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Finding cDNAs

UGID:278376     UniGene Mm.100116     Mus musculus (mouse)   Zxdc
ZXD family zinc finger C (Zxdc)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_766590.1 ZXD family zinc finger C isoform 2 M. musculus 100.0 857
NP_079388.3 ZXD family zinc finger C isoform 1 H. sapiens 85.4 857
XP_692803.2 PREDICTED: similar to Zinc finger protein ZXDC (ZXD-like zinc finger protein) D. rerio 63.5 747

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; thymus; mammary gland; eye; mixed; skin; intestine; stomach; uncharacterized tissue; pancreas; uterus; epididymis; adipose tissue; testis; bladder; vagina; spinal cord; dorsal root ganglion; heart; lung; adrenal gland; oviduct; ovary; kidney; spleen; fertilized ovum; blood; connective tissue; liver
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6 D1|6
UniSTS entry: Chr 6 BE136473
UniSTS entry: Chr 6 (n/a)
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

NM_173002.3 Mus musculus ZXD family zinc finger C (Zxdc), transcript variant 2, mRNA PA
AK081005.1 Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930012F08 product:hypothetical protein, MGC:7160, full insert sequence P
AK080307.1 Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630047J06 product:hypothetical protein, MGC:7160, full insert sequence P
AK047538.1 Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930086F11 product:hypothetical protein, MGC:7160 and C2H2 and C2HC zinc fingers, full insert sequence P
AK044529.1 Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930019D16 product:hypothetical protein, MGC:7160, full insert sequence P
AK044429.1 Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930012H20 product:hypothetical protein, MGC:7160, full insert sequence P
AK047079.1 Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930017O16 product:hypothetical protein, MGC:7160, full insert sequence P
AK044948.1 Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130015D24 product:hypothetical protein, MGC:7160, full insert sequence P
AK042392.1 Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630087N05 product:hypothetical protein, MGC:7160, full insert sequence P
AK042190.1 Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630068C15 product:hypothetical P-type trefoil domain/Zn-finger, C2H2 type/Zinc finger C2H2 type domain profile containing protein, full insert sequence P
AK030287.1 Mus musculus 11 days pregnant adult female ovary and uterus cDNA, RIKEN full-length enriched library, clone:5031405O10 product:hypothetical protein, MGC:7160, full insert sequence P
AK218430.1 Mus musculus cDNA, clone:Y2G0145D01, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000057963, based on BLAT search P
AK213549.1 Mus musculus cDNA, clone:Y2G0128K19, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000057963, based on BLAT search P
AK205036.1 Mus musculus cDNA, clone:Y1G0150G24, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000057963, based on BLAT search P
AK201488.1 Mus musculus cDNA, clone:Y1G0138G18, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000057963, based on BLAT search P
AK186436.1 Mus musculus cDNA, clone:Y0G0137F04, strand:unspecified
AK185703.1 Mus musculus cDNA, clone:Y0G0134P07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000057963, based on BLAT search P
AK169517.1 Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630071O07 product:DNA-binding protein homolog [Mus musculus], full insert sequence P
NM_030260.3 Mus musculus ZXD family zinc finger C (Zxdc), transcript variant 1, mRNA P
BC003332.1 Mus musculus ZXD family zinc finger C, mRNA (cDNA clone MGC:7160 IMAGE:3256958), complete cds PA

EST sequences (10 of 229) [Show all sequences]

CA749362.1 Clone IMAGE:6831439 brain 5' read
BY014748.1 Clone G730047M22 lung 5' read P
BY261186.1 Clone K330305L12 brain 5' read P
BY369546.1 Clone F530001M06 kidney 3' read A
BY370534.1 Clone G430026J09 embryonic tissue 3' read A
BY372476.1 Clone G430136O17 kidney 3' read A
BY422532.1 Clone I920064E21 mixed 3' read A
BY424268.1 Clone I920072P14 kidney 3' read A
BY469276.1 Clone G270065L24 skin 3' read A
BY472451.1 Clone G270120E23 skin 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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