF----GPVELAVPTVRGVEAG---- 195
+LG+ +E + D LK +++ P GM++T F E V R V+
Sbjct: 226 GLDVLGYFIEIVSGMPFDQFLKTRIFDPLGMSDTGFYLSDSQGERLVTVHRKVDGEWEAY 285
Query: 196 --IVHD---PKARLLGRHAGSAGLFSTIKDLQIFLEHYL 229
+D PK +G AGL ST D FL+ YL
Sbjct: 286 PITFYDTDYPKKGAKTFFSGGAGLSSTALDYAKFLQMYL 324
>gi|83857770|ref|ZP_00951298.1| penicillin-binding protein, putative [Croceibacter atlanticus
HTCC2559]
gi|83849137|gb|EAP87006.1| penicillin-binding protein, putative [Croceibacter atlanticus
HTCC2559]
Length = 431
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 25/197 (12%)
Query: 54 YDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDYPD-ITIRQLLTHATDL---- 108
+ + S+SK T+ L E G+L +D + + P+ + + ITI++LL H + +
Sbjct: 62 FRIGSISKTF-TATIIYQLIEAGKLSLDTKLSTYFPKIKHSEEITIKELLNHRSGIYNFT 120
Query: 109 -DPFIP--------NRDLLTAPELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQD 159
P P + DLL E F+ N +S+ YS+ +++LL +I+E I QD
Sbjct: 121 TSPAFPYMMYNETSHEDLLELIYNLEPAFYPNDKSE----YSNTNYVLLSYIIEEIEGQD 176
Query: 160 LDVILKDQVWKPWGMTETKFGP-VELA---VPTVRGVEAGIVHDPKARLLGRHAGSAGLF 215
L+ ++ +P G+ T +G +E+A + + V + D L +G+ +
Sbjct: 177 YAKSLQSRIAEPLGLKNTYYGKGIEIANNEASSFQYVSSWSKLDDSH--LSIPSGAGAIV 234
Query: 216 STIKDLQIFLEHYLADD 232
ST+ DL IF+ L +
Sbjct: 235 STVSDLTIFINSLLTTE 251
>gi|88704719|ref|ZP_01102432.1| penicillin-binding protein [gamma proteobacterium KT 71]
gi|88701040|gb|EAQ98146.1| penicillin-binding protein [Congregibacter litoralis KT71]
Length = 379
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 60/254 (23%), Positives = 104/254 (40%), Gaps = 40/254 (15%)
Query: 20 PGASFAYFKDNQWT-EFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQL 78
PG S +D +W + G ++ E + + V+ +ASVSK V L + G++
Sbjct: 43 PGCSVGVAQDGEWLLKTGYGLANMELAVPLDGSHVHRMASVSKQFTAMAV-LLLADEGKI 101
Query: 79 DIDRLVIDFLPE-SDY-PDITIRQLLTHATDLDPF------------------------- 111
D+D V D+LP Y +TI +L H + + +
Sbjct: 102 DLDADVRDYLPRLKPYGARVTINAMLGHVSGMGDYDLVAGSYEGPKADNAIDLRSAAGGE 161
Query: 112 --IPNRDLLTAPELKEAMFHLNRRSQP--AFLYSDVHFLLLGFILERIFNQDLDVILKDQ 167
+ N D LT E + L P FLYS++ +++L ++E + + L + +
Sbjct: 162 FRLGNEDYLTIEEFYAVVEQLPLAQSPEQGFLYSNIAYVILAMLVEDVSGESLRDYAERR 221
Query: 168 VWKPWGMTETKFG--PVELAVPTVRGV---EAGIVHDPKARLLGRHAGSAGLFSTIKDLQ 222
++ P GM + F PVE+ G + G+ + L G GL + + D+
Sbjct: 222 IFAPLGMHNSFFSDDPVEIVYQRADGYKKNDEGLYVNDMTNLF--WVGDGGLHTNLDDML 279
Query: 223 IFLEHYLADDFARD 236
I+ H+ A RD
Sbjct: 280 IWDSHFYAPKLGRD 293
>gi|94971974|ref|YP_594014.1| beta-lactamase [Deinococcus geothermalis DSM 11300]
gi|94554025|gb|ABF43940.1| beta-lactamase [Deinococcus geothermalis DSM 11300]
Length = 344
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 80/287 (27%), Positives = 116/287 (40%), Gaps = 35/287 (12%)
Query: 29 DNQWTEFYLGQSDPE-HGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDF 87
D Q LG + E + E +DLAS++K + E GQLD+D +
Sbjct: 40 DGQRDTLILGSAACEPRRVPLEEDFWWDLASLTKPLFTAREVLRAAEDGQLDLDDPLSSH 99
Query: 88 LPE------SDYPDITIRQLLTHATDLDPFIPNRDLLTAPELKEAMFHLNRRSQPA--FL 139
LP+ + T+RQLLTH L + P A ++ + P +
Sbjct: 100 LPDLAWAQDTALTSRTLRQLLTHTAGLPAWAPLYTWGDAATIRARVLQEVWVLTPPGELV 159
Query: 140 YSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKFGP------VELAVPTVRGVE 193
YSD+ ++LLG +LER+ + L+D P G T F P P R V
Sbjct: 160 YSDLGYILLGTVLERVRG----LPLRD---FPLGYGLT-FAPDPAHTVATERCPWRRRVL 211
Query: 194 AGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLADDFARDLNQNFSPLDD-KERSLA 252
G HD A LG AG AGLF T+ + E L + Q + + RSLA
Sbjct: 212 RGETHDENAWALGGVAGHAGLFGTLGGVLAQAESLLRGGWLSPAAQAAATRPELPGRSLA 271
Query: 253 W-NLEGDW----------LDHTGYTGTFIMWNRQKQEATIFLSNRTY 288
+ + W HTG+TGT + + A + L+NR +
Sbjct: 272 FVGAQPGWSGGSLASPSAFGHTGFTGTGFWVDPARGLAWVLLTNRVH 318
>gi|49477052|ref|YP_035273.1| beta-lactamase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49328608|gb|AAT59254.1| beta-lactamase [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 475
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 20 PGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKV-VGVGTVCTFLWEIGQL 78
PG S + D++ F G +D E GL +Y+LASVSK G+G + L E G L
Sbjct: 47 PGMSISILADDEVFYFSSGYADREKGLSASENTLYELASVSKAFTGMGIM--LLEEQGLL 104
Query: 79 DIDRLVIDFLP---------ESDYPDITIRQLLTHATDLDPF--IPNRDLLTAPELKEAM 127
+ V +LP D +T+ L H + L + N P++ +
Sbjct: 105 SMTDPVQKYLPWFTLKYQGKPVDMHSLTLNNFLHHTSGLTNIRHLQNIPQGNTPDMLQKT 164
Query: 128 FHLNRRSQPAFL------YSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTET 177
+ ++ AF Y V++ +LG ++E + Q + +K+QV++P G+ +T
Sbjct: 165 VEMLVDAELAFPPGEQYNYGTVNYDVLGLVIEIVSRQSYEDFMKEQVFQPLGLHQT 220
>gi|47564982|ref|ZP_00236026.1| fmtA-like protein, putative [Bacillus cereus G9241]
gi|47558355|gb|EAL16679.1| fmtA-like protein, putative [Bacillus cereus G9241]
Length = 475
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 20 PGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKV-VGVGTVCTFLWEIGQL 78
PG S + D++ F G +D E GL +Y+LASVSK G+G + L E G L
Sbjct: 47 PGMSISILADDEVFYFSSGYADREKGLSASENTLYELASVSKAFTGMGIM--LLEEQGLL 104
Query: 79 DIDRLVIDFLP---------ESDYPDITIRQLLTHATDLDPF--IPNRDLLTAPELKEAM 127
+ V +LP D +T+ L H + L + N P++ +
Sbjct: 105 SMTDPVQKYLPWFTLKYQGKPVDMQSLTLNNFLHHTSGLTNIRHLQNIPQGNTPDMLQKT 164
Query: 128 FHLNRRSQPAFL------YSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTET 177
+ ++ AF Y V++ +LG ++E + Q + +K+Q+++P G+ +T
Sbjct: 165 VEMLVDAELAFPPGEQYNYGTVNYDVLGLVIEIVSRQSYEDFMKEQIFQPLGLHQT 220
>gi|54295253|ref|YP_127668.1| hypothetical protein lpl2336 [Legionella pneumophila str. Lens]
gi|53755085|emb|CAH16576.1| hypothetical protein [Legionella pneumophila str. Lens]
Length = 359
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 29/242 (11%)
Query: 10 IEEQIEAGIY----PGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGV 65
I + ++ IY PG + A + + + + G +D + +++LAS++K+ +
Sbjct: 33 INQLVQPFIYAHQTPGLAIAIYYNGKDYYYNFGFADRKSKKPVTKNTIFELASITKIF-I 91
Query: 66 GTVCTFLWEIGQLDIDRLVIDFLPESDYPD------ITIRQLLTHATD----LDPFIPNR 115
T+ + G+L++ + + PE + + I L TH ++ F N+
Sbjct: 92 STLIALEVQKGKLNVTDYAVQYTPELSKTNGLPIDRVQIVHLATHTASFPKQMEQFGVNK 151
Query: 116 DLLTAPELKEAMF-HLNRRSQPA-----FLYSDVHFLLLGFILERIFNQDLDVILKDQVW 169
+ +A F HL P + YS++ F LG+ILE N+ L +LK +
Sbjct: 152 GNI------QAFFAHLKTWRPPVKTGTHYKYSNIGFGYLGYILENASNETLPNLLKSNIT 205
Query: 170 KPWGMTETKFG-PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHY 228
KP GM+ T F P LA +G P R G L S+ D+ +FL+
Sbjct: 206 KPLGMSHTFFNVPESLANYEAQGYRPKNKPAPYYR-PANFLGGGALRSSAADMLVFLKAN 264
Query: 229 LA 230
L
Sbjct: 265 LG 266
>gi|52842621|ref|YP_096420.1| AMPC cephalosporinase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|52629732|gb|AAU28473.1| AMPC cephalosporinase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
Length = 407
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 13/232 (5%)
Query: 10 IEEQIEAGIYPGASFAYFKDNQWTEFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVC 69
++ IE PG + A + + + + G +D + +++LAS++K+ + T+
Sbjct: 85 VQPIIETHRTPGLAIAIYYNGKDYYYNFGFADRKSKKPVTKNTIFELASITKIF-ISTLV 143
Query: 70 TFLWEIGQLDIDRLVIDFLPESDYPD------ITIRQLLTHATD----LDPFIPNRDLLT 119
+ G+L++ + + PE + + I L TH ++ F N+ +
Sbjct: 144 ALEVQKGKLNVTDYAVQYTPELSKTNGLPIDRVQIVHLATHTASFPKQMEQFGVNKGNIK 203
Query: 120 APELKEAMFHLNRRSQPAFLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTETKF 179
A + + + + YS++ F LG++LE N+ L +LK + KP GM+ T F
Sbjct: 204 AFFARLKTWRPPVKIGTQYKYSNIGFGYLGYVLENASNETLPNLLKSNITKPLGMSHTFF 263
Query: 180 G-PVELAVPTVRGVEAGIVHDPKARLLGRHAGSAGLFSTIKDLQIFLEHYLA 230
P LA +G P R G L S+ D+ +FL+ L
Sbjct: 264 NVPENLANYEAQGYRPKNKPAPYYR-PANFLGGGALRSSAADMLVFLKANLG 314
>gi|126663980|ref|ZP_01734974.1| penicillin-binding protein 4* [Flavobacteria bacterium BAL38]
gi|126623929|gb|EAZ94623.1| penicillin-binding protein 4* [Flavobacteria bacterium BAL38]
Length = 393
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 34 EFYLGQSDPEHGLQTEAGLVYDLASVSKVVGVGTVCTFLWEIGQLDIDRLVIDFLPESDY 93
E Y G + E G + +ASVSKV+ T+ + + +L +D LV LPE +
Sbjct: 86 ENYSGYAYKEKGDSIKQNTPLHIASVSKVITAVTILKLV-DAKKLKLDDLVTSILPEFPH 144
Query: 94 PDITIRQLLTHATDLDPF---------------IPNRDLLTAPELKEAMFHLNRRSQPA- 137
T+R LL H + L + + N+D+LT K+ + S P
Sbjct: 145 EKTTVRMLLNHRSGLRNYAYFTDDKGVWDKKKTLTNQDVLTLLATKK----IGLESTPGT 200
Query: 138 -FLYSDVHFLLLGFILERIFNQDLDVILKDQVWKPWGMTET 177
F Y + ++ LL ++E++ N+ +L++ ++ P GM T
Sbjct: 201 RFGYCNTNYALLALVIEKVTNKTYPKVLQELIFDPLGMKNT 241
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.322 0.139 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,254,528,757
Number of Sequences: 5470121
Number of extensions: 54421533
Number of successful extensions: 110399
Number of sequences better than 1.0e-05: 230
Number of HSP's better than 0.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 109743
Number of HSP's gapped (non-prelim): 304
length of query: 311
length of database: 1,894,087,724
effective HSP length: 132
effective length of query: 179
effective length of database: 1,172,031,752
effective search space: 209793683608
effective search space used: 209793683608
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)