United States National Library of Medicine National Institutes of Health

2008AB NCBI Taxonomy Source Information

Counts
Term Type Description Count (MRCONSO.RRF)
SCN Scientific name 354894
SY Designated synonym 101874
CMN Common name 9296
EQ Equivalent name 3602
USN Unique scientific name 1408
UCN Unique common name 252
USY Unique synonym 138
UE Unique equivalent name 7
Background
  • Every atom has a separate row in MRCONSO.RRF.
  • Sample data below are examples of strings (atoms) associated with each source Term Type.
  • Samples below are taken from MRCONSO.RRF, although not every field is shown.
  • Every atom is assigned a Metathesaurus Term Type based on source documentation or analysis.
  • Term Type abbreviations and full names are listed under 'TTY' in Appendix B3.
  • Term Types also appear in MRRANK.RRF.
  • See Section 2.7.1.3.4 in UMLS Documentation, Section 2, Metathesaurus for more information on MRCONSO.RRF, including examples of full rows displaying all data columns.
Sample Data
SCN  (return to top)
cui aui lui sui scui code str
C0327752 A2101584 L0489899 S2253060 7901 7901 Acipenser
C0445843 A2201253 L2039171 S2351171 13690 13690 Sphingobium yanoikuyae
C0946914 A2014531 L1842596 S2159581 29740 29740 Ulmus americana
C1081599 A2144413 L1994720 S2295166 29916 29916 Fusarium sp.
C1006849 A2163319 L2006311 S2313826 37431 37431 Lycopodiella inundata
C1009577 A2140304 L1989191 S2291113 41572 41572 Eremothamnus
C1014509 A2111424 L1950239 S2262722 49235 49235 Aulacoseira distans
C1015977 A2117199 L1960357 S2268415 51444 51444 Brodiaea coronaria
C0445742 A2192340 L2024687 S2342424 54291 54291 Raoultella ornithinolytica
SY  (return to top)
cui aui lui sui scui code str
C0085467 A2169503 L1962727 S2319892 471 471 Moraxella calcoacetica
C0445784 A2179744 L1925981 S2329988 752 752 Pasteurella bettyae corrig. Sneath and Stevens 1990
C0085495 A2708300 L2557513 S3032965 1352 1352 Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Balz 1984
C0314881 A2695863 L2557644 S3020531 1399 1399 Bacillus firmus Bredemann and Werner 1933
C0026913 A2212276 L1981327 S2362048 1764 1764 Tuberculose des oiseaux
C0997727 A2159911 L2010532 S2310475 5678 5678 Leishmania (Viannia) naiffi
C0999978 A2184878 L1933967 S2335043 11305 11305 Plant rhabdovirus subgroup A
C1008413 A2741715 L2558470 S3066369 39766 39766 Thiomicrospira denitrificans Timmer-ten Hoor 1975
C1015827 A2706411 L2559773 S3031076 51194 51194 Desulfofustis Friedrich et al. 1996
CMN  (return to top)
cui aui lui sui scui code str
C0522462 A2217094 L1945238 S2366751 2711 2711 apfelsine
C0996931 A2222853 L2010240 S2372468 4092 4092 leadwort-leaved tobacco
C0997220 A2220168 L1964644 S2369797 4628 4628 edible canna
C0036025 A1811090 L0189499 S1864583 4932 4932 brewer's yeast
C0598488 A1302476 L1119500 S1343140 6453 6453 abalone
C0998590 A2226976 L2038219 S2376558 7437 7437 solitary wasp
C0998972 A2156889 L1993187 S2307487 8255 8255 Japanese flounder
C0999569 A2224668 L1984920 S2374273 9735 9735 pantropical spotted dolphin
C0999580 A2103352 L0496065 S2254809 9784 9784 African elephants
EQ  (return to top)
cui aui lui sui scui code str
C0006034 A2028661 L1868843 S2173984 139 139 Borrelia burgdorferi sensu stricto
C0995370 A2688441 L1935579 S2252768 527 527 Acidiphilum sp.
C0995442 A2118568 L1962746 S2269755 939 939 Caldibacterium
C0995442 A2118632 L1962838 S2269819 939 939 Calidariibacterium
C0995867 A2688574 L1942890 S2262094 2153 2153 Asteroliplasma anaerobium
C0995904 A2689468 L1975350 S2317263 2223 2223 Methanisaeta concilii
C0999086 A2158290 L2009010 S2308870 8524 8524 Lacerta (Zootoca) vivipara
C0314959 A2745456 L0852133 S3070108 28113 28113 [Prevotella] heparinolytica
C1004866 A2153055 L1935644 S2303670 34092 34092 Hydrogenibacter acidophilus
USN  (return to top)
cui aui lui sui scui code str
C0997720 A2191236 L1994535 S2341339 5642 5642 Pycnoporus <fungus>
C0324878 A2182743 L2014966 S2332944 9971 9971 Pholidota <mammal>
C1000794 A2170871 L2006063 S2321230 13617 13617 Myrmecia <insect>
C1000961 A2718696 L2571094 S3043357 15062 15062 Lasia <angiosperm>
C1004509 A2137457 L1961731 S2288328 33452 33452 Dryas <butterfly>
C1005418 A2110068 L1948173 S2261387 35070 35070 Articulata <echinoderm>
C1006913 A2162126 L2004429 S2312662 37523 37523 Liriope <hydrozoan>
C1009617 A2197468 L2030072 S2347468 41632 41632 Schlechtendalia <plant>
C1011338 A2692908 L2570263 S3017577 44324 44324 Ambrosiella <Microascaceae>
UCN  (return to top)
cui aui lui sui scui code str
C0008544 A2225451 L1952884 S2375043 1046 1046 purple sulfur bacteria <Chromatiaceae>
C0330206 A2221072 L0526225 S2370695 3311 3311 ginkgo <biloba>
C0996716 A2221374 L1933817 S2370994 3565 3565 green amaranth <A. hybridus>
C0018874 A2227468 L1996097 S2377047 4231 4231 sunflowers <genus>
C1080913 A2746465 L2576312 S3071115 4641 4641 banana (non-hybrid forms)
C0997493 A2137716 L1984379 S2288573 5174 5174 Dutch elm disease fungus <O. ulmi>
C0009222 A2747079 L2584479 S3071727 6073 6073 coelenterates <cnidarians>
C0162615 A2745553 L2568695 S3070205 6279 6279 agent of lymphatic filariasis <Brugia malayi>
C0037204 A2749103 L2606474 S3073745 6433 6433 peanut worm <Sipunculida>
USY  (return to top)
cui aui lui sui scui code str
C0995246 A2168022 L1953399 S2318442 99 99 Microcyclus <bacteria>
C0013738 A2113361 L1942881 S2264642 539 539 Bacteroides corrodens <facultative anaerobe>
C0993612 A2113362 L1942882 S2264643 827 827 Bacteroides corrodens <obligate anaerobe>
C0035497 A2734537 L2575932 S3059193 1073 1073 Rhodomonas <bacteria>
C0001076 A2735676 L2575940 S3060332 2147 2147 Sapromyces <bacteria>
C0087179 A2709163 L2571078 S3033827 4575 4575 Euchlaena <angiosperm>
C0085330 A2702325 L2583583 S3026990 5878 5878 Ciliata <Ciliophora>
C0085345 A2722524 L2602733 S3047183 6029 6029 Microspors <Microsporidia>
C0999452 A2148271 L1999875 S2298945 9366 9366 Gymnurinae <insectivora>
UE  (return to top)
cui aui lui sui scui code str
C1494363 A9288447 L5764789 S6608441 245186 245186 Tanella <Bacteria>
C1629861 A9293924 L5764912 S6613917 283168 283168 Wernerella <Bacteria>
C1503486 A9250389 L5269727 S5992979 293088 293088 Martelia <bacteria>
C1077407 A12835142 L6656230 S7770853 162290 162290 Catonia <bacteria>
C1631012 A15058320 L7721902 S8920554 311235 311235 Dyella soli <strain BB4>
C2309805 A15016533 L7739237 S8984699 510495 510495 Bufo sp. MS-2006 <Bufo siculus>
C2310821 A15016724 L7720385 S8984700 515221 515221 Bufo sp. MS-2006 <unidentified Turkmenistan species>

Last reviewed: 09 February 2009
Last updated: 09 February 2009
First published: 09 February 2009
Metadata| Permanence level: Permanence Not Guaranteed