BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SMu0633
(161 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24379164|ref|NP_721119.1| hypothetical protein SMU.692 [... 288 9e-77
gi|25011500|ref|NP_735895.1| hypothetical protein gbs1458 [... 206 3e-52
gi|22537535|ref|NP_688386.1| hypothetical protein SAG1388 [... 205 5e-52
gi|77405776|ref|ZP_00782861.1| conserved hypothetical prote... 204 1e-51
gi|139474018|ref|YP_001128734.1| hypothetical protein SpyM5... 203 2e-51
gi|21910070|ref|NP_664338.1| putative pore-forming peptide ... 203 3e-51
gi|15674842|ref|NP_269016.1| putative pore-forming peptide ... 202 4e-51
gi|56808734|ref|ZP_00366453.1| hypothetical protein SpyoM01... 202 4e-51
gi|55821149|ref|YP_139591.1| pore-forming peptide, putative... 201 1e-50
gi|71903260|ref|YP_280063.1| pore forming protein [Streptoc... 201 2e-50
gi|156720281|dbj|BAF76792.1| hypothetical protein [Streptoc... 185 6e-46
gi|76797686|ref|ZP_00779955.1| conserved hypothetical prote... 184 1e-45
gi|125718315|ref|YP_001035448.1| hypothetical protein SSA_1... 180 2e-44
gi|157074947|gb|ABV09630.1| conserved hypothetical protein ... 175 9e-43
gi|146318928|ref|YP_001198640.1| hypothetical protein SSU05... 143 2e-33
gi|81096895|ref|ZP_00875220.1| conserved hypothetical prote... 141 1e-32
gi|77412664|ref|ZP_00788931.1| Unknown [Streptococcus agala... 102 8e-21
gi|146321135|ref|YP_001200846.1| hypothetical protein SSU98... 86 9e-16
gi|77411514|ref|ZP_00787858.1| Unknown [Streptococcus agala... 66 6e-10
>gi|24379164|ref|NP_721119.1| hypothetical protein SMU.692 [Streptococcus mutans UA159]
gi|24377072|gb|AAN58425.1|AE014913_2 hypothetical protein SMU_692 [Streptococcus mutans UA159]
gi|62954738|dbj|BAD97690.1| hypothetical protein [Streptococcus mutans]
Length = 161
Score = 288 bits (736), Expect = 9e-77, Method: Composition-based stats.
Identities = 160/161 (99%), Positives = 161/161 (100%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV
Sbjct: 1 MIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP
Sbjct: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
Query: 121 KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKKPLR 161
KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKKPLR
Sbjct: 121 KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKKPLR 161
>gi|25011500|ref|NP_735895.1| hypothetical protein gbs1458 [Streptococcus agalactiae NEM316]
gi|76787027|ref|YP_330029.1| hypothetical protein SAK_1421 [Streptococcus agalactiae A909]
gi|77408637|ref|ZP_00785371.1| Unknown [Streptococcus agalactiae COH1]
gi|77415055|ref|ZP_00791120.1| Unknown [Streptococcus agalactiae 515]
gi|24413038|emb|CAD47117.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562084|gb|ABA44668.1| conserved hypothetical protein [Streptococcus agalactiae A909]
gi|77158894|gb|EAO70140.1| Unknown [Streptococcus agalactiae 515]
gi|77172755|gb|EAO75890.1| Unknown [Streptococcus agalactiae COH1]
Length = 163
Score = 206 bits (525), Expect = 3e-52, Method: Composition-based stats.
Identities = 106/160 (66%), Positives = 126/160 (78%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IK+FGK+RYHWQPELSW IIYWSI I PIFI LSLLYE+T IP F+LF F+VLVG+
Sbjct: 1 MIKLFGKIRYHWQPELSWAIIYWSIAIAPIFIGLSLLYERTEIPSQVFVLFAIFIVLVGI 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
GFHRYFVIE +G LR+VS N + SK I DI K+EVTKS+VT+ + +FYMRKWP
Sbjct: 61 GFHRYFVIEEDGYLRIVSFNFLRRSKFPIEDIAKIEVTKSSVTIKFNNNHERIFYMRKWP 120
Query: 121 KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKKPL 160
KKYFLDALA+ P FKGEVEL+DN I +DYFE Y+ +KK L
Sbjct: 121 KKYFLDALAIEPKFKGEVELLDNLIKMDYFECYRYDKKAL 160
>gi|22537535|ref|NP_688386.1| hypothetical protein SAG1388 [Streptococcus agalactiae 2603V/R]
gi|22534416|gb|AAN00259.1|AE014255_17 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
Length = 163
Score = 205 bits (522), Expect = 5e-52, Method: Composition-based stats.
Identities = 105/160 (65%), Positives = 126/160 (78%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IK+FGK+RYHWQPELSW IIYWSI I PIFI LSLLYE+T IP F+LF F+VLVG+
Sbjct: 1 MIKLFGKIRYHWQPELSWAIIYWSIAIAPIFIGLSLLYERTEIPSQVFVLFAIFIVLVGI 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
GFHRYFVIE +G LR+VS N + +K I DI K+EVTKS+VT+ + +FYMRKWP
Sbjct: 61 GFHRYFVIEEDGYLRIVSFNFLRRTKFPIEDIAKIEVTKSSVTIKFNNNHERIFYMRKWP 120
Query: 121 KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKKPL 160
KKYFLDALA+ P FKGEVEL+DN I +DYFE Y+ +KK L
Sbjct: 121 KKYFLDALAIEPTFKGEVELLDNLIKMDYFECYRYDKKAL 160
>gi|77405776|ref|ZP_00782861.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
gi|77175633|gb|EAO78417.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
Length = 163
Score = 204 bits (519), Expect = 1e-51, Method: Composition-based stats.
Identities = 105/160 (65%), Positives = 125/160 (78%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IK+FGK+RYHW PELSW IIYWSI I PIFI LSLLYE+T IP F+LF F+VLVG+
Sbjct: 1 MIKLFGKIRYHWXPELSWAIIYWSIAIAPIFIGLSLLYERTEIPSQVFVLFAIFIVLVGI 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
GFHRYFVIE +G LR+VS N + SK I DI K+EVTKS+VT+ + +FYMRKWP
Sbjct: 61 GFHRYFVIEEDGYLRIVSFNFLRRSKFPIEDIAKIEVTKSSVTIKFNNNHERIFYMRKWP 120
Query: 121 KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKKPL 160
KKYFLDALA+ P FKGEVEL+DN I +DYFE Y+ +KK L
Sbjct: 121 KKYFLDALAIEPTFKGEVELLDNLIKMDYFECYRYDKKAL 160
>gi|139474018|ref|YP_001128734.1| hypothetical protein SpyM51191 [Streptococcus pyogenes str.
Manfredo]
gi|134272265|emb|CAM30517.1| putative membrane protein [Streptococcus pyogenes str. Manfredo]
Length = 162
Score = 203 bits (517), Expect = 2e-51, Method: Composition-based stats.
Identities = 108/160 (67%), Positives = 127/160 (79%), Gaps = 1/160 (0%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IK+FGK+RYHWQPELSW IIYWSI PIF+ LSLLYE+T IP FILF F VLVG+
Sbjct: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
G HRYF+IENNGILR+VS +F P K+ I+ I K+EVTKST+ L V+ K LFYMRKWP
Sbjct: 61 GLHRYFIIENNGILRIVSFKLFGPCKLLISTITKIEVTKSTLCLHVE-DKSYLFYMRKWP 119
Query: 121 KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKKPL 160
KKYFLDALA++P F+GEV L DNFI LDYFE Y+ +KK L
Sbjct: 120 KKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKAL 159
>gi|21910070|ref|NP_664338.1| putative pore-forming peptide [Streptococcus pyogenes MGAS315]
gi|28896232|ref|NP_802582.1| putative pore-forming peptide [Streptococcus pyogenes SSI-1]
gi|21904261|gb|AAM79141.1| putative pore-forming peptide [Streptococcus pyogenes MGAS315]
gi|28811483|dbj|BAC64415.1| putative pore-forming peptide [Streptococcus pyogenes SSI-1]
Length = 162
Score = 203 bits (516), Expect = 3e-51, Method: Composition-based stats.
Identities = 108/160 (67%), Positives = 127/160 (79%), Gaps = 1/160 (0%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IK+FGK+RYHWQPELSW IIYWSI PIF+ LSLLYE+T IP FILF F VLVG+
Sbjct: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
G HRYF+IENNGILR+VS +F P K+ I+ I K+EVTKST+ L V+ K LFYMRKWP
Sbjct: 61 GLHRYFIIENNGILRIVSFELFGPRKLLISTITKIEVTKSTLCLHVE-DKSYLFYMRKWP 119
Query: 121 KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKKPL 160
KKYFLDALA++P F+GEV L DNFI LDYFE Y+ +KK L
Sbjct: 120 KKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKAL 159
>gi|15674842|ref|NP_269016.1| putative pore-forming peptide [Streptococcus pyogenes M1 GAS]
gi|19745881|ref|NP_607017.1| putative pore-forming peptide [Streptococcus pyogenes MGAS8232]
gi|50913978|ref|YP_059950.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS10394]
gi|71910428|ref|YP_281978.1| pore forming protein [Streptococcus pyogenes MGAS5005]
gi|94988301|ref|YP_596402.1| pore forming protein [Streptococcus pyogenes MGAS9429]
gi|94990179|ref|YP_598279.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS10270]
gi|94992177|ref|YP_600276.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS2096]
gi|94994098|ref|YP_602196.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS10750]
gi|13621976|gb|AAK33737.1| putative pore-forming peptide [Streptococcus pyogenes M1 GAS]
gi|19748033|gb|AAL97516.1| putative pore-forming peptide [Streptococcus pyogenes MGAS8232]
gi|50903052|gb|AAT86767.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS10394]
gi|71853210|gb|AAZ51233.1| pore forming protein [Streptococcus pyogenes MGAS5005]
gi|94541809|gb|ABF31858.1| pore forming protein [Streptococcus pyogenes MGAS9429]
gi|94543687|gb|ABF33735.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS10270]
gi|94545685|gb|ABF35732.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS2096]
gi|94547606|gb|ABF37652.1| Pore forming protein ebsA [Streptococcus pyogenes MGAS10750]
Length = 162
Score = 202 bits (515), Expect = 4e-51, Method: Composition-based stats.
Identities = 108/160 (67%), Positives = 127/160 (79%), Gaps = 1/160 (0%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IK+FGK+RYHWQPELSW IIYWSI PIF+ LSLLYE+T IP FILF F VLVG+
Sbjct: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
G HRYF+IENNGILR+VS +F P K+ I+ I K+EVTKST+ L V+ K LFYMRKWP
Sbjct: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHVE-DKSYLFYMRKWP 119
Query: 121 KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKKPL 160
KKYFLDALA++P F+GEV L DNFI LDYFE Y+ +KK L
Sbjct: 120 KKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKAL 159
>gi|56808734|ref|ZP_00366453.1| hypothetical protein SpyoM01000270 [Streptococcus pyogenes M49 591]
Length = 162
Score = 202 bits (515), Expect = 4e-51, Method: Composition-based stats.
Identities = 108/160 (67%), Positives = 127/160 (79%), Gaps = 1/160 (0%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IK+FGK+RYHWQPELSW IIYWSI PIF+ LSLLYE+T IP FILF F VLVG+
Sbjct: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
G HRYF+IENNGILR+VS +F P K+ I+ I K+EVTKST+ L V+ K LFYMRKWP
Sbjct: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISAITKIEVTKSTLCLHVE-DKSYLFYMRKWP 119
Query: 121 KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKKPL 160
KKYFLDALA++P F+GEV L DNFI LDYFE Y+ +KK L
Sbjct: 120 KKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKAL 159
>gi|55821149|ref|YP_139591.1| pore-forming peptide, putative [Streptococcus thermophilus LMG
18311]
gi|55823060|ref|YP_141501.1| pore-forming peptide, putative [Streptococcus thermophilus
CNRZ1066]
gi|116627864|ref|YP_820483.1| hypothetical protein STER_1093 [Streptococcus thermophilus LMD-9]
gi|55737134|gb|AAV60776.1| pore-forming peptide, putative [Streptococcus thermophilus LMG
18311]
gi|55739045|gb|AAV62686.1| pore-forming peptide, putative [Streptococcus thermophilus
CNRZ1066]
gi|116101141|gb|ABJ66287.1| Uncharacterized conserved protein [Streptococcus thermophilus
LMD-9]
Length = 166
Score = 201 bits (511), Expect = 1e-50, Method: Composition-based stats.
Identities = 106/161 (65%), Positives = 128/161 (79%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IKIFGK RYHWQPELSWLIIYWS+ I PIFIA LL+E S+P + +LF FV L G+
Sbjct: 1 MIKIFGKYRYHWQPELSWLIIYWSLAITPIFIAGVLLFELYSVPSHILMLFTIFVALFGL 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
GFHRYF+IE+ GILR+VS N+FKP K+ I+DI+KVEV K+ + LI K KK FYMRKWP
Sbjct: 61 GFHRYFIIEDYGILRIVSFNIFKPRKVQISDIEKVEVIKTGLCLIFKNGKKRQFYMRKWP 120
Query: 121 KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKKPLR 161
KKYFLDALALHP+FKGEVEL+D+ N DYF Y++ KK L+
Sbjct: 121 KKYFLDALALHPNFKGEVELMDHMTNFDYFAFYEEPKKALK 161
>gi|71903260|ref|YP_280063.1| pore forming protein [Streptococcus pyogenes MGAS6180]
gi|71802355|gb|AAX71708.1| pore forming protein [Streptococcus pyogenes MGAS6180]
Length = 162
Score = 201 bits (510), Expect = 2e-50, Method: Composition-based stats.
Identities = 107/160 (66%), Positives = 126/160 (78%), Gaps = 1/160 (0%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IK+FGK+RYHWQPELSW IIYWSI PIF+ LSLLYE+T IP FILF F VLVG+
Sbjct: 1 MIKLFGKIRYHWQPELSWSIIYWSIAFAPIFVGLSLLYERTEIPSRVFILFAIFAVLVGI 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
G HRYF+IENNGILR+VS +F P K+ I+ I K+EVTKST+ L + K LFYMRKWP
Sbjct: 61 GLHRYFIIENNGILRIVSFKLFGPRKLLISTITKIEVTKSTLCLHFE-DKSYLFYMRKWP 119
Query: 121 KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKKPL 160
KKYFLDALA++P F+GEV L DNFI LDYFE Y+ +KK L
Sbjct: 120 KKYFLDALAVNPYFQGEVILSDNFIKLDYFEVYQHDKKAL 159
>gi|156720281|dbj|BAF76792.1| hypothetical protein [Streptococcus sobrinus]
Length = 167
Score = 185 bits (470), Expect = 6e-46, Method: Composition-based stats.
Identities = 97/158 (61%), Positives = 120/158 (75%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IKIFGKVRYHWQPELSW IIYWSIT +PIF+A+SL EQ S+P F++ VG+
Sbjct: 1 MIKIFGKVRYHWQPELSWSIIYWSITFIPIFLAMSLYREQVSVPWVGLTFIAIFLIFVGL 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
GFHRYF+ + L ++S NVFKP K+ IA IK+VEVTKST+ L+ K LFYMRKWP
Sbjct: 61 GFHRYFIFGEDNQLWIISFNVFKPLKVDIATIKRVEVTKSTLALVFTNGKSRLFYMRKWP 120
Query: 121 KKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEKK 158
KKYFLD LAL+P FKGEVEL+D+ +LDYF+ Y+ +KK
Sbjct: 121 KKYFLDDLALNPAFKGEVELLDHSESLDYFKLYQNDKK 158
>gi|76797686|ref|ZP_00779955.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
gi|76586980|gb|EAO63469.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
Length = 142
Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats.
Identities = 95/142 (66%), Positives = 113/142 (79%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IK+FGK+RYHWQPELSW IIYWSI I PIFI LSLLYE+T IP F+LF F+VLVG+
Sbjct: 1 MIKLFGKIRYHWQPELSWAIIYWSIAIAPIFIGLSLLYERTEIPSQVFVLFAIFIVLVGI 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWP 120
GFHRYFVIE +G LR+VS N + +K I DI K+EVTKS+VT+ + +FYMRKWP
Sbjct: 61 GFHRYFVIEEDGYLRIVSFNFLRRTKFPIEDIAKIEVTKSSVTIKFNNNHERIFYMRKWP 120
Query: 121 KKYFLDALALHPDFKGEVELID 142
KKYFLDALA+ P FKGEVEL+D
Sbjct: 121 KKYFLDALAIEPTFKGEVELLD 142
>gi|125718315|ref|YP_001035448.1| hypothetical protein SSA_1504 [Streptococcus sanguinis SK36]
gi|125498232|gb|ABN44898.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 162
Score = 180 bits (457), Expect = 2e-44, Method: Composition-based stats.
Identities = 88/154 (57%), Positives = 123/154 (79%), Gaps = 1/154 (0%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IKIFGKVRYHWQP+++ LIIYWS++++PIF+ L+L+YE + +P F F+VL+G+
Sbjct: 1 MIKIFGKVRYHWQPDVAILIIYWSLSVIPIFVGLALMYESSRVPTLVLFSFFLFMVLLGM 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCL-FYMRKW 119
G HRYF I ++G LR+++ N F P K+ I+DI+KVEVTK+++TL KG+ + F MRKW
Sbjct: 61 GVHRYFTIYDDGTLRIITANPFTPIKVKISDIEKVEVTKTSITLYFKGQSRSRSFCMRKW 120
Query: 120 PKKYFLDALALHPDFKGEVELIDNFINLDYFEAY 153
PKKYF++ALAL+ FKGEVEL+DNF ++DYFEAY
Sbjct: 121 PKKYFVNALALNEHFKGEVELVDNFTHIDYFEAY 154
>gi|157074947|gb|ABV09630.1| conserved hypothetical protein [Streptococcus gordonii str. Challis
substr. CH1]
Length = 162
Score = 175 bits (443), Expect = 9e-43, Method: Composition-based stats.
Identities = 89/154 (57%), Positives = 119/154 (77%), Gaps = 1/154 (0%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IKIFG++RYHWQP+LS L+IYWS++++PIFI LSL+YE + +P F+VL+GV
Sbjct: 1 MIKIFGQLRYHWQPDLSILVIYWSLSVIPIFIGLSLMYESSDVPTLVLFFLFLFMVLLGV 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKC-LFYMRKW 119
G HRYF I +NGILR+++ N F PSKI I+ I+KV VTK+++TL GK+K F MRKW
Sbjct: 61 GVHRYFTIYDNGILRIITANPFTPSKIDISTIRKVAVTKTSITLYFDGKEKGRTFCMRKW 120
Query: 120 PKKYFLDALALHPDFKGEVELIDNFINLDYFEAY 153
PKKYF++ LAL+ FKGEVEL+DN ++DYFE Y
Sbjct: 121 PKKYFVNDLALNKHFKGEVELVDNLTHIDYFETY 154
>gi|146318928|ref|YP_001198640.1| hypothetical protein SSU05_1274 [Streptococcus suis 05ZYH33]
gi|145689734|gb|ABP90240.1| hypothetical protein SSU05_1274 [Streptococcus suis 05ZYH33]
Length = 162
Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats.
Identities = 80/158 (50%), Positives = 108/158 (68%), Gaps = 2/158 (1%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IKIFGK+RYHWQP+LSW IIYWS+T PIFI ++LL E+ + + F +L F VLV +
Sbjct: 1 MIKIFGKIRYHWQPDLSWAIIYWSLTFTPIFIGMALLLEKLQVSRLFILLVSLFAVLVVL 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKG-KKKCLFYMRKW 119
G HRYF I++ LR+ S N F KI IA I+K+EV+ + + K ++YMRKW
Sbjct: 61 GLHRYFEIKDEH-LRIASANPFAVQKIEIATIEKIEVSYLAIRIFAKEFPNGRMYYMRKW 119
Query: 120 PKKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEK 157
KKYF++ LA+H FKG++ELID+ I DYFE Y +K
Sbjct: 120 TKKYFINHLAIHSCFKGKIELIDHLIKQDYFEEYYTKK 157
>gi|81096895|ref|ZP_00875220.1| conserved hypothetical protein [Streptococcus suis 89/1591]
gi|80977046|gb|EAP40604.1| conserved hypothetical protein [Streptococcus suis 89/1591]
Length = 162
Score = 141 bits (355), Expect = 1e-32, Method: Composition-based stats.
Identities = 78/158 (49%), Positives = 108/158 (68%), Gaps = 2/158 (1%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQTSIPQYFFILFITFVVLVGV 60
+IKIFGK+RYHWQP+LSW IIYWS+T PIFI ++LL E+ + + F +L F VLV +
Sbjct: 1 MIKIFGKIRYHWQPDLSWAIIYWSLTFTPIFIGMTLLLEKLQVSRLFILLVSLFAVLVVL 60
Query: 61 GFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKG-KKKCLFYMRKW 119
G HRYF I++ LR+ S N F KI IA I+K+EV+ + + + +++MRKW
Sbjct: 61 GLHRYFEIKDEH-LRIASANPFAVQKIEIATIEKIEVSYLAIRIFSQEFPNGQVYHMRKW 119
Query: 120 PKKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEK 157
KKYF++ LA+H FKG++ELID+ I DYFE Y +K
Sbjct: 120 TKKYFINHLAIHSCFKGKIELIDHLIKQDYFEEYYTKK 157
>gi|77412664|ref|ZP_00788931.1| Unknown [Streptococcus agalactiae CJB111]
gi|77161284|gb|EAO72328.1| Unknown [Streptococcus agalactiae CJB111]
Length = 90
Score = 102 bits (254), Expect = 8e-21, Method: Composition-based stats.
Identities = 52/87 (59%), Positives = 64/87 (73%)
Query: 74 LRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIVKGKKKCLFYMRKWPKKYFLDALALHPD 133
LR+VS N + SK I DI K+EVTKS+VT+ + +FYMRKWPKKYFLDALA+ P
Sbjct: 1 LRIVSFNFLRRSKFPIEDIAKIEVTKSSVTIKFNNNHERIFYMRKWPKKYFLDALAIEPK 60
Query: 134 FKGEVELIDNFINLDYFEAYKKEKKPL 160
KGEVEL+DN I +DYFE Y+ +KK L
Sbjct: 61 SKGEVELLDNLIKMDYFECYRYDKKAL 87
>gi|146321135|ref|YP_001200846.1| hypothetical protein SSU98_1288 [Streptococcus suis 98HAH33]
gi|145691941|gb|ABP92446.1| hypothetical protein SSU98_1288 [Streptococcus suis 98HAH33]
Length = 151
Score = 85.5 bits (210), Expect = 9e-16, Method: Composition-based stats.
Identities = 52/112 (46%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
Query: 47 FFILFITFVVLVGVGFHRYFVIENNGILRVVSLNVFKPSKIAIADIKKVEVTKSTVTLIV 106
F +L F VLV +G HRYF I++ LR+ S N F KI IA I+K+EV+ + +
Sbjct: 36 FILLVSLFAVLVVLGLHRYFEIKDEH-LRIASANPFAVQKIEIATIEKIEVSYLAIRIFA 94
Query: 107 KG-KKKCLFYMRKWPKKYFLDALALHPDFKGEVELIDNFINLDYFEAYKKEK 157
K ++YMRKW KKYF++ LA+H FKG++ELID+ I DYFE Y +K
Sbjct: 95 KEFPNGRMYYMRKWTKKYFINHLAIHSCFKGKIELIDHLIKQDYFEEYYTKK 146
>gi|77411514|ref|ZP_00787858.1| Unknown [Streptococcus agalactiae CJB111]
gi|77162440|gb|EAO73407.1| Unknown [Streptococcus agalactiae CJB111]
Length = 42
Score = 66.2 bits (160), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/41 (78%), Positives = 36/41 (87%)
Query: 1 VIKIFGKVRYHWQPELSWLIIYWSITIMPIFIALSLLYEQT 41
+IK+FGK+RYHWQPELSW IIYWSI I PIFI L LLYE+T
Sbjct: 1 MIKLFGKIRYHWQPELSWAIIYWSIAIAPIFIGLYLLYERT 41
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.329 0.146 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 591,006,545
Number of Sequences: 5470121
Number of extensions: 22384794
Number of successful extensions: 79299
Number of sequences better than 1.0e-05: 21
Number of HSP's better than 0.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 79267
Number of HSP's gapped (non-prelim): 21
length of query: 161
length of database: 1,894,087,724
effective HSP length: 122
effective length of query: 39
effective length of database: 1,226,732,962
effective search space: 47842585518
effective search space used: 47842585518
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 124 (52.4 bits)