BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= HHVONE032
(1196 letters)
Database: nr
1,508,275 sequences; 485,782,529 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9629410|ref|NP_044631.1| UL29 [Human herpesvirus 1] >gnl|BL_O... 2392 0.0
gi|118747|sp|P17469|DNBI_HSV1F Major DNA-binding protein (Infect... 2384 0.0
gi|118748|sp|P17470|DNBI_HSV1K Major DNA-binding protein (Infect... 2382 0.0
gi|535785|dbj|BAA01507.1| DNA binding protein ICP8 [Human herpes... 2217 0.0
gi|9629299|ref|NP_044499.1| UL29 [Human herpesvirus 2] >gnl|BL_O... 2217 0.0
gi|544182|sp|P36384|DNBI_HSV2 Major DNA-binding protein (Infecte... 2215 0.0
gi|476362|pir||A48350 DNA-binding protein - human herpesvirus 2 2214 0.0
gi|30984457|ref|NP_851889.1| single-strand DNA-binding protein [... 1982 0.0
gi|118749|sp|P12639|DNBI_HSVB2 Major DNA-binding protein >gnl|BL... 1780 0.0
gi|9626768|ref|NP_041040.1| single stranded DNA binding protein ... 1254 0.0
gi|9629757|ref|NP_045248.1| 31 [Equine herpesvirus 4] >gnl|BL_OR... 1237 0.0
gi|9629845|ref|NP_045329.1| major DNA binding protein [Bovine he... 1234 0.0
gi|3721984|gb|AAC63429.1| DNA-binding protein [Pseudorabies virus] 1187 0.0
gi|9625904|ref|NP_040152.1| single stranded DNA binding protein ... 1165 0.0
gi|13242421|ref|NP_077444.1| ssDNA binding protein [Cercopitheci... 1140 0.0
gi|10180734|gb|AAG14222.1|AF243438_37 UL29 single stranded DNA b... 1017 0.0
gi|12084858|ref|NP_073323.1| UL29 single stranded DNA binding pr... 1014 0.0
gi|11095862|gb|AAG30069.1|AF282130_32 UL29 major DNA binding pro... 1012 0.0
gi|5821284|dbj|BAA83753.1| homolog of HSV-1 glycoprotein [Gallid... 1005 0.0
gi|10834900|ref|NP_066861.1| UL29 protein [Gallid herpesvirus 3]... 1004 0.0
gi|9635063|ref|NP_057788.1| UL29 [Gallid herpesvirus 2] >gnl|BL_... 984 0.0
gi|5918970|gb|AAD56201.1|AF168792_2 DNA binding protein [Gallid ... 477 e-133
gi|461947|sp|Q03444|DNBI_HSVE1 Major DNA-binding protein >gnl|BL... 385 e-105
gi|330107|gb|AAA45787.1| DNA-binding protein 277 1e-72
gi|24943092|ref|NP_733854.1| ORF2 [Callitrichine herpesvirus 3] ... 264 9e-69
gi|9625660|ref|NP_039911.1| major ssDNA binding protein [Human h... 248 4e-64
gi|18653813|ref|NP_570747.1| ssDNA binding protein [Macaca mulat... 246 1e-63
gi|13095583|ref|NP_076498.1| single-stranded DNA-binding protein... 246 1e-63
gi|30348509|emb|CAC84301.1| major DNA-binding protein [Saimiriin... 243 2e-62
gi|9625962|ref|NP_040208.1| major ssDNA-binding protein [Saimiri... 241 8e-62
gi|13249148|gb|AAK16699.1|AF324455_3 6 [murid herpesvirus 4] 240 1e-61
gi|9629557|ref|NP_044846.1| ssDNA binding protein [murid herpesv... 240 1e-61
gi|9631197|ref|NP_047980.1| major ssDNA binding protein [Ateline... 239 2e-61
gi|2246478|gb|AAB62603.1| ORF 06, major ssDNA binding protein ho... 237 9e-61
gi|18845968|ref|NP_572054.1| ORF 6; ss DNA binding protein ssDBP... 237 9e-61
gi|9628008|ref|NP_042602.1| single-stranded DNA binding protein ... 237 1e-60
gi|20453800|gb|AAM22112.1|AF478169_3 major DNA binding protein [... 234 7e-60
gi|27452772|gb|AAO12279.1| major DNA binding protein [Porcine ly... 231 6e-59
gi|27452847|gb|AAO12351.1| major DNA binding protein [Porcine ly... 231 8e-59
gi|27452807|gb|AAO12312.1| major DNA binding protein [Porcine ly... 227 1e-57
gi|10140932|ref|NP_065509.1| major ss DNA binding protein [Alcel... 226 2e-57
gi|27452792|gb|AAO12298.1| major DNA binding protein [Porcine ly... 226 2e-57
gi|18025535|gb|AAK95479.1| BALF2 [cercopithicine herpesvirus 15] 219 2e-55
gi|330750|gb|AAA46051.1| DNA-binding protein 144 1e-32
gi|14251049|ref|NP_116411.1| T57 [Tupaia herpesvirus] >gnl|BL_OR... 143 2e-32
gi|232005|sp|P13215|DNBI_SCMVC Major DNA-binding protein (MDBP) ... 141 8e-32
gi|20026659|ref|NP_612701.1| single-stranded DNA-binding protein... 137 9e-31
gi|9628764|ref|NP_043795.1| major DNA binding protein [Human her... 129 4e-28
gi|31377968|gb|AAP50618.1| rh92 [Rhesus cytomegalovirus strain 6... 128 6e-28
gi|2746271|gb|AAC40755.1| single-stranded DNA-binding protein [H... 128 6e-28
gi|9628343|ref|NP_042934.1| major DNA binding protein [Human her... 122 5e-26
gi|9633112|ref|NP_050222.1| major DNA binding protein [Human her... 120 2e-25
gi|232004|sp|P30672|DNBI_MCMVS Major DNA-binding protein (MDBP) ... 118 8e-25
gi|29423452|gb|AAO73453.1| major DNA-binding protein [Human herp... 101 7e-20
gi|2147646|pir||S69894 major DNA-binding protein - cottontail ra... 100 2e-19
gi|9625742|ref|NP_039991.1| UL57 [Human herpesvirus 5] >gnl|BL_O... 99 4e-19
gi|2959355|emb|CAA12265.1| UL29 [Feline herpesvirus 1] 87 2e-15
gi|9845349|ref|NP_064163.1| pR57 [Rat cytomegalovirus] >gnl|BL_O... 81 1e-13
gi|1000719|gb|AAC54477.1| major ssDNA-binding protein 64 2e-08
>gi|9629410|ref|NP_044631.1| UL29 [Human herpesvirus 1]
gi|118746|sp|P04296|DNBI_HSV11 Major DNA-binding protein (Infected
cell protein 8) (ICP 8 protein)
gi|74040|pir||DNBEV1 major DNA-binding protein UL29 - human
herpesvirus 1 (strain 17)
gi|59529|emb|CAA32322.1| UL29 [Human herpesvirus 1]
gi|59863|emb|CAA26940.1| DNA binding protein [Human herpesvirus 1]
Length = 1196
Score = 2392 bits (6200), Expect = 0.0
Identities = 1196/1196 (100%), Positives = 1196/1196 (100%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG
Sbjct: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR
Sbjct: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
Query: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG 180
RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG
Sbjct: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG 180
Query: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL 240
SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL
Sbjct: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL 240
Query: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRD 300
FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRD
Sbjct: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRD 300
Query: 301 GGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANA 360
GGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANA
Sbjct: 301 GGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANA 360
Query: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ
Sbjct: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
Query: 421 VDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGR 480
VDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGR
Sbjct: 421 VDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGR 480
Query: 481 QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMN 540
QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMN
Sbjct: 481 QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMN 540
Query: 541 SMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAM 600
SMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAM
Sbjct: 541 SMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAM 600
Query: 601 GRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDP 660
GRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDP
Sbjct: 601 GRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDP 660
Query: 661 YACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN 720
YACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN
Sbjct: 661 YACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN 720
Query: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA
Sbjct: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
Query: 781 GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP 840
GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP
Sbjct: 781 GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP 840
Query: 841 QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI 900
QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI
Sbjct: 841 QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI 900
Query: 901 LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWT 960
LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWT
Sbjct: 901 LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWT 960
Query: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDR 1020
SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDR
Sbjct: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDR 1020
Query: 1021 TRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT 1080
TRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT
Sbjct: 1021 TRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT 1080
Query: 1081 QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE 1140
QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE
Sbjct: 1081 QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE 1140
Query: 1141 VFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML 1196
VFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML
Sbjct: 1141 VFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML 1196
>gi|118747|sp|P17469|DNBI_HSV1F Major DNA-binding protein (Infected
cell protein 8) (ICP 8 protein)
gi|74042|pir||DNBEHF DNA-binding protein - human herpesvirus 1
(strain F)
Length = 1196
Score = 2384 bits (6178), Expect = 0.0
Identities = 1193/1196 (99%), Positives = 1194/1196 (99%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG
Sbjct: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR
Sbjct: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
Query: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG 180
RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAV INNTFLHLGG
Sbjct: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVSINNTFLHLGG 180
Query: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL 240
SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL
Sbjct: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL 240
Query: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRD 300
FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRG RD
Sbjct: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGERD 300
Query: 301 GGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANA 360
GGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANA
Sbjct: 301 GGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANA 360
Query: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ
Sbjct: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
Query: 421 VDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGR 480
VDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGR
Sbjct: 421 VDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGR 480
Query: 481 QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMN 540
QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMN
Sbjct: 481 QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMN 540
Query: 541 SMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAM 600
SMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAM
Sbjct: 541 SMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAM 600
Query: 601 GRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDP 660
GRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDP
Sbjct: 601 GRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDP 660
Query: 661 YACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN 720
YACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN
Sbjct: 661 YACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN 720
Query: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA
Sbjct: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
Query: 781 GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP 840
GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP
Sbjct: 781 GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP 840
Query: 841 QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI 900
QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI
Sbjct: 841 QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI 900
Query: 901 LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWT 960
LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARAL+DAVDAHPGAWT
Sbjct: 901 LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALVDAVDAHPGAWT 960
Query: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDR 1020
SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDR
Sbjct: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDR 1020
Query: 1021 TRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT 1080
TRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT
Sbjct: 1021 TRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT 1080
Query: 1081 QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE 1140
QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE
Sbjct: 1081 QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE 1140
Query: 1141 VFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML 1196
VFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML
Sbjct: 1141 VFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML 1196
>gi|118748|sp|P17470|DNBI_HSV1K Major DNA-binding protein (Infected
cell protein 8) (ICP 8 protein)
gi|74041|pir||DNBEKS DNA-binding protein - human herpesvirus 1
(strain KOS1.1)
gi|330121|gb|AAA45793.1| ICP8 protein
Length = 1196
Score = 2382 bits (6172), Expect = 0.0
Identities = 1190/1196 (99%), Positives = 1192/1196 (99%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGD+DVAVAPLVVGLTVESG
Sbjct: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDADVAVAPLVVGLTVESG 60
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR
Sbjct: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
Query: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG 180
RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG
Sbjct: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG 180
Query: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL 240
SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGE FTYPLPFFNRPLNRLL
Sbjct: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGENFTYPLPFFNRPLNRLL 240
Query: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRD 300
FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRD
Sbjct: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRD 300
Query: 301 GGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANA 360
GGGKG AGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPL EGQDTAAARANA
Sbjct: 301 GGGKGPAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLCEGQDTAAARANA 360
Query: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ
Sbjct: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
Query: 421 VDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGR 480
VDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDG VIVGR
Sbjct: 421 VDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGGVIVGR 480
Query: 481 QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMN 540
QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMN
Sbjct: 481 QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMN 540
Query: 541 SMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAM 600
SMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAM
Sbjct: 541 SMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAM 600
Query: 601 GRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDP 660
GRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDP
Sbjct: 601 GRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDP 660
Query: 661 YACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN 720
YACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN
Sbjct: 661 YACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN 720
Query: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA
Sbjct: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
Query: 781 GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP 840
GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP
Sbjct: 781 GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP 840
Query: 841 QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI 900
QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI
Sbjct: 841 QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI 900
Query: 901 LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWT 960
LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWT
Sbjct: 901 LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWT 960
Query: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDR 1020
SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDR
Sbjct: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDR 1020
Query: 1021 TRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT 1080
TRKFVLACPRAGFVCAAS+LGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT
Sbjct: 1021 TRKFVLACPRAGFVCAASNLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT 1080
Query: 1081 QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE 1140
QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE
Sbjct: 1081 QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE 1140
Query: 1141 VFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML 1196
VFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML
Sbjct: 1141 VFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML 1196
>gi|535785|dbj|BAA01507.1| DNA binding protein ICP8 [Human herpesvirus
2]
Length = 1197
Score = 2217 bits (5746), Expect = 0.0
Identities = 1105/1198 (92%), Positives = 1141/1198 (95%), Gaps = 3/1198 (0%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
M+TKPKT TT+KVPPGP+GYVY RACP+EG+ELL+LLSARSGD+DVAVAPL+VGLTVESG
Sbjct: 1 MDTKPKTTTTVKVPPGPMGYVYGRACPAEGLELLSLLSARSGDADVAVAPLIVGLTVESG 60
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
FEANVA VVGS TTGLGGTAVSLKL PSHYS SVYVFHGGRHL PSTQAPNLTRLCERAR
Sbjct: 61 FEANVAAVVGSGTTGLGGTAVSLKLMPSHYSPSVYVFHGGRHLAPSTQAPNLTRLCERAR 120
Query: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG 180
RHFGFSDY PRP DLKHETTG+ALCERLGLDPDRALLYLV+TEGF+EAVCI+NTFLHLGG
Sbjct: 121 RHFGFSDYAPRPCDLKHETTGDALCERLGLDPDRALLYLVITEGFREAVCISNTFLHLGG 180
Query: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL 240
DKVTIG AEVHRIPVYPLQ+FMPDFSRVIA+PFN NHRSIGE F YPLPFFNRPL RLL
Sbjct: 181 MDKVTIGDAEVHRIPVYPLQMFMPDFSRVIADPFNCNHRSIGENFNYPLPFFNRPLARLL 240
Query: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRD 300
FEAVVGPAAVALR RNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGK RG RD
Sbjct: 241 FEAVVGPAAVALRARNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKPQRGARD 300
Query: 301 GGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANA 360
G KG AGGFEQRLASVMAGDAALALESIVSMAVFDEPP DI+ WPL EGQ+T AARA A
Sbjct: 301 AGNKGPAGGFEQRLASVMAGDAALALESIVSMAVFDEPPPDITTWPLLEGQETPAARAGA 360
Query: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ
Sbjct: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
Query: 421 VDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGR 480
+DREGHVVPG+EGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDG VIVGR
Sbjct: 421 LDREGHVVPGYEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGGVIVGR 480
Query: 481 QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMN 540
QEMDVFRYVADS QTDVPCNLCTF+TRHAC HTTLMRLRARHPKFASAARGAIGVFGTMN
Sbjct: 481 QEMDVFRYVADSGQTDVPCNLCTFETRHACAHTTLMRLRARHPKFASAARGAIGVFGTMN 540
Query: 541 SMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAM 600
S YSDCDVLGNYAAFSALKRADGSE RTIMQETYRAATERVMAELE LQYVDQAVPTA+
Sbjct: 541 SAYSDCDVLGNYAAFSALKRADGSENTRTIMQETYRAATERVMAELEALQYVDQAVPTAL 600
Query: 601 GRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDP 660
GRLETII NREALHTVVNN++Q+VDREVEQLMRNL+EGRNFKFRDGL EANHAMSL+LDP
Sbjct: 601 GRLETIIGNREALHTVVNNIKQLVDREVEQLMRNLIEGRNFKFRDGLAEANHAMSLSLDP 660
Query: 661 YACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN 720
Y CGPCPLLQLL RRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMD+FN
Sbjct: 661 YTCGPCPLLQLLARRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDLFN 720
Query: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA
Sbjct: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
Query: 781 GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP 840
GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHA IFPNGKPPGSNQPNP
Sbjct: 781 GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAVIFPNGKPPGSNQPNP 840
Query: 841 QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI 900
QWFWTALQRNQLPARLLSREDIETIAFIK+FSLDYGAINFINLAPNNVSELAMYYMANQI
Sbjct: 841 QWFWTALQRNQLPARLLSREDIETIAFIKRFSLDYGAINFINLAPNNVSELAMYYMANQI 900
Query: 901 LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWT 960
LRYCDHSTYFINTLTA+IAGSRRPPSVQAAAAW+ QGGAGLEAGARALMD++DAHPGAWT
Sbjct: 901 LRYCDHSTYFINTLTAVIAGSRRPPSVQAAAAWAPQGGAGLEAGARALMDSLDAHPGAWT 960
Query: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDR 1020
SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASL+GGKNACPLLIFDR
Sbjct: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLLGGKNACPLLIFDR 1020
Query: 1021 TRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT 1080
TRKFVLACPRAGFVCAASSLGGGAHE SLCEQLRGII+EGGAAVASSVFVATVKSLGPRT
Sbjct: 1021 TRKFVLACPRAGFVCAASSLGGGAHEHSLCEQLRGIIAEGGAAVASSVFVATVKSLGPRT 1080
Query: 1081 QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE 1140
QQLQIEDWLALLEDEYLSEEMME T RALERG+GEWSTDAALEVAHEAEALVSQLG AGE
Sbjct: 1081 QQLQIEDWLALLEDEYLSEEMMEFTTRALERGHGEWSTDAALEVAHEAEALVSQLGAAGE 1140
Query: 1141 VFNFGDFGCEDDNATPFGG--PGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML 1196
VFNFGDFG EDD+A FGG A G A RKRAFHGDDPFGEGPP+KK DLTLDML
Sbjct: 1141 VFNFGDFGDEDDHAASFGGLAAAAAGAAGVARKRAFHGDDPFGEGPPEKK-DLTLDML 1197
>gi|9629299|ref|NP_044499.1| UL29 [Human herpesvirus 2]
gi|2829740|sp|P89452|DNBI_HSV2H Major DNA-binding protein (Infected
cell protein 8) (ICP 8 protein)
gi|1869852|emb|CAB06754.1| UL29 [Human herpesvirus 2]
Length = 1196
Score = 2217 bits (5744), Expect = 0.0
Identities = 1104/1197 (92%), Positives = 1141/1197 (95%), Gaps = 2/1197 (0%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
M+TKPKT TT+KVPPGP+GYVY RACP+EG+ELL+LLSARSGD+DVAVAPL+VGLTVESG
Sbjct: 1 MDTKPKTTTTVKVPPGPMGYVYGRACPAEGLELLSLLSARSGDADVAVAPLIVGLTVESG 60
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
FEANVA VVGSRTTGLGGTAVSLKL PSHYS SVYVFHGGRHL PSTQAPNLTRLCERAR
Sbjct: 61 FEANVAAVVGSRTTGLGGTAVSLKLMPSHYSPSVYVFHGGRHLAPSTQAPNLTRLCERAR 120
Query: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG 180
HFGF+DY PRP DLKHETTG+ALCERLGLDPDRALLYLV+TEGF+EAVCI+NTFLHLGG
Sbjct: 121 PHFGFADYAPRPCDLKHETTGDALCERLGLDPDRALLYLVITEGFREAVCISNTFLHLGG 180
Query: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL 240
DKVTIG AEVHRIPVYPLQ+FMPDFSRVIA+PFN NHRSIGE F YPLPFFNRPL RLL
Sbjct: 181 MDKVTIGDAEVHRIPVYPLQMFMPDFSRVIADPFNCNHRSIGENFNYPLPFFNRPLARLL 240
Query: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRD 300
FEAVVGPAAVALR RNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGK RG RD
Sbjct: 241 FEAVVGPAAVALRARNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKPQRGARD 300
Query: 301 GGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANA 360
G KG AGGFEQRLASVMAGDAALALESIVSMAVFDEPP DI+ WPL EGQ+T AARA A
Sbjct: 301 AGNKGPAGGFEQRLASVMAGDAALALESIVSMAVFDEPPPDITTWPLLEGQETPAARAGA 360
Query: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ
Sbjct: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
Query: 421 VDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGR 480
+DREGHVVPG+EGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDG VIVGR
Sbjct: 421 LDREGHVVPGYEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGGVIVGR 480
Query: 481 QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMN 540
QEMDVFRYVADS QTDVPCNLCTF+TRHAC HTTLMRLRARHPKFASAARGAIGVFGTMN
Sbjct: 481 QEMDVFRYVADSGQTDVPCNLCTFETRHACAHTTLMRLRARHPKFASAARGAIGVFGTMN 540
Query: 541 SMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAM 600
S YSDCDVLGNYAAFSALKRADGSE RTIMQETYRAATERVMAELE LQYVDQAVPTA+
Sbjct: 541 SAYSDCDVLGNYAAFSALKRADGSENTRTIMQETYRAATERVMAELEALQYVDQAVPTAL 600
Query: 601 GRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDP 660
GRLETII NREALHTVVNN++Q+VDREVEQLMRNL+EGRNFKFRDGL EANHAMSL+LDP
Sbjct: 601 GRLETIIGNREALHTVVNNIKQLVDREVEQLMRNLIEGRNFKFRDGLAEANHAMSLSLDP 660
Query: 661 YACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN 720
Y CGPCPLLQLL RRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMD+FN
Sbjct: 661 YTCGPCPLLQLLARRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDLFN 720
Query: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA
Sbjct: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
Query: 781 GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP 840
GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHA IFPNGKPPGSNQPNP
Sbjct: 781 GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAVIFPNGKPPGSNQPNP 840
Query: 841 QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI 900
QWFWTALQRNQLPARLLSREDIETIAFIK+FSLDYGAINFINLAPNNVSELAMYYMANQI
Sbjct: 841 QWFWTALQRNQLPARLLSREDIETIAFIKRFSLDYGAINFINLAPNNVSELAMYYMANQI 900
Query: 901 LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWT 960
LRYCDHSTYFINTLTA+IAGSRRPPSVQAAAAW+ QGGAGLEAGARALMD++DAHPGAWT
Sbjct: 901 LRYCDHSTYFINTLTAVIAGSRRPPSVQAAAAWAPQGGAGLEAGARALMDSLDAHPGAWT 960
Query: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDR 1020
SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASL+GGKNACPLLIFDR
Sbjct: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLLGGKNACPLLIFDR 1020
Query: 1021 TRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT 1080
TRKFVLACPRAGFVCAASSLGGGAHE SLCEQLRGII+EGGAAVASSVFVATVKSLGPRT
Sbjct: 1021 TRKFVLACPRAGFVCAASSLGGGAHEHSLCEQLRGIIAEGGAAVASSVFVATVKSLGPRT 1080
Query: 1081 QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE 1140
QQLQIEDWLALLEDEYLSEEMME T RALERG+GEWSTDAALEVAHEAEALVSQLG AGE
Sbjct: 1081 QQLQIEDWLALLEDEYLSEEMMEFTTRALERGHGEWSTDAALEVAHEAEALVSQLGAAGE 1140
Query: 1141 VFNFGDFGCEDDNATPFGG-PGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML 1196
VFNFGDFG EDD+A FGG A G A RKRAFHGDDPFGEGPP+KK DLTLDML
Sbjct: 1141 VFNFGDFGDEDDHAASFGGLAAAAGAAGVARKRAFHGDDPFGEGPPEKK-DLTLDML 1196
>gi|544182|sp|P36384|DNBI_HSV2 Major DNA-binding protein (Infected
cell protein 8) (ICP 8 protein)
Length = 1197
Score = 2215 bits (5740), Expect = 0.0
Identities = 1104/1198 (92%), Positives = 1140/1198 (95%), Gaps = 3/1198 (0%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
M+TKPKT TT+KVPPGP+GYVY RACP+EG+ELL+LLSARSGD+DVAVAPL+VGLTVESG
Sbjct: 1 MDTKPKTTTTVKVPPGPMGYVYGRACPAEGLELLSLLSARSGDADVAVAPLIVGLTVESG 60
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
FEANVA VVGS TTGLGGTAVSLKL PSHYS SVYVFHGGRHL PSTQAPNLTRLCERAR
Sbjct: 61 FEANVAAVVGSGTTGLGGTAVSLKLMPSHYSPSVYVFHGGRHLAPSTQAPNLTRLCERAR 120
Query: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG 180
RHFGFSDY PRP DLKHETTG+ALCERLGLDPDRALLYLV+TEGF+EAVCI+NTFLHLGG
Sbjct: 121 RHFGFSDYAPRPCDLKHETTGDALCERLGLDPDRALLYLVITEGFREAVCISNTFLHLGG 180
Query: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL 240
DKVTIG AEVHRIPVYPLQ+FMPDFSRVIA+PFN NHRSIGE F YPLPFFNRPL RLL
Sbjct: 181 MDKVTIGDAEVHRIPVYPLQMFMPDFSRVIADPFNCNHRSIGENFNYPLPFFNRPLARLL 240
Query: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRD 300
FEAVVGPAAVALR RNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGK RG RD
Sbjct: 241 FEAVVGPAAVALRARNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKPQRGARD 300
Query: 301 GGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANA 360
G KG AGGFEQRLASVMAGDAALALESIVSMAVFDEPP DI+ WPL EGQ+T AARA A
Sbjct: 301 AGNKGPAGGFEQRLASVMAGDAALALESIVSMAVFDEPPPDITTWPLLEGQETPAARAGA 360
Query: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ
Sbjct: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
Query: 421 VDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGR 480
+DREGHVVPG+EGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDG VIVGR
Sbjct: 421 LDREGHVVPGYEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGGVIVGR 480
Query: 481 QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMN 540
QEMDVFRYVADS QTDVPCNLCTF+TRHAC HTTLMRLRARHPKFASAARGAIGVFGTMN
Sbjct: 481 QEMDVFRYVADSGQTDVPCNLCTFETRHACAHTTLMRLRARHPKFASAARGAIGVFGTMN 540
Query: 541 SMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAM 600
S YSDCDVLGNYAAFSALKRADGSE RTIMQETYRAATERVMAELE LQYVDQAVPTA+
Sbjct: 541 SAYSDCDVLGNYAAFSALKRADGSENTRTIMQETYRAATERVMAELEALQYVDQAVPTAL 600
Query: 601 GRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDP 660
GRLETII NREALHTVVNN++Q+VDREVEQLMRNL+EGRNFKFRDGL EANHAMSL+LDP
Sbjct: 601 GRLETIIGNREALHTVVNNIKQLVDREVEQLMRNLIEGRNFKFRDGLAEANHAMSLSLDP 660
Query: 661 YACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN 720
Y CGPCPLLQLL RRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMD+FN
Sbjct: 661 YTCGPCPLLQLLARRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDLFN 720
Query: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA
Sbjct: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
Query: 781 GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP 840
GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHA IFPNGKPPGSNQPNP
Sbjct: 781 GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAVIFPNGKPPGSNQPNP 840
Query: 841 QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI 900
QWFWTALQRNQLPARLLSREDIETIAFIK+FSLDYGAINFINLAPNNVSELAMYYMANQI
Sbjct: 841 QWFWTALQRNQLPARLLSREDIETIAFIKRFSLDYGAINFINLAPNNVSELAMYYMANQI 900
Query: 901 LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWT 960
LRYCDHSTYFINTLTA+IAGSRRPPSVQAAAAW+ QGGAGLEAGARALMD++DAHPGAWT
Sbjct: 901 LRYCDHSTYFINTLTAVIAGSRRPPSVQAAAAWAPQGGAGLEAGARALMDSLDAHPGAWT 960
Query: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDR 1020
SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASL+GGKNACPLLIFDR
Sbjct: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLLGGKNACPLLIFDR 1020
Query: 1021 TRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT 1080
TRKFVLACPRAGFVCAASSLGGGAHE SLCEQLRGII+EGGAAVASSVFVATVKSLGPRT
Sbjct: 1021 TRKFVLACPRAGFVCAASSLGGGAHEHSLCEQLRGIIAEGGAAVASSVFVATVKSLGPRT 1080
Query: 1081 QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE 1140
QQLQIEDWLALLEDEYLSEEMME T RALERG+GEWSTDAALEVAHEAEALVSQLG AGE
Sbjct: 1081 QQLQIEDWLALLEDEYLSEEMMEFTTRALERGHGEWSTDAALEVAHEAEALVSQLGAAGE 1140
Query: 1141 VFNFGDFGCEDDNATPFGG--PGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML 1196
VFNFGDFG DD+A FGG A G A RKRAFHGDDPFGEGPP+KK DLTLDML
Sbjct: 1141 VFNFGDFGDADDHAASFGGLAAAAAGAAGVARKRAFHGDDPFGEGPPEKK-DLTLDML 1197
>gi|476362|pir||A48350 DNA-binding protein - human herpesvirus 2
Length = 1197
Score = 2214 bits (5737), Expect = 0.0
Identities = 1104/1198 (92%), Positives = 1140/1198 (95%), Gaps = 3/1198 (0%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
M+TKPKT TT+KVPPGP+GYVY RACP+EG+ELL+LLSARSGD+DVAVAPL+VGLTVESG
Sbjct: 1 MDTKPKTTTTVKVPPGPMGYVYGRACPAEGLELLSLLSARSGDADVAVAPLIVGLTVESG 60
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
FEANVA VVGS TTGLGGTAVSLKL PSHYS SVYVFHGGRHL PSTQAPNLTRLCERAR
Sbjct: 61 FEANVAAVVGSGTTGLGGTAVSLKLMPSHYSPSVYVFHGGRHLAPSTQAPNLTRLCERAR 120
Query: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG 180
RHFGFSDY PRP DLKHETTG+ALCERLGLDPDRALLYLV+TEGF+EAVCI+NTFLHLGG
Sbjct: 121 RHFGFSDYAPRPCDLKHETTGDALCERLGLDPDRALLYLVITEGFREAVCISNTFLHLGG 180
Query: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL 240
DKVTIG AEVHRIPVYPLQ+FMPDFSRVIA+PFN NHRSIGE F YPLPFFNRPL RLL
Sbjct: 181 MDKVTIGDAEVHRIPVYPLQMFMPDFSRVIADPFNCNHRSIGENFNYPLPFFNRPLARLL 240
Query: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRD 300
FEAVVGPAAVALR RNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGK RG RD
Sbjct: 241 FEAVVGPAAVALRARNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKPQRGARD 300
Query: 301 GGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANA 360
G KG AGGFEQRLASVMAGDAALALESIVSMAVFDEPP DI+ WPL EGQ+T AARA A
Sbjct: 301 AGNKGPAGGFEQRLASVMAGDAALALESIVSMAVFDEPPPDITTWPLLEGQETPAARAGA 360
Query: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ
Sbjct: 361 VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQ 420
Query: 421 VDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGR 480
+DREGHVVPG+EGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDG VIVGR
Sbjct: 421 LDREGHVVPGYEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGGVIVGR 480
Query: 481 QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMN 540
QEMDVFRYVADS QTDVPCNLCTF+TRHAC HTTLMRLRARHPKFASAARGAIGVFGTMN
Sbjct: 481 QEMDVFRYVADSGQTDVPCNLCTFETRHACAHTTLMRLRARHPKFASAARGAIGVFGTMN 540
Query: 541 SMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAM 600
S YSDCDVLGNYAAFSALKRADGSE RTIMQETYRAATERVMAELE LQYVDQAVPTA+
Sbjct: 541 SAYSDCDVLGNYAAFSALKRADGSENTRTIMQETYRAATERVMAELEALQYVDQAVPTAL 600
Query: 601 GRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDP 660
GRLETII NREALHTVVNN++Q+VDREVEQLMRNL+EGRNFKFRDGL EANHAMSL+LDP
Sbjct: 601 GRLETIIGNREALHTVVNNIKQLVDREVEQLMRNLIEGRNFKFRDGLAEANHAMSLSLDP 660
Query: 661 YACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN 720
Y CGPCPLLQLL RRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMD+FN
Sbjct: 661 YTCGPCPLLQLLARRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDLFN 720
Query: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA
Sbjct: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
Query: 781 GASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP 840
GASA ASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHA IFPNGKPPGSNQPNP
Sbjct: 781 GASACASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAVIFPNGKPPGSNQPNP 840
Query: 841 QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI 900
QWFWTALQRNQLPARLLSREDIETIAFIK+FSLDYGAINFINLAPNNVSELAMYYMANQI
Sbjct: 841 QWFWTALQRNQLPARLLSREDIETIAFIKRFSLDYGAINFINLAPNNVSELAMYYMANQI 900
Query: 901 LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWT 960
LRYCDHSTYFINTLTA+IAGSRRPPSVQAAAAW+ QGGAGLEAGARALMD++DAHPGAWT
Sbjct: 901 LRYCDHSTYFINTLTAVIAGSRRPPSVQAAAAWAPQGGAGLEAGARALMDSLDAHPGAWT 960
Query: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDR 1020
SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASL+GGKNACPLLIFDR
Sbjct: 961 SMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLLGGKNACPLLIFDR 1020
Query: 1021 TRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT 1080
TRKFVLACPRAGFVCAASSLGGGAHE SLCEQLRGII+EGGAAVASSVFVATVKSLGPRT
Sbjct: 1021 TRKFVLACPRAGFVCAASSLGGGAHEHSLCEQLRGIIAEGGAAVASSVFVATVKSLGPRT 1080
Query: 1081 QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE 1140
QQLQIEDWLALLEDEYLSEEMME T RALERG+GEWSTDAALEVAHEAEALVSQLG AGE
Sbjct: 1081 QQLQIEDWLALLEDEYLSEEMMEFTTRALERGHGEWSTDAALEVAHEAEALVSQLGAAGE 1140
Query: 1141 VFNFGDFGCEDDNATPFGG--PGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML 1196
VFNFGDFG EDD+A FGG A G A RKRAFHGDDPFGEGPP+KK DLTLDML
Sbjct: 1141 VFNFGDFGDEDDHAASFGGLAAAAAGAAGVARKRAFHGDDPFGEGPPEKK-DLTLDML 1197
>gi|30984457|ref|NP_851889.1| single-strand DNA-binding protein
[Cercopithecine herpesvirus 1]
gi|28804665|dbj|BAC58069.1| UL29 [Cercopithecine herpesvirus 1]
gi|30844271|gb|AAP41447.1| single-strand DNA-binding protein
[Cercopithecine herpesvirus 1]
Length = 1196
Score = 1982 bits (5134), Expect = 0.0
Identities = 987/1199 (82%), Positives = 1075/1199 (89%), Gaps = 6/1199 (0%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
ME K KT TTI+VPP PLGYVYARACP+ G+ L++LSARSGD+DVAV+PLVVGLTVESG
Sbjct: 1 MEPKAKTTTTIQVPPSPLGYVYARACPAGGLAELSMLSARSGDADVAVSPLVVGLTVESG 60
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
FEANVAVVVGSRTTGLGGTAVSLKLTPSH+S SVYVF+GGRHL+PST+APNLTRLCERAR
Sbjct: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHFSPSVYVFYGGRHLEPSTRAPNLTRLCERAR 120
Query: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG 180
R FGFS Y P+P +L++ETTGEALCERLGLDP+RALLYLVVTEGFKEAVCI+NTFLHLGG
Sbjct: 121 RQFGFSAYAPKPCELQNETTGEALCERLGLDPERALLYLVVTEGFKEAVCISNTFLHLGG 180
Query: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL 240
D+VT+GG V RIP+YPLQ+FMPD++RVIA+PFNANHRSIGE F YP PFFNR L LL
Sbjct: 181 IDEVTVGGDAVRRIPIYPLQMFMPDYNRVIADPFNANHRSIGENFDYPRPFFNRALAGLL 240
Query: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRD 300
F AVVGP AVALR RNVDAVARAAAHLAFDENHEGAALPADITFT + QGK P+GGRD
Sbjct: 241 FGAVVGPVAVALRTRNVDAVARAAAHLAFDENHEGAALPADITFTMLDGGQGKAPKGGRD 300
Query: 301 GG-GKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARAN 359
GG GK A GGFE+RLASVMAGDAALALES++SMAVFDEPPTDI+AWPL EGQDT ARA
Sbjct: 301 GGAGKAAQGGFERRLASVMAGDAALALESLMSMAVFDEPPTDIAAWPLLEGQDTPLARAT 360
Query: 360 AVGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANP 419
A+GAYLARAAGLVGAMVF TNSALHLTEVDDAGPADPKD SKPSFYRFFLVPGTHVAANP
Sbjct: 361 AIGAYLARAAGLVGAMVFGTNSALHLTEVDDAGPADPKDLSKPSFYRFFLVPGTHVAANP 420
Query: 420 QVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVG 479
QVDR+GH VPG EGR APLVGG QEF GEHLAMLCGFSPALLAKMLFYLERCDG VIVG
Sbjct: 421 QVDRDGHAVPGHEGRAAAPLVGGNQEFTGEHLAMLCGFSPALLAKMLFYLERCDGGVIVG 480
Query: 480 RQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTM 539
RQE+DV RYVADS+QTDVPC+LC +TRHAC HTTLMRLR RHP+FASAAR IGVFGTM
Sbjct: 481 RQELDVLRYVADSSQTDVPCDLCDLETRHACAHTTLMRLRGRHPRFASAARAPIGVFGTM 540
Query: 540 NSMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTA 599
NS YSDC+VLGNYAAFSA+KRAD +ETAR +MQETYRAATERVMAELE LQYVD AVPT+
Sbjct: 541 NSAYSDCEVLGNYAAFSAIKRADVAETARAVMQETYRAATERVMAELENLQYVDPAVPTS 600
Query: 600 MGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLD 659
+ +LE+IIT+R+AL TV+ NVRQ VDREVEQLMRNLVEGRNFKFRDGL EANHAMSL LD
Sbjct: 601 LAKLESIITHRDALQTVLTNVRQTVDREVEQLMRNLVEGRNFKFRDGLTEANHAMSLALD 660
Query: 660 PYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMF 719
P+A GPCPLLQLL RRSNLAVYQDLALSQCHGVFA QSVEGRNFRNQFQPVLRRRVMD+F
Sbjct: 661 PHAGGPCPLLQLLSRRSNLAVYQDLALSQCHGVFASQSVEGRNFRNQFQPVLRRRVMDLF 720
Query: 720 NNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLF 779
NNGFL AKTLT+ALS+GAAI APSLTAGQ APAE+ FEGDVARV LGFPKE+RVK+RV+F
Sbjct: 721 NNGFLPAKTLTIALSDGAAISAPSLTAGQAAPAETGFEGDVARVNLGFPKEMRVKNRVVF 780
Query: 780 AGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPN 839
AGA ANASEAAK RVA +Q+AYQK DK VDIL GP GFLLKQFHA +FPNGKPPGS+QPN
Sbjct: 781 AGAGANASEAAKNRVAGMQAAYQKSDKHVDILRGPAGFLLKQFHATLFPNGKPPGSSQPN 840
Query: 840 PQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQ 899
PQWFWTALQRNQ PA+LLSREDIE + FIK+FS +Y A NF+NLAPNN+SELAMYYMANQ
Sbjct: 841 PQWFWTALQRNQFPAKLLSREDIEALGFIKRFSAEYAASNFVNLAPNNISELAMYYMANQ 900
Query: 900 ILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAW 959
ILRYCDHSTY+INTLTAI+AGSRRPPS+QAAAAWS +GGA LEAG RAL+DA+D HPGAW
Sbjct: 901 ILRYCDHSTYYINTLTAILAGSRRPPSLQAAAAWSPRGGAALEAGTRALVDAIDEHPGAW 960
Query: 960 TSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFD 1019
T+MFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWA+++GGKNACPLLIFD
Sbjct: 961 TTMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWANILGGKNACPLLIFD 1020
Query: 1020 RTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPR 1079
RTRKFVLACPRAGFVCAAS+ G GAHESSLCEQLRGII+EGGA+VAS+VFVA VKSLG R
Sbjct: 1021 RTRKFVLACPRAGFVCAASAPGAGAHESSLCEQLRGIIAEGGASVASAVFVAAVKSLGNR 1080
Query: 1080 TQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNA- 1138
T QLQIEDWLALLEDEYLSEEMM TARALERG GEW+ +AALEVAHEAEALV+Q G A
Sbjct: 1081 TPQLQIEDWLALLEDEYLSEEMMAFTARALERGGGEWAAEAALEVAHEAEALVTQTGGAD 1140
Query: 1139 -GEVFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML 1196
GEVF+FG FG +DD FGG A A RKR DD FG+GPPDK+ +LTLD L
Sbjct: 1141 GGEVFDFGAFGVDDDEVPSFGGFAA--HAAGARKRPGAADDLFGDGPPDKR-ELTLDTL 1196
>gi|118749|sp|P12639|DNBI_HSVB2 Major DNA-binding protein
gi|74043|pir||DNBEBG DNA-binding protein - bovine herpesvirus 2
(strain BMV)
Length = 1186
Score = 1780 bits (4611), Expect = 0.0
Identities = 896/1199 (74%), Positives = 1001/1199 (82%), Gaps = 16/1199 (1%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
ME K KTATT+KV PGPLGYVYAR P EG+ LALLSARS DSD AV PL+ GLTVESG
Sbjct: 1 MENKQKTATTVKVSPGPLGYVYARRLPPEGLTELALLSARSADSDTAVLPLIAGLTVESG 60
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
F+ NVAVVVGSRTTG+GGT VSLKL PSHY+ S YVFHGGRHL PS+ APNL+ LC+RAR
Sbjct: 61 FDVNVAVVVGSRTTGVGGTGVSLKLMPSHYAPSAYVFHGGRHLAPSSAAPNLSLLCDRAR 120
Query: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG 180
FGFS + P+P + + ETTGEALCE LGL+P+ +LLY+V+ EGFKEAV I+NT LH+GG
Sbjct: 121 VQFGFSSFKPKPCEAEGETTGEALCEHLGLNPNESLLYMVIAEGFKEAVYISNTILHMGG 180
Query: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL 240
VTI G EV RIP+YPLQ+FMPD+ R +A+PFN HR+IGE F YPLPFFN L LL
Sbjct: 181 VGTVTIAGEEVRRIPIYPLQMFMPDYCRAVADPFNDRHRAIGEYFAYPLPFFNAKLASLL 240
Query: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTP-RGGR 299
F A VGPAAVALR RNVDAVARAAAHLAFDENHEGAALPADITFTAF+ + K R R
Sbjct: 241 FGAAVGPAAVALRARNVDAVARAAAHLAFDENHEGAALPADITFTAFDPTGSKAGHRNPR 300
Query: 300 DGGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARAN 359
+ GG GFEQRLASVMAGDAALALESI+SMAVF+EPPTDI WP+ Q++ AARA
Sbjct: 301 ECGG-----GFEQRLASVMAGDAALALESIMSMAVFEEPPTDIGTWPMLTCQESTAARAA 355
Query: 360 AVGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANP 419
++GAYL RAAGLVGAMVFS+NSALHLTEVDDAGPADPKD +KPSFYRFFLVPGT+VAANP
Sbjct: 356 SIGAYLGRAAGLVGAMVFSSNSALHLTEVDDAGPADPKDPTKPSFYRFFLVPGTYVAANP 415
Query: 420 QVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVG 479
Q+DR+G VV G EGRP P+VGG EF EHLA LCGFSP LLAKML+YLERCDG VI+G
Sbjct: 416 QLDRDGRVVAGHEGRPIVPIVGGNHEFTCEHLATLCGFSPELLAKMLYYLERCDGGVILG 475
Query: 480 RQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTM 539
R EMD F+YV+DS TDVPC LC+ D RH+C HTTL+RLRARHPKF S RGAIG+FG M
Sbjct: 476 RPEMDTFKYVSDSAHTDVPCCLCSLDNRHSCAHTTLLRLRARHPKFTSTTRGAIGIFGVM 535
Query: 540 NSMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTA 599
NS YSDCDVLGNYA+FSA+KR D ETAR IMQETYR+A ERVMAELE L Y+D AVPT+
Sbjct: 536 NSAYSDCDVLGNYASFSAIKRMDVQETARAIMQETYRSAVERVMAELENLNYIDAAVPTS 595
Query: 600 MGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLD 659
+LE+IIT REAL TVV+NV+QVVD EV QLMR LVEGR F+FR+ LGEANHAMSLTLD
Sbjct: 596 PAKLESIITGREALQTVVSNVKQVVDGEVAQLMRALVEGRGFRFREALGEANHAMSLTLD 655
Query: 660 PYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMF 719
P+A PCPLLQ+LGRRSNLAVYQDLALSQCHGVF GQ+VEGRNFR+QFQPVLRRRV+DMF
Sbjct: 656 PHASVPCPLLQMLGRRSNLAVYQDLALSQCHGVFEGQAVEGRNFRSQFQPVLRRRVLDMF 715
Query: 720 NNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLF 779
NNGFLSA+TLTVAL++GA I AP L +GQ A AES FEGDVARV LGFPKE+RVKSRVLF
Sbjct: 716 NNGFLSARTLTVALTDGACISAPGLVSGQHAAAESGFEGDVARVNLGFPKEIRVKSRVLF 775
Query: 780 AGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPN 839
AGA ASEAA+AR+A LQSAYQK DKRVDILLGPLGF+LKQFHA +FPNGKPPGS+ PN
Sbjct: 776 AGAGPAASEAARARIAGLQSAYQKSDKRVDILLGPLGFMLKQFHATLFPNGKPPGSDNPN 835
Query: 840 PQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQ 899
PQWFWTALQRNQLPARLLSREDI IAF+K+FS++YGA NF+NL PNN+SELAMYYMANQ
Sbjct: 836 PQWFWTALQRNQLPARLLSREDISLIAFVKRFSVEYGAGNFVNLPPNNISELAMYYMANQ 895
Query: 900 ILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAW 959
IL+YCDHSTYFINTLTA+IAGSRRPP+ QAAAAW+ +GG LEA AR+++ HPGAW
Sbjct: 896 ILKYCDHSTYFINTLTALIAGSRRPPNAQAAAAWAPRGGTELEAQARSVVANPGDHPGAW 955
Query: 960 TSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFD 1019
T+MFASCNLLRPVMA RPMVVLGLSISKYYGMAGNDRVFQAGN A+L+GGKNACPLLIFD
Sbjct: 956 TTMFASCNLLRPVMATRPMVVLGLSISKYYGMAGNDRVFQAGNLANLLGGKNACPLLIFD 1015
Query: 1020 RTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPR 1079
RTRKFV+ACPRAGFVCAA S G GAHESSLCEQLR II+EGGA VAS VF A KSLG R
Sbjct: 1016 RTRKFVIACPRAGFVCAAVSAGSGAHESSLCEQLRAIIAEGGATVASDVFAAAAKSLGAR 1075
Query: 1080 TQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAG 1139
QQLQIEDWLALLEDEYLSEEMMEL RALERG GEWS DAAL+VA EAEA+V++ +A
Sbjct: 1076 VQQLQIEDWLALLEDEYLSEEMMELAGRALERGGGEWSLDAALDVAREAEAMVTRHVDAE 1135
Query: 1140 EVFNFGDFGCEDDNATPFGGPGAPGPA--FAGRKRAFHGDDPFGEGPPDKKGDLTLDML 1196
E F+FG F ED GP G A R+R D FG+ P +K+ DLTLDML
Sbjct: 1136 ETFDFGAF-AED-------GPADAGLAVHLQSRRRPLACSDLFGDAPAEKRNDLTLDML 1186
>gi|9626768|ref|NP_041040.1| single stranded DNA binding protein
[Equine herpesvirus 1]
gi|118750|sp|P28932|DNBI_HSVEB Major DNA-binding protein
gi|74045|pir||DNBEC4 DNA-binding protein - equine herpesvirus 1
(strain Ab4p)
gi|330823|gb|AAB02466.1| single stranded DNA binding protein
Length = 1209
Score = 1254 bits (3245), Expect = 0.0
Identities = 641/1218 (52%), Positives = 840/1218 (68%), Gaps = 31/1218 (2%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
ME+ PKT + +P PLGYVYAR S ++L +ARS DSD+AV P++ GLTVE
Sbjct: 1 MESAPKT---VSLPVSPLGYVYARQKASLQTGTVSLTAARSVDSDLAVLPVIRGLTVEQT 57
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
F NVAVV GS+TTGLGGT ++LKLTPSH++ + +VF+GG + S+ APNLTR CE AR
Sbjct: 58 FTTNVAVVAGSKTTGLGGTGITLKLTPSHFNPNAFVFYGGSVIGASSNAPNLTRACEAAR 117
Query: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG 180
R FGFS ++ P + ET+GE +C L L P+ LYLVVTE FKE V + NTFLH GG
Sbjct: 118 RRFGFSAFSSPPVENAVETSGEEICASLNLSPETTALYLVVTESFKEMVYVCNTFLHYGG 177
Query: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL 240
+ VTI G + +IP+YP+QL+MPD +R+ +EPFNA HRSIG++F Y PFFN L RLL
Sbjct: 178 TSTVTIDGQDAMKIPIYPVQLYMPDVNRLASEPFNAKHRSIGDEFVYSRPFFNSDLCRLL 237
Query: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGG-- 298
V+GPAAVALR RN+D VAR AAHLA DENHEG+ LP D+TFT F+++QG +G
Sbjct: 238 HGYVLGPAAVALRVRNLDGVARGAAHLALDENHEGSVLPQDVTFTLFDSTQGNAGKGSGR 297
Query: 299 --RDGGGKG----AAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWP-LFEGQ 351
R G G G A+ G E+RLASVMA D AL+++SI+ ++D + WP L G
Sbjct: 298 AQRQGDGSGSKNSASSGIERRLASVMAADTALSVDSIMGAGIYDTELPSVEDWPVLSSGD 357
Query: 352 DTAAARANAVGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVP 411
DT + A+GAY AR +GLVGAMVFS NS L++TEVDD GPAD KD S PS++RF+L+
Sbjct: 358 DTES--LEALGAYAARLSGLVGAMVFSANSVLYMTEVDDGGPADGKDGSNPSYHRFYLIA 415
Query: 412 GTHVAANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLER 471
+VA NPQ D++G V+P + AP+ G QEF+ ++LA+ CGF P +LA++LFYLER
Sbjct: 416 APYVAGNPQTDKDGRVLPHTADQQAAPINGSNQEFSLDYLALACGFCPQILARLLFYLER 475
Query: 472 CDGAVIVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARG 531
CD GR E D RY+A++ ++DVPC LC TR AC HTTL RLR R P+F + R
Sbjct: 476 CDAGTFGGRNETDALRYLANTLESDVPCGLCNQATRPACAHTTLHRLRQRLPRFGAPVRA 535
Query: 532 AIGVFGTMNSMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQY 591
IG+FGTMNS YSDCDVLGNYA++ ALKR + +E ++IMQ+TYRA ER++ ELE +
Sbjct: 536 PIGIFGTMNSAYSDCDVLGNYASYGALKRPNDNEAPKSIMQDTYRATMERLVNELEQAKL 595
Query: 592 VDQ---AVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLG 648
+D+ A + +++ ++ + +++N++ ++ EQ MR LVE R+FK R+GL
Sbjct: 596 IDKETLAQASPCSAPTSVVHDQASFIGLLSNIKDTIEGAAEQFMRTLVEARDFKIREGLA 655
Query: 649 EANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQ 708
+ANH MS++LDPY+ CP+ L RR+ AV QDL LSQCH +F GQSVEGRNFRNQFQ
Sbjct: 656 DANHTMSISLDPYSSSFCPVTSFLARRTVFAVLQDLVLSQCHCLFYGQSVEGRNFRNQFQ 715
Query: 709 PVLRRRVMDMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFP 768
PVLRRR +DM N GF++AKT+TV +S+ + + AP LT + P ++GD+ARV++
Sbjct: 716 PVLRRRFLDMLNGGFITAKTVTVTVSD-SGVLAPDLTRPASEPPTKDYDGDMARVSMEVL 774
Query: 769 KELRVKSRVLFAGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFP 828
++LRVK+RVLF+ AN SEAA+ARVA + SAY++PDK +IL G +GFL+KQ+H +FP
Sbjct: 775 RDLRVKNRVLFSNGGANMSEAARARVAGMASAYRRPDKGSNILNGAVGFLVKQYHGVLFP 834
Query: 829 NGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNV 888
G PPG + PNPQWFWT LQRNQ+PARLLS+EDIETI IK+FS +Y AINFINL PNN+
Sbjct: 835 RGHPPGIDTPNPQWFWTLLQRNQMPARLLSKEDIETITAIKRFSDEYSAINFINLTPNNI 894
Query: 889 SELAMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAW---SAQGGAGLEAGA 945
ELA +Y AN +L+YCDHS YFIN LTAI+ GSRRP A AW + G A +E A
Sbjct: 895 GELAQFYFANLVLKYCDHSQYFINGLTAIVVGSRRPRDPAAVLAWIDRTINGAADVEPAA 954
Query: 946 RALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWAS 1005
+ ++ + ++P AWT F S N++R VM RPMVV+GLSISKY G AGN+RVFQAGNW
Sbjct: 955 QEVLQRLGSNPAAWTGTFTSTNMVRYVMDQRPMVVIGLSISKYNGSAGNNRVFQAGNWNG 1014
Query: 1006 LMGGKNACPLLIFDRTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVA 1065
L GGKN CPL+ FDRTR+FVLACPR GF C A G G E++L EQ+RGI+SEGG V
Sbjct: 1015 LNGGKNVCPLMAFDRTRRFVLACPRVGFTCEAGGFGTGVRENTLSEQVRGIVSEGGPMVQ 1074
Query: 1066 SSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVA 1125
++VF A + +LG RTQ L ++DW+ L++DE+L+ + L A +++ GEWS +AA E+
Sbjct: 1075 TAVFAAVLHALGARTQHLAVDDWIGLVDDEFLAASLDALNATVVDQ-FGEWSVEAAQELV 1133
Query: 1126 H--EAEALVSQLGNAGEVFNFGDFGCEDD----NATPFGGPGAPGPAFAGRKRAFHGDDP 1179
EA+ + F+FG C D + + F G A A AG+KR+ D
Sbjct: 1134 KNMEAQTTAGAVAAGEGAFDFG--ACVGDTPQQSTSAFNGGLAMAAAPAGQKRSLPDDIL 1191
Query: 1180 FGEG-PPDKKGDLTLDML 1196
F G PP+KK LT DML
Sbjct: 1192 FDMGAPPEKKSGLTFDML 1209
>gi|9629757|ref|NP_045248.1| 31 [Equine herpesvirus 4]
gi|11278307|pir||T42574 DNA-binding protein - equine herpesvirus 4
(strain NS80567)
gi|2605975|gb|AAC59547.1| 31 [Equine herpesvirus 4]
Length = 1208
Score = 1237 bits (3201), Expect = 0.0
Identities = 633/1215 (52%), Positives = 839/1215 (68%), Gaps = 26/1215 (2%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
ME+ PKT + +P PLGYVYA E L L++ARS DSD+AV P++ GLTVE
Sbjct: 1 MESAPKT---VSLPVSPLGYVYAIQNTFMETEALTLMAARSIDSDLAVLPVIRGLTVEQT 57
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
F NVAVV GS+TTGLGG ++LKLTPSH++ + +VF+GG S++APNLTR CE AR
Sbjct: 58 FTTNVAVVAGSKTTGLGGAGITLKLTPSHFTPNAFVFYGGSVFGASSKAPNLTRACELAR 117
Query: 121 RHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGG 180
R FGFS ++ P D ET+GE +C L L P+ LYLVVTE FKE V + NTFLH GG
Sbjct: 118 RRFGFSPFSSPPVDNAVETSGEEICASLNLSPETTTLYLVVTETFKEMVYMCNTFLHYGG 177
Query: 181 SDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLL 240
+ VTI G E +IP+YP+QL+MPD +R+ AEPFN+ HRSIG++F Y PFFN L RLL
Sbjct: 178 TSTVTIHGQEAVKIPIYPVQLYMPDVNRLAAEPFNSKHRSIGDEFVYSKPFFNSDLCRLL 237
Query: 241 FEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRG-GR 299
V+GPAAVALR RN+D VAR AAHLA DENHEG+ LP D+TFT F+++QG + +G GR
Sbjct: 238 HGYVLGPAAVALRVRNLDGVARGAAHLALDENHEGSVLPQDVTFTLFDSAQGTSGKGSGR 297
Query: 300 -----DGGG--KGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQD 352
DG G G++ G E+RLAS+MA D AL+++SI+ V+D + P+ D
Sbjct: 298 TQRQGDGSGLKNGSSSGIERRLASIMAADTALSVDSIMGAGVYDTELPSVEDLPILSVGD 357
Query: 353 TAAARANAVGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPG 412
R A+GAY +R +GLVGAMVFS NS L++TEVDD GPAD KD S PS++RF+L+
Sbjct: 358 D-RERLEALGAYASRLSGLVGAMVFSANSVLYMTEVDDGGPADGKDASNPSYHRFYLIAA 416
Query: 413 THVAANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERC 472
+VA NPQ D++G V+ +P AP+ G QEF+ ++LA+ CGF P LLA++LFYLERC
Sbjct: 417 PYVAGNPQTDKDGRVLQHTADQPAAPINGSNQEFSLDYLALACGFCPQLLARILFYLERC 476
Query: 473 DGAVIVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGA 532
D GR E D RY+A++ +++VPC LCT TR AC HTTL RLR R P+F + R
Sbjct: 477 DAGTFGGRNETDALRYLANTLESEVPCGLCTPATRPACAHTTLHRLRQRLPRFGTPVRAP 536
Query: 533 IGVFGTMNSMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYV 592
IG+FGTMNS YSDCDVLGNYA++ ALKR + +E ++IMQ+TYRA ER++ +LE + +
Sbjct: 537 IGIFGTMNSTYSDCDVLGNYASYGALKRPNDNEAPKSIMQDTYRATMERLVNDLEQAKLI 596
Query: 593 DQAVPTAMGRLET---IITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGE 649
D+ G ++ ++ + +++ ++ + + EQ MR LVE R+FK R+GL +
Sbjct: 597 DKEALAHAGTCSASTGVVKDQASFINLLSTIKDITEGAAEQFMRTLVEVRDFKIREGLAD 656
Query: 650 ANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQP 709
ANH MS++LDPY+ CP+ L RR+ AV QDL LSQCH +F GQSVEGRNFRNQFQP
Sbjct: 657 ANHTMSISLDPYSSSFCPVTSFLSRRTIFAVLQDLVLSQCHCLFYGQSVEGRNFRNQFQP 716
Query: 710 VLRRRVMDMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPK 769
VLRRR +DM N GF++AKT+TV +S+ + + AP+LT + P ++GD+ARV++ +
Sbjct: 717 VLRRRFLDMLNGGFITAKTVTVTVSD-SGVTAPNLTLPSSEPPTKDYDGDMARVSMEVLR 775
Query: 770 ELRVKSRVLFAGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPN 829
+LR+K+RVLF+ AN SEAA+ARVA + SAY++P+K +IL G +GFL+KQFH +FP
Sbjct: 776 DLRIKNRVLFSNGGANMSEAARARVAGMASAYRRPEKGSNILNGAVGFLVKQFHKVLFPR 835
Query: 830 GKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVS 889
G PPG + PNPQWFWT LQRNQ+PARLLS+EDIETI IK+FS +Y AINFINL PNN+
Sbjct: 836 GHPPGIDTPNPQWFWTLLQRNQMPARLLSKEDIETITAIKRFSHEYSAINFINLTPNNIG 895
Query: 890 ELAMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAW---SAQGGAGLEAGAR 946
ELA +Y AN +L+YCDHS YFIN LTAI+ GSRRP A AW + G + +E A+
Sbjct: 896 ELAQFYFANLVLKYCDHSQYFINGLTAIVVGSRRPRDPAAVLAWINRTINGASDVEPAAQ 955
Query: 947 ALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASL 1006
++ + ++P AWT FAS N++R VM RPMVV+GLSISKY G AGN+RVFQAGNW L
Sbjct: 956 EVLQQLGSNPAAWTGTFASTNMVRYVMDQRPMVVIGLSISKYNGSAGNNRVFQAGNWNGL 1015
Query: 1007 MGGKNACPLLIFDRTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVAS 1066
GGKN CPL+ FDRTR+FVLACPR GF C A G GA E++L EQ+R I+S+GG V +
Sbjct: 1016 NGGKNVCPLMAFDRTRRFVLACPRVGFTCEAGGFGMGARENTLSEQIRSIVSDGGPMVQT 1075
Query: 1067 SVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAH 1126
+VF + +LG RTQ L ++DW+ L++DE+L+ + L A +++ GEWS +AA ++
Sbjct: 1076 AVFSVVLTALGARTQHLAVDDWIGLVDDEFLAASLDALNAAVVDQ-FGEWSVEAAQDMIR 1134
Query: 1127 --EAEALVSQLGNAGEVFNFGD-FGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGE- 1182
+A+ + + F+FG G + ++T F A A AG+KR FH DD +
Sbjct: 1135 TMDAQTNMGVVSTGDGAFDFGACVGDANQSSTTFNMGPASSSAPAGQKR-FHPDDILFDM 1193
Query: 1183 -GPPDKKGDLTLDML 1196
PP+KK LT DML
Sbjct: 1194 GAPPEKKSGLTFDML 1208
>gi|9629845|ref|NP_045329.1| major DNA binding protein [Bovine
herpesvirus 1]
gi|1150923|emb|CAA64336.1| major DNA binding protein [Bovine
herpesvirus 1]
gi|1491628|emb|CAB01596.1| UL29 [Bovine herpesvirus 1]
gi|2653318|emb|CAA06104.1| major DNA binding protein [Bovine
herpesvirus type 1.1 (strain Cooper)]
Length = 1203
Score = 1234 bits (3194), Expect = 0.0
Identities = 642/1203 (53%), Positives = 819/1203 (67%), Gaps = 18/1203 (1%)
Query: 8 ATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAV 67
A T+ + PGP G+VY ++ LALL+ARS DS +AV PLV GLTVE+ F NVAV
Sbjct: 5 AKTVALAPGPAGFVYVCDAARLDLDKLALLAARSRDSLLAVLPLVRGLTVETAFAPNVAV 64
Query: 68 VVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSD 127
V G++TTGLGG ++ KLTPSHY +V+VFHGG L ST APNLTR CE+ARR FGFS
Sbjct: 65 VAGTKTTGLGGAGLTAKLTPSHYHPNVFVFHGGERLRASTAAPNLTRACEQARRRFGFSA 124
Query: 128 YTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIG 187
+ P D ETT E +C +G P+ AL++L TE FKE V + NTFLH GG+ V +G
Sbjct: 125 FAGAPVDGAVETTAEDICRAVGASPETALVFLATTEAFKETVYMCNTFLHYGGAAPVQVG 184
Query: 188 GAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGP 247
E R+P+YP+QL+MPD +RV EPFNA R+IGE+ YP PF+N L LL V+GP
Sbjct: 185 AGEAVRVPLYPVQLYMPDVNRVNLEPFNARQRAIGEQLAYPRPFYNAALCELLHGYVLGP 244
Query: 248 AAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGK-----TPRGGRDGG 302
AAVALR R +DAVAR AAHLAFDE+HEGA LP D+ FT F+ G+ + RG G
Sbjct: 245 AAVALRVRTLDAVARGAAHLAFDESHEGAVLPPDVCFTVFDQPAGRGGGRGSARGADPGA 304
Query: 303 GKGAA-GGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANAV 361
K AA GG E+RLASVMA D A+++E+ +S +VFDE + WP+ +G AA+ +A+
Sbjct: 305 AKAAAPGGVERRLASVMAADTAVSIEAAMSTSVFDEDVACVDDWPMLQGAADDAAKLDAL 364
Query: 362 GAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQV 421
GAY+ R AGLVGAMVFS+NS LH+TEVDD G AD KD + F+RF+ + + A NP+
Sbjct: 365 GAYVGRLAGLVGAMVFSSNSVLHMTEVDDGGAADAKDGAAAGFHRFYQIAAPYAAGNPRC 424
Query: 422 DREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQ 481
D++G +P P + G QEFA +HLA+ CGF P LLA+MLFYLERCD GR
Sbjct: 425 DKDGKPLPQTGAGPAVSINGAGQEFALDHLALACGFCPQLLARMLFYLERCDAGAFAGRN 484
Query: 482 EMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNS 541
+MD +YVA + + DVPC LC+ D RHAC HTTL RLR R P+F + R +GVFGTMNS
Sbjct: 485 DMDALKYVASTLEGDVPCGLCSRDDRHACAHTTLHRLRHRLPRFGAPTRSPLGVFGTMNS 544
Query: 542 MYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMG 601
YSDCDVLGNYA++SAL+R E AR+IMQ TYRAA E V+AEL+ + + +A
Sbjct: 545 AYSDCDVLGNYASYSALRRPGADENARSIMQATYRAAVENVLAELDQQRLLAHDAQSA-A 603
Query: 602 RLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPY 661
+LE IT+ + + ++ V++ E +R LVE R+FK R+ L EANH +SL LDPY
Sbjct: 604 QLERAITDHASFRGALAAIQNTVEQATEAFVRGLVEDRDFKMREALYEANHTLSLALDPY 663
Query: 662 ACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFNN 721
+ CP L RRS LAV QDLALSQCHG+F GQ V+GRNFR QFQPVLRRR MD+ N
Sbjct: 664 STAVCPATAFLFRRSVLAVVQDLALSQCHGIFCGQPVDGRNFRAQFQPVLRRRFMDLLNG 723
Query: 722 GFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFAG 781
GFL+ +T+TV L+E AA+ AP+L A QT P +GD+++V+L KE+RVK+RV+F+
Sbjct: 724 GFLTTRTVTVTLAE-AAVAAPNLAAAQTEPPARDMDGDISKVSLEVFKEMRVKNRVMFSA 782
Query: 782 ASANASEAAKARVASLQSAYQKPDK-RVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNP 840
+AN SEAA+ARV L AYQKP+ V+IL GPLGFL+KQFH +FPNGKPPGS PNP
Sbjct: 783 GNANMSEAARARVLGLAGAYQKPESGGVNILSGPLGFLVKQFHRKLFPNGKPPGSPTPNP 842
Query: 841 QWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI 900
QWFWT LQRNQ+PARLLS+EDIETI +K+FS Y AIN++NL P NV+ELA +YMAN +
Sbjct: 843 QWFWTLLQRNQMPARLLSKEDIETIGAVKRFSDAYAAINYVNLTPGNVAELAQFYMANLV 902
Query: 901 LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQ---GGAGLEAGARALMDAVDAHPG 957
LR+CDH ++IN LTAI+AG+RRP A W + A A ++ +A P
Sbjct: 903 LRHCDHKQFYINGLTAIVAGARRPRDPAAVMHWVRRRIADAPDAAAAAEEVLREAEARPE 962
Query: 958 AWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLI 1017
W FA+ NL+R VMA RP VVLGLSISKY G AGN+RVFQAGNW+ L GGKN CPLL
Sbjct: 963 VWAGTFAASNLVRSVMATRPAVVLGLSISKYNGSAGNNRVFQAGNWSGLNGGKNVCPLLC 1022
Query: 1018 FDRTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIIS-EGGAAVASSVFVATVKSL 1076
FD+TR+FVLACPRAGFVCA + GG +++L E LR II+ GA ++V+ A +++L
Sbjct: 1023 FDKTRRFVLACPRAGFVCATAGAGGANRDNTLVEALREIINGSNGALAQTAVYGAVLQAL 1082
Query: 1077 GPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAE-ALVSQL 1135
GPR + + ++DW AL+EDE+ ++ M+ELT RA R G WS + A ++ E E ++
Sbjct: 1083 GPRVEHMDLDDWAALVEDEFFAQSMVELTERAAARPGG-WSPEGAADMLRELELEAAAEA 1141
Query: 1136 GNAGEVFNFGDFGCEDDNAT-PFGGPGA-PGPAFAGRKRAFHGDDPFGEGPPDKKGDLTL 1193
AG F+FG +AT FGGP A GPA G KR D+ F G PDK+ LT+
Sbjct: 1142 EPAGGAFDFGACASAAPDATYAFGGPVAGAGPAAPGAKRP-DLDELFEMGVPDKRPALTI 1200
Query: 1194 DML 1196
DM+
Sbjct: 1201 DMV 1203
>gi|3721984|gb|AAC63429.1| DNA-binding protein [Pseudorabies virus]
Length = 1177
Score = 1187 bits (3072), Expect = 0.0
Identities = 636/1206 (52%), Positives = 811/1206 (66%), Gaps = 50/1206 (4%)
Query: 8 ATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAV 67
A T+ V PLGYVY + +LLALL ARS D AVAPLV GLTVE+GF +VAV
Sbjct: 5 AKTVTVRAAPLGYVYVTPIEALRRDLLALLVARSADDAAAVAPLVRGLTVEAGFAGHVAV 64
Query: 68 VVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSD 127
V G+RTTGLGG ++LKLTP+H+ +V+ FH G + PS+ AP L+R CE AR FGFS
Sbjct: 65 VAGARTTGLGG-GLTLKLTPNHFHPNVFFFHNGDCVPPSSAAPALSRACEAARARFGFSA 123
Query: 128 YTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIG 187
Y P D ETTG +C RLGL D YLVV +GFKEAV + N FLH GG+ V+I
Sbjct: 124 YRT-PVDNAEETTGAEVCARLGLAADAHAAYLVVADGFKEAVYLCNAFLHYGGAGTVSIN 182
Query: 188 GAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGP 247
G E R+P+YP+ LFMPD +R++A+PFNA +RSI E+F YP PFFN PL RLL V+GP
Sbjct: 183 GHEAWRVPLYPVHLFMPDVNRLVADPFNAKNRSISEEFVYPRPFFNGPLCRLLHGYVLGP 242
Query: 248 AAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAA 307
AAVA R RN+DAVAR AAHLAFDENHE A LPAD+TFT FE R GG AA
Sbjct: 243 AAVATRVRNLDAVARGAAHLAFDENHESAVLPADVTFTLFEQ---------RRRGGDAAA 293
Query: 308 GGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFE---GQDTAAARANA---- 360
GG E+R+ASVM+ DAAL+LE++V+ V+DE P + WP+ +D AA A+A
Sbjct: 294 GGLERRMASVMSADAALSLEALVAAGVYDEEPPALDDWPVLSEAGAKDGGAAAASAGAPV 353
Query: 361 -----VGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADP-KDHSKPSFYRFFLVPGTH 414
+GAY++RAAGLVGA+VFS+NS L+LTEVDDAG AD K+ + PSF RF+ V +
Sbjct: 354 SQAAALGAYVSRAAGLVGALVFSSNSVLYLTEVDDAGAADARKEGAGPSFNRFYQVAAPY 413
Query: 415 VAANPQVDREGHVVPGFEGRP-TAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCD 473
+A NPQ D++G V+ +P TAP G +FA +HL M CGF P LLA++LFYLERCD
Sbjct: 414 LAGNPQTDKDGRVLLHTASQPATAP---GNHDFAMDHLVMACGFCPQLLARVLFYLERCD 470
Query: 474 GAVIVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAI 533
VGR ++D RYVA S +VPC+LC +R AC HTTL RLR R + ++ R +
Sbjct: 471 AGTFVGRGDVDAVRYVAGSLDAEVPCSLCDRASRPACAHTTLHRLRHRS-RASARRRSPM 529
Query: 534 GVFGTMNSMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVD 593
GVFGTMNS YSDCDVLGNYA++ ALKR + SE + IMQ+TYRAA +R++A++
Sbjct: 530 GVFGTMNSAYSDCDVLGNYASYGALKRPNDSEPPKAIMQDTYRAAVDRLLADV------- 582
Query: 594 QAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHA 653
A R+ +T+ + +R V++ ++ +R LVE R+FK RD L +ANH
Sbjct: 583 -----AGARIGETVTDHAGFRHALRALRDTVEQAADRFVRTLVETRDFKLRDALYDANHT 637
Query: 654 MSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRR 713
MSL+LDPY+ CP L RR+ LAV QDLALSQCHGV GQ VEGRNFRNQFQPVLRR
Sbjct: 638 MSLSLDPYSGALCPATSFLARRTLLAVLQDLALSQCHGVLHGQPVEGRNFRNQFQPVLRR 697
Query: 714 RVMDMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRV 773
RV+DM N GF++AKT+TV L++G I AP T G P +GD+ARV+ +ELRV
Sbjct: 698 RVVDMLNGGFVTAKTVTVTLADG--IVAPDPTKGSAEPPARDHDGDLARVSFEVLRELRV 755
Query: 774 KSRVLFAGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPP 833
KSRV+F+ S + S+AA+ARVA L AYQ+PD VD+L GPLGFLLKQ HA +FP GKPP
Sbjct: 756 KSRVMFSTGSGSLSDAARARVAGLAGAYQRPDTAVDVLNGPLGFLLKQHHATLFPRGKPP 815
Query: 834 GSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAM 893
G PNPQWFWT LQRNQLPARLL+++DIETIA +K+FS+DYGAIN++NL P V+ELA
Sbjct: 816 GGQSPNPQWFWTLLQRNQLPARLLTKDDIETIAAVKRFSVDYGAINYVNLTPGTVAELAQ 875
Query: 894 YYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVD 953
+Y+AN ILRYCDH +FIN+LT I S+RP A AW + A RA + +D
Sbjct: 876 FYLANLILRYCDHKQFFINSLTGITMQSKRPRDPAAVMAWVRRPLADAADAERAAREVLD 935
Query: 954 A-HPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNA 1012
A W + + S +LLR VMA+RP+VVLGL +SKY+GMAGN+RVFQAGNW+ L GGK+
Sbjct: 936 APRDDTWVATYTSSHLLRSVMASRPLVVLGLGVSKYHGMAGNNRVFQAGNWSGLNGGKHV 995
Query: 1013 CPLLIFDRTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVAT 1072
CPL++FDRTR FVLACPR GF C+ + G G H+ SL E ++ I+++GG V ++V+ A
Sbjct: 996 CPLMVFDRTRHFVLACPRVGFTCSQTGGGAGLHDHSLGEHVKTILADGGPLVQTAVYAAV 1055
Query: 1073 VKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALV 1132
+ +LG RTQ L+ +DW A+++DE+L+ + E+ R +R +G WS +AA E+ + E
Sbjct: 1056 LHALGARTQHLEPDDWRAIVDDEFLAAALAEINGRVADR-DGRWSVEAAAELVRDLEGQT 1114
Query: 1133 SQLGNAGE-VFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGEG-PPDKKGD 1190
G E F+FG G D P + PA G KR DD F G PP+K+
Sbjct: 1115 GADGGGEETAFDFGACGAGGDAGAGL-APASLAPAELGGKRPPPEDDLFDMGAPPEKR-- 1171
Query: 1191 LTLDML 1196
LT DML
Sbjct: 1172 LTFDML 1177
>gi|9625904|ref|NP_040152.1| single stranded DNA binding protein
[Human herpesvirus 3]
gi|118758|sp|P09246|DNBI_VZVD Major DNA-binding protein
gi|74044|pir||DNBE29 DNA-binding protein - human herpesvirus 3
gi|60018|emb|CAA27912.1| unnamed protein product [Human herpesvirus
3]
Length = 1204
Score = 1165 bits (3014), Expect = 0.0
Identities = 603/1215 (49%), Positives = 801/1215 (65%), Gaps = 39/1215 (3%)
Query: 7 TATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVA 66
T T+ VP GPLGYVYA +E ++ L+ARS DSD+A+ PL+ LTVE F +++A
Sbjct: 4 TQKTVTVPTGPLGYVYACRVEDLDLEEISFLAARSTDSDLALLPLMRNLTVEKTFTSSLA 63
Query: 67 VVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFS 126
VV G+RTTGL G ++LKLT SH+ SV+VFHGG+H+ PS+ APNLTR C AR FGFS
Sbjct: 64 VVSGARTTGLAGAGITLKLTTSHFYPSVFVFHGGKHVLPSSAAPNLTRACNAARERFGFS 123
Query: 127 DYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTI 186
P D ETTG +C RLGL+P+ +LYLVVT FKEAV + N FLH GG D V I
Sbjct: 124 RCQGPPVDGAVETTGAEICTRLGLEPENTILYLVVTALFKEAVFMCNVFLHYGGLDIVHI 183
Query: 187 GGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVG 246
+V RIP++P+QLFMPD +R++ +PFN +HRSIGE F YP PF+N L L+ + V+
Sbjct: 184 NHGDVIRIPLFPVQLFMPDVNRLVPDPFNTHHRSIGEGFVYPTPFYNTGLCHLIHDCVIA 243
Query: 247 PAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQG--KTPRGGR----- 299
P AVALR RNV AVAR AAHLAFDENHEGA LP DIT+T F++S T RG R
Sbjct: 244 PMAVALRVRNVTAVARGAAHLAFDENHEGAVLPPDITYTYFQSSSSGTTTARGARRNDVN 303
Query: 300 DGGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARAN 359
+GGFE+RLAS+MA D AL E I + +++E PTDI WP+F G + R N
Sbjct: 304 STSKPSPSGGFERRLASIMAADTALHAEVIFNTGIYEETPTDIKEWPMFIGMEGTLPRLN 363
Query: 360 AVGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSK-PSFYRFFLVPGTHVAAN 418
A+G+Y AR AG++GAMVFS NSAL+LTEV+D+G + KD PSF RF+ G H+AAN
Sbjct: 364 ALGSYTARVAGVIGAMVFSPNSALYLTEVEDSGMTEAKDGGPGPSFNRFYQFAGPHLAAN 423
Query: 419 PQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIV 478
PQ DR+GHV+ + EF+ ++LA++CGF LLA++LFYLERCD
Sbjct: 424 PQTDRDGHVL------SSQSTGSSNTEFSVDYLALICGFGAPLLARLLFYLERCDAGAFT 477
Query: 479 GRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGT 538
G D +YV + +++PC+LC TR C HTT+ RLR R P+F A R IGVFGT
Sbjct: 478 GGHG-DALKYVTGTFDSEIPCSLCEKHTRPVCAHTTVHRLRQRMPRFGQATRQPIGVFGT 536
Query: 539 MNSMYSDCDVLGNYAAFSALKR-ADGSETARTIMQETYRAATERVMAELETLQYVDQAVP 597
MNS YSDCD LGNYA + L++ D +E A+ MQ+TYRA ER+ +LE + +D+ P
Sbjct: 537 MNSQYSDCDPLGNYAPYLILRKPGDQTEAAKATMQDTYRATLERLFIDLEQERLLDRGAP 596
Query: 598 TAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLT 657
+ L ++I + +++ +R +++ Q M+ LVE R++K R+GL EA H+M+LT
Sbjct: 597 CSSEGLSSVIVDHPTFRRILDTLRARIEQTTTQFMKVLVETRDYKIREGLSEATHSMALT 656
Query: 658 LDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMD 717
DPY+ CP+ L +R++LAV QDLALSQCH VF GQ VEGRNFRNQFQPVLRRR +D
Sbjct: 657 FDPYSGAFCPITNFLVKRTHLAVVQDLALSQCHCVFYGQQVEGRNFRNQFQPVLRRRFVD 716
Query: 718 MFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRV 777
+FN GF+S +++TV LSEG + AP+ T GQ APA +F+GD+ARV++ +++RVK+RV
Sbjct: 717 LFNGGFISTRSITVTLSEG-PVSAPNPTLGQDAPAGRTFDGDLARVSVEVIRDIRVKNRV 775
Query: 778 LFAGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQ 837
+F+G N SEAA+AR+ L SAYQ+ +KRVD+L G LGFLLKQFH +FP G PP S
Sbjct: 776 VFSGNCTNLSEAARARLVGLASAYQRQEKRVDMLHGALGFLLKQFHGLLFPRGMPPNSKS 835
Query: 838 PNPQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMA 897
PNPQWFWT LQRNQ+PA L+ E+I TIA +K+F+ +Y AINFINL P + ELA +YMA
Sbjct: 836 PNPQWFWTLLQRNQMPADKLTHEEITTIAAVKRFTEEYAAINFINLPPTCIGELAQFYMA 895
Query: 898 NQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAW---SAQGGAGLEAGARALMDAVDA 954
N IL+YCDHS Y INTLT+II G+RRP + W A +E A+AL++ +
Sbjct: 896 NLILKYCDHSQYLINTLTSIITGARRPRDPSSVLHWIRKDVTSAADIETQAKALLEKTEN 955
Query: 955 HPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACP 1014
P WT+ F S +L+R M RPMVVLG+SISKY+G AGN+RVFQAGNW+ L GGKN CP
Sbjct: 956 LPELWTTAFTSTHLVRAAMNQRPMVVLGISISKYHGAAGNNRVFQAGNWSGLNGGKNVCP 1015
Query: 1015 LLIFDRTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVK 1074
L FDRTR+F++ACPR GF+C + G E++L +Q+RGII GGA V +++ V+
Sbjct: 1016 LFTFDRTRRFIIACPRGGFICPVTGPSSGNRETTLSDQVRGIIVSGGAMVQLAIYATVVR 1075
Query: 1075 SLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQ 1134
++G R Q + +DWL+L +DE+L+ ++ EL + ++ W+ + AL EA ++ +
Sbjct: 1076 AVGARAQHMAFDDWLSLTDDEFLARDLEELHDQIIQTLETPWTVEGAL----EAVKILDE 1131
Query: 1135 LGNAGE-------VFNFGDFGCE-----DDNATPFGGPGAPGPAFAGRKRAFHGDDPFG- 1181
AG+ FNF CE N G G G KR D+ F
Sbjct: 1132 KTTAGDGETPTNLAFNFD--SCEPSHDTTSNVLNISGSNISGSTVPGLKRPPEDDELFDL 1189
Query: 1182 EGPPDKKGDLTLDML 1196
G P K G++T++M+
Sbjct: 1190 SGIPIKHGNITMEMI 1204
>gi|13242421|ref|NP_077444.1| ssDNA binding protein [Cercopithecine
herpesvirus 7]
gi|11036573|gb|AAG27202.1|AF275348_22 ssDNA binding protein
[Cercopithecine herpesvirus 7]
Length = 1194
Score = 1140 bits (2949), Expect = 0.0
Identities = 607/1208 (50%), Positives = 804/1208 (66%), Gaps = 35/1208 (2%)
Query: 7 TATTIKVPPGPLGYVYARACPSEGIEL--LALLSARSGDSDVAVAPLVVGLTVESGFEAN 64
T TI VP GPLGYVYA C E ++L ++LLSARS DSD+A+ PL+ LTVE F ++
Sbjct: 4 TQKTITVPTGPLGYVYA--CNKEDLDLPEISLLSARSIDSDLALIPLIRNLTVEKSFTSS 61
Query: 65 VAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFG 124
+AVV G++TTGL G V+LKL SHY + +VFHGG H+ PS+ +PNLT+ C AR FG
Sbjct: 62 LAVVSGTKTTGLAGAGVTLKLITSHYYPTAFVFHGGHHISPSSFSPNLTQACNTARERFG 121
Query: 125 FSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKV 184
F + P D ETTG +C R+ L+P+ A LYL+VT FKEAV + N+FL+ GG D V
Sbjct: 122 FMNKRGSPVDGAIETTGADICNRIHLNPEHAFLYLIVTSLFKEAVYMCNSFLYYGGIDNV 181
Query: 185 TIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAV 244
IG A V RIP++P+ +FMPD +R++ +PFNA RSIGE F YP P FN + LL++ V
Sbjct: 182 RIGRATVTRIPLFPIHVFMPDVNRLVTDPFNATQRSIGENFVYPTPLFNGNICNLLYDCV 241
Query: 245 VGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKT--PRGGRDGG 302
+ P AV+LR RNV AVAR AAHLAFDENHEGA LP+DIT+T+F+++ + PR R
Sbjct: 242 ISPIAVSLRIRNVVAVARGAAHLAFDENHEGAVLPSDITYTSFQSTSNGSVNPRLPRQNT 301
Query: 303 GKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANAVG 362
K + GFE+RLAS+M D AL E I S V+DE P+DI+ WP+ G D R N +G
Sbjct: 302 SKSSQTGFERRLASIMTADTALQAEVIFSSGVYDEAPSDITEWPMLIGTDNVTERLNILG 361
Query: 363 AYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSK-PSFYRFFLVPGTHVAANPQV 421
+Y+AR +G V AMVFS NS L+LTE++D G ++ KD PSF RF+ G H+AANPQV
Sbjct: 362 SYVARISGTVAAMVFSPNSVLYLTEIEDGGVSEGKDGGPGPSFNRFYQFAGPHLAANPQV 421
Query: 422 DREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQ 481
DR+G VV F G + EF + LA++CGFSP LLA++LFYLERCD G
Sbjct: 422 DRDGCVV--FSGNTGSV----NTEFNVDILALVCGFSPQLLARLLFYLERCDAGTFSGGH 475
Query: 482 EMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNS 541
D +YV + +D+PC+LC TRH CVHTT+ RL+ R P+F +R IGVFG MNS
Sbjct: 476 S-DALQYVMSTFNSDIPCSLCERHTRHLCVHTTIQRLKQRMPRFGPPSRQPIGVFGIMNS 534
Query: 542 MYSDCDVLGNYAAFSALKR-ADGSETARTIMQETYRAATERVMAELETLQYVDQAVP-TA 599
YSDCD LGNYA + L++ D +ETA++ MQ+TYRA ER+ ++LE D++ P ++
Sbjct: 535 QYSDCDPLGNYAPYLILRKPGDQTETAKSTMQDTYRATLERLFSDLEQENLFDRSSPFSS 594
Query: 600 MGRLETII---TNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSL 656
G TII T R AL V+Q+ EQ ++ LVE R++K R+GL EA H++S+
Sbjct: 595 EGLNSTIIDHATFRRALEVFKTRVQQI----TEQFIKVLVETRDYKIREGLTEATHSLSI 650
Query: 657 TLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVM 716
T DPY+ CP+ L +R+NLAV QDL LSQCHGVF GQ VEGRNFRNQFQPVLRRR +
Sbjct: 651 TADPYSGSICPITYFLVKRTNLAVIQDLILSQCHGVFHGQQVEGRNFRNQFQPVLRRRFI 710
Query: 717 DMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSR 776
D+FN GFLS + +TV L EG I AP T GQ APA +F+GD+ +V++ ++LRVK+R
Sbjct: 711 DLFNGGFLSTRPVTVTLPEG-PIIAPDPTLGQEAPA-CTFDGDLTKVSVDVIRDLRVKNR 768
Query: 777 VLFAGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSN 836
V+F+G+ N SEAA+AR+ L SAYQ+ +KRVD+L G LGFLLKQFH+ +FP G PP +
Sbjct: 769 VVFSGSCTNLSEAARARLIGLASAYQRQNKRVDMLHGALGFLLKQFHSVLFPRGIPPNAK 828
Query: 837 QPNPQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYM 896
PNPQWFW LQRNQ+PA L+ E+I TIA K+F+ +Y AINFIN+AP + ELA +YM
Sbjct: 829 SPNPQWFWALLQRNQMPADNLTSEEINTIAIAKRFTEEYEAINFINIAPTCIGELAQFYM 888
Query: 897 ANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAW---SAQGGAGLEAGARALM-DAV 952
AN IL+YCDHS YFINTLTA+I GS+RP + +A W LE AR L+ +
Sbjct: 889 ANLILKYCDHSQYFINTLTAVITGSKRPHNPSSALHWIDKEITTPTDLETHARLLIRNTE 948
Query: 953 DAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNA 1012
P W S F S NL+R VM RP+VVLG+SISKYYG AGN+RVFQAGNW+ L GGKN
Sbjct: 949 QMSPYMWISSFMSTNLVRAVMNQRPIVVLGISISKYYGAAGNNRVFQAGNWSGLNGGKNV 1008
Query: 1013 CPLLIFDRTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVAT 1072
CPL + DRTR+FV+ACPR GFVC+ + G+ E++L +Q+R +I+ GGA V +V+
Sbjct: 1009 CPLFVIDRTRRFVIACPRGGFVCSIGNTTPGSRENNLSDQVRNVIAAGGALVQIAVYSTV 1068
Query: 1073 VKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDA---ALEVAHEAE 1129
+++LG R + + +DWL+L +DEYL+ ++ EL + + W++DA AL+ ++
Sbjct: 1069 IRALGDRAEHMGFDDWLSLTDDEYLARDLEELHDQINQTLQTPWNSDAVLEALKALNDGA 1128
Query: 1130 ALVSQLGNAGEV-FNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGEGPPDKK 1188
++++ G + FNF C D N P + P +G KR D F +K
Sbjct: 1129 TVINENSGCGNIAFNFDT--CNDSNTEENHAPPSYQPLCSGVKRPRDDDLLFDMSSLPQK 1186
Query: 1189 GDLTLDML 1196
LT+DM+
Sbjct: 1187 MSLTMDMV 1194
>gi|10180734|gb|AAG14222.1|AF243438_37 UL29 single stranded DNA
binding protein-like protein [Gallid herpesvirus 2]
Length = 1191
Score = 1017 bits (2629), Expect = 0.0
Identities = 518/1145 (45%), Positives = 741/1145 (64%), Gaps = 17/1145 (1%)
Query: 10 TIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVV 69
++K+ GP+GY+YA S ++ LA+L+A+S D D AV PLV GLTVES F NVA V
Sbjct: 7 SVKLCGGPIGYIYATPKCSVPVDELAILAAKSNDCDDAVLPLVAGLTVESDFVWNVAAVA 66
Query: 70 GSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYT 129
G++TTGLG +LKL P+HY V+VF+GG + P T+APNLT+ C+ AR FG+S Y+
Sbjct: 67 GTKTTGLGSGGTTLKLVPTHYHPCVFVFYGGDCIKPCTKAPNLTKACDLARERFGYSAYS 126
Query: 130 PRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGA 189
P ETTG+ +CE L +D +LYLVVTE FKE + + N+FLH GGSD VTI A
Sbjct: 127 S-PAPTAFETTGQQICEALEMDAQNVMLYLVVTELFKEVIYLCNSFLHFGGSDVVTINNA 185
Query: 190 EVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAA 249
+V RIP+YPL L +PDF+R+ EPF+ R++GE P F+N L RLL V+ A
Sbjct: 186 DVRRIPIYPLHLVLPDFNRITNEPFSEKPRALGEGAIMPKAFYNDSLCRLLHGYVLSTTA 245
Query: 250 VALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAF----EASQGKTPRGGRDGGGKG 305
V LR RN+DA+AR AAHL FDENHEG LPAD TFTAF E ++G++ G R+G
Sbjct: 246 VGLRVRNIDAIARGAAHLCFDENHEGTLLPADTTFTAFTPAAETTKGQSKMGKREGSDV- 304
Query: 306 AAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANAVGAYL 365
+ GG+E+R AS+MA DA LA+E+++S +V+++P D++ WP++ A R A+ AY+
Sbjct: 305 SGGGYERRTASLMASDATLAIENVISASVYEDPIPDVNKWPIYCNPVGYADRIEALSAYM 364
Query: 366 ARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHS--KPSFYRFFLVPGTHVAANPQVDR 423
AR AGLVGAMVFS+NS +++TEV +AG + K+ S PSFYRFF + H++ANP VDR
Sbjct: 365 ARVAGLVGAMVFSSNSVIYMTEVGEAGSTEGKETSTTAPSFYRFFQIAAPHLSANPLVDR 424
Query: 424 EGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEM 483
+G V G + E++ ++L + CGF P LLA+ LFYLERCDG ++
Sbjct: 425 DGKPVSG--ENLSKSTSASQSEYSLDYLILACGFCPQLLARFLFYLERCDGGAKACHHDL 482
Query: 484 DVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMY 543
D ++V+ + D+PC LC +R C HTT+ RL R PKF RGA+G+FG M + Y
Sbjct: 483 DTVKFVSSAIDADMPCELCDKTSRIYCAHTTIKRLVYRLPKFGYQMRGAMGLFGAMTNNY 542
Query: 544 SDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRL 603
D + LG+YA FS LKR++G E +R++MQ+TYR ER+M LE + PT M
Sbjct: 543 CDVNALGSYAQFSTLKRSEG-EASRSVMQDTYRLTVERMMKALEKEGLLTCDDPTNMASA 601
Query: 604 ETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYAC 663
+ I + + ++ ++ +++ E QLMRNL E R + R+GLG+ANH +SL ++PYA
Sbjct: 602 DANIRDGNSFIRAISTMKNIIESEASQLMRNLTEIREYNIREGLGDANHTLSLAVEPYAS 661
Query: 664 GPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFNNGF 723
G CP+L L RR+ +AV QD+ALSQC V GQ VE RNFR QFQ VL+RRV+++ N GF
Sbjct: 662 GICPVLAFLSRRTIIAVVQDMALSQCSIVMQGQQVEARNFRTQFQAVLKRRVLELQNAGF 721
Query: 724 LSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFAGAS 783
+++KT+TV L E IC P + Q S+ EGD+ +VT+ +EL+VK++VLF G
Sbjct: 722 ITSKTITVTL-EDQQICVPDPSKSQYDSVISNMEGDLVKVTVEIFRELKVKNKVLFGGGI 780
Query: 784 AN-ASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQW 842
A ASEA K+R+A + AYQ+P K + +L GPLGF +K++H +FP+ K P PN W
Sbjct: 781 AGAASEATKSRLAGMVEAYQRPTKTMHVLNGPLGFAVKRYHTLLFPDVKMPNGATPNALW 840
Query: 843 FWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQILR 902
FW L RNQLPA +LS+E+ + FIKKF+ Y +N+IN++P +LA +Y+AN IL+
Sbjct: 841 FWILLLRNQLPAGILSKEEEDKSLFIKKFTKSYADMNYINISPTCFGDLAQFYLANTILK 900
Query: 903 YCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQ---GGAGLEAGARALMDAVDAHPGAW 959
YC H +FINT++A++A SRRP W + G + A+ L+ ++ H W
Sbjct: 901 YCSHKHFFINTISALVAVSRRPRDPAIVLPWIERPITKGQDVAPAAQQLIASMSDHKDIW 960
Query: 960 TSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFD 1019
+ F+S NL+ +M +P VV+G+SISKY+GMAG+ +VFQ+GNW ++MGG+N C L+ FD
Sbjct: 961 CATFSSTNLVGSIMTTKPFVVIGISISKYHGMAGSTKVFQSGNWGNIMGGRNVCSLMSFD 1020
Query: 1020 RTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPR 1079
RT ++V+ CPR GFV G E++L +++R ++SE AA ++V++ +K +G R
Sbjct: 1021 RTHRYVMTCPRVGFVAEQPIFSSGIKETTLIDRVRMVLSEESAAPHAAVYMLALKMVGDR 1080
Query: 1080 TQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAG 1139
+Q+++EDW+ + DEY+S + EL + +E G W+ DAA+ +A E + + G
Sbjct: 1081 VRQMELEDWMEITNDEYISSLIDELN-KQVEEAEGGWNADAAMTLAKEMVNMAMSIPTDG 1139
Query: 1140 EVFNF 1144
F+F
Sbjct: 1140 PTFDF 1144
>gi|12084858|ref|NP_073323.1| UL29 single stranded DNA binding protein
[Meleagrid herpesvirus 1]
gi|12025141|gb|AAG45767.1|AF291866_34 UL29 single stranded DNA
binding protein [Meleagrid herpesvirus 1]
Length = 1190
Score = 1014 bits (2621), Expect = 0.0
Identities = 515/1148 (44%), Positives = 749/1148 (64%), Gaps = 18/1148 (1%)
Query: 10 TIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVV 69
++K+ GP+GYVY+ + + ++ L+ +A+ DS+ ++ PL+ GLTVES F NVA V
Sbjct: 7 SVKLVGGPIGYVYSMSKDAVPVDELSTFAAKCIDSEESILPLIAGLTVESEFVRNVAAVA 66
Query: 70 GSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYT 129
G++TTGL ++LKL P+HY +V+VF+GG + P ++APNLT+ CE AR FG+ Y+
Sbjct: 67 GTKTTGLVNGGITLKLVPTHYHPNVFVFYGGDCIKPCSKAPNLTKACEYARERFGYCPYS 126
Query: 130 PRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGA 189
PG + ET+G+ +CE+LGLD + +LYLVVTE FKEA+ + N+FL+ GGSD VTI A
Sbjct: 127 A-PGSV--ETSGKQICEQLGLDAQKTMLYLVVTELFKEAIYLCNSFLYYGGSDSVTINDA 183
Query: 190 EVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAA 249
EV RIP+YPL L +PDF+RV EPF+ R++G+ P FFN L RLL+ V+G A
Sbjct: 184 EVRRIPLYPLHLVLPDFNRVSNEPFSERPRALGDGAVMPEAFFNDALCRLLYGYVLGTDA 243
Query: 250 VALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQ---GK-TPRGGRDGGGKG 305
V LR RN+DAVAR AAHL FDENHEG LPAD TFTAF + GK P+ G+ G +
Sbjct: 244 VGLRVRNIDAVARGAAHLCFDENHEGILLPADTTFTAFTPTADTGGKGQPKAGKRDGAET 303
Query: 306 AAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANAVGAYL 365
GG+E+R AS+MA DA LA+E++++ +V++EP D+ WP+F R A+ AY+
Sbjct: 304 QGGGYERRTASLMASDATLAIENVIASSVYEEPIPDVKKWPIFCNPVGYTDRVEALSAYM 363
Query: 366 ARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHS--KPSFYRFFLVPGTHVAANPQVDR 423
R AGLVGAMVFS+NS +++TEV +A +D K+ PSFYRFF + H+AANP VDR
Sbjct: 364 GRVAGLVGAMVFSSNSVIYMTEVGEASSSDGKESGVPAPSFYRFFQIAAPHLAANPLVDR 423
Query: 424 EGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEM 483
+G + G AP + E++ ++L + CGF P LLA+ LFYLERCDG ++
Sbjct: 424 DGKPISGDALPKLAP--STSSEYSLDYLILACGFCPQLLARFLFYLERCDGGANACHHDL 481
Query: 484 DVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMY 543
D + V+ + D+PC LC +R C HTT+ RL R PKF RGA+G+FG M + Y
Sbjct: 482 DTVKLVSSAIDADMPCELCDKTSRVYCAHTTVKRLEYRLPKFGYQMRGAMGLFGAMTNNY 541
Query: 544 SDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRL 603
D + LG+YA FS LKR++G E +R++MQ+TYR ERVM LE + P M
Sbjct: 542 CDVNALGSYAQFSTLKRSEG-EASRSVMQDTYRLTVERVMKALEKEGLLACDDPMNMAPA 600
Query: 604 ETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYAC 663
+ I + + V+ +R +++ E QLMRNL E R + R+GL +ANH +SLT++PY+
Sbjct: 601 DASIKDGPSFIHAVSTMRNIIEGEASQLMRNLTEIREYNIREGLCDANHTLSLTIEPYSS 660
Query: 664 GPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFNNGF 723
G CP+L L RR+ +AV QD+ALSQC + GQ VE RNFR QFQ VLRRRV+++ N GF
Sbjct: 661 GFCPVLSFLARRTTIAVIQDMALSQCSMLMHGQQVEARNFRTQFQSVLRRRVLELQNAGF 720
Query: 724 LSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLF-AGA 782
+++K +T L E + P + Q P + EGD+ RVT+ +EL+VK+RV+F G
Sbjct: 721 ITSKDITATL-EDQHVAVPDPSRSQYDPTVINMEGDLTRVTIEIIRELKVKNRVIFGGGV 779
Query: 783 SANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQW 842
AS+AAK+R+A++ AYQ+P K +++L GPLGF +K++H+A+FPN K P PN W
Sbjct: 780 IGTASDAAKSRLANMIEAYQRPTKTMNVLNGPLGFAIKRYHSALFPNVKMPNGAVPNAHW 839
Query: 843 FWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQILR 902
FWT LQRNQLP +LS+ED E FIKKF+ Y +N+IN++P +LA +++AN IL+
Sbjct: 840 FWTLLQRNQLPDTMLSKEDQEKALFIKKFTNVYADMNYINISPTGFGDLAQFFLANTILK 899
Query: 903 YCDHSTYFINTLTAIIAGSRRPPSVQAAAAW---SAQGGAGLEAGARALMDAVDAHPGAW 959
YC H +FINT++A++A S++P W + G + A+ L+ + AW
Sbjct: 900 YCSHKHFFINTISALVAASKKPRDPAIVLPWIDKTITQGRDVSLAAQQLIGTIADRKDAW 959
Query: 960 TSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFD 1019
+ F++ NL+ VM+ +P++V+G+SISKY+GMAG+ +VFQ+GNW ++MGG+N C L+ FD
Sbjct: 960 CATFSATNLVGSVMSTKPLIVIGVSISKYHGMAGSTKVFQSGNWGNIMGGRNVCSLMSFD 1019
Query: 1020 RTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPR 1079
RT ++V+ACPR GFV + G E++L ++ R I+SE G A + V++ +K +G R
Sbjct: 1020 RTHRYVMACPRVGFVAEHTGFSSGLKEATLMDRARAILSEEGGAPHAEVYMLALKMVGER 1079
Query: 1080 TQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAG 1139
+Q+++EDW+ + D+Y+S + +L +A E+ G WS D A+ +A E A + + + G
Sbjct: 1080 VRQMELEDWIEITGDDYISSLIADLNEQA-EQSEGGWSIDVAMGLAKETAAASAFIPSNG 1138
Query: 1140 EVFNFGDF 1147
FN+ ++
Sbjct: 1139 PTFNYEEW 1146
>gi|11095862|gb|AAG30069.1|AF282130_32 UL29 major DNA binding protein
[Meleagrid herpesvirus 1]
Length = 1190
Score = 1012 bits (2616), Expect = 0.0
Identities = 515/1148 (44%), Positives = 748/1148 (64%), Gaps = 18/1148 (1%)
Query: 10 TIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVV 69
++K+ GP+GYVY+ + + ++ L+ +A+ DS+ ++ PL+ GLTVES F NVA V
Sbjct: 7 SVKLVGGPIGYVYSMSKDAVPVDELSTFAAKCIDSEESILPLIAGLTVESEFVRNVAAVA 66
Query: 70 GSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYT 129
G++TTGL ++LKL P+HY +V+VF+GG + P ++APNLT+ CE AR FG+ Y+
Sbjct: 67 GTKTTGLVNGGITLKLVPTHYHPNVFVFYGGDCIKPCSKAPNLTKACEYARERFGYCPYS 126
Query: 130 PRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGA 189
PG + ET+G+ +CE+LGLD + +LYLVVTE FKEA+ + N+FL+ GGSD VTI A
Sbjct: 127 A-PGSV--ETSGKQICEQLGLDAQKTMLYLVVTELFKEAIYLCNSFLYYGGSDSVTINDA 183
Query: 190 EVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAA 249
EV RIP+YPL L +PDF+RV EPF+ R++G+ P FFN L RLL+ V+G A
Sbjct: 184 EVRRIPLYPLHLVLPDFNRVSNEPFSERPRALGDGAVMPEAFFNDALCRLLYGYVLGTDA 243
Query: 250 VALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQ---GK-TPRGGRDGGGKG 305
V LR RN+DAVAR AAHL FDENHEG LPAD TFTAF + GK P+ G+ G +
Sbjct: 244 VGLRVRNIDAVARGAAHLCFDENHEGILLPADTTFTAFTPTADTGGKGQPKAGKRDGAET 303
Query: 306 AAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANAVGAYL 365
GG+E+R AS+MA DA LA+E++++ +V++EP D+ WP+F R A+ AY+
Sbjct: 304 QGGGYERRTASLMASDATLAIENVIASSVYEEPIPDVKKWPIFCNPVGYTDRVEALSAYM 363
Query: 366 ARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHS--KPSFYRFFLVPGTHVAANPQVDR 423
R AGLVGAMVFS+NS +++TEV +A +D K+ PSFYRFF + H+AANP VDR
Sbjct: 364 GRVAGLVGAMVFSSNSVIYMTEVGEASSSDGKESGVPAPSFYRFFQIAAPHLAANPLVDR 423
Query: 424 EGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEM 483
+G + G AP + E++ ++L + CGF P LLA+ LFYLERCDG ++
Sbjct: 424 DGKPISGDALPKLAP--STSSEYSLDYLILACGFCPQLLARFLFYLERCDGGANACHHDL 481
Query: 484 DVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMY 543
D + V+ + D+PC LC +R C HTT+ RL R PKF RGA+G+FG M + Y
Sbjct: 482 DTVKLVSSAIDADMPCELCDKTSRVYCAHTTVKRLEYRLPKFGYQMRGAMGLFGAMTNNY 541
Query: 544 SDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRL 603
D + LG+YA FS LKR++G E +R++MQ+TYR ERVM LE + P M
Sbjct: 542 CDVNALGSYAQFSTLKRSEG-EASRSVMQDTYRLTVERVMKALEKEGLLACDDPMNMAPA 600
Query: 604 ETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYAC 663
+ I + + V+ +R +++ E QLMRNL E R R+GL +ANH +SLT++PY+
Sbjct: 601 DASIKDGASFIHAVSTMRNIIEGEASQLMRNLTEIRESNIREGLCDANHTLSLTIEPYSS 660
Query: 664 GPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFNNGF 723
G CP+L L RR+ +AV QD+ALSQC + GQ VE RNFR QFQ VLRRRV+++ N GF
Sbjct: 661 GFCPVLSFLARRTTIAVIQDMALSQCSMLMHGQQVEARNFRTQFQSVLRRRVLELQNAGF 720
Query: 724 LSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLF-AGA 782
+++K +T L E + P + Q P + EGD+ RVT+ +EL+VK+RV+F G
Sbjct: 721 ITSKDITATL-EDQHVAVPDPSRSQYDPTVINMEGDLTRVTIEIIRELKVKNRVIFGGGV 779
Query: 783 SANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQW 842
AS+AAK+R+A++ AYQ+P K +++L GPLGF +K++H+A+FPN K P PN W
Sbjct: 780 IGTASDAAKSRLANMIEAYQRPTKTMNVLNGPLGFAIKRYHSALFPNVKMPNGAVPNAHW 839
Query: 843 FWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQILR 902
FWT LQRNQLP +LS+ED E FIKKF+ Y +N+IN++P +LA +++AN IL+
Sbjct: 840 FWTLLQRNQLPDTMLSKEDQEKALFIKKFTNVYADMNYINISPTGFGDLAQFFLANTILK 899
Query: 903 YCDHSTYFINTLTAIIAGSRRPPSVQAAAAW---SAQGGAGLEAGARALMDAVDAHPGAW 959
YC H +FINT++A++A S++P W + G + A+ L+ + AW
Sbjct: 900 YCSHKHFFINTISALVAASKKPRDPAIVLPWIDKTITQGRDVSLAAQQLIGTIADRKDAW 959
Query: 960 TSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFD 1019
+ F++ NL+ VM+ +P++V+G+SISKY+GMAG+ +VFQ+GNW ++MGG+N C L+ FD
Sbjct: 960 CATFSATNLVGSVMSTKPLIVIGVSISKYHGMAGSTKVFQSGNWGNIMGGRNVCSLMSFD 1019
Query: 1020 RTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPR 1079
RT ++V+ACPR GFV + G E++L ++ R I+SE G A + V++ +K +G R
Sbjct: 1020 RTHRYVMACPRVGFVAEHTGFSSGLKEATLMDRARAILSEEGGAPHAEVYMLALKMVGER 1079
Query: 1080 TQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAG 1139
+Q+++EDW+ + D+Y+S + +L +A E+ G WS D A+ +A E A + + + G
Sbjct: 1080 VRQMELEDWIEITGDDYISSLIADLNEQA-EQSEGGWSIDVAMGLAKETAAASAFIPSNG 1138
Query: 1140 EVFNFGDF 1147
FN+ ++
Sbjct: 1139 PTFNYEEW 1146
>gi|5821284|dbj|BAA83753.1| homolog of HSV-1 glycoprotein [Gallid
herpesvirus 2]
Length = 1190
Score = 1005 bits (2598), Expect = 0.0
Identities = 512/1145 (44%), Positives = 739/1145 (63%), Gaps = 17/1145 (1%)
Query: 10 TIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVV 69
++K+ GP+GYVYA S E L++ +A+S D + A+ PLV GLTVE+ F NVA V
Sbjct: 6 SVKITGGPIGYVYAAPTSSMPAEDLSIFAAKSNDCEDAILPLVSGLTVEADFMWNVAAVA 65
Query: 70 GSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYT 129
G++TTGLG + +LKL P+HY V+VFHGG + P T+APNLT+ C+ AR FG+S Y+
Sbjct: 66 GTKTTGLGSGSTTLKLVPTHYHPCVFVFHGGECIKPCTKAPNLTKACDLARGRFGYSTYS 125
Query: 130 PRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGA 189
P P ETTGE +C+ LG++P +LYLVVTE FKEAV + N++LH GG+ V+I G
Sbjct: 126 P-PVATSFETTGEQICDNLGMNPQETMLYLVVTELFKEAVYLCNSYLHYGGTGVVSINGV 184
Query: 190 EVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAA 249
+V RIP+YPL L PDF+RV ++PF+ R++GE P F+N L RLL V+ AA
Sbjct: 185 DVRRIPLYPLHLVFPDFNRVASDPFSTKPRALGEGALMPKAFYNDSLCRLLHGYVLSTAA 244
Query: 250 VALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAF---EASQGKTPRGGRDGGGKGA 306
V LR RNVDA+AR AAHL+FDENHEG LPAD F AF E++ + G+ G + +
Sbjct: 245 VGLRVRNVDAIARCAAHLSFDENHEGTLLPADTAFNAFTPIESASKSQYKAGKKEGMELS 304
Query: 307 AGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANAVGAYLA 366
GG+E+R AS+MA DA L++E++++ +V++E D+ WPL+ R A+ AY+A
Sbjct: 305 GGGYERRTASLMASDATLSIENVIATSVYEESIPDVKKWPLYCSPIGYTDRVEALSAYMA 364
Query: 367 RAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHS--KPSFYRFFLVPGTHVAANPQVDRE 424
R AGLVGAMVFS+NS +++TEV +A AD KD S SFYRFF + H+A+NP +DR+
Sbjct: 365 RVAGLVGAMVFSSNSVIYMTEVGEASSADGKDTSTTAASFYRFFQIAAPHLASNPLIDRD 424
Query: 425 GHVVPGFE-GRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEM 483
G +PG + + T+ E++ ++L + CGF P LLA+ LFYLERCDG ++
Sbjct: 425 GKPIPGEDLSKATS---ASPSEYSLDYLILACGFCPQLLARFLFYLERCDGGSQACHHDL 481
Query: 484 DVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMY 543
D ++V+ + DVPC+LC +R C HTT+ RL R PKF RGA+G+FG+M + Y
Sbjct: 482 DTVKFVSSAMDADVPCDLCDKASRIYCAHTTIKRLEYRLPKFGYQMRGAMGLFGSMTNNY 541
Query: 544 SDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRL 603
D + LG+YA FS LKR++G ET+R++MQ+TY+ ERVM LE + P M
Sbjct: 542 CDVNALGSYAPFSTLKRSEG-ETSRSVMQDTYKLTVERVMKALEKEGLLTCEDPADMTPA 600
Query: 604 ETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYAC 663
+ II + ++ ++ + +++ E QLMRNL E R + R+GLG+A H +SL ++PY+
Sbjct: 601 DAIIRDGKSFMRALSTMANIIESEAGQLMRNLTEIREYNIREGLGDATHTLSLAIEPYSS 660
Query: 664 GPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFNNGF 723
G CP+L L RR+ +AV QD+ALSQC + GQ VE RNFR QFQ VLRRRV+D+ N GF
Sbjct: 661 GICPVLSFLSRRTIIAVVQDMALSQCSMIMHGQQVEARNFRTQFQAVLRRRVLDLQNAGF 720
Query: 724 LSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLF-AGA 782
+++K +TV L E I P + Q P EGD+ +VT +E +VK++V+F G
Sbjct: 721 ITSKNITVTL-EDQQISVPDPSKSQHDPLAVHMEGDLVKVTFEIFREFKVKNKVMFVGGV 779
Query: 783 SANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQW 842
S+ S+A K+R+A + AYQ+P K + +L GPLGF LK++H +FPN K P PN W
Sbjct: 780 SSTVSDATKSRLAGMIEAYQRPAKAMHVLNGPLGFALKRYHTQLFPNVKMPNGTTPNALW 839
Query: 843 FWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQILR 902
FW LQRNQLPA +LS++ E +FIK+F+ Y +N+IN++P ELA +Y+AN ILR
Sbjct: 840 FWILLQRNQLPAGILSKDAEENTSFIKRFTNSYADMNYINISPTCFGELAQFYLANTILR 899
Query: 903 YCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQ---GGAGLEAGARALMDAVDAHPGAW 959
YC H +FINT++A++A S+RP W G+ + A+ L+ + H AW
Sbjct: 900 YCSHKHFFINTISALVATSKRPRDPAMVLPWIEHILTQGSDVAPAAQQLLKNICDHKEAW 959
Query: 960 TSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFD 1019
+ F+S NL+ P+MA++P VV+ +SISKY+GMAG+ +VFQ+GNW ++MGG+N C ++ F+
Sbjct: 960 CAAFSSTNLVGPIMASKPFVVIAVSISKYHGMAGSTKVFQSGNWGNIMGGRNVCSIMSFN 1019
Query: 1020 RTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPR 1079
RT +FV+ACPR GFV + G E++L ++ R ++SE A ++V++ +K +G R
Sbjct: 1020 RTHRFVMACPRVGFVSEQTGFSSGLKETTLVDRARAVLSEECGAPHAAVYMIALKMVGDR 1079
Query: 1080 TQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAG 1139
+Q++++DW+ + D Y+S + EL + +E G WS DAA +A E + L G
Sbjct: 1080 VRQMELDDWMEITNDAYISSLIDELN-KQVEGCEGGWSVDAAAILAKEMVDMSKALPLDG 1138
Query: 1140 EVFNF 1144
FN+
Sbjct: 1139 PTFNY 1143
>gi|10834900|ref|NP_066861.1| UL29 protein [Gallid herpesvirus 3]
gi|5689301|dbj|BAA82925.1| UL29 product homolog [Marek's disease
virus serotype 2 MDV2]
gi|10799994|dbj|BAB16539.1| UL29 protein [Gallid herpesvirus 3]
Length = 1190
Score = 1004 bits (2595), Expect = 0.0
Identities = 511/1145 (44%), Positives = 739/1145 (63%), Gaps = 17/1145 (1%)
Query: 10 TIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVV 69
++K+ GP+GYVYA S E L++ +A+S D + A+ PLV GLTVE+ F NVA V
Sbjct: 6 SVKITGGPIGYVYAAPTSSMPAEDLSIFAAKSNDCEDAILPLVSGLTVEADFMWNVAAVA 65
Query: 70 GSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYT 129
G++TTGLG + +LKL P+HY V+VFHGG + P T+APNLT+ C+ AR FG+S Y+
Sbjct: 66 GTKTTGLGSGSTTLKLVPTHYHPCVFVFHGGECIKPCTKAPNLTKACDLARGRFGYSTYS 125
Query: 130 PRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGA 189
P P ETTGE +C+ LG++P +LYLVVTE FKEAV + N++LH GG+ V+I G
Sbjct: 126 P-PVATSFETTGEQICDNLGMNPQETMLYLVVTELFKEAVYLCNSYLHYGGTGVVSINGV 184
Query: 190 EVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAA 249
+V R+P+YPL L PDF+RV ++PF+ R++GE P F+N L RLL V+ AA
Sbjct: 185 DVRRMPLYPLHLVFPDFNRVASDPFSTKPRALGEGALMPKAFYNDSLCRLLHGYVLSTAA 244
Query: 250 VALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAF---EASQGKTPRGGRDGGGKGA 306
V LR RNVDA+AR AAHL+FDENHEG LPAD F AF E++ + G+ G + +
Sbjct: 245 VGLRVRNVDAIARCAAHLSFDENHEGTLLPADTAFNAFTPIESASKSQYKAGKKEGMELS 304
Query: 307 AGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANAVGAYLA 366
GG+E+R AS+MA DA L++E++++ +V++E D+ WPL+ R A+ AY+A
Sbjct: 305 GGGYERRTASLMASDATLSIENVIATSVYEESIPDVKKWPLYCSPIGYTDRVEALSAYMA 364
Query: 367 RAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHS--KPSFYRFFLVPGTHVAANPQVDRE 424
R AGLVGAMVFS+NS +++TEV +A AD KD S SFYRFF + H+A+NP +DR+
Sbjct: 365 RVAGLVGAMVFSSNSVIYMTEVGEASSADGKDTSTTAASFYRFFQIAAPHLASNPLIDRD 424
Query: 425 GHVVPGFE-GRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEM 483
G +PG + + T+ E++ ++L + CGF P LLA+ LFYLERCDG ++
Sbjct: 425 GKPIPGEDLSKATS---ASPSEYSLDYLILACGFCPQLLARFLFYLERCDGGSQACHHDL 481
Query: 484 DVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMY 543
D ++V+ + DVPC+LC +R C HTT+ RL R PKF RGA+G+FG+M + Y
Sbjct: 482 DTVKFVSSAMDADVPCDLCDKASRIYCAHTTIKRLEYRLPKFGYQMRGAMGLFGSMTNNY 541
Query: 544 SDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRL 603
D + LG+YA FS LKR++G ET+R++MQ+TY+ ERVM LE + P M
Sbjct: 542 CDVNALGSYAPFSTLKRSEG-ETSRSVMQDTYKLTVERVMKALEKEGLLTCEDPADMTPA 600
Query: 604 ETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYAC 663
+ II + ++ ++ + +++ E QLMRNL E R + R+GLG+A H +SL ++PY+
Sbjct: 601 DAIIRDGKSFMRALSTMANIIESEAGQLMRNLTEIREYNIREGLGDATHTLSLAIEPYSS 660
Query: 664 GPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFNNGF 723
G CP+L L RR+ +AV QD+ALSQC + GQ VE RNFR QFQ VLRRRV+D+ N GF
Sbjct: 661 GICPVLSFLSRRTIIAVVQDMALSQCSMIMHGQQVEARNFRTQFQAVLRRRVLDLQNAGF 720
Query: 724 LSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLF-AGA 782
+++K +TV L E I P + Q P EGD+ +VT +E +VK++V+F G
Sbjct: 721 ITSKNITVTL-EDQQISVPDPSKSQHDPLAVHMEGDLVKVTFEIFREFKVKNKVMFVGGV 779
Query: 783 SANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQW 842
S+ S+A K+R+A + AYQ+P K + +L GPLGF LK++H +FPN K P PN W
Sbjct: 780 SSTVSDATKSRLAGMIEAYQRPAKAMHVLNGPLGFALKRYHTQLFPNVKMPNGTTPNALW 839
Query: 843 FWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQILR 902
FW LQRNQLPA +LS++ E +FIK+F+ Y +N+IN++P ELA +Y+AN ILR
Sbjct: 840 FWILLQRNQLPAGILSKDAEENTSFIKRFTNSYADMNYINISPTCFGELAQFYLANTILR 899
Query: 903 YCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQ---GGAGLEAGARALMDAVDAHPGAW 959
YC H +FINT++A++A S+RP W G+ + A+ L+ + H AW
Sbjct: 900 YCSHKHFFINTISALVATSKRPRDPAMVLPWIEHILTQGSDVAPAAQQLLKNICDHKEAW 959
Query: 960 TSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFD 1019
+ F+S NL+ P+MA++P VV+ +SISKY+GMAG+ +VFQ+GNW ++MGG+N C ++ F+
Sbjct: 960 CAAFSSTNLVGPIMASKPFVVIAVSISKYHGMAGSTKVFQSGNWGNIMGGRNVCSIMSFN 1019
Query: 1020 RTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPR 1079
RT +FV+ACPR GFV + G E++L ++ R ++SE A ++V++ +K +G R
Sbjct: 1020 RTHRFVMACPRVGFVSEQTGFSSGLKETTLVDRARAVLSEECGAPHAAVYMIALKMVGDR 1079
Query: 1080 TQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAG 1139
+Q++++DW+ + D Y+S + EL + +E G WS DAA +A E + L G
Sbjct: 1080 VRQMELDDWMEITNDAYISSLIDELN-KQVEGCEGGWSVDAAAILAKEMVDMSKALPLDG 1138
Query: 1140 EVFNF 1144
FN+
Sbjct: 1139 PTFNY 1143
>gi|9635063|ref|NP_057788.1| UL29 [Gallid herpesvirus 2]
gi|7673140|gb|AAF66764.1|AF147806_28 UL29 [Gallid herpesvirus 2]
Length = 1191
Score = 984 bits (2544), Expect = 0.0
Identities = 504/1119 (45%), Positives = 719/1119 (64%), Gaps = 18/1119 (1%)
Query: 37 LSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYV 96
L+A+S D D AV PLV GLTVES F NVA V G++TTGLG +LKL P+HY V+V
Sbjct: 33 LAAKSNDCDDAVLPLVAGLTVESDFVWNVAAVAGTKTTGLGSGGTTLKLVPTHYHPCVFV 92
Query: 97 FHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRAL 156
F+GG + P T+APNLT+ C+ AR FG+S Y+ P ETTG+ +CE L +D +
Sbjct: 93 FYGGDCIKPCTKAPNLTKACDLARERFGYSAYSS-PAPTAFETTGQQICEALEMDAQNVM 151
Query: 157 LYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNA 216
LYLVVTE FKE + + N+FLH GGSD VTI A+V RIP+YPL L +PDF+R+ EPF+
Sbjct: 152 LYLVVTELFKEVIYLCNSFLHFGGSDVVTINNADVRRIPIYPLHLVLPDFNRITNEPFSE 211
Query: 217 NHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGA 276
R++GE P F+N L RLL V+ AV LR RN+DA+AR AAHL FDENHEG
Sbjct: 212 KPRALGEGAIMPKAFYNDSLCRLLHGYVLSTTAVGLRVRNIDAIARGAAHLCFDENHEGT 271
Query: 277 ALPADITFTAF----EASQGKTPRGGRDGGGKGAAGGFEQRLASVMAGDAALALESIVSM 332
LPAD TFTAF E ++G++ G R+G + GG+E+R AS+MA DA LA+E+++S
Sbjct: 272 LLPADTTFTAFTPAAETTKGQSKMGKREGSDV-SGGGYERRTASLMASDATLAIENVISA 330
Query: 333 AVFDEPPTDISAWPLFEGQDTAAARANAVGAYLARAAGLVGAMVFSTNSALHLTEVDDAG 392
+V+++P D++ WP++ A R A+ AY+AR AGLVGAMVFS+NS +++TEV +AG
Sbjct: 331 SVYEDPIPDVNKWPIYCNPVGYADRIEALSAYMARVAGLVGAMVFSSNSVIYMTEVGEAG 390
Query: 393 PADPKDHS--KPSFYRFFLVPGTHVAANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEH 450
+ + S PSFYRFF + H++ANP VDR+G V G + E++ ++
Sbjct: 391 STEGTETSTTAPSFYRFFQIAAPHLSANPLVDRDGKPVSG--ENLSKSTSASQSEYSLDY 448
Query: 451 LAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHAC 510
L + CGF P LLA+ LFYLERCDG ++D ++V+ + D+PC LC +R C
Sbjct: 449 LILACGFCPQLLARFLFYLERCDGGAKASHHDLDTVKFVSSAIDADMPCELCDKTSRIYC 508
Query: 511 VHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSDCDVLGNYAAFSALKRADGSETARTI 570
HTT+ RL R PKF RGA+G+FG M + Y D + L +YA FS LKR++G E +R++
Sbjct: 509 AHTTIKRLVYRLPKFGYQMRGAMGLFGAMTNNYCDVNALVSYAQFSTLKRSEG-EASRSV 567
Query: 571 MQETYRAATERVMAELETLQYVDQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQ 630
MQ+TYR ER+M LE + PT M + I + + ++ ++ +++ E Q
Sbjct: 568 MQDTYRLTVERMMKALEKEGLLTCDDPTNMASADANIRDGNSFIRAISTMKNIIESEASQ 627
Query: 631 LMRNLVEGRNFKFRDGL-GEANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQC 689
LMRNL E R + G+ G+ANH +SL ++PYA G CP+L L RR+ +AV QD+ALSQC
Sbjct: 628 LMRNLTEIREYNITRGVWGDANHTLSLAVEPYASGICPVLAFLSRRTIIAVVQDMALSQC 687
Query: 690 HGVFAGQSVEGRNFRNQFQPVLRRRVMDMFNNGFLSAKTLTVALSEGAAICAPSLTAGQT 749
V GQ VE RNFR QFQ VL+RRV+++ N GF+++KT+TV L E IC P + Q
Sbjct: 688 SIVMQGQQVEARNFRTQFQAVLKRRVLELQNAGFITSKTITVTL-EDQQICVPDPSKSQY 746
Query: 750 APAESSFEGDVARVTLGFPKELRVKSRVLFAGASAN-ASEAAKARVASLQSAYQKPDKRV 808
S+ EGD+ +VT+ +EL+VK++VLF G A ASEA K+R+A + AYQ+P K +
Sbjct: 747 DSVISNMEGDLVKVTVEIFRELKVKNKVLFGGGIAGAASEATKSRLAGMVEAYQRPTKTM 806
Query: 809 DILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFI 868
+L GPLGF +K++H +FP+ K P PN WFW L RNQLPA +LS+E+ + FI
Sbjct: 807 HVLNGPLGFAVKRYHTLLFPDVKMPNGATPNALWFWILLLRNQLPAGILSKEEEDKSLFI 866
Query: 869 KKFSLDYGAINFINLAPNNVSELAMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQ 928
KKF+ Y +N+IN++P +LA +Y+AN IL+YC H +FINT++A++A SRRP
Sbjct: 867 KKFTKSYADMNYINISPTCFGDLAQFYLANTILKYCSHKHFFINTISALVAASRRPRDPA 926
Query: 929 AAAAWSAQ---GGAGLEAGARALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSI 985
W + G + A+ L+ ++ H W + F+S NL+ +M +P VV+G+SI
Sbjct: 927 IVLPWIERPITKGQDVAPAAQQLIASMSDHKDIWCATFSSTNLVGSIMTTKPFVVIGISI 986
Query: 986 SKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDRTRKFVLACPRAGFVCAASSLGGGAH 1045
SKY+GMAG+ +VFQ+GNW ++MGG+N C L+ FDRT ++V+ CPR GFV G
Sbjct: 987 SKYHGMAGSTKVFQSGNWGNIMGGRNVCSLMSFDRTHRYVMTCPRVGFVAEQPIFSSGIK 1046
Query: 1046 ESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELT 1105
E++L +++R ++SE AA ++V++ +K +G R +Q+++EDW+ + DEY+S + EL
Sbjct: 1047 ETTLIDRVRMVLSEESAAPHAAVYMLALKMVGDRVRQMELEDWMEITNDEYISSLIDELN 1106
Query: 1106 ARALERGNGEWSTDAALEVAHEAEALVSQLGNAGEVFNF 1144
+ +E G W+ DAA+ +A E + + G F+F
Sbjct: 1107 -KQVEEAEGGWNADAAMTLAKEMVNMAMSIPTDGPTFDF 1144
>gi|5918970|gb|AAD56201.1|AF168792_2 DNA binding protein [Gallid
herpesvirus 1]
Length = 999
Score = 477 bits (1227), Expect = e-133
Identities = 299/791 (37%), Positives = 435/791 (54%), Gaps = 43/791 (5%)
Query: 16 GPLGYVYARACPSEGIE--LLALLSARSGDS-DVAVAPLVVGLTVESGFEANVAVVVGSR 72
GP+GYVYAR P E I+ +L A+S D A+APL+ GLTVES F+ NVA V+G++
Sbjct: 22 GPIGYVYAR--PREEIDGKEWKILCAKSQDQPSCAIAPLIRGLTVESDFKPNVAAVIGTK 79
Query: 73 TTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPR- 131
++G+ G + L+P H+S++VY+FHGG + P++ PNLT++CE AR FGFS P
Sbjct: 80 SSGVVGGNCTAILSPCHFSTTVYIFHGGECIPPTSFTPNLTKICEDARERFGFSSLPPNG 139
Query: 132 PGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEV 191
P ETTGE +C+ L +DPD+ +LYLVV E F EAV + NT++H G + + I V
Sbjct: 140 PVPNAIETTGEEICKSLNMDPDKTMLYLVVAEPFCEAVYVCNTYIHYGSVETLYINSKHV 199
Query: 192 HRIPVYPLQLFMPDFS-RVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAV 250
RIP+YP+Q++MPD + R+ PF++N R+IGE YP P FN+ LNRL+ A +G
Sbjct: 200 TRIPIYPVQMYMPDIALRICRNPFDSNSRNIGEGCIYPTPLFNKALNRLIHGATLGTQGQ 259
Query: 251 ALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGF 310
+LR R+++AVAR AA LAFD + EG L +D TFT + +T G
Sbjct: 260 SLRTRDLEAVARGAAMLAFDGSFEGCVLTSDKTFTELAQNIQQT-------GPPKQNVEV 312
Query: 311 EQRLASVMAGDAALALESIVSMAVFDEPPTD------ISAWPLFEGQDTAAARANAVGAY 364
E+R A +A + ALA VS A + P D WPLF T R A+ +
Sbjct: 313 ERRAACSLAAELALATRLSVSCAPY---PFDNGCGLPYEEWPLFCDCKTQMERVQALDRF 369
Query: 365 LARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDRE 424
A AG+VGA +FS NS L+ +EV D G +P + + RF+L G H+ PQVD
Sbjct: 370 SAELAGIVGAAIFSNNSPLYASEVVDGGAPEPGERASSGLTRFYLTCGLHLLGCPQVDYS 429
Query: 425 GHVVPGFEGRPTAPLV-GGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEM 483
G V +EG +PL T E+ EHLA CGFSP LL++++FYLE+C + R M
Sbjct: 430 GKRV--WEGTCPSPLTPQNTFEYDPEHLAYACGFSPELLSRIIFYLEKCSKQLST-RPNM 486
Query: 484 DVFRYVADSNQTDVP-------CNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVF 536
++ ++ SN P C C ++R+ C+ T+ RLR R P + R I V
Sbjct: 487 NL---ISISNSGKAPCTGAVPECRWCNDESRNHCIRYTMQRLRTRFPIPRTMRRSPIAVI 543
Query: 537 GTMNSMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAV 596
G ++ Y+DCD+LGN+A +S LKRA E A+ +M +TYR RV L + +++
Sbjct: 544 GAVDGDYTDCDILGNFAPYSQLKRAGDGEPAKAVMNDTYRGIGWRVFQYLVSEGLINKDT 603
Query: 597 PTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSL 656
G I++ L TV ++ V E + + L R + +++ L H
Sbjct: 604 ----GEDTHNISSLAELKTVFEKIQNFVGSECSKFISALSGVRAYHYKEHLSSIVHTFG- 658
Query: 657 TLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVM 716
+ +PY+ CP+L LL ++ ++QDL LSQ HG F + E + FR+ P LR
Sbjct: 659 SPEPYSSAYCPVLSLLCAQTRSILFQDLILSQIHGTFDTRQPESKMFRSSAMPALRSAFN 718
Query: 717 DMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSR 776
M + GFLS K ++S + AP T A + +E ++R + KE +VK+R
Sbjct: 719 GMLDKGFLSGKYEPFSISV-PCVNAPDTMRPNTEQAIAQYEYSLSRGQVLKLKEFKVKNR 777
Query: 777 VLFAGASANAS 787
V+F G+S + S
Sbjct: 778 VVFNGSSTSNS 788
Score = 111 bits (277), Expect = 9e-23
Identities = 62/186 (33%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
Query: 964 ASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPL---LIFDR 1020
++ N R V++++P+V+LG+ ISKY G + VFQ+GNW SL+G + + L D
Sbjct: 784 STSNSCRVVLSSKPIVMLGIMISKYVGQQNSTTVFQSGNWGSLIGNSGSQSVNSALTNDP 843
Query: 1021 TRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRT 1080
RKF LAC R G + ++ + G E+++ Q+R +I GG+ +S++ A ++ LG
Sbjct: 844 VRKFALACKRVGTILSSGQVASGFQENTIASQVRSLIDAGGS--PTSIYTAVLRVLGEGM 901
Query: 1081 QQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGE 1140
+ + E W+A+ +D+YL ++EL NG WS A + E E + NAGE
Sbjct: 902 KDITAETWMAITDDKYLVNILVELREDISGSQNG-WSVATAQSMLSELEGKDTCPENAGE 960
Query: 1141 VFNFGD 1146
+ + D
Sbjct: 961 MLVWAD 966
>gi|461947|sp|Q03444|DNBI_HSVE1 Major DNA-binding protein
gi|93130|pir||JQ0846 DNA-binding protein - equine herpesvirus 1
(fragment)
gi|221826|dbj|BAA03033.1| DNA binding protein [Equine herpesvirus 1]
Length = 375
Score = 385 bits (988), Expect = e-105
Identities = 199/377 (52%), Positives = 252/377 (66%), Gaps = 13/377 (3%)
Query: 830 GKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVS 889
G PPG + PNPQWFWT LQRNQ+PARLLS+EDIETI IK+FS +Y AINFINL PNN+
Sbjct: 2 GHPPGIDTPNPQWFWTLLQRNQMPARLLSKEDIETITAIKRFSDEYSAINFINLTPNNIG 61
Query: 890 ELAMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAW---SAQGGAGLEAGAR 946
ELA +Y AN +L+YCDHS YFIN LTAI+ GSRRP A AW + G A +E A+
Sbjct: 62 ELAQFYFANLVLKYCDHSQYFINGLTAIVVGSRRPRDPAAVLAWIDRTINGAADVEPAAQ 121
Query: 947 ALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASL 1006
++ + ++P AWT F S N++R VM RPMVV+GLSISKY G AGN+RVFQAGNW L
Sbjct: 122 EVLQRLGSNPAAWTGTFTSTNMVRYVMDQRPMVVIGLSISKYNGSAGNNRVFQAGNWNGL 181
Query: 1007 MGGKNACPLLIFDRTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVAS 1066
GGKN CPL+ FDRTR+FVLACPR GF C A G G E++L EQ+RGI+SEGG V +
Sbjct: 182 NGGKNVCPLMAFDRTRRFVLACPRVGFTCEAGGFGTGVRENTLSEQVRGIVSEGGPMVQT 241
Query: 1067 SVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAH 1126
+VF A + +LG RTQ L ++DW+ L++DE+L+ + L A +++ GEWS +AA E+
Sbjct: 242 AVFAAVLHALGARTQHLAVDDWIGLVDDEFLAASLDALNATVVDQ-FGEWSVEAAQELVK 300
Query: 1127 --EAEALVSQLGNAGEVFNFGDFGCEDD----NATPFGGPGAPGPAFAGRKRAFHGDDPF 1180
EA+ + F+FG C D + + F G A A AG+KR+ D F
Sbjct: 301 NMEAQTTAGAVAAGEGAFDFG--ACVGDTPQQSTSAFNGGLAMAAAPAGQKRSLPDDILF 358
Query: 1181 GEG-PPDKKGDLTLDML 1196
G PP+KK LT DML
Sbjct: 359 DMGAPPEKKSGLTFDML 375
>gi|330107|gb|AAA45787.1| DNA-binding protein
Length = 135
Score = 277 bits (708), Expect = 1e-72
Identities = 135/135 (100%), Positives = 135/135 (100%)
Query: 1062 AAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAA 1121
AAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAA
Sbjct: 1 AAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAA 60
Query: 1122 LEVAHEAEALVSQLGNAGEVFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFG 1181
LEVAHEAEALVSQLGNAGEVFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFG
Sbjct: 61 LEVAHEAEALVSQLGNAGEVFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFG 120
Query: 1182 EGPPDKKGDLTLDML 1196
EGPPDKKGDLTLDML
Sbjct: 121 EGPPDKKGDLTLDML 135
>gi|24943092|ref|NP_733854.1| ORF2 [Callitrichine herpesvirus 3]
gi|13676643|gb|AAK38209.1|AF319782_3 ORF2 [callitrichine herpesvirus
3]
Length = 1127
Score = 264 bits (674), Expect = 9e-69
Identities = 295/1191 (24%), Positives = 466/1191 (38%), Gaps = 126/1191 (10%)
Query: 16 GPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGSRTTG 75
GP GY+Y I +LL PL+ GLTVE+GF NV +
Sbjct: 18 GPCGYLYFYPLDGFPIREASLLGTGYHGHKALTLPLLCGLTVENGFSFNVKALHRRPDPN 77
Query: 76 LGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPRPGDL 135
G L + + YVFH + P P L LC+ R +G+ Y+P P D
Sbjct: 78 TG------LLRATCFHRDAYVFHNATAIPPVFSGPGLELLCDETREVYGYDAYSP-PVDA 130
Query: 136 KHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEVHRIP 195
+ E L DP + +VTE FKE + N + L +V+IGG IP
Sbjct: 131 RETKVEEYFPSEL--DPSAYVGAAIVTEAFKERLYSGNLVVILSLKREVSIGGYASICIP 188
Query: 196 VYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVALRCR 255
+Y ++F ++ FFN+ L++ ++E + A +LR R
Sbjct: 189 LYDREVFPGGVAKSAV-------------------FFNKALSKCMYETLYTGLAQSLRLR 229
Query: 256 NVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFEQRLA 315
VD A + H+ +P F A+ P A
Sbjct: 230 RVDEFISAMERQSL---HDQIKVPKVAHLKEFNAATLSHPESS----------------A 270
Query: 316 SVMAGDAALALESIVSMAVFD---EPPTDI--SAWPLFEGQDTAAARANAVGAYLARAAG 370
++ A+ L + A+ D EPPT I AWP+FEG + AR A+ + A A
Sbjct: 271 VMIVDTASCELATSYGPAMIDAVQEPPTGIRYDAWPVFEGCENEDARLKALHGFNALLAP 330
Query: 371 LVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDREGHVVPG 430
A +FSTNS L+++ V + + ++ FF+ G D+ V
Sbjct: 331 HAAAQIFSTNSVLYVSGVSKSTQGGRDN----TYNSFFITHGLGSLQEGTWDQNRQPVFS 386
Query: 431 FEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDVFRYVA 490
P G ++ EHL FSP LLA+ +YL+ C G Q ++ YVA
Sbjct: 387 GWAGPDVTGSSGPGNYSVEHLVFAASFSPNLLARYAYYLQFCQGQKSSLNQSHEIGSYVA 446
Query: 491 DSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSDCDVLG 550
+ + V C+LC T C++T RLR R P S R V + Y++ D LG
Sbjct: 447 GAATSSV-CSLCEGSTPAVCLNTLFFRLRDRFPPVTSTHRRDPYVITGASGAYNETDFLG 505
Query: 551 NYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLETIITNR 610
N+ F + R D + + TY + ++ L L G E
Sbjct: 506 NFLNF--VDRDDDGQRVEDEPRYTYWQLNQNLIERLSRLGIDGD------GNCERDPKTA 557
Query: 611 EALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGPCPLLQ 670
++ +V Q VD EV Q M ++ + N ++D + H + + +PYA PC +
Sbjct: 558 RDFMKLLKDVDQAVDAEVVQFMGSMAKN-NVGYKDLIKSCYHILQYSCNPYAQAPCTVFL 616
Query: 671 LLGRRSNLAVYQDLALSQC-----HGVFAGQSVEGRNFRNQFQPVLRRRVMDMFNNGFLS 725
L RS + QD+AL C GQS + + +Q + + G L+
Sbjct: 617 QLFYRSMFTILQDIALPICMCYENDNPGLGQSAQ-EWLKGHYQTLCTNFRSLAVDKGTLT 675
Query: 726 AKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFAGASAN 785
AK + V E + A A + +++V + PK +++K+R++F G ++
Sbjct: 676 AKEVKVVHPEPTSDVADLDAAIKGRVMVQRLTVRMSKVLMLCPKNIKIKNRIVFTGENS- 734
Query: 786 ASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQWF 843
LQ+ + K D I+ GP LL +H +FP K + +
Sbjct: 735 ----------LLQNNFIKSTAHRDNYIINGPYIKLLNNYHKVLFPETKL------SCLYL 778
Query: 844 WTALQRNQ---LPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQI 900
W R + +P + E + F+ S + N I++ P ++ A M N I
Sbjct: 779 WHNFARKRTLPIPPGGDNAEYSDLALFVDSGSRAHEQANVIDIVPGDLITYAKQRMNNSI 838
Query: 901 LRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVD--AHPGA 958
L+ C + +FI+ L A++ P +Q A G + + D ++ A
Sbjct: 839 LKACGQTQFFISLLHALV------PKIQTVPARDYPHVLGGDVKLTSSEDYTRQISNMTA 892
Query: 959 WTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMG---GKNACP- 1014
T + ++ V ARP++ L L+++KY G+ GN ++FQAGN MG +N P
Sbjct: 893 KTFVCTVTDVFSEVSRARPIITLPLTVNKYTGVNGNSQIFQAGNLGYFMGRGVDRNLLPG 952
Query: 1015 --------LLIFDRTRKFVLACPRAGFVCAASSLGGGAHE-SSLCEQLRGIISEGGAA-V 1064
+ +KFV A P G + E + L IIS+
Sbjct: 953 QSLGLKKQMGGVSMRKKFVFATPTLGLTSKRRPQMSVSFEIEKIRSTLEAIISQKQEEDS 1012
Query: 1065 ASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEV 1124
V V+ LG L + D LL + + + L EW+T+ A +
Sbjct: 1013 VVDVVCKLVECLGEACASLTLADAEYLLGRYSILASCVLESLEKLAAAGVEWNTEVARDF 1072
Query: 1125 AHEAEALVSQLGNAGEVFNFGDFGCEDDNATPFGGP---GAPGPAFAGRKR 1172
++L S+ AGE F E+ P G G+ G + RKR
Sbjct: 1073 ---LDSLASEHLAAGETF----ISIEEPVLIPASGGLSIGSHGTSTVRRKR 1116
>gi|9625660|ref|NP_039911.1| major ssDNA binding protein [Human
herpesvirus 4]
gi|118744|sp|P03227|DNBI_EBV Major DNA-binding protein
gi|74047|pir||QQBE47 DNA-binding protein - human herpesvirus 4
(strain B95-8)
gi|1334916|emb|CAA24808.1| BALF2 early reading frame, homologous to
RF 29 VZV and major DNA binding protein HSV. 3.9kb early
RNA [Human herpesvirus 4]
gi|23893663|emb|CAD53467.1| major DNA-binding protein [Human
herpesvirus 4]
Length = 1128
Score = 248 bits (634), Expect = 4e-64
Identities = 283/1145 (24%), Positives = 453/1145 (38%), Gaps = 132/1145 (11%)
Query: 15 PGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGSRTT 74
PGP GY+Y + + +A L PL+ G+TVE GF NV +
Sbjct: 17 PGPCGYIYFYPLATYPLREVATLGTGYAGHRCLTVPLLCGITVEPGFSINVKALHRRPDP 76
Query: 75 GLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPRPGD 134
G L + Y +YVFH + P + P L LC R FG+ Y+ P +
Sbjct: 77 NCG------LLRATSYHRDIYVFHNAHMVPPIFEGPGLEALCGETREVFGYDAYSALPRE 130
Query: 135 LKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEVHRI 194
G+ E GLDP L + +TE FKE + N +V +G + R+
Sbjct: 131 --SSKPGDFFPE--GLDPSAYLGAVAITEAFKERLYSGNLVAIPSLKQEVAVGQSASVRV 186
Query: 195 PVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVALRC 254
P+Y ++F ++ F+N L+R + EA+ A ALR
Sbjct: 187 PLYDKEVFPEGVPQL-------------------RQFYNSDLSRCMHEALYTGLAQALRV 227
Query: 255 RNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFEQRL 314
R V + + + + A + F AS P G
Sbjct: 228 RRVGKLVELLEKQSLQDQAKVAKVAP---LKEFPASTISHPDSG---------------- 268
Query: 315 ASVMAGDAALALESIVSMAVFD---EPPTDIS--AWPLFEGQDTAAARANAVGAYLARAA 369
A ++ AA L + A+ + E P ++ +WPLF + AR A+ Y A A
Sbjct: 269 ALMIVDSAACELAVSYAPAMLEASHETPASLNYDSWPLFADCEGPEARVAALHRYNASLA 328
Query: 370 GLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYR-FFLVPGTHVAANPQVDREGHVV 428
V +F+TNS L+++ G + K S + F++ G D
Sbjct: 329 PHVSTQIFATNSVLYVS-----GVSKSTGQGKESLFNSFYMTHGLGTLQEGTWDPCRRPC 383
Query: 429 PGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDVFRY 488
G P G +A EHL FSP LLA+ +YL+ C G + Y
Sbjct: 384 FSGWGGPDVTGTNGPGNYAVEHLVYAASFSPNLLARYAYYLQFCQGQKSSLTPVPETGSY 443
Query: 489 VADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSDCDV 548
VA + + + C+LC C++T RLR R P S R V + Y++ D
Sbjct: 444 VAGAAASPM-CSLCEGRAPAVCLNTLFFRLRDRFPPVMSTQRRDPYVISGASGSYNETDF 502
Query: 549 LGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLETIIT 608
LGN+ F + + D + + TY + ++ L L A G+LE
Sbjct: 503 LGNFLNF--IDKEDDGQRPDDEPRYTYWQLNQNLLERLSRLGI------DAEGKLEKEPH 554
Query: 609 NREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGPCPL 668
+ +V VD EV Q M ++ + N ++D + H M + +P+A CP+
Sbjct: 555 GPRDFVKMFKDVDAAVDAEVVQFMNSMAKN-NITYKDLVKSCYHVMQYSCNPFAQPACPI 613
Query: 669 LQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRN----FRNQFQPVLRRRVMDMFNNGFL 724
L RS L + QD++L C G++ + +Q + + G L
Sbjct: 614 FTQLFYRSLLTILQDISLPICMCYENDNPGLGQSPPEWLKGHYQTLCTNFRSLAIDKGVL 673
Query: 725 SAKTLTVALSEGAAIC-APSLTA-------GQTAPAESSFEGDVARVTLGFPKELRVKSR 776
+AK V G C P L A G+ P S +V + P+ +++K+R
Sbjct: 674 TAKEAKVV--HGEPTCDLPDLDAALQGRVYGRRLPVRMS------KVLMLCPRNIKIKNR 725
Query: 777 VLFAGASANASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLKQFHAAIFPNGKPPG 834
V+F G +A +LQ+++ K R + I+ GP L +H +FP+ K
Sbjct: 726 VVFTGENA-----------ALQNSFIKSTTRRENYIINGPYMKFLNTYHKTLFPDTKL-- 772
Query: 835 SNQPNPQWFWTALQRNQ---LPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSEL 891
+ + W R + +P+ + E + F+ S + N I++ P N+
Sbjct: 773 ----SSLYLWHNFSRRRSVPVPSGASAEEYSDLALFVDGGSRAHEESNVIDVVPGNLVTY 828
Query: 892 AMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDA 951
A + N IL+ C + ++I+ + ++ R SV A G +E+ A A +A
Sbjct: 829 AKQRLNNAILKACGQTQFYISLIQGLVP---RTQSVPARDYPHVLGTRAVESAA-AYAEA 884
Query: 952 VDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKN 1011
+ A T + A+ + L V ARP+V L ++I+KY G+ GN+++FQAGN MG
Sbjct: 885 TSSLT-ATTVVCAATDCLSQVCKARPVVTLPVTINKYTGVNGNNQIFQAGNLGYFMGRGV 943
Query: 1012 ACPLLI------------FDRTRKFVLACPRAGFVCAASSLGGGAHE-SSLCEQLRGIIS 1058
LL +KFV A P G + +E ++ L IIS
Sbjct: 944 DRNLLQAPGAGLRKQAGGSSMRKKFVFATPTLGLTVKRRTQAATTYEIENIRAGLEAIIS 1003
Query: 1059 EGGAA-VASSVFVATVKSLGPRTQQLQIEDWLALL-EDEYLSEEMMELTARALERGNGEW 1116
+ V V ++G L +D LL L++ ++E A G EW
Sbjct: 1004 QKQEEDCVFDVVCNLVDAMGEACASLTRDDAEYLLGRFSVLADSVLETLATIASSGI-EW 1062
Query: 1117 STDAA 1121
+ +AA
Sbjct: 1063 TAEAA 1067
>gi|18653813|ref|NP_570747.1| ssDNA binding protein [Macaca mulatta
rhadinovirus]
gi|4494911|gb|AAD21333.1| ssDNA binding protein [Macaca mulatta
rhadinovirus 17577]
gi|7329994|gb|AAF59983.1|AF210726_4 ssDBP [Macaca mulatta
rhadinovirus 26-95]
Length = 1132
Score = 246 bits (629), Expect = 1e-63
Identities = 286/1200 (23%), Positives = 482/1200 (39%), Gaps = 135/1200 (11%)
Query: 12 KVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGS 71
+ P G GYVYA + ++L R S V P++ GLTVE F V
Sbjct: 18 RAPIGACGYVYAYSKQDFPFAEASILGNRPSGSGVFSLPILYGLTVEHEFPLTVKAAYKK 77
Query: 72 RTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPR 131
T T +++K+T H V VFH P L LCE AR FG++ +
Sbjct: 78 VDT----TTLAVKVTCFH--REVIVFHNASLFRPVFDGTGLNELCEEARALFGYTQFI-E 130
Query: 132 PGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEV 191
PG H C +L D D L +VVTEGFKE + + + +V I G +
Sbjct: 131 PGP-PHSIWNPLECPQLP-DKDEMFLGVVVTEGFKERLWRGCLVPAVFQTQQVQIAGRQA 188
Query: 192 HRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVA 251
++P+Y LF P R+ F+++ ++ L++++ A A
Sbjct: 189 FKVPLYDEDLFAPHGHRMPR-------------------FYHKDVSAYLYDSLFTSIAQA 229
Query: 252 LRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFE 311
LR ++V AV A ++++ A + + F + KT G
Sbjct: 230 LRLKDVTAVIHATEKQFMQDHYKIAKI---VQAKQFSTTLPKTTDG-------------- 272
Query: 312 QRLASVMAGDAALALESIVSMAVFDEPPTDI------SAWPLFEGQDTAAARANAVGAYL 365
+S M D+ +A ++ +F E P D +WP+F+G D+ AR NA+ +
Sbjct: 273 ---SSHMIVDSVVAELALSYGCMFLECPQDACELLNYDSWPIFDGCDSPEARVNALERWS 329
Query: 366 ARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDREG 425
A A V +F+ NS L+LT+V P K + FFL G + G
Sbjct: 330 AEQAVHVAGQLFAANSVLYLTKVQKQAPRGQKGDVN-VYNSFFLQHGLGFLNEATIKENG 388
Query: 426 HVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDV 485
F+G P+ L G + F HLA FSP LLAK+ +Y++ Q ++
Sbjct: 389 S--EAFKGVPSNALDGSS--FTPYHLAYAASFSPHLLAKLCYYMQFLQHHKSSTNQAFNM 444
Query: 486 FRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSD 545
YV + +++ C LC +T C++T RL+ R P + R V ++D
Sbjct: 445 VHYVGTAANSEM-CTLCHGNTPATCLNTLFYRLKDRFPAVTTPQRRDPYVVTGTAGTFND 503
Query: 546 CDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLET 605
++LGN+A+F R + A + TY + V +L + +
Sbjct: 504 LEILGNFASFR--DREEDGNPADEHPKYTYWQLCQTVTEKLSAI-----GITEDHDNHVN 556
Query: 606 IITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGP 665
+ITN ++ V + +VD EV + + ++++ NF FR+ + +H + + Y P
Sbjct: 557 LITNIQSFLRVFKGIDSIVDGEVMKFVNSMIK-NNFNFREHVKSVHHILQFCCNVYWQAP 615
Query: 666 CPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEG----RNFRNQFQPVLRRRVMDMFNN 721
C + L +S L + QD+ L C G + FQ + +
Sbjct: 616 CAVFLNLYYKSLLWIIQDICLPYCMIYEQDNPAMGILPSEWLKMHFQTLWTNFKAACLDR 675
Query: 722 GFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFAG 781
G L+ L + + + A + +AR + PK +++K+R++F+
Sbjct: 676 GVLTGCELKIVHRDMFCDFFDTDAGSNGLMAPFKMQVRIARAMMVVPKSIKIKNRIIFSN 735
Query: 782 ASANASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLKQFHAAIFPNGKPPGSNQPN 839
+ SEA +QS + KP D ++ GP L H A+FP+ K
Sbjct: 736 TA--GSEA-------VQSGFVKPTGTRDTYVVAGPYMKFLNSLHRALFPDTKTAA----- 781
Query: 840 PQWFWTAL-QRNQLPARLLSRED--IETIAFIKKFSLDYGAINFINLAPNNVSELAMYYM 896
+ W + Q N+ P +D E ++++K SL + N +++ P+++ A +
Sbjct: 782 -LYLWHKISQTNKTPVLKDVPDDELAELVSYVKTNSLAFEETNVLDVVPDSLMSYARIKL 840
Query: 897 ANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHP 956
ILR C ++ TL + P +Q A G + A A A A
Sbjct: 841 NGAILRACGQIQFYATTLHCL------TPVLQTIDAEEYPHVLG--SAAIATPVAYLAEI 892
Query: 957 GAWTSMFASCNLLRPVMAA---RPMVVLGLSISKYYGMAGNDRVFQAGNWASLMG---GK 1010
T++ +PV A RP++ + + ++KY G+ GN+ VF GN G +
Sbjct: 893 RGRTALTVQTTARQPVAATGRLRPVITVPMVVNKYTGVNGNNNVFHCGNLGYFAGRGVDR 952
Query: 1011 NACP-LLIFDRT-------RKFVLACPRAGFVC--AASSLGGGAHESSLCEQLRGIISE- 1059
N P F +T ++ V+ P + AA S+ ++ ++ +
Sbjct: 953 NLWPESSPFKKTGVSAMLRKRHVMMTPIIDRLIKRAAGQTISTFEAESVKRSVQALLEDK 1012
Query: 1060 GGAAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTD 1119
+ SV + ++ LG Q L ED L D + + + T + + W+ +
Sbjct: 1013 DNPNLLKSVILELIRHLGKGCQDLSSEDVQYYLGDYCMLTDEVLFTLDNIAQSGVPWTIE 1072
Query: 1120 AALEVAHEAEALVSQLGNAGEVFNFGDFGCEDDNATPFGGP-------GAPGPAFAGRKR 1172
+A AL+ +A ++ F DD AT P + G AG+KR
Sbjct: 1073 -------DAGALIEDRQDADDL----QFVDSDDIATASCQPPEEQLPTPSAGALLAGKKR 1121
>gi|13095583|ref|NP_076498.1| single-stranded DNA-binding protein MDBP
[Bovine herpesvirus 4]
gi|12802533|gb|AAK07925.1|AF318573_5 single-stranded DNA-binding
protein MDBP [Bovine herpesvirus 4]
Length = 1134
Score = 246 bits (629), Expect = 1e-63
Identities = 257/1021 (25%), Positives = 432/1021 (42%), Gaps = 113/1021 (11%)
Query: 12 KVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGS 71
K P GP GY+Y + + +LL + V PL+ GLTVE GF NV V
Sbjct: 18 KAPIGPCGYIYVYKKETFPTKEASLLGNGFPGTSVMSVPLLFGLTVEPGFPINVKAVHKK 77
Query: 72 RTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPR 131
T T VS+K+T H V +F P L +LC+ R FGF+ Y+P
Sbjct: 78 IDT----TTVSVKVTSYH--REVIMFSNIDCFTPIFHGTGLPQLCQETRDLFGFTHYSP- 130
Query: 132 PGDLKHETTGEALCERLGLDP--DRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGA 189
P ++ + + + LC G D D +L +V+TEGFKE + + LG ++V I
Sbjct: 131 PSNITNNISLQDLC---GTDNCIDEWILGVVITEGFKERLYHGHMIPLLGHVEEVQISPQ 187
Query: 190 EVHR-IPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPA 248
R IP+Y LF R + F + +++ LF ++
Sbjct: 188 HAARKIPLYDEDLFSKIAPRDMKR------------------FHSVDVSQYLFNSLYTAI 229
Query: 249 AVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAG 308
A A+R ++V V +A + H+ +P + F +S + P G
Sbjct: 230 AQAIRVKDVATVIQAMESQFVRDQHK---MPKVVHKKDFPSSSSRGPDG----------- 275
Query: 309 GFEQRLASVMAGDAALALESIVSMAV-FDEPPTDISA------WPLFEGQDTAAARANAV 361
S+M D+ +A E VS + F + P D+SA WP+F T R A+
Sbjct: 276 ------LSLMIMDS-VASELAVSYGLSFIDAPQDMSALLDYTSWPIFVDCITEEDRLQAL 328
Query: 362 GAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQV 421
A+ + + V +FSTNS L+LT + P K + ++L G +
Sbjct: 329 HAWNLKQSIHVNTQLFSTNSMLYLTRIQKQNPKTAKGDLNV-YNSYYLQHGLSYLSEATQ 387
Query: 422 DREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQ 481
D G P F+G + L G T + HLA P LA+ +YL+ C Q
Sbjct: 388 DEYGQ--PVFQGVQSNLLSGST--YTIHHLAYAASMCPNTLARYCYYLQFCQHQKSTQNQ 443
Query: 482 EMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNS 541
++ YV + +D+ CNLC C++T RLR R P ++ R +
Sbjct: 444 SYNISNYVGTAASSDM-CNLCQGKKPAVCINTLFYRLRDRFPPIITSHRRDPYIITGSVG 502
Query: 542 MYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMG 601
MY+D D+LGN+A+F ++ D + + TY T+ ++ +LE + D P
Sbjct: 503 MYNDLDILGNFASFR--EKEDEGAQVEEVQKYTYWQLTQTLLEKLEGMGIKDTTPP---- 556
Query: 602 RLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPY 661
E ++++ + V ++ VD EV + + +V+ N FR+ + +H + + +
Sbjct: 557 --EKLVSDIPSFIKVFKDIDAHVDTEVLKFINCMVK-NNINFRETIKSIHHVIQYCCNVF 613
Query: 662 ACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRN----FRNQFQPVLRRRVMD 717
A PCP+ L +S L + QD+ L C S G + +Q +
Sbjct: 614 AQPPCPVFLQLYYKSILTIIQDVCLPNCMMYEQDNSSMGMGPTEWLKMHYQTLWTNFKGC 673
Query: 718 MFNNGFLSAKTLTVALSEGAA--ICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKS 775
F+ G L+ L V S+ + G +P ++ ++R L PK +++K+
Sbjct: 674 CFDRGVLTGAELKVMHSDPFCDFFDVDAAINGIFSPTKTQVR--ISRAMLVVPKTIKIKN 731
Query: 776 RVLFAGASANASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLKQFHAAIFPNGKPP 833
R++F+ +S SEA +QS + K + D I+ GP L +H +FP K
Sbjct: 732 RIIFSNSS--GSEA-------IQSGFLKSGSKKDNYIVTGPYMKFLNIYHKIMFPQTK-- 780
Query: 834 GSNQPNPQWFW-TALQRNQLPARL-LSREDIETIA-FIKKFSLDYGAINFINLAPNNVSE 890
+ + W T + Q+P + ++ + +A +I+ S + I+ +++ P+N+
Sbjct: 781 ----MSSLFMWHTFSTKKQIPLITGVPKDQLVALANYIEYNSKLHSEIDVLDIIPDNLIT 836
Query: 891 LAMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMD 950
A + N ILR C + ++ TL ++ R P + + G E + + +
Sbjct: 837 YAKIKLNNAILRACGQTQFYSTTLHCLVPTVRTVPGEEYPHVLENEEFLGTEQYLKLVQN 896
Query: 951 AVDAHPGAWTSMFASCNLLRPVM---AARPMVVLGLSISKYYGMAGNDRVFQAGNWASLM 1007
T+ L V RP++ + + I+KY G+ GN+ +F GN M
Sbjct: 897 R--------TAQIVQATLKEDVAQMGKLRPIITVPMVINKYTGINGNNGIFHCGNLGYFM 948
Query: 1008 G 1008
G
Sbjct: 949 G 949
>gi|30348509|emb|CAC84301.1| major DNA-binding protein [Saimiriine
herpesvirus 2]
Length = 1128
Score = 243 bits (619), Expect = 2e-62
Identities = 282/1164 (24%), Positives = 480/1164 (41%), Gaps = 134/1164 (11%)
Query: 1 METKPKTATTI--KVPPGPLGYVYARACPSEGIEL--LALLSARSGDSDVAVAPLVVGLT 56
M+T +A + + P P GY+Y P EG +LL ++ +D PL+ GLT
Sbjct: 3 MKTAQPSADNLGSRAPVEPCGYIYVY--PKEGFPFKEASLLGNKNVGADAMSLPLLSGLT 60
Query: 57 VESGFEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLC 116
VES F NV V +L + S Y VF +P P L LC
Sbjct: 61 VESNFSFNVKAVHKKIDM------TTLLVRVSAYHREAIVFFNTDLFEPIFVGPGLDNLC 114
Query: 117 ERARRHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFL 176
AR FG++ + PR DL+ + L D + +VVTEGFKE + N
Sbjct: 115 SDARSLFGYTTFVPRT-DLRDTVDIKDLYAPF-YSKDSCFMAVVVTEGFKERLYFGNLVP 172
Query: 177 HLGGSDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRP- 235
+ KV I G E +IP+Y LF LP F P
Sbjct: 173 IIAQGLKVQINGREAVKIPLYDEDLFSKSHEH--------------------LPRFYIPS 212
Query: 236 LNRLLFEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTP 295
+++ L ++V A ALR R+V++V RA+ + + ++ A + + F K
Sbjct: 213 VSKYLHDSVFTSIAQALRIRDVESVIRASEKQSIQDQYKLAKI---VNSKDFSLQLVKC- 268
Query: 296 RGGRDGGGKGAAGGFEQRLASVMAGD---AALALESIVSMAVFDEPPT---DISAWPLFE 349
Q ++ M D A LA+ +S + P D ++WP+FE
Sbjct: 269 ----------------QDASAFMVIDCIAAELAMSYGLSFLEAPQDPCAVLDYTSWPIFE 312
Query: 350 GQDTAAARANAVGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFL 409
+T R A+ + A + V +FSTNS L+LT+++ + + + + Y F+
Sbjct: 313 TTETEEDRIKAIQDWNAMMSVHVYTHLFSTNSVLYLTKINKQTQSSKSEQNVYNTY--FM 370
Query: 410 VPGTHVAANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYL 469
G AA+ G P F G P GGT + HLA+ FSP LLA+ +Y+
Sbjct: 371 QHGLAYAADATQRENGE--PAFSGAPK--FSGGT--YTLYHLALASSFSPHLLARNCYYM 424
Query: 470 ERCDGAVIVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAA 529
+ C V +YV + +D+ C LC +C+HT RL+ R P +
Sbjct: 425 QFCQHQKSTTNANYSVPQYVGTAAASDM-CELCQGTCPASCIHTLFYRLKDRFPPVLGSQ 483
Query: 530 RGAIGVFGTMNSMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETL 589
R V ++ Y+D D+LGN+A F ++ D + + TY + V+ +L T+
Sbjct: 484 RRDPYVVTGVSGQYNDLDMLGNFATFR--EKEDEAVQNAESEKYTYWQLIQNVVEKLSTI 541
Query: 590 QYVDQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGE 649
+ V + +IT+ ++ ++ +VD EV + M LV+ N FR+ +
Sbjct: 542 GITEGTVGS------ELITDIQSFLKTFRDIDNIVDSEVVKFMNCLVK-NNINFRETIKA 594
Query: 650 ANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQP 709
+H + + + PC L +S LA+ QD+ L + + +++
Sbjct: 595 VHHVLHYCCNVFWQAPCATFLNLFYKSILAIIQDICLPIAM-TYEQDNPSIGMMPSEWLK 653
Query: 710 VLRRRVMDMFNNGFLSAKTLTVA---LSEGAAIC----APSLTAGQTAPAESSFEGDVAR 762
V + + F + L LT + + C S +GQ P + +++
Sbjct: 654 VHYQTIWTNFKSSCLDRGVLTGSEHKIVHTDMFCDFLNVDSALSGQIVPMKMQVR--LSK 711
Query: 763 VTLGFPKELRVKSRVLFAGASANASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLK 820
L PK +++K+R++F+ +S ++QS + K + D I+ GP L
Sbjct: 712 ALLTVPKTIKIKNRIVFSNSS---------MTETIQSGFIKSATKKDSYIVAGPYMKFLN 762
Query: 821 QFHAAIFPNGKPPGSNQPNPQWFW-TALQRNQLPARL-LSRED-IETIAFIKKFSLDYGA 877
H +FP+ K + + W T Q+ QLP +SRE+ +E +++ S +
Sbjct: 763 SLHKVMFPDAK------ISALYLWHTFSQKKQLPVLPGISRENMVELANYVETSSKMHDD 816
Query: 878 INFINLAPNNVSELAMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQG 937
+N +++ P + A + N ILR C + ++ TL ++ P++Q +A
Sbjct: 817 MNVLDIIPTTLLTYAKVRLNNTILRTCGQTQFYATTLQCLL------PTLQTISATEYPH 870
Query: 938 ---GAGLEAGARALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGN 994
+ + L D H A T + V RP+V + L ++KY G+ GN
Sbjct: 871 VLLNQSIMSVDHYLSSIKDKH--ALTVQTTLKEDIATVGKQRPIVTVPLVVNKYTGINGN 928
Query: 995 DRVFQAGNWASLMG---GKNACP---------LLIFDRTRKFVLACPRAGFVCAASSLGG 1042
++FQ GN MG +N P + R R + A V S+L
Sbjct: 929 TQIFQCGNLGYFMGRGVDRNLIPDSTGFRRQNNSSYMRRRHMFMTPMVAHLVKKNSNLNN 988
Query: 1043 GAHE-SSLCEQLRGIISE-GGAAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEE 1100
E ++ + ++ I + + +V + VKSLG + + +D L + Y+ +
Sbjct: 989 LTFEVETIRKNVQNIFEDKDNLNIFDNVVLELVKSLGDGCENITEDDLQFYLGEYYIMSD 1048
Query: 1101 MMELTARALERGNGEWSTDAALEV 1124
+ + + WS ++ +V
Sbjct: 1049 EIWSRFQIITDSRAPWSVESVTKV 1072
>gi|9625962|ref|NP_040208.1| major ssDNA-binding protein [Saimiriine
herpesvirus 2]
gi|118751|sp|P24910|DNBI_HSVSA Major DNA-binding protein
gi|74048|pir||DNBEM1 DNA-binding protein - saimiriine herpesvirus 1
(strain 11)
gi|60327|emb|CAA45629.1| major ssDNA-binding protein [Saimiriine
herpesvirus 2]
gi|331054|gb|AAA46162.1| major DNA binding protein
Length = 1128
Score = 241 bits (614), Expect = 8e-62
Identities = 282/1152 (24%), Positives = 475/1152 (40%), Gaps = 134/1152 (11%)
Query: 12 KVPPGPLGYVYARACPSEGIEL--LALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVV 69
+ P P GY+Y P EG +LL ++ + PL+ LTVES F NV V
Sbjct: 16 RAPVEPCGYIYVY--PKEGFPFKEASLLGNKNVGASAMSLPLLSDLTVESNFSFNVKAVH 73
Query: 70 GSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYT 129
+L + S Y VF +P P L LC AR FG++++
Sbjct: 74 KKIDM------TTLLVRVSAYHREAIVFFNTDLFEPIFVGPGLDILCSDARSLFGYTNFV 127
Query: 130 PRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGA 189
PR DL+ + L D + +VVTEGFKE + N + KV I G
Sbjct: 128 PRT-DLRDTVDIKDLYAPF-YSEDSCFMAVVVTEGFKERLYFGNLVPIIAQGLKVQINGR 185
Query: 190 EVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRP-LNRLLFEAVVGPA 248
E +IP+Y LF LP F P +++ L ++V
Sbjct: 186 EAVKIPLYDEDLFSKSHEH--------------------LPRFYIPSVSKYLHDSVFTSI 225
Query: 249 AVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAG 308
A ALR R+V++V RA+ + + ++ A + + F K
Sbjct: 226 AQALRIRDVESVIRASEKQSIQDQYKLAKI---VNSKDFSLQSVKC-------------- 268
Query: 309 GFEQRLASVMAGD---AALALESIVSMAVFDEPPT---DISAWPLFEGQDTAAARANAVG 362
Q ++ M D A LA+ +S + P D ++WP+FE +T R A+
Sbjct: 269 ---QDASAFMVIDCIAAELAMSYGLSFLEAPQDPCAVLDYTSWPIFETAETEEDRIKAIQ 325
Query: 363 AYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVD 422
+ A + V +FSTNS L+LT+++ ++ + + + Y F+ G AA+
Sbjct: 326 DWNAMMSVHVYTHLFSTNSVLYLTKINKQTQSNKSEQNVYNTY--FMQHGLAYAADATQR 383
Query: 423 REGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQE 482
G P F G P GGT + HLA+ FSP LLA+ +Y++ C
Sbjct: 384 ENGE--PAFSGAPK--FSGGT--YTLYHLALASSFSPHLLARNCYYMQFCQHQKSTTNAN 437
Query: 483 MDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSM 542
V +YV + +D+ C LC +C+HT RL+ R P + R V ++
Sbjct: 438 YSVPQYVGTAAASDL-CELCQGTCPASCIHTLFYRLKDRFPPVLGSQRRDPYVVTGVSGQ 496
Query: 543 YSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGR 602
Y+D D+LGN+A F ++ D + + TY + V+ +L T+ + V +
Sbjct: 497 YNDLDMLGNFATFR--EKEDEAVQNAESEKYTYWQLIQNVVEKLSTMGVTEGTVGS---- 550
Query: 603 LETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYA 662
+IT+ ++ ++ VVD EV + M LV+ N FR+ + +H + + +
Sbjct: 551 --ELITDIQSFLKTFRDIDNVVDSEVVKFMNCLVK-NNINFRETIKTVHHVLHYCCNVFW 607
Query: 663 CGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFNNG 722
PC + L +S LA+ QD+ L + + +++ V + + F +
Sbjct: 608 QAPCAMFLNLFYKSVLAIIQDICLPIAM-TYEQDNPSIGMMPSEWLKVHYQTIWTNFKSS 666
Query: 723 FLSAKTLTVA---LSEGAAIC----APSLTAGQTAPAESSFEGDVARVTLGFPKELRVKS 775
L LT + + C S +GQ P + +A+ L PK +++K+
Sbjct: 667 CLDRGVLTGSEHKIVHTDMFCDFLNIDSALSGQIVPMKMQVR--LAKALLTVPKTIKIKN 724
Query: 776 RVLFAGASANASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLKQFHAAIFPNGKPP 833
R++F+ +S ++QS + K + D I+ GP L H +FPN K
Sbjct: 725 RIVFSNSS---------MTETIQSGFIKSATKKDSYIVTGPYMKFLNSLHKVMFPNAK-- 773
Query: 834 GSNQPNPQWFW-TALQRNQLPARL-LSRED-IETIAFIKKFSLDYGAINFINLAPNNVSE 890
+ + W T Q+ QLP +SRE+ +E +++ S + +N +++ P +
Sbjct: 774 ----ISALYLWHTFSQKKQLPVLPGISRENMVELANYVETSSKMHDDMNVLDIIPTTLLT 829
Query: 891 LAMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQG---GAGLEAGARA 947
A + N ILR C + ++ TL ++ P++Q +A + +
Sbjct: 830 YAKVRLNNTILRTCGQTQFYATTLQCLL------PTLQTISATEYPHVLLDQSIMSVDHY 883
Query: 948 LMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLM 1007
L D H A T + V RP+V + L ++KY G+ GN ++FQ GN M
Sbjct: 884 LSSIKDKH--ALTVQTTLKEDIATVGKQRPIVTVPLVVNKYTGINGNTQIFQCGNLGYFM 941
Query: 1008 GGKNACPLLIFDRT------------RKFVLACPR-AGFVCAASSLGGGAHE-SSLCEQL 1053
G+ LI D T R+ V P A V S+L E ++ + +
Sbjct: 942 -GRGVDRNLIPDSTGFRRQNNSSYMRRRHVFMTPMVAHLVKKNSNLNNLTFEVETIRKNV 1000
Query: 1054 RGIISE-GGAAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERG 1112
+ I + + +V + VK LG + + +D L + Y+ + + + +
Sbjct: 1001 QNIFEDKDNLNIFDNVVLELVKGLGDSCENITEDDLQFYLGEYYIMSDEIWSRFQIITDS 1060
Query: 1113 NGEWSTDAALEV 1124
WS + +V
Sbjct: 1061 GAPWSVENVTKV 1072
>gi|13249148|gb|AAK16699.1|AF324455_3 6 [murid herpesvirus 4]
Length = 1103
Score = 240 bits (613), Expect = 1e-61
Identities = 274/1134 (24%), Positives = 457/1134 (40%), Gaps = 129/1134 (11%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
MET T + P GP GY+Y + +E +LLS + + PLV GLTVE G
Sbjct: 1 MET---TNVCSQAPLGPAGYIYYQLVDDFPLEEASLLSTNFTSAKACLLPLVTGLTVEPG 57
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
F NV SL + P+ Y + VFH + P L +LCE R
Sbjct: 58 FNFNVKAPCQKI------MFESLTVKPTKYFNHAIVFHNSNKIPPIFHGRGLEQLCEATR 111
Query: 121 RHFGFSDYTP--RPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHL 178
FGFS + P G K T L +P++ + ++VV E FKE + +
Sbjct: 112 LMFGFSSFKPDASKGQWKSST-------HLPQNPEKYIGWVVVAESFKERLICGELAMLS 164
Query: 179 GGSDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNR 238
VTI ++P++ + D LPF++ ++R
Sbjct: 165 APMKTVTINNKLCFKVPLHDTRFLSSD---------------------QLLPFYDENVSR 203
Query: 239 LLFEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGG 298
+++E+ A A+R R+V + A A E ++ A L + T+ A
Sbjct: 204 IMYESYYTNVAQAVRIRDVTGLIEALQERAVTEQYKTAKLASLKTYPAENC--------- 254
Query: 299 RDGGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPP-TDISAWPLFEGQDTAAAR 357
AG E + + A++ A +E P + WP+F T R
Sbjct: 255 -------GAGNLEYAVIDAAVSELAVSHGLAFLEAPQEESPIQNYVQWPMFSEDATPEGR 307
Query: 358 ANAVGAYLARAAGLVGAMVFSTNSALHLTEV-DDAGPADPKDHSKPSFYRFFLVPGT-HV 415
A+ + A+ A V A V S NS L++T+V AG A R+++ G H+
Sbjct: 308 IKALQEWNAKMAIHVHAQVLSANSVLYVTKVGQSAGKAVGGKQDDMFLSRYYMQHGLGHL 367
Query: 416 AANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGA 475
N Q E + V F G P + + G ++ HLA SP +LA++ +YL+ C
Sbjct: 368 --NVQTRDENNTVV-FPGVPDSCMNG--SQYTVHHLAYAASMSPHILARLCYYLQMCQNQ 422
Query: 476 VIVGR-QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIG 534
+ Q V YV + T + C+LC D C+HT RLR R P+ + +
Sbjct: 423 RLASTPQGTTVPAYVTTTANTSM-CDLCGGDLPAVCLHTLFFRLRDRFPQVLATQKRDPY 481
Query: 535 VFGTMNSMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQ 594
V + ++D ++LGN+ +F ++ D E + + +Y + LE + V
Sbjct: 482 VVTGIAGPHNDMEILGNFGSFK--EKDDDQENGQ---RYSYWQLNANLTERLEEIG-VTA 535
Query: 595 AVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAM 654
+ P +IT+ ++ TV + +VD E + LV N +++ + H +
Sbjct: 536 STPACQ-----LITDVDSFLTVFKKIDAIVDEETIRFNDGLVR-NNINYKESVKSIAHVL 589
Query: 655 SLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVE----GRNFRNQFQPV 710
L + PCP++ L RS + QD++ C + N FQ +
Sbjct: 590 QLQCNTNWLPPCPIIHNLFTRSFFTILQDMSFPLCVTHHTENPLNYGTVSTWMSNHFQNL 649
Query: 711 LRRRVMDMFNNGFLSAKTLTVALSEGAA---ICAPSLTAGQTAPAESSFEGDVARVTLGF 767
F+ G L+ + V +E ++ A L + A ++R +
Sbjct: 650 WSNFKSIWFDKGLLTCSDMRVVHTETSSDMENLAADLPKQRCAIR-------LSRAQIFA 702
Query: 768 PKELRVKSRVLFAGASANASEAAKARVASLQSAYQKPDKRVD-ILLGPLGFLLKQFHAAI 826
PK L++K+R++F+ +S+ SL +++ K K + I GP L Q H +
Sbjct: 703 PKALKIKNRIIFSNSSS---------TESLSASFVKAGKAENPITAGPYMHFLTQLHKQL 753
Query: 827 FPNGKPPGSNQPNPQWFW-TALQRNQLP--ARLLSREDIETIAFIKKFSLDYGAINFINL 883
FP K + W T + +LP +++ E I+++ SL + +N ++
Sbjct: 754 FPTTK------TGAYYIWQTFMSSKKLPQAGSTNAKKLSEFISYLMTSSLAHDEVNVLDY 807
Query: 884 APNNVSELAMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEA 943
P + A + N ILR C + ++ T+ + PS+ + G
Sbjct: 808 VPTTLMAYAKQRLNNAILRLCGQTQFYATTINFLQPTILSMPSLD----YPHVAGPVPVQ 863
Query: 944 GARALMDAVDAHPGAWTSMFASCNL-LRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGN 1002
MD + T + +SC V RP+V + + ++KY G GN+ +FQ+GN
Sbjct: 864 DLTTYMDM--TRDQSATVIQSSCREDPAAVCKMRPIVTIPMMVNKYSGSNGNNSIFQSGN 921
Query: 1003 WASLMG-GKNACPLLIFDRTRKFVLACPRAGFVCAA-------SSLGGGAHESSLCEQLR 1054
MG G + L R RK V R + A+ + G G + E+ R
Sbjct: 922 MGYFMGRGVDRKLLPDIPRMRKHVNTSMRRRYAFASPMTESLLTQPGKGTVRTYQLEKTR 981
Query: 1055 GIISE---GGAAVASSVFVATVKSLGPRTQQLQIED-WLALLEDEYLSEEMMEL 1104
II + G A ++ + VK LG L +D L E ++ ++ME+
Sbjct: 982 KIIHDIIASGNAEPENLVLELVKCLGHECATLTSDDVEFYLGEFSFMVNDVMEV 1035
>gi|9629557|ref|NP_044846.1| ssDNA binding protein [murid herpesvirus
4]
gi|2317927|gb|AAB66385.1| ssDNA binding protein [murid herpesvirus 4]
gi|6625573|gb|AAF19274.1|AF105037_6 6 [murid herpesvirus 4]
Length = 1103
Score = 240 bits (612), Expect = 1e-61
Identities = 274/1134 (24%), Positives = 457/1134 (40%), Gaps = 129/1134 (11%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
MET T + P GP GY+Y + +E +LLS + + PLV GLTVE G
Sbjct: 1 MET---TNVCSQAPLGPAGYIYYQLVDDFPLEEASLLSTNFTSAKACLLPLVTGLTVEPG 57
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERAR 120
F NV SL + P+ Y + VFH + P L +LCE R
Sbjct: 58 FNFNVKAPCQKI------MFESLTVKPTKYFNHAIVFHNSNKIPPIFHGRGLEQLCEATR 111
Query: 121 RHFGFSDYTP--RPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHL 178
FGFS + P G K T L +P++ + ++VV E FKE + +
Sbjct: 112 LMFGFSSFKPDASKGQWKSST-------HLPQNPEKYIGWVVVAESFKERLICGELAMLS 164
Query: 179 GGSDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNR 238
VTI ++P++ + D LPF++ ++R
Sbjct: 165 APMKTVTINNKLCFKVPLHDTRFLSSD---------------------QLLPFYDENVSR 203
Query: 239 LLFEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGG 298
+++E+ A A+R R+V + A A E ++ A L + T+ A
Sbjct: 204 IMYESYYTNVAQAVRIRDVTGLIEALQERAVTEQYKTAKLASLKTYPAENC--------- 254
Query: 299 RDGGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPP-TDISAWPLFEGQDTAAAR 357
AG E + + A++ A +E P + WP+F T R
Sbjct: 255 -------GAGNLEYAVIDAAVSELAVSHGLAFLEAPQEESPIQNYVQWPMFSEDATPEGR 307
Query: 358 ANAVGAYLARAAGLVGAMVFSTNSALHLTEV-DDAGPADPKDHSKPSFYRFFLVPGT-HV 415
A+ + A+ A V A V S NS L++T+V AG A R+++ G H+
Sbjct: 308 IKALQEWNAKMAIHVHAQVLSANSVLYVTKVGQSAGKAVGGKQDDMFLGRYYMQHGLGHL 367
Query: 416 AANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGA 475
N Q E + V F G P + + G ++ HLA SP +LA++ +YL+ C
Sbjct: 368 --NVQTRDENNTVV-FPGVPDSCMNG--SQYTVHHLAYAASMSPHILARLCYYLQMCQNQ 422
Query: 476 VIVGR-QEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIG 534
+ Q V YV + T + C+LC D C+HT RLR R P+ + +
Sbjct: 423 RLASTPQGTTVPAYVTTTANTSM-CDLCGGDLPAVCLHTLFFRLRDRFPQVLATQKRDPY 481
Query: 535 VFGTMNSMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQ 594
V + ++D ++LGN+ +F ++ D E + + +Y + LE + V
Sbjct: 482 VVTGIAGPHNDMEILGNFGSFK--EKDDDQENGQ---RYSYWQLNANLTERLEEIG-VTA 535
Query: 595 AVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAM 654
+ P +IT+ ++ TV + +VD E + LV N +++ + H +
Sbjct: 536 STPACQ-----LITDVDSFLTVFKKIDAIVDEETIRFNDGLVR-NNINYKESVKSIAHVL 589
Query: 655 SLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVE----GRNFRNQFQPV 710
L + PCP++ L RS + QD++ C + N FQ +
Sbjct: 590 QLQCNTNWLPPCPIIHNLFTRSFFTILQDMSFPLCVTHHTENPLNYGTVSTWMSNHFQNL 649
Query: 711 LRRRVMDMFNNGFLSAKTLTVALSEGAA---ICAPSLTAGQTAPAESSFEGDVARVTLGF 767
F+ G L+ + V +E ++ A L + A ++R +
Sbjct: 650 WSNFKSIWFDKGLLTCSDMRVVHTETSSDMENLAADLPKQRCAIR-------LSRAQIFA 702
Query: 768 PKELRVKSRVLFAGASANASEAAKARVASLQSAYQKPDKRVD-ILLGPLGFLLKQFHAAI 826
PK L++K+R++F+ +S+ SL +++ K K + I GP L Q H +
Sbjct: 703 PKALKIKNRIIFSNSSS---------TESLSASFVKAGKAENPITAGPYMHFLTQLHKQL 753
Query: 827 FPNGKPPGSNQPNPQWFW-TALQRNQLP--ARLLSREDIETIAFIKKFSLDYGAINFINL 883
FP K + W T + +LP +++ E I+++ SL + +N ++
Sbjct: 754 FPTTK------TGAYYIWQTFMSSKKLPQAGSTNAKKLSEFISYLMTSSLAHDEVNVLDY 807
Query: 884 APNNVSELAMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEA 943
P + A + N ILR C + ++ T+ + PS+ + G
Sbjct: 808 VPTTLMAYAKQRLNNAILRLCGQTQFYATTINFLQPTILSMPSLD----YPHVAGPVPVQ 863
Query: 944 GARALMDAVDAHPGAWTSMFASCNL-LRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGN 1002
MD + T + +SC V RP+V + + ++KY G GN+ +FQ+GN
Sbjct: 864 DLTTYMDM--TRDQSATVIQSSCREDPAAVCKMRPIVTIPMMVNKYSGSNGNNSIFQSGN 921
Query: 1003 WASLMG-GKNACPLLIFDRTRKFVLACPRAGFVCAA-------SSLGGGAHESSLCEQLR 1054
MG G + L R RK V R + A+ + G G + E+ R
Sbjct: 922 MGYFMGRGVDRKLLPDIPRMRKHVNTSMRRRYAFASPMTESLLTQPGKGTVRTYQLEKTR 981
Query: 1055 GIISE---GGAAVASSVFVATVKSLGPRTQQLQIED-WLALLEDEYLSEEMMEL 1104
II + G A ++ + VK LG L +D L E ++ ++ME+
Sbjct: 982 KIIHDIIASGNAEPENLVLELVKCLGHECATLTSDDVEFYLGEFSFMVNDVMEV 1035
>gi|9631197|ref|NP_047980.1| major ssDNA binding protein [Ateline
herpesvirus 3]
gi|11278305|pir||T42922 major single-stranded DNA binding protein -
ateline herpesvirus 3 (strain 73)
gi|4019233|gb|AAC95531.1| major ssDNA binding protein [Ateline
herpesvirus 3]
Length = 1128
Score = 239 bits (611), Expect = 2e-61
Identities = 275/1149 (23%), Positives = 480/1149 (40%), Gaps = 128/1149 (11%)
Query: 12 KVPPGPLGYVYARACPSEGIEL--LALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVV 69
+ P G GY+Y P EG +LL R+ +D PL+ GLTVE+ F NV V
Sbjct: 16 RAPVGACGYIYVY--PKEGFPFQEASLLGNRNVGADAMSLPLLSGLTVEANFSFNVKAV- 72
Query: 70 GSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYT 129
+ T +S+++ S Y VF P P L LC AR FG++ +T
Sbjct: 73 ---HKKIDMTTLSVRV--SAYHREAIVFFNTNFFTPIFFGPGLDSLCSDARNLFGYTSFT 127
Query: 130 PRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGA 189
PR DLK + L D + +VVTE FKE + N + KV I G
Sbjct: 128 PR-HDLKDLIDIKDLYAPF-YTKDSCFMSVVVTESFKERLYFGNLVPLISQGQKVQINGR 185
Query: 190 EVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAA 249
E +IP+Y L F+ +H + + +P ++ L+ LF ++ A
Sbjct: 186 EAVKIPLYDEDL------------FSKSHEHLPR---FYIPSVSKYLHDSLFTSI----A 226
Query: 250 VALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGG 309
ALR R+V++V RA + + ++ A + F A +A +
Sbjct: 227 QALRIRDVESVIRAIEKQSIHDQYKLAKVVNSKEF-ALQAVKC----------------- 268
Query: 310 FEQRLASVMAGDAALALESIVSMAVFDEPP------TDISAWPLFEGQDTAAARANAVGA 363
Q ++ M D A +I F E P D ++WP+F+ +T R A+
Sbjct: 269 --QDASAFMVIDCIAAELAISYGLSFLETPQEPCALLDYTSWPIFDTTETEEGRIKAIQD 326
Query: 364 YLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDR 423
+ A + V +FSTNS L+LT+++ + D + + +F+ G AA
Sbjct: 327 WNAMMSVHVYTHLFSTNSVLYLTKINKQTQTNKSDQN--IYNSYFMQHGLSYAAEATQKE 384
Query: 424 EGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEM 483
G P F G GG+ + HLA+ FSP LLA+ +Y++ C
Sbjct: 385 NGD--PAFSG--AVKFNGGS--YTLFHLALASSFSPHLLARNCYYMQFCQHQKSTTNSNY 438
Query: 484 DVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMY 543
V +YV +++ C LC AC+HT RL+ R P S+ R V ++ Y
Sbjct: 439 SVAQYVGTVAVSEL-CELCQGKCPAACIHTLFYRLKDRFPPVLSSQRRDPYVVTGVSGQY 497
Query: 544 SDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRL 603
+D D+LGN+A F ++ D + TY + V+ +L T+ + + +
Sbjct: 498 NDLDMLGNFATFR--EKEDDMVQNTECEKYTYWQLIQNVVEKLATIGITEGTLGS----- 550
Query: 604 ETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYAC 663
+IT+ ++ + VVD EV + + LV+ N FR+ + +H + + +
Sbjct: 551 -DLITDIQSFLKTFREIDNVVDNEVIKFINCLVK-NNINFRETIKGVHHVLHYCCNVFWQ 608
Query: 664 GPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFNNGF 723
PC + L +S LA+ QD+ L ++ + +++ + + + F +
Sbjct: 609 APCAMFLNLFYKSVLAIIQDICLPVAM-IYEQDNPSMGMMPSEWLKMHYQTIWTNFKSSC 667
Query: 724 LSAKTLTVA---LSEGAAIC----APSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSR 776
+ LT A + G C S GQ P + +A+ + PK +++K+R
Sbjct: 668 IDKGVLTGAEHKVVHGDMFCDFINVDSALNGQIVPVKMQVR--LAKALITVPKTIKIKNR 725
Query: 777 VLFAGAS-ANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGS 835
++F+ +S A +A R ++ + +Y I+ GP L H IFP+ K
Sbjct: 726 IVFSNSSMTEAIQAGFIRSSTKKDSY--------IVTGPYMKFLNSLHKVIFPDAK---- 773
Query: 836 NQPNPQWFW-TALQRNQLPARL-LSREDIETIA-FIKKFSLDYGAINFINLAPNNVSELA 892
+ + W T Q+ Q+P +S+E+I +A +I+ S + +N +++ P + A
Sbjct: 774 --ISALYLWHTFSQKRQIPVLPGISKENIIELANYIEAGSKMHDDMNVLDIIPTTLLAYA 831
Query: 893 MYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAV 952
+ N ILR C + ++ TL ++ P++Q +A + L + +D
Sbjct: 832 KVRLNNTILRTCGQTQFYATTLQCLL------PTLQVVSA--TEYPHVLHQQSITSVDDY 883
Query: 953 DAHPGAWTSMFASCNLLRPVMAA---RPMVVLGLSISKYYGMAGNDRVFQAGNWASLMG- 1008
+ ++ L + RP+V + L ++KY G+ GN ++FQ GN MG
Sbjct: 884 LSSIKNKQALIVQTTLKEDIATIGKHRPIVTVPLVVNKYTGINGNTQIFQCGNLGYFMGR 943
Query: 1009 --GKNACP---------LLIFDRTRKFVLACPRAGFVCAASSLGGGAHE-SSLCEQLRGI 1056
+N P + R R + A + S+L E ++ + ++ I
Sbjct: 944 GVDRNLIPDSSGFRRQNNSAYMRKRHIFMTPIVANLLKRTSNLNNLTFEVETIRKNVQTI 1003
Query: 1057 ISE-GGAAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGE 1115
+ + +V + VK LG + + +D L D Y+ + + + L
Sbjct: 1004 FDDKDNLNIFDNVVIELVKGLGESCENMTEDDLQFYLGDYYIMSDEIWSRFQLLTDSGTP 1063
Query: 1116 WSTDAALEV 1124
WS ++ ++
Sbjct: 1064 WSVESVTKI 1072
>gi|2246478|gb|AAB62603.1| ORF 06, major ssDNA binding protein homolog
[Human herpesvirus 8]
Length = 1132
Score = 237 bits (605), Expect = 9e-61
Identities = 244/1019 (23%), Positives = 414/1019 (39%), Gaps = 114/1019 (11%)
Query: 14 PPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGSRT 73
P GP GY+YA + I +LL ++ V PL+ GLTVES F NV V
Sbjct: 18 PTGPCGYLYAYLTHNFPIGEASLLGNGYPEAKVFSLPLLHGLTVESDFPLNVKAVHKK-- 75
Query: 74 TGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPRPG 133
+ T S+KLT H + VFH P Q L +LC +R FGFS + +
Sbjct: 76 --IDATTASVKLTSYHREA--IVFHNTHLFQPIFQGKGLEKLCRESRELFGFSTFVEQ-- 129
Query: 134 DLKHETT--GEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEV 191
+H+ T C +L + + ++VTEGFKE + + V IG +
Sbjct: 130 --QHKGTLWSPEACPQLPC-ANEIFMAVIVTEGFKERLYGGKLVPVPSQTTPVHIGEHQA 186
Query: 192 HRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVA 251
+IP+Y LF P ++ + F+N ++R L +++ A A
Sbjct: 187 FKIPLYDEDLFGPSRAQELCR------------------FYNPDISRYLHDSIFTGIAQA 228
Query: 252 LRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFE 311
LR ++V V +A+ H+ +P + F + G DG
Sbjct: 229 LRVKDVSTVIQASERQFV---HDQYKIPKLVQAKDFPQCASR----GTDG---------- 271
Query: 312 QRLASVMAGDAALALESIVSMAVFDEPPTD------ISAWPLFEGQDTAAARANAVGAYL 365
+++M D+ +A + F E P D WP+FE +T AR A+ +
Sbjct: 272 ---STLMVIDSLVAELGMSYGLSFIEGPQDSCEVLNYDTWPIFENCETPDARLRALEVWH 328
Query: 366 ARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDREG 425
A A +GA +F+ NS L+LT V P + + F+L G + V G
Sbjct: 329 AEQALHIGAQLFAANSVLYLTRVAKL-PQKNQRGDANMYNSFYLQHGLGYLSEATVKENG 387
Query: 426 HVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDV 485
F+G P + L G + + +HLA FSP LLA+M +YL+ Q +V
Sbjct: 388 --ASAFKGVPVSALDGSS--YTLQHLAYASSFSPHLLARMCYYLQFLPHHKNTNSQSYNV 443
Query: 486 FRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSD 545
YV + + + C+LC C++T R++ R P S + V Y+D
Sbjct: 444 VDYVGTAAPSQM-CDLCQGQCPAVCINTLFYRMKDRFPPVLSNVKRDPYVITGTAGTYND 502
Query: 546 CDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLET 605
++LGN+A F +R + + TY + + +L ++ + L T
Sbjct: 503 LEILGNFATFR--EREEEGNPVEDAPKYTYWQLCQNITEKLASM-----GISEGGDALRT 555
Query: 606 IITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGP 665
+I + + V + V+ E+ + + +++ N+ FR+ + +H + + Y P
Sbjct: 556 LIVDIPSFVKVFKGIDSTVEAELLKFINCMIK-NNYNFRENIKSVHHILQFACNVYWQAP 614
Query: 666 CPLLQLLGRRSNLAVYQDLALSQC----HGVFAGQSVEGRNFRNQFQPVLRRRVMDMFNN 721
CP+ L +S L V QD+ L+ C A V + FQ + F+
Sbjct: 615 CPVFLTLYYKSLLTVIQDICLTSCMMYEQDNPAVGIVPSEWLKMHFQTMWTNFKGACFDK 674
Query: 722 GFLSAKTLTVALSEGAAIC----APSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRV 777
G ++ L + + C + G APA +AR L PK +++K+R+
Sbjct: 675 GAITGGELKIV--HQSMFCDLFDTDAAIGGMFAPARMQVR--IARAMLMVPKTIKIKNRI 730
Query: 778 LFAGASANASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLKQFHAAIFPNGKPPGS 835
+F+ ++ S+Q+ + KP + D I+ GP L H +FP S
Sbjct: 731 IFSNSTG---------AESIQAGFMKPASQRDSYIVGGPYMKFLNALHKTLFP------S 775
Query: 836 NQPNPQWFWTAL---QRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELA 892
+ + + W + +N + + E ++K S + IN ++L P+ ++ A
Sbjct: 776 TKTSALYLWHKIGQTTKNPILPGVSGEHLTELCNYVKASSQAFEEINVLDLVPDTLTSYA 835
Query: 893 MYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAV 952
+ + ILR C + ++ TL+ + ++ P+ + G GL + D
Sbjct: 836 KIKLNSSILRACGQTQFYATTLSCLSPVTQLVPAEEYP---HVLGPVGLSS-----PDEY 887
Query: 953 DAHPGAWTSMFASCNLLRPVMA---ARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMG 1008
A + L + V RP++ + L ++KY G GN VF N G
Sbjct: 888 RAKVAGRSVTIVQSTLKQAVSTNGRLRPIITVPLVVNKYTGSNGNTNVFHCANLGYFSG 946
>gi|18845968|ref|NP_572054.1| ORF 6; ss DNA binding protein ssDBP
homolog; EBV BALF2 homolog [Human herpesvirus 8]
gi|1718254|gb|AAC57083.1| ORF 6; ss DNA binding protein ssDBP
homolog; EBV BALF2 homolog [Human herpesvirus 8]
Length = 1133
Score = 237 bits (605), Expect = 9e-61
Identities = 244/1019 (23%), Positives = 414/1019 (39%), Gaps = 114/1019 (11%)
Query: 14 PPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGSRT 73
P GP GY+YA + I +LL ++ V PL+ GLTVES F NV V
Sbjct: 18 PTGPCGYLYAYLTHNFPIGEASLLGNGYPEAKVFSLPLLHGLTVESDFPLNVKAVHKK-- 75
Query: 74 TGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPRPG 133
+ T S+KLT H + VFH P Q L +LC +R FGFS + +
Sbjct: 76 --IDATTASVKLTSYHREA--IVFHNTHLFQPIFQGKGLEKLCRESRELFGFSTFVEQ-- 129
Query: 134 DLKHETT--GEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEV 191
+H+ T C +L + + ++VTEGFKE + + V IG +
Sbjct: 130 --QHKGTLWSPEACPQLPC-ANEIFMAVIVTEGFKERLYGGKLVPVPSQTTPVHIGEHQA 186
Query: 192 HRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVA 251
+IP+Y LF P ++ + F+N ++R L +++ A A
Sbjct: 187 FKIPLYDEDLFGPSRAQELCR------------------FYNPDISRYLHDSIFTGIAQA 228
Query: 252 LRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFE 311
LR ++V V +A+ H+ +P + F + G DG
Sbjct: 229 LRVKDVSTVIQASERQFV---HDQYKIPKLVQAKDFPQCASR----GTDG---------- 271
Query: 312 QRLASVMAGDAALALESIVSMAVFDEPPTD------ISAWPLFEGQDTAAARANAVGAYL 365
+++M D+ +A + F E P D WP+FE +T AR A+ +
Sbjct: 272 ---STLMVIDSLVAELGMSYGLSFIEGPQDSCEVLNYDTWPIFENCETPDARLRALEVWH 328
Query: 366 ARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDREG 425
A A +GA +F+ NS L+LT V P + + F+L G + V G
Sbjct: 329 AEQALHIGAQLFAANSVLYLTRVAKL-PQKNQRGDANMYNSFYLQHGLGYLSEATVKENG 387
Query: 426 HVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDV 485
F+G P + L G + + +HLA FSP LLA+M +YL+ Q +V
Sbjct: 388 --ASAFKGVPVSALDGSS--YTLQHLAYASSFSPHLLARMCYYLQFLPHHKNTNSQSYNV 443
Query: 486 FRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSD 545
YV + + + C+LC C++T R++ R P S + V Y+D
Sbjct: 444 VDYVGTAAPSQM-CDLCQGQCPAVCINTLFYRMKDRFPPVLSNVKRDPYVITGTAGTYND 502
Query: 546 CDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLET 605
++LGN+A F +R + + TY + + +L ++ + L T
Sbjct: 503 LEILGNFATFR--EREEEGNPVEDAPKYTYWQLCQNITEKLASM-----GISEGGDALRT 555
Query: 606 IITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGP 665
+I + + V + V+ E+ + + +++ N+ FR+ + +H + + Y P
Sbjct: 556 LIVDIPSFVKVFKGIDSTVEAELLKFINCMIK-NNYNFRENIKSVHHILQFACNVYWQAP 614
Query: 666 CPLLQLLGRRSNLAVYQDLALSQC----HGVFAGQSVEGRNFRNQFQPVLRRRVMDMFNN 721
CP+ L +S L V QD+ L+ C A V + FQ + F+
Sbjct: 615 CPVFLTLYYKSLLTVIQDICLTSCMMYEQDNPAVGIVPSEWLKMHFQTMWTNFKGACFDK 674
Query: 722 GFLSAKTLTVALSEGAAIC----APSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRV 777
G ++ L + + C + G APA +AR L PK +++K+R+
Sbjct: 675 GAITGGELKIV--HQSMFCDLFDTDAAIGGMFAPARMQVR--IARAMLMVPKTIKIKNRI 730
Query: 778 LFAGASANASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLKQFHAAIFPNGKPPGS 835
+F+ ++ S+Q+ + KP + D I+ GP L H +FP S
Sbjct: 731 IFSNSTG---------AESIQAGFMKPASQRDSYIVGGPYMKFLNALHKTLFP------S 775
Query: 836 NQPNPQWFWTAL---QRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELA 892
+ + + W + +N + + E ++K S + IN ++L P+ ++ A
Sbjct: 776 TKTSALYLWHKIGQTTKNPILPGVSGEHLTELCNYVKASSQAFEEINVLDLVPDTLTSYA 835
Query: 893 MYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAV 952
+ + ILR C + ++ TL+ + ++ P+ + G GL + D
Sbjct: 836 KIKLNSSILRACGQTQFYATTLSCLSPVTQLVPAEEYP---HVLGPVGLSS-----PDEY 887
Query: 953 DAHPGAWTSMFASCNLLRPVMA---ARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMG 1008
A + L + V RP++ + L ++KY G GN VF N G
Sbjct: 888 RAKVAGRSVTIVQSTLKQAVSTNGRLRPIITVPLVVNKYTGSNGNTNVFHCANLGYFSG 946
>gi|9628008|ref|NP_042602.1| single-stranded DNA binding protein
[Equine herpesvirus 2]
gi|1360825|pir||S55600 single-stranded DNA binding protein 06 -
equine herpesvirus 2
gi|695178|gb|AAC13793.1| single-stranded DNA binding protein
Length = 1145
Score = 237 bits (604), Expect = 1e-60
Identities = 282/1193 (23%), Positives = 473/1193 (39%), Gaps = 128/1193 (10%)
Query: 16 GPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGSRTTG 75
GP G+VY + +E +LL +V PL+ GLTVE+ F NV V
Sbjct: 22 GPCGFVYLYPGDTFPVEEASLLGNLHAGGEVFSLPLLSGLTVEADFHVNVKAVHKK---- 77
Query: 76 LGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPRPG-- 133
L VS+K S Y V VF P P L LC +R+ FG++++ R G
Sbjct: 78 LDPATVSVKA--SAYHREVIVFANAACFKPIFAGPGLEGLCAASRQLFGYAEFEERAGGA 135
Query: 134 -------DLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTI 186
DL H G + + +VVTE FKE + + V +
Sbjct: 136 ARPFELADLGHLLPGA----------ESHIAGVVVTESFKERLYRGQLVVVESQIQSVRV 185
Query: 187 GGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVG 246
G + ++P+Y +LF R E Y F++ ++R LFEA
Sbjct: 186 GECDAFKVPLYDGELFAKSPCR--------------ENLRY---FYHAGVSRYLFEAHYT 228
Query: 247 PAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGA 306
A ALR R+V + A +F H+ LP F A+ G
Sbjct: 229 SLAQALRVRDVPGLIGALERQSF---HDQYKLPKVYECREFPAT------------GHRG 273
Query: 307 AGGFEQRLASVMAGDAALALE-SIVSMAVFDEPPTDISAWPLFEGQDTAAARANAVGAYL 365
AG + +A + A++ S + + WP+FEG +T R A+ +
Sbjct: 274 AGDCSLTIVDSVATELAVSYGLSFLEVPQEGTALLSYDKWPIFEGCETPEQRVEALTQFN 333
Query: 366 ARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDREG 425
A+ A V + +FS NS L+L V ++ + + FF+ G A P G
Sbjct: 334 AKQAVHVHSQLFSGNSVLYLARVQKQA-SNRGGGGENVYNSFFMGHGLACLAEPTQKENG 392
Query: 426 HVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDV 485
+P F G P + L G ++ HLA FSP +LA+ +YL+ +V
Sbjct: 393 --LPSFPGVPASALSGSN--YSLHHLAYAASFSPQMLARHCYYLQFAQHQKSSNNSGYNV 448
Query: 486 FRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSD 545
YV + T + C LC +CV+T RLR R P ++ R V + Y+D
Sbjct: 449 PTYVGTAANTPM-CELCRGSCPASCVNTLFYRLRDRFPPVVASVRRDPYVVTGVAGAYND 507
Query: 546 CDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLET 605
D+ GN+A + + + S + + TY T+ V+ L + + +
Sbjct: 508 LDIAGNFANYR--DKDEESNQSEEREKFTYWQVTQTVLERLS-----EAGICEGGEDVGD 560
Query: 606 IITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGP 665
I N + V + +VD EV + + ++V+ N +R+ + +H + + Y P
Sbjct: 561 AIHNIGSFLKVFKEIDGIVDGEVARFINSMVK-NNVNYRESIKSIHHIVQYVCNVYWQPP 619
Query: 666 CPLLQLLGRRSNLAVYQDLALSQC-----HGVFAGQSVEGRNFRNQFQPVLRRRVMDMFN 720
CP+ L R LAV QD+ L C G S G + +Q + +
Sbjct: 620 CPVFLNLYYRCVLAVVQDICLPTCMMYEQENPAVGVS-PGEWLKMHYQTLWTNFKNSCID 678
Query: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
G L+ V + +A + + ++R + P+ +++K+R++F+
Sbjct: 679 KGVLTGTEYKVVHKDQFCDFFDVDSAARGEFVSCKTQVRISRALMMAPRVMKIKNRIIFS 738
Query: 781 GASANASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLKQFHAAIFPNGKPPGSNQP 838
+ S+Q+A+ + + D ++ GP L +H+ +FP K
Sbjct: 739 NSPG---------TESIQNAFVRGTPKGDSCVVSGPYMRFLSTYHSQLFPGAK------I 783
Query: 839 NPQWFW-TALQRNQLPA-RLLSREDIETIA-FIKKFSLDYGAINFINLAPNNVSELAMYY 895
+P + W T ++ QLP + RE + +A ++++ S +G + I++ P N A
Sbjct: 784 SPLFLWHTFSKKRQLPVFPNVPRESVTELANYVEQNSRLHGETSIIDVVPENFYTYAKVR 843
Query: 896 MANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAH 955
+ N + R C + ++ T+ + + P+ + A A+G A + A +
Sbjct: 844 LNNALFRACGQTQFYATTIHCLTPKIQTVPAEEYPHALGARGVADVGEYLGAARELT--- 900
Query: 956 PGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMG---GKNA 1012
T S + + V RP+V L L ++KY G+ GN ++FQ N +G KN
Sbjct: 901 --VPTVQCTSRDNICEVGKCRPIVTLPLVVNKYTGVTGNSQIFQCANLGYFIGRGVDKNL 958
Query: 1013 CP--------LLIFDRTRKFVLACPRAGFVCAASSLGGGA--HESSLCEQLRGIISEG-G 1061
P + ++ V P + + S G + +++ I+S+G
Sbjct: 959 IPDAGSFKKQGVSTSMRKRHVFMTPLSDHLLRRSVQGAAVAFEIEGVRRRVQQILSDGDN 1018
Query: 1062 AAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAA 1121
V V + VKSLG + + D + Y+ + + L G+WS + A
Sbjct: 1019 PHVIRDVVLQLVKSLGSECRSVSEYDLEYYMGQYYIFAGDVSERLQRLSDLGGDWSEEWA 1078
Query: 1122 LEVAHEAEALVSQLGNAGEVFNFGDFGC-----EDDNATPFGGPGAPGPAFAG 1169
L V E E LG E D C +D+ A P A P ++G
Sbjct: 1079 LSVLGEEE---DPLGGELEFEKVEDAECLGHPQQDEFAL---APQAAAPQYSG 1125
>gi|20453800|gb|AAM22112.1|AF478169_3 major DNA binding protein
[porcine lymphotropic herpesvirus 1]
Length = 1126
Score = 234 bits (597), Expect = 7e-60
Identities = 277/1158 (23%), Positives = 465/1158 (39%), Gaps = 133/1158 (11%)
Query: 12 KVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGS 71
K P GP GYVY + +ALLS DS V PL+ GLTVE GF NV V
Sbjct: 18 KSPIGPCGYVYIYPKEHFCYDEVALLSDNYVDSKVFSLPLLCGLTVEDGFVTNVKAVHQK 77
Query: 72 RTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPR 131
L T VSL+LT H V+VFH P + P L ++C AR+ FG+S +T
Sbjct: 78 ----LDMTTVSLRLTSFH--RQVFVFHNADWFPPIFRGPGLDKICHDARKLFGYSAFTKN 131
Query: 132 PGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEV 191
+ LC + D ++ +V+TEGFK+ + V I EV
Sbjct: 132 E---QRNINPSDLCPPQ-IGSDSCVMAVVITEGFKQRLYFGKLVALKSHIQPVIINKTEV 187
Query: 192 HRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVA 251
RIP+Y LF+ + V FN + L+ L+ A A A
Sbjct: 188 FRIPLYDEDLFVRHDNLV---HFNCHE-----------------LSEYLYYASYTGLAQA 227
Query: 252 LRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFE 311
R +NV + +A H F ++ +DI + G
Sbjct: 228 FRIKNVSGLL-SAIHTQFTQDRYKLPKLSDIKEYSSSVING------------------- 267
Query: 312 QRLASVMAGDAALALESIVSMAVFDEPPT-----DISAWPLFEGQDTAAARANAVGAYLA 366
Q + ++ + L M + P D S W +F G +T R NA+ +
Sbjct: 268 QDVTLMIIDNVCTELALSYGMGFLEAPHEKSKLLDFSTWEIFSGCETPEDRINALTRWNI 327
Query: 367 RAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDREGH 426
+ + V +FS NS L++T+V D S F +++ G +G
Sbjct: 328 QQSVHVHVQLFSINSVLYVTKVAKQSTNTRNDQSV--FNCYYMQHGLVNLIEQTFSEKGA 385
Query: 427 VVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDVF 486
V+ F G PT+ + G HLA FS LA++ +YL+ C ++
Sbjct: 386 VL--FPGVPTSCMDGNAYTIF--HLAYAASFSKNNLARICYYLQFCQHHKSTLHPSYNIS 441
Query: 487 RYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSDC 546
+YV + ++V C C C++T RL+ R P ++++ V + + +++
Sbjct: 442 QYVGSAAVSNV-CQQCKGSYPCVCINTLFYRLKDRFPPILASSKREPYVVSGVTNTFNEL 500
Query: 547 DVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETL--QYVDQAVPTAMGRLE 604
D LGN+A F ++ + I + TY + + +LE + + ++ T +
Sbjct: 501 DFLGNFATFK--EKDEEQHQLDDIPKYTYWQLNQTITEKLEAIGIREINGNEDTTGIGIM 558
Query: 605 TIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACG 664
TI T E T+ + +VD E + + +L + N FR+ + H + +PY
Sbjct: 559 TIKTFLETFKTIDS----IVDTESVKFINSLTKN-NINFRESIKGIYHIIQFCCNPYWQS 613
Query: 665 PCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRN----FRNQFQPVLRRRVMDMFN 720
PC +L L RS + QD+AL C A G + + +Q + +
Sbjct: 614 PCSILFNLFWRSLFVILQDIALPICAMYDADNPSFGMHPSEWLKIHYQTLWTNFKSFFLD 673
Query: 721 NGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFA 780
G ++ L + S+ + A S + + R + PK L+ K+R+LF+
Sbjct: 674 KGVITGSELKIVHSDMFSDFFDIEAASNNMLCPSKVQVRLTRGHVIVPKNLKFKNRILFS 733
Query: 781 GASANASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLKQFHAAIFPNGKPPGSNQP 838
GAS + Q+A+ K + D I+ GP L FH+++FPN K
Sbjct: 734 GASMSDQ---------YQTAFLKTLSKKDTYIINGPFIKFLNAFHSSLFPNLKI------ 778
Query: 839 NPQWFWTAL-QRNQLPARLLSREDIET------IAFIKKFSLDYGAINFINLAPNNVSEL 891
+ + W+ ++ Q+P D++T AF+ S + N +L P++
Sbjct: 779 SALYLWSTFSKKRQIPVL----NDVDTDLLRNLFAFVDSNSKLFEETNLFDLIPDSFITY 834
Query: 892 AMYYMANQILRYCDHSTYFINTLTAIIA------GSRRPPSVQAAAAWSAQGGAGLEAGA 945
A + N ILR C + ++ TL AI++ G P + + G
Sbjct: 835 AKQRLNNAILRACGQTQFYAGTLHAIVSKIQIVDGEEFPHILGETPLTCVEDYLSKIKGC 894
Query: 946 RALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWAS 1005
+A+ TS+ S + + RP+V L + ++KY G+ GN ++FQ+GN
Sbjct: 895 KAMT--------VNTSLRESASA---ISRTRPIVTLPIIVNKYTGITGNAQLFQSGNVGY 943
Query: 1006 LMG---GKNACPLLIFDR-------TRKFVLACPRAG-FVCAASSLGGGAHESSLCEQLR 1054
+G KN F + ++++ P G + SS + + ++
Sbjct: 944 FLGRGVDKNLLGDTSFFKKQINSFMRKRYMFMTPIVGNLIKQNSSQSINSFDFETIKKNI 1003
Query: 1055 GIISEG--GAAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERG 1112
I EG V S+V +K G + + L ++D L Y+ + + L +
Sbjct: 1004 QSILEGQHDHKVFSNVVCELIKGFGHKCKDLTLDDLQYYLGQFYIFADNILEKISILAKI 1063
Query: 1113 NGEWSTDAALEVAHEAEA 1130
+G W+ + AL++ A
Sbjct: 1064 DGAWTVEWALDILESQSA 1081
>gi|27452772|gb|AAO12279.1| major DNA binding protein [Porcine
lymphotropic herpesvirus 2]
Length = 1142
Score = 231 bits (589), Expect = 6e-59
Identities = 268/1153 (23%), Positives = 469/1153 (40%), Gaps = 135/1153 (11%)
Query: 12 KVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGS 71
K P GP GYVY + +ALL S V PL+ GLTVE GF NV V
Sbjct: 33 KSPIGPCGYVYIYPKEHFCYDEVALLGDNYEHSKVFSLPLLCGLTVEDGFVTNVKAVHQK 92
Query: 72 RTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPR 131
L T VSL+LT H V+VFH P + P L ++C+ AR+ FG+S++T
Sbjct: 93 ----LDMTTVSLRLTSFH--RQVFVFHNADWFPPIFRGPGLDKICQDARKLFGYSEFTKN 146
Query: 132 PGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEV 191
+ LC + D ++ +V+TEGFK+ + V I EV
Sbjct: 147 E---QRNINPSDLCPPQ-MGSDSCVMAVVITEGFKQRLYFGKLVALKSHIQSVIINKTEV 202
Query: 192 HRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVA 251
RIP+Y LF+ +H ++ + F L+ L+ A A A
Sbjct: 203 FRIPLYDEDLFV-------------HHDNL-------IHFNCHELSEYLYYASYTGLAQA 242
Query: 252 LRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFE 311
R +NV + +A H F ++ +DI + G
Sbjct: 243 FRIKNVSGLL-SAIHTQFTQDRYKLPKLSDIKEYSSSVING------------------- 282
Query: 312 QRLASVMAGDAALALESIVSMAVFDEPPT-----DISAWPLFEGQDTAAARANAVGAYLA 366
Q + ++ + L M + P D S W +F +T R NA+ +
Sbjct: 283 QDVTLMIIDNVCTELALSYGMGFLEAPHEKSKLLDFSTWEIFSLCETPEDRMNALTRWNI 342
Query: 367 RAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDREGH 426
+ + V +FS NS L++T+V A ++ + + F +++ G +G
Sbjct: 343 QQSVHVHVQLFSINSVLYVTKV--AKQSNNARNDQSIFNCYYMQHGLANLLEQTFSEKGA 400
Query: 427 VVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDVF 486
V+ F G P++ + G HLA FS LA++ +YL+ C ++
Sbjct: 401 VI--FPGVPSSCMDGNAYTIF--HLAYAASFSKNNLARICYYLQFCQHHKSTLHPSYNIC 456
Query: 487 RYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSDC 546
+YV + ++V C C + C++T RL+ R P ++++ V + + +++
Sbjct: 457 QYVGSAAVSNV-CQQCKGNYPCVCINTLFYRLKDRFPPILASSKREPYVVSGVTNTFNEL 515
Query: 547 DVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETL---QYVDQAVPTAMGRL 603
D LGN+A F ++ D I + TY + + +LE + + T +G++
Sbjct: 516 DFLGNFATFK--EKDDEQHQLDDIPKYTYWQLNQTITEKLEAIGIREINGNEDITGIGKM 573
Query: 604 ETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYAC 663
+A + + +VD E + + +L + N FR+ + H + +PY
Sbjct: 574 SI-----KAFLEIFKTIDSIVDTESVKFINSLTKN-NINFRESIKGIYHIIQFCCNPYWQ 627
Query: 664 GPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRN----FRNQFQPVLRRRVMDMF 719
PC +L L RS + QD+AL C A G + + +Q +
Sbjct: 628 SPCSILFNLFWRSLFVILQDIALPICAMYDADNPSFGMHPSEWLKIHYQTLWTNFKSFFL 687
Query: 720 NNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLF 779
+ G ++ L V S+ + + A S + + R + PK L+ K+R+LF
Sbjct: 688 DKGVITGSELKVVHSDMFSDFFDTEAASNNMLCPSKVQVRLTRGHIIVPKNLKFKNRILF 747
Query: 780 AGASANASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLKQFHAAIFPNGKPPGSNQ 837
+GAS + Q+A+ K + D I+ GP L FH+++FPN K
Sbjct: 748 SGASISDQ---------YQTAFLKTLSKKDTYIINGPFIKFLNAFHSSLFPNLKI----- 793
Query: 838 PNPQWFWTAL-QRNQLPARLLSREDIET------IAFIKKFSLDYGAINFINLAPNNVSE 890
+ + W+ ++ Q+P D++T AF+ S + N +L P++
Sbjct: 794 -SALYLWSMFSKKRQIPVL----NDVDTDLLMNLFAFVDSNSKLFEETNLFDLIPDSFIT 848
Query: 891 LAMYYMANQILRYCDHSTYFINTLTAIIA------GSRRPPSVQAAAAWSAQGGAGLEAG 944
A + N ILR C + ++ TL AI++ G P + + G
Sbjct: 849 YAKQRLNNAILRACGQTQFYAGTLHAIVSKIQIVDGEEFPHILGETPLTCVEDYLSKIKG 908
Query: 945 ARALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWA 1004
+A+ TS+ S + + RP+V L + ++KY G+ GN ++FQ+GN
Sbjct: 909 CKAMT--------VNTSLRESASA---ISRTRPIVTLPIVVNKYTGITGNAQLFQSGNVG 957
Query: 1005 SLMG---GKNACPLLIFDR-------TRKFVLACPRAG-FVCAASSLGGGAHE-SSLCEQ 1052
+G KN F + ++++ P G + SS ++ ++ +
Sbjct: 958 YFLGRGVDKNLLGDTSFFKKQINSFMRKRYMFMTPIVGNLIKQNSSQSINPYDFENIKKN 1017
Query: 1053 LRGII-SEGGAAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALER 1111
++ I+ + V S+V +K G + + L ++D L Y+ E + L
Sbjct: 1018 IQSILEGQHDHKVFSNVVCELIKGFGHKCKDLTLDDLQFYLGQFYIFAENILEKISILAE 1077
Query: 1112 GNGEWSTDAALEV 1124
+G W+ + AL++
Sbjct: 1078 IDGAWTVEWALDI 1090
>gi|27452847|gb|AAO12351.1| major DNA binding protein [Porcine
lymphotropic herpesvirus 2]
Length = 1142
Score = 231 bits (588), Expect = 8e-59
Identities = 268/1153 (23%), Positives = 468/1153 (40%), Gaps = 135/1153 (11%)
Query: 12 KVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGS 71
K P GP GYVY + +ALL S V PL+ GLTVE GF NV V
Sbjct: 33 KSPIGPCGYVYIYPKEHFCYDEVALLGDNYEHSKVFSLPLLCGLTVEDGFVTNVKAVHQK 92
Query: 72 RTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPR 131
L T VSL+LT H V+VFH P + P L ++C+ AR+ FG+S++T
Sbjct: 93 ----LDMTTVSLRLTSFH--RQVFVFHNADWFPPIFRGPGLDKICQDARKLFGYSEFTKN 146
Query: 132 PGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEV 191
+ LC + D ++ +V+TEGFK+ + V I EV
Sbjct: 147 E---QRNINPSDLCPPQ-MGSDSCVMAVVITEGFKQRLYFGKLVALKSHIQSVIINKTEV 202
Query: 192 HRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVA 251
RIP+Y LF+ H ++ + F L+ L+ A A A
Sbjct: 203 FRIPLYDEDLFV-------------RHDNL-------IHFNCHELSEYLYYASYTGLAQA 242
Query: 252 LRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFE 311
R +NV + +A H F ++ +DI + G
Sbjct: 243 FRIKNVSGLL-SAIHTQFTQDRYKLPKLSDIKEYSSSVING------------------- 282
Query: 312 QRLASVMAGDAALALESIVSMAVFDEPPT-----DISAWPLFEGQDTAAARANAVGAYLA 366
Q + ++ + L M + P D S W +F +T R NA+ +
Sbjct: 283 QDVTLMIIDNVCTELALSYGMGFLEAPHEKSKLLDFSTWEIFSLCETPEDRMNALTRWNI 342
Query: 367 RAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDREGH 426
+ + V +FS NS L++T+V A ++ + + F +++ G +G
Sbjct: 343 QQSVHVHVQLFSINSVLYVTKV--AKQSNNARNDQSIFNCYYMQHGLANLLEQTFSEKGA 400
Query: 427 VVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDVF 486
V+ F G P++ + G HLA FS LA++ +YL+ C ++
Sbjct: 401 VI--FPGVPSSCMDGNAYTIF--HLAYAASFSKNNLARICYYLQFCQHHKSTLHPSYNIS 456
Query: 487 RYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSDC 546
+YV + ++V C C + C++T RL+ R P ++++ V + + +++
Sbjct: 457 QYVGSAAVSNV-CQQCKGNYPCVCINTLFYRLKDRFPPILASSKREPYVVSGVTNTFNEL 515
Query: 547 DVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETL---QYVDQAVPTAMGRL 603
D LGN+A F ++ D I + TY + + +LE + + T +G++
Sbjct: 516 DFLGNFATFK--EKDDEQHQLDDIPKYTYWQLNQTITEKLEAIGIREINGNEDITGIGKM 573
Query: 604 ETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYAC 663
+A + + +VD E + + +L + N FR+ + H + +PY
Sbjct: 574 SI-----KAFLEIFKTIDSIVDTESVKFINSLTKN-NINFRESIKGIYHIIQFCCNPYWQ 627
Query: 664 GPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRN----FRNQFQPVLRRRVMDMF 719
PC +L L RS + QD+AL C A G + + +Q +
Sbjct: 628 SPCSILFNLFWRSLFVILQDIALPICAMYDADNPSFGMHPSEWLKIHYQTLWTNFKSFFL 687
Query: 720 NNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLF 779
+ G ++ L V S+ + + A S + + R + PK L+ K+R+LF
Sbjct: 688 DKGVITGSELKVVHSDMFSDFFDTEAASNNMLCPSKVQVRLTRGHIIVPKNLKFKNRILF 747
Query: 780 AGASANASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLKQFHAAIFPNGKPPGSNQ 837
+GAS + Q+A+ K + D I+ GP L FH+++FPN K
Sbjct: 748 SGASISDQ---------YQTAFLKTLSKKDTYIINGPFIKFLNAFHSSLFPNLKI----- 793
Query: 838 PNPQWFWTAL-QRNQLPARLLSREDIET------IAFIKKFSLDYGAINFINLAPNNVSE 890
+ + W+ ++ Q+P D++T AF+ S + N +L P++
Sbjct: 794 -SALYLWSMFSKKRQIPVL----NDVDTDLLMNLFAFVDSNSKLFEETNLFDLIPDSFIT 848
Query: 891 LAMYYMANQILRYCDHSTYFINTLTAIIA------GSRRPPSVQAAAAWSAQGGAGLEAG 944
A + N ILR C + ++ TL AI++ G P + + G
Sbjct: 849 YAKQRLNNAILRACGQTQFYAGTLHAIVSKIQIVDGEEFPHILGETPLTCVEDYLSKIKG 908
Query: 945 ARALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWA 1004
+A+ TS+ S + + RP+V L + ++KY G+ GN ++FQ+GN
Sbjct: 909 CKAMT--------VNTSLRESASA---ISRTRPIVTLPIVVNKYTGITGNAQLFQSGNVG 957
Query: 1005 SLMG---GKNACPLLIFDR-------TRKFVLACPRAG-FVCAASSLGGGAHE-SSLCEQ 1052
+G KN F + ++++ P G + SS ++ ++ +
Sbjct: 958 YFLGRGVDKNLLGDTSFFKKQINSFMRKRYMFMTPIVGNLIKQNSSQSINPYDFENIKKN 1017
Query: 1053 LRGII-SEGGAAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALER 1111
++ I+ + V S+V +K G + + L ++D L Y+ E + L
Sbjct: 1018 IQSILEGQHDHKVFSNVVCELIKGFGHKCKDLTLDDLQFYLGQFYIFAENILEKISILAE 1077
Query: 1112 GNGEWSTDAALEV 1124
+G W+ + AL++
Sbjct: 1078 IDGAWTVEWALDI 1090
>gi|27452807|gb|AAO12312.1| major DNA binding protein [Porcine
lymphotropic herpesvirus 3]
Length = 1125
Score = 227 bits (578), Expect = 1e-57
Identities = 283/1173 (24%), Positives = 474/1173 (40%), Gaps = 123/1173 (10%)
Query: 12 KVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGS 71
K P GP GYVY +ALL + DS V PL+ GLTVE GF N+ V
Sbjct: 18 KSPLGPCGYVYIYPKDHFSYSEVALLGDKYDDSGVFSLPLLCGLTVEEGFITNIKAVHQK 77
Query: 72 RTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPR 131
L VS++LT H V+VFHG P + P L +C AR+ FG+S++T
Sbjct: 78 ----LDIATVSVRLTSFH--RQVFVFHGANFFPPIFRGPGLDSICNDARKIFGYSEFTKN 131
Query: 132 PGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEV 191
K+ + LC L D ++ +V+TEGFK+ + V + E
Sbjct: 132 --QYKNVDPSD-LCPS-HLSTDSCIMAVVITEGFKQRLYFGRLVALTSHIQSVIVNKTEA 187
Query: 192 HRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVA 251
RIP+Y LF H ++ L F L+ L+ A A
Sbjct: 188 FRIPLYDEDLF-------------GRHENL-------LRFNCHELSEYLYYTFYTGLAQA 227
Query: 252 LRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFE 311
R +NV + A H F ++ +DI + G+ +
Sbjct: 228 FRIKNVSGLLDAI-HTQFTQDKYKLPKLSDIKEYSSSTINGQ-----------------D 269
Query: 312 QRLASVMAGDAALALESIVSMAVFDEPP------TDISAWPLFEGQDTAAARANAVGAYL 365
L V A LAL +S F E P D S W +F +T R A+ +
Sbjct: 270 TTLMIVDNVCAELALSYGMS---FLEAPHEKSKILDFSTWEIFSSCETQEDRVEAITRWN 326
Query: 366 ARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDREG 425
A+ + V + +FS NS L+LT+V G D + F ++L G +G
Sbjct: 327 AQQSLHVHSQLFSVNSVLYLTKVAKHGTNARNDQNV--FNSYYLQHGLMSLNEQTFSEKG 384
Query: 426 HVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDV 485
++ F G P + L G + HLA FS LA++ +YL+ C +
Sbjct: 385 TLI--FSGVPGSSLDGNA--YTLYHLAYSASFSKNNLARICYYLQFCQHHKSTLHPSYSI 440
Query: 486 FRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSD 545
+YV ++V C LC C++T RL+ R P + ++ V + + +++
Sbjct: 441 SQYVGSVAGSNV-CQLCHGTCPCTCLNTLFYRLKDRFPPILNGSKRDPYVVTGVTNTFNE 499
Query: 546 CDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLET 605
D LGN+A F ++ D + TY + ++ +LE + + G +T
Sbjct: 500 LDFLGNFATFK--EKDDEQHPTDDAPKYTYWQLNQTILEKLEGM-----GIREVNGNEDT 552
Query: 606 IITNREALHT---VVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYA 662
+ T + N+ VD E + + +L + N FR+ + H + +PY
Sbjct: 553 SGIGEITMKTFLEIFKNIDNAVDVESVKFINSLTKN-NINFRESIKGIYHIIQFCCNPYW 611
Query: 663 CGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRN----FRNQFQPVLRRRVMDM 718
PC + L RS V QD+AL C A G + +Q +
Sbjct: 612 QSPCSIFLNLFYRSLFMVLQDIALPICAMYDADNPSFGLPPSEWLKMHYQTIWTNFKSFF 671
Query: 719 FNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVL 778
+ G ++ L + S+ + A S + + R + PK L+ K+R+L
Sbjct: 672 MDKGVVTGTELKIVHSDMFNDFFDTEAASNNIYCPSKVQVRLTRGHVIVPKNLKFKNRIL 731
Query: 779 FAGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQP 838
F+GA N S+ + ++A L+S ++ + V+ GP L FH+++FPN K
Sbjct: 732 FSGA--NTSD--QYQMAFLKSVSKRENYIVN---GPFIKFLNAFHSSLFPNLKI------ 778
Query: 839 NPQWFWTAL-QRNQLPARLLSREDI--ETIAFIKKFSLDYGAINFINLAPNNVSELAMYY 895
+ + W+ ++ Q+P D+ ++++ S + N + P++ A
Sbjct: 779 SALYLWSNFSKKRQIPMITDVDSDLVRNLFSYVETNSKLFEEFNLFDFIPDSFITYAKQR 838
Query: 896 MANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAH 955
+ N ILR C + ++ TL AI++ R SV++ G + A L A
Sbjct: 839 LNNAILRACGQTQFYAGTLHAIVS---RLQSVESEEFPHVLGAVPITCTADYL-----AK 890
Query: 956 PGAWTSMFASCNLLRP---VMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMG---G 1009
+ ++ + +L + RP+V + + ++KY G+ GN ++FQ+GN MG
Sbjct: 891 VRGFKALIINTSLRESASVISRTRPIVTVPIVVNKYTGITGNAQLFQSGNVGYFMGRGVD 950
Query: 1010 KNACPLLIFDR-------TRKFVLACPRAG-FVCAASSLGGGAHESSLCEQLRGIISEG- 1060
KN F + ++++ P G + SS E ++ I EG
Sbjct: 951 KNLLGDASFFKKQTNSFMRKRYMFMTPIVGSLIKQTSSQSITPFEFEAIKKNIQTILEGQ 1010
Query: 1061 -GAAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTD 1119
V ++V +K LG R + L ++D L ++ + + L + +G W+ +
Sbjct: 1011 HDHNVFTNVVCELIKVLGRRCKDLTLDDLQFYLGQFFIFADNILEKIDVLAQIDGAWTIE 1070
Query: 1120 AALEVAHEAEALVSQLGNAGEVFNFGDFGCEDD 1152
AL+V E E++ NA + F + C D
Sbjct: 1071 WALDVL-ETESVGD---NAVQFIEFNEPPCTPD 1099
>gi|10140932|ref|NP_065509.1| major ss DNA binding protein
[Alcelaphine herpesvirus 1]
gi|7444335|pir||T03105 major single-stranded DNA binding protein -
alcelaphine herpesvirus 1
gi|2337973|gb|AAC58057.1| major ss DNA binding protein [Alcelaphine
herpesvirus 1]
Length = 1127
Score = 226 bits (577), Expect = 2e-57
Identities = 267/1114 (23%), Positives = 461/1114 (40%), Gaps = 128/1114 (11%)
Query: 12 KVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGS 71
K P GP G++Y + ++LL + ++ PL+ G+TVE F NV V
Sbjct: 18 KAPIGPCGFIYIYPETHFNFKEISLLGDKYAEAGAFSLPLLHGVTVEEAFVPNVKAVYKK 77
Query: 72 RTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPR 131
+ T VS+KL S + + +FH + P L LC+ A FG+ +TP
Sbjct: 78 ----IDMTTVSVKL--STFYNRAIIFHNVEKFESIFSGPGLGSLCKEACDLFGYVPFTPL 131
Query: 132 PGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEV 191
+ T +C + + D A++ +V+TEGFKE + + V I EV
Sbjct: 132 G---EGSTDVSDICPPVWQEKD-AIMAVVITEGFKERLHLGKLIYLKSQMHSVMINKTEV 187
Query: 192 HRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVA 251
+RIP+Y LF +S + P ++ L+ + A +
Sbjct: 188 YRIPLYDEDLF--------------TKKSSLRRLYLPA------VSEYLYYTLYTSLAQS 227
Query: 252 LRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFE 311
LR N ++ A + ++ A L ++F + + G +
Sbjct: 228 LRVHNAASLVEAIQEQFVHDKYKMAKL---VSFKEYPLA---------------TVGACD 269
Query: 312 QRLASVMAGDAALALESIVSMAVFDEPPT-----DISAWPLFEGQDTAAARANAVGAYLA 366
L + A A L L S++ F+ P D +W +F +T + R A+ + A
Sbjct: 270 TTLMVIDAVAAELGLS--YSLSFFEAPQEKTKVQDYYSWDIFASCETDSDRLEALSKWNA 327
Query: 367 RAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYR-FFLVPGTHVAANPQVDREG 425
A + A +FSTNS ++ V P P +P+ Y ++L G + +G
Sbjct: 328 LQAIHIHAQLFSTNSIYYVNRVARQAPI-PNSKVEPNVYNSYYLQHGLANLCEETLFEDG 386
Query: 426 HVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDV 485
P F G P + L G + F +HLA FSP LLA+M +YL+ C ++
Sbjct: 387 S--PAFTGAPASSLDGSS--FTLQHLAYAAAFSPNLLARMCYYLQFCQHQKSTLNPAYNI 442
Query: 486 FRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSD 545
YV + + V C+LC+ C++T RL+ R P +R V + +++++
Sbjct: 443 TEYVGSAANSPV-CSLCSGQCPCVCINTLFYRLKDRFPPVLQGSRRDPYVITGITNVFNE 501
Query: 546 CDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLET 605
D LGN+A+F K D ++T T + TY + + +LE VD V G +
Sbjct: 502 LDFLGNFASFRD-KDEDQNQTEET-PRYTYWQLNQTLTEKLEAAGLVDSPVADE-GAGGS 558
Query: 606 IITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGP 665
N E +++ +VD E + + +++ N F++ + +H + + Y P
Sbjct: 559 GSMNLEKFVRTFSDIDSLVDAEAAKFINTMIK-NNVNFKESIKGVSHVIQYNCNTYWQAP 617
Query: 666 CPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRN----FRNQFQPVLRRRVMDMFNN 721
C L+ L RS L + QD+AL + +G + +Q + +
Sbjct: 618 CSLMLNLYYRSILTIIQDIALPISTVYESENPAQGYKPNEWLKLHYQTLWTNFKSFFIDK 677
Query: 722 GFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFAG 781
G ++ + V +E + A + + +AR + K ++VK+R+LF+G
Sbjct: 678 GVITGTEMKVVHAEQFSDFFDVDAATNNMYSPVKVQVRLARAQVLALKNIKVKNRILFSG 737
Query: 782 ASANASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLKQFHAAIFPNGKPPGSNQPN 839
S + Q+A+ K R D IL GP L FH +FPN K +
Sbjct: 738 TSMS---------EHYQNAFLKTANRRDNYILAGPYVKFLNSFHRQLFPNLK------IS 782
Query: 840 PQWFWTAL-QRNQLP-ARLLSREDI-ETIAFIKKFSLDYGAINFINLAPNNVSELAMYYM 896
+ W+ ++ Q+P +S E + + ++I S + +N +++ P++ A +
Sbjct: 783 CLYLWSNFCKKKQIPCVPGVSAEALNKFFSYINNNSKQFEEVNMLDVVPDSYVTYAKQRL 842
Query: 897 ANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHP 956
N ILR C + ++ T+ +I P VQ A G + +D+V+ +
Sbjct: 843 NNAILRACGQTQFYAVTIHSIF------PKVQETCALEYPHVLGTSS-----VDSVEDYV 891
Query: 957 GAWTSMFA----------SCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASL 1006
++ A + NL R +RP+V L + ++KY G+AGN ++FQ+ N
Sbjct: 892 NNVQNLKALTVNSSLRESAANLAR----SRPIVTLPVVVNKYTGIAGNAQLFQSANLGYF 947
Query: 1007 MG---GKNACPLLIFDR-------TRKFVLACPRAGFVCAAS-SLGGGAHESSLCEQLRG 1055
MG KN +F + +K++ P G + S + G A E ++
Sbjct: 948 MGRGVDKNLLGDSLFVKKQQNSYMRKKYLFMTPLVGNLLKPSYTHQGTAFEIETVKRTIQ 1007
Query: 1056 IISEGGA--AVASSVFVATVKSLGPRTQQLQIED 1087
I E A V + V VKSLG L ++D
Sbjct: 1008 SILEDQADEDVLNRVVCELVKSLGAGCADLTLDD 1041
>gi|27452792|gb|AAO12298.1| major DNA binding protein [Porcine
lymphotropic herpesvirus 3]
Length = 1125
Score = 226 bits (577), Expect = 2e-57
Identities = 284/1171 (24%), Positives = 473/1171 (40%), Gaps = 119/1171 (10%)
Query: 12 KVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGS 71
K P GP GYVY +ALL + DS V PL+ GLTVE GF N+ V
Sbjct: 18 KSPLGPCGYVYIYPKDHFSYSEVALLGDKYDDSGVFSLPLLCGLTVEEGFITNIKAVHQK 77
Query: 72 RTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPR 131
L VS++LT H V+VFHG P + P L +C AR+ FG+S++T
Sbjct: 78 ----LDIATVSVRLTSFH--RQVFVFHGANFFPPIFRGPGLDSICNDARKIFGYSEFTKN 131
Query: 132 PGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEV 191
K+ + LC L D ++ +V+TEGFK+ + V + E
Sbjct: 132 --QYKNVDPSD-LCPS-HLSTDSCIMAVVITEGFKQRLYFGRLVALTSHIQSVIVNKTEA 187
Query: 192 HRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVA 251
RIP+Y LF H ++ L F L+ L+ A A
Sbjct: 188 FRIPLYDEDLF-------------GRHENL-------LRFNCHELSEYLYYTFYTGLAQA 227
Query: 252 LRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFE 311
R +NV + A H F ++ +DI + G+ +
Sbjct: 228 FRIKNVSGLLDAI-HTQFTQDKYKLPKLSDIKEYSSSTINGQ-----------------D 269
Query: 312 QRLASVMAGDAALALESIVSMAVFDEPP------TDISAWPLFEGQDTAAARANAVGAYL 365
L V A LAL +S F E P D S W +F +T R A+ +
Sbjct: 270 TTLMIVDNVCAELALSYGMS---FLEAPHEKSKILDFSTWEIFSSCETQEDRVEAITRWN 326
Query: 366 ARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDREG 425
A+ + V + +FS NS L+LT+V G D + F ++L G +G
Sbjct: 327 AQQSLHVHSQLFSVNSVLYLTKVAKHGTNARNDQNV--FNSYYLQHGLMSLNEQTFSEKG 384
Query: 426 HVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDV 485
++ F G P + L G + HLA FS LA++ +YL+ C +
Sbjct: 385 TLI--FSGVPGSSLDGNA--YTLYHLAYSASFSKNNLARICYYLQFCQHHKSTLHPSYSI 440
Query: 486 FRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSD 545
+YV ++V C LC C++T RL+ R P + ++ V + + +++
Sbjct: 441 SQYVGSVAGSNV-CQLCHGTCPCTCLNTLFYRLKDRFPPILNGSKRDPYVVTGVTNTFNE 499
Query: 546 CDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLET 605
D LGN+A F ++ D + TY + ++ +LE + + G +T
Sbjct: 500 LDFLGNFATFK--EKDDEQHPTDDAPKYTYWQLNQTILEKLEGM-----GIREVNGNEDT 552
Query: 606 IITNREALHT---VVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYA 662
+ T + N+ VD E + + +L + N FR+ + H + +PY
Sbjct: 553 SGIGEITMKTFLEIFKNIDNAVDVESVKFINSLTKN-NINFRESIKGIYHIIQFCCNPYW 611
Query: 663 CGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRN----FRNQFQPVLRRRVMDM 718
PC + L RS V QD+AL C A G + +Q +
Sbjct: 612 QSPCSIFLNLFYRSLFTVLQDIALPICAMYDADNPSFGLPPSEWLKMHYQTIWTNFKSFF 671
Query: 719 FNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVL 778
+ G ++ L + S+ + A S + + R + PK L+ K+R+L
Sbjct: 672 MDKGVVTGTELKIVHSDMFNDFFDTEAASNNIYCPSKVQVRLTRGHVIVPKNLKFKNRIL 731
Query: 779 FAGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQP 838
F+GA N S+ + ++A L+S ++ + V+ GP L FH+++FPN K
Sbjct: 732 FSGA--NTSD--QYQMAFLKSVSKRENYIVN---GPFIKFLNAFHSSLFPNLKI------ 778
Query: 839 NPQWFWTAL-QRNQLPARLLSREDI--ETIAFIKKFSLDYGAINFINLAPNNVSELAMYY 895
+ + W+ ++ Q+P D+ ++++ S + N + P++ A
Sbjct: 779 SALYLWSNFSKKRQIPMITDVDSDLVRNLFSYVETNSKLFEEFNLFDFIPDSFITYAKQR 838
Query: 896 MANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAH 955
+ N ILR C + ++ TL AI++ R SV++ G + A L
Sbjct: 839 LNNAILRACGQTQFYAGTLHAIVS---RLQSVESEEFPHVLGAVPITCTADYLAKVRGCK 895
Query: 956 PGAW-TSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMG---GKN 1011
TS+ S ++ + RP+V + + ++KY G+ GN ++FQ+GN MG KN
Sbjct: 896 ALIINTSLRESASV---ISRTRPIVTVPIVVNKYTGITGNAQLFQSGNVGYFMGRGVDKN 952
Query: 1012 ACPLLIFDR-------TRKFVLACPRAG-FVCAASSLGGGAHESSLCEQLRGIISEG--G 1061
F + ++++ P G + SS E ++ I EG
Sbjct: 953 LLGDASFFKKQTNSFMRKRYMFMTPIVGSLIKQTSSQSITPFEFEAIKKNIQTILEGQHD 1012
Query: 1062 AAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAA 1121
V ++V +K LG R + L ++D L ++ + + L + +G W+ + A
Sbjct: 1013 HNVFTNVVCELIKVLGRRCKDLTLDDLQFYLGQFFIFADNILEKIDVLAQIDGAWTIEWA 1072
Query: 1122 LEVAHEAEALVSQLGNAGEVFNFGDFGCEDD 1152
L+V E E++ NA + F + C D
Sbjct: 1073 LDVL-ETESVGD---NAVQFIEFNEPPCTPD 1099
>gi|18025535|gb|AAK95479.1| BALF2 [cercopithicine herpesvirus 15]
Length = 1133
Score = 219 bits (558), Expect = 2e-55
Identities = 280/1154 (24%), Positives = 446/1154 (38%), Gaps = 146/1154 (12%)
Query: 15 PGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGSRTT 74
PGP GY+Y + + +A L PL+ G+TVE GF NV +
Sbjct: 17 PGPCGYIYFYPLATYPLREVATLGTGYTGHRCLTVPLLCGITVEPGFSINVKALHRRPDP 76
Query: 75 GLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPRPGD 134
G L + Y VYVFH + + P + P L LCE R FG+ Y+
Sbjct: 77 NCG------LLRATSYHRDVYVFHNAQMVPPIFEGPGLEALCEETREVFGYDGYSA---- 126
Query: 135 LKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEVHRI 194
L +++ GLDP L +VVTE FKE + N +VT+G + R+
Sbjct: 127 LSRDSSKPEDFFPDGLDPSAYLGAVVVTEAFKERLYGGNLVAIPSLKQEVTVGPSASFRV 186
Query: 195 PVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVALRC 254
P+Y ++F E F+N L+ + E + A ALR
Sbjct: 187 PLYDKEVFP-------------------EGVPQQRQFYNSDLSSCMHETLYTGLAQALRV 227
Query: 255 RNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFEQRL 314
R V + + + + A + A F AS P G
Sbjct: 228 RQVGKLVELLEKQSLQDQAKVAKVAA---LKEFPASTISHPDSG---------------- 268
Query: 315 ASVMAGDAALALESIVSMA-----VFDEPPTDIS--AWPLFEGQDTAAARANAVGAYLAR 367
+VM D+A A E VS A E P ++ +WPLF + AR A+ Y A
Sbjct: 269 -AVMIVDSA-ACELAVSYAPAMLEAAHETPASLNYDSWPLFADCEGPEARVAALHRYNAS 326
Query: 368 AA------GLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQV 421
A + ++ ST S + T G A SFY T Q
Sbjct: 327 LAPHGIHADICHQLLSSTFSGVSKTTGAGQGEAP-----LTSFYM------TQGLGTLQE 375
Query: 422 DREGHVVPGFEGRPTA-PLVG----GTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAV 476
+ G + PG R P V G ++ SP LA+ +YL+ C G
Sbjct: 376 GKVGPLAPGPASRAWGGPDVDWHQRGPATTRWSTWSLRPPSSPNFLARYAYYLQFCQGQK 435
Query: 477 IVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVF 536
+ YVA + T C+LC C++T RLR R P S+ R V
Sbjct: 436 SSLTPVPETGSYVAGA-ATSPMCSLCEGRAPAVCLNTLFFRLRDRFPPVMSSQRRDPYVI 494
Query: 537 GTMNSMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAV 596
+ Y++ D LGN+ F + + D ++ + TY + ++ L L
Sbjct: 495 SGASGSYNETDFLGNFLNF--IDKEDDAQRPDDEPRYTYWQLNQNLLERLSRLGI----- 547
Query: 597 PTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSL 656
A G+LE + +V VD EV Q M ++ + N ++D + H +
Sbjct: 548 -DADGKLEKEPQGPRDFIKMFRDVDAAVDAEVVQFMNSMAKN-NITYKDQVKSCYHVLQY 605
Query: 657 TLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRN----FRNQFQPVLR 712
+ +P+A CP+ L RS L + QD++L C G++ + +Q +
Sbjct: 606 SCNPFAQPACPVFTQLFYRSLLTILQDISLPICMCYENDNPGLGQSPPEWLKGHYQTLCT 665
Query: 713 RRVMDMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELR 772
+ G L+AK V +E A Q +++V + P+ ++
Sbjct: 666 NFRSLAIDKGVLTAKEAKVVHAEPTCDLPDLDAALQGRTYGRRLPVRMSKVLMLCPRNIK 725
Query: 773 VKSRVLFAGASANASEAAKARVASLQSAYQKPDKRVD--ILLGPLGFLLKQFHAAIFPNG 830
+K+RV+F G +A +LQ+++ K R + I+ GP L +H +FP+
Sbjct: 726 IKNRVVFTGENA-----------ALQNSFIKSTARRENYIINGPYMKFLNTYHKTLFPDT 774
Query: 831 KPPGSNQPNPQWFWTALQRNQ---LPARLLSREDIETIAFIKKFSLDYGAINFINLAPNN 887
K + + W R + +P+ + E + F+ S + N I++ P N
Sbjct: 775 KL------SSLYLWHNFSRRRSVPVPSGASAEEYSDLALFVDGGSRAHEESNVIDVVPGN 828
Query: 888 VSELAMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEA--GA 945
+ A + N IL+ C + ++I+ + ++ P QA A G A A
Sbjct: 829 LVTYAKQRLNNAILKACGQTQFYISLVQGLV------PKTQAVPARDYPHVLGTRAVESA 882
Query: 946 RALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWAS 1005
A +A + A T + A+ + L V ARP++ L ++I+KY G+ GN+++FQAGN
Sbjct: 883 AAYAEATSSLT-ATTVVCAATDCLSQVCKARPVITLPVTINKYTGVNGNNQIFQAGNLGY 941
Query: 1006 LMGGKNACPLLI------------FDRTRKFVLACPRAGFVCAASSLGGGAHESSLCEQL 1053
MG LL +KFV A P G + +E E +
Sbjct: 942 FMGRGVDRNLLQAPGAGLRKQAGGSSMRKKFVFATPTLGLTIKRRTQAAATYE---IENI 998
Query: 1054 RG-----IISEGGAAVASSVFVATVKSLGPRTQQLQIEDWLALL-EDEYLSEEMMELTAR 1107
R I+ + V V ++G L ++D LL L++ ++E A
Sbjct: 999 RAGLEAIILQKQEEDCVLDVVCKLVDAMGEACASLTLDDAEYLLGRFSVLADSVLETLAT 1058
Query: 1108 ALERGNGEWSTDAA 1121
G EW+ +AA
Sbjct: 1059 IASSGI-EWTAEAA 1071
>gi|330750|gb|AAA46051.1| DNA-binding protein
Length = 129
Score = 144 bits (363), Expect = 1e-32
Identities = 83/137 (60%), Positives = 93/137 (67%), Gaps = 10/137 (7%)
Query: 1062 AAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAA 1121
A VAS VF A KSLG R QQLQIEDWLALLEDEYLSEEMMEL RALERG GEWS DAA
Sbjct: 1 ATVASDVFAAAAKSLGARVQQLQIEDWLALLEDEYLSEEMMELAGRALERGGGEWSLDAA 60
Query: 1122 LEVAHEAEALVSQLGNAGEVFNFGDFGCEDDNATPFGGPGAPGPA--FAGRKRAFHGDDP 1179
L+VA EAEA+V++ +A E F+FG F ED GP G A R+R D
Sbjct: 61 LDVAREAEAMVTRHVDAEETFDFGAF-AED-------GPADAGLAVHLQSRRRPLACSDL 112
Query: 1180 FGEGPPDKKGDLTLDML 1196
FG+ P +K+ DLTLDML
Sbjct: 113 FGDAPAEKRNDLTLDML 129
>gi|14251049|ref|NP_116411.1| T57 [Tupaia herpesvirus]
gi|9296959|sp|Q9WRL7|DNBI_HSVT2 Major DNA-binding protein
gi|5381306|gb|AAD42933.1|AF084543_1 major DNA binding protein [Tupaia
herpesvirus]
gi|14210743|gb|AAK57106.1| T57 [Tupaia herpesvirus]
Length = 1193
Score = 143 bits (361), Expect = 2e-32
Identities = 242/1036 (23%), Positives = 384/1036 (36%), Gaps = 104/1036 (10%)
Query: 14 PPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGSRT 73
P GP +++ E ++LA LS S VA+APL+V LTV+ F+ V + SR
Sbjct: 10 PLGPAAWLFVCPRQDEWCDVLAALSLCDRSSSVAIAPLLVDLTVDRDFQVAVRTPI-SRY 68
Query: 74 TGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQ-APNLTRLCERARRHFGFSDYTPRP 132
G V K+T + +VFH + T+ ++ LC AR FG + Y R
Sbjct: 69 EG----GVLTKVTSMW--PAAFVFHNAEAIVSRTEDHGDVGGLCAEARARFGVASY--RA 120
Query: 133 GDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEVH 192
+ +T L LG+D R ++Y VV G KE + + + V +G E
Sbjct: 121 EAERADTDFTELWAALGVDGARVVMYAVVGYGLKELLYAGQLVPCVEEARTVLLGAVEAF 180
Query: 193 RIPVYPLQLFMP-DFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVA 251
++P+YP LF D + A R+ F + L+ LF V A
Sbjct: 181 KLPLYPATLFADGDATADGAAAVGLRSRT---PFVDRRGLYVSALSEALFYYVFTALGQA 237
Query: 252 LRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFE 311
LR + + + + L + + SQ TP G RD +
Sbjct: 238 LRFGHTEHLIDEGMKQFLQDTQNSVKLAPQKRYYGY-LSQKLTP-GERD----------Q 285
Query: 312 QRLASVMAGDAALALESIVSMAVFDEPP-TDISAWPLFEGQDTAAARANAVGAYLARAAG 370
L +A + A + S+ + ++ P + S WPL + A + +
Sbjct: 286 LLLCDAIACELAFSFASVYFDSAYEPAPLMNYSEWPLVRAAEGHADLLRRLSELKLHLSA 345
Query: 371 LVGAMVFSTNSALHLTEVD--------DAGPADPKDHSKPSFYRFFLVPGTHVAANPQVD 422
VGA+VFS NS L+ T + AG K + L T A N
Sbjct: 346 HVGALVFSGNSVLYQTRIAFFSAANKVPAGGTAQDGLLKAVQFCNGLTCLTEDALNDACR 405
Query: 423 REGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQE 482
PG G G ++F +HLA C SP L++ +++YL R A+ Q
Sbjct: 406 TVKFEGPGGGGG------GRDEQFTPQHLAWACATSPHLMSDLVWYLNRL--AIYNTGQN 457
Query: 483 MDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSM 542
Y + C C +C T +R++ R P + V +
Sbjct: 458 GGSALYEHLVHCAVNLCPACRGRCCQSCYQTAFVRIQTRLPPLPKQLKREPFVLTLFSRF 517
Query: 543 YSDCDVLGNYAAF--------SALKRADGSETARTIMQETYRAA-----TERVMAELETL 589
D DVLG + SA A AR + E A R+ ++ L
Sbjct: 518 LCDVDVLGTFGKRYAGDAKEPSAASLAAAPGEARKVGDEAGLGAGGGGPGGRLGVNVDRL 577
Query: 590 QYVDQ---------AVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRN 640
+Y +Q + + G + R + ++ + + VD E M + E R
Sbjct: 578 KYFNQILDYCKRNSLIDPSTGEDTLAVRGRADFMSALSGLNRCVD---EAAMALVSEVRM 634
Query: 641 FKFRDGLGEANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQ---- 696
RD + A A +L L+PYA PLL R+ + Q+LAL
Sbjct: 635 KSNRDEVAGATQAFNLDLNPYAVAFSPLLAHQYYRAFFLIVQNLALVSASSYVVDNPLTV 694
Query: 697 SVEGRNFRNQFQPVLRRRVMDMFNNGFLSAKTLTVALS-EGAAICAPSLTAGQTAPAESS 755
S R FQ + + G L K + S E +L A S
Sbjct: 695 SSLSRWLLQHFQSICGAFASNSARKGLLFTKDAKCSKSVEFERFMDFALYAASGRHVLLS 754
Query: 756 FEGDVARVTLGFPKELRVKSRVLFAGASANASEAAKARVASLQSAYQKPD--KRVDILLG 813
E + ++++ + RVK+R + G S + K D +R + + G
Sbjct: 755 TETKLCKLSVCMLRTCRVKNRPIPRGGKGLP-----------VSVFFKRDVVQRRNPVRG 803
Query: 814 PLGFLLKQFHAAIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIK---K 870
L FLL FH +FP + FW + N LP + + E AF+K
Sbjct: 804 CLAFLLYAFHERLFPGCGLSCLD------FWQKVYHNALPKSVAIGKMEEFNAFVKYVLN 857
Query: 871 FSLDYGAINFINLAPNNVSELAMYYMANQILRYCDHSTYFINTL----TAIIAGSR-RPP 925
+ +Y + I++ P+N+ Y N+ L + Y ++TL T ++ + P
Sbjct: 858 VTTEYNEHDLIDVPPSNLLSYVEYRFHNKFLCFYGFGDY-LSTLHGLSTKLVPQNHLNFP 916
Query: 926 SVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSI 985
+ AA+ A + + +D V P + F+ +L+R V R +V + I
Sbjct: 917 HLLAASPKFASVAEYVLYFKKLKLDGV---PPPHVATFSRESLVRSVFENRSLVTVAFGI 973
Query: 986 SKYYGMAGNDRVFQAG 1001
KY G+ VF G
Sbjct: 974 EKYSTSGGSREVFHFG 989
>gi|232005|sp|P13215|DNBI_SCMVC Major DNA-binding protein (MDBP)
gi|93147|pir||A36256 DNA-binding protein - human cytomegalovirus
(strain Colburn)
gi|221811|dbj|BAA00647.1| single-stranded DNA-binding protein [Simian
cytomegalovirus]
Length = 1160
Score = 141 bits (355), Expect = 8e-32
Identities = 216/1009 (21%), Positives = 376/1009 (36%), Gaps = 70/1009 (6%)
Query: 14 PPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGSRT 73
P GP YVY E E+LA LS S V +APL++GLTV+ F +V V
Sbjct: 11 PVGPAAYVYFTKTNHEMNEVLATLSLCDSSSPVVIAPLLMGLTVDQDFCTSVRTPVVCYD 70
Query: 74 TGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPRPG 133
G+ L S ++Y ++ +D S ++ RLC+ R+ + Y P G
Sbjct: 71 GGV------LTKVTSFCPFALYFYNTQGIVDFSEPHGDVQRLCDETRQRYAIESYMPEEG 124
Query: 134 DLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEVHR 193
+ T ALC G DP L+++VV G KE + + + + R
Sbjct: 125 --RAPTDLAALCTAAGCDPQEVLVHVVVGNGMKEFMYAGQLIPCFEEAAPTRLNDCDAVR 182
Query: 194 IPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVALR 253
+P+YP LF + V ++ + + RS F + ++ LF V ALR
Sbjct: 183 VPLYPPTLFGSLQADVDSDELSLDKRS---SFVESRGLYVPAVSETLFYYVYTSWCQALR 239
Query: 254 CRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFEQR 313
+ AA +++ + L + + + + +
Sbjct: 240 FSETKVLIEAALKQFVNDSQQSVKLAPHKKYFGYTSQKLSSLEKDHLMLSDAVICELGFS 299
Query: 314 LASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANAVGAYLARAAGLVG 373
ASV A A +S+V S WP+ A+ + +
Sbjct: 300 FASVFLDSAYGASDSMV-----------YSEWPVVVNATDHRDLIRALTELKLHLSTHIS 348
Query: 374 AMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDREGHVVPGFEG 433
A++FS NS L+ + K+ S + L+ H A E +
Sbjct: 349 ALLFSCNSILYHNRL--VYLTSNKNASGTGASQEVLLKSIHFANGLTGLCEDTYNDARKL 406
Query: 434 RPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCD--GAVIVGRQEMDVFRYVAD 491
+ +V + +A HL+++CG P L + ++YL R + G +
Sbjct: 407 IKCSGVVAKDERYAPYHLSLICGTCPQLFSAFIWYLNRVSVYNTGLTGSSTLSNHLIGCS 466
Query: 492 SNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSDCDVLGN 551
S+ C C H C +T +R++ R P+ + V + +D DVLG
Sbjct: 467 SSL----CGACGGTCCHTCYNTAFVRVQTRLPQMPRLPKKEPSVVVMQSRFLNDVDVLGT 522
Query: 552 YA-AFSALKR-----ADGSETARTIMQETYRAATERVMAELETLQYVD--QAVPTAMGRL 603
+ +SA + A E + + T ++ +R L Y + + + G
Sbjct: 523 FGRRYSAESKEASLDAKADEGSASTSNRTASSSVDRTHRLNRILDYCKKMRLIDSVTGED 582
Query: 604 ETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYAC 663
I R +V+++ + VD ++ M + E R RD + A A +L L+P+A
Sbjct: 583 TMTINGRSDFINLVSSLNKFVD---DEAMSFVSEVRMKSNRDEVLGATQAFNLDLNPFAV 639
Query: 664 GPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQ----SVEGRNFRNQFQPVLRRRVMDMF 719
P+L R A+ Q++AL S+ R FQ +
Sbjct: 640 SFSPILAYEYYRVIFAIIQNVALITATSYIVDNPLTTSLVSRWVTQHFQSIHGAFSTTSS 699
Query: 720 NNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLF 779
GFL + + + + + + S E ++R+++ RVK+R +
Sbjct: 700 RKGFLFIRNVKSSKNADHDRLPDFKLYARGTYSVISMEIKLSRLSVPSLLMFRVKNRPI- 758
Query: 780 AGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPN 839
S+A+K A + + K+ + + G LGFLL ++H +FP+ +
Sbjct: 759 -------SKASKGTTAHVFFRREHVPKK-NPVKGCLGFLLYKYHDKLFPD------CGFS 804
Query: 840 PQWFWTALQRNQLPARLLSREDIETIAFIK---KFSLDYGAINFINLAPNNVSELAMYYM 896
FW + N LP + + E F+K + DY + I++ P+ +
Sbjct: 805 CLQFWQKVCANALPKNVNIGDMGEFNNFVKFVISVTADYNEHDLIDVPPDCMLNYLENRF 864
Query: 897 ANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHP 956
N+ L + Y I TL + +R A + + A + D
Sbjct: 865 HNKFLCFYGFKDY-IGTLHGLT--TRLTYQNHAQFPYLLGESPNFASAADFALRLKDLKA 921
Query: 957 GAWTSMFASC----NLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAG 1001
T+ AS +L+R + R +V + SI KY G+ N ++Q G
Sbjct: 922 TGVTAPLASTVTRESLMRTIFEQRSLVTVSFSIEKYAGVNNNKEIYQFG 970
>gi|20026659|ref|NP_612701.1| single-stranded DNA-binding protein UL57
[Chimpanzee cytomegalovirus]
gi|19881087|gb|AAM00707.1|AF480884_59 single-stranded DNA-binding
protein UL57 [chimpanzee cytomegalovirus]
Length = 1223
Score = 137 bits (346), Expect = 9e-31
Identities = 242/1059 (22%), Positives = 372/1059 (34%), Gaps = 141/1059 (13%)
Query: 10 TIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVV 69
T P GP ++Y E E+LA LS S V +APL+VGLTV+ F +V V
Sbjct: 7 TAVAPVGPAAFLYLTKLGDETREVLAALSLCDRCSPVVIAPLLVGLTVDHDFAVSVRTPV 66
Query: 70 GSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHL-DPSTQAPNLTRLCERARRHFGFSDY 128
G V K+T + V FH R + D S ++ RLCE R +G +
Sbjct: 67 LCYDGG-----VLTKVT--SFCPFVLFFHNTRGIVDFSEDHGDVRRLCEETRLKYGLETF 119
Query: 129 TPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGG 188
P PG + T ALC LG DPD ++ V G KE + + V + G
Sbjct: 120 VPEPG--RRPTDLAALCASLGCDPDEVTAHVAVGNGLKEFLYAGQLVPCPEEAVSVRLHG 177
Query: 189 AEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPA 248
E R+P+YP LF A+ + RS F + ++ LF V
Sbjct: 178 CESLRVPLYPPTLFNSLQPDAEADDVSLETRS---AFVQERGLYVPDVSETLFYYVYTSW 234
Query: 249 AVALRCRNVDAVARAA-AHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAA 307
+LR + AA D H P F
Sbjct: 235 GQSLRFGETRILIEAALRQFVHDSQHSVKLAPHKRYF----------------------- 271
Query: 308 GGFEQRLAS-----VMAGDAALALESIVSMAVFDE------PPTDISAWPLFEGQDTAAA 356
G Q+L+S +M DA +VF + + + WP+ G
Sbjct: 272 GYMSQKLSSLEKDHLMLSDAVTCELGFSFASVFFDSAYEAADSMNFAEWPVVTGAADHRD 331
Query: 357 RANAVGAYLARAAGLVGAMVFSTNSALH---LTEVDDAGPADPKDHSKPSFYRFFLVPGT 413
A+ + V A+VFS+NS L+ L + S+ S +
Sbjct: 332 LIRALNELKLHLSTHVSALVFSSNSVLYYNRLVYLSSMKSMPGAAASQESLLKSIHFANG 391
Query: 414 HVAANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLER-- 471
+A +G V F+G +V + + +HLA+ C P L++ +++L R
Sbjct: 392 LASACEDTYNDGRKVIKFQG-----VVPKDERYGPQHLALACATCPQLVSGFVWHLNRVC 446
Query: 472 -----CDGAVIVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFA 526
GA + + + C C H C +T +R+R R P
Sbjct: 447 IYNTGLSGASTLSNHIVGCASSL---------CEACGGTCCHTCYNTAFVRVRTRLPVIH 497
Query: 527 SAARGAIGVFGTMNSMYSDCDVLGNY--------------------------------AA 554
+ V + SD DVLG + A+
Sbjct: 498 KLPKREPCVVVMQSRFLSDVDVLGTFGRRYSAESKDVGGGLDGKGDDPLGVSVGVTSAAS 557
Query: 555 FSALKRADGSETARTIMQETYRA-ATERVMAELETLQYVDQAVPTAMGRLETIITNREAL 613
S + GS + R + R R++ ++ +D G ++ R
Sbjct: 558 SSTSASSSGSGSGRLVSASVDRTHRLHRILDYCRKMRLIDPLT----GEDTVNVSGRSDF 613
Query: 614 HTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGPCPLLQLLG 673
V + + + VD ++ M + E R RD + A A +L L+PYA PLL
Sbjct: 614 VNVFSALNKFVD---DEAMSFVSEVRMKSSRDEVVGATQAFNLDLNPYAAAFHPLLSYEY 670
Query: 674 RRSNLAVYQDLALSQCHGVFAGQ----SVEGRNFRNQFQPVLRRRVMDMFNNGFLSAKTL 729
R V Q +AL S+ + FQ + GFL K +
Sbjct: 671 FRVVFLVIQHVALITAASYIVDNPLTASLVSKWVSQHFQSIHGAFSTTSSRKGFLFTKNI 730
Query: 730 TVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFAGASANASEA 789
+ + G+ A E ++R+++ RVK+R + S
Sbjct: 731 KSSKNSDHDRLLDFRLYGRGTYAVVPMEIKLSRLSVPSLLMFRVKNRPI--------SRP 782
Query: 790 AKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQWFWTALQR 849
K AS+ KR + G LGFLL + H F PG P Q FW +
Sbjct: 783 GKGGSASVFFRRDHVVKR-NPAKGCLGFLLYRHHERFF-----PGCGVPCLQ-FWQKVCS 835
Query: 850 NQLPARLLSREDIETIAFIK---KFSLDYGAINFINLAPNNVSELAMYYMANQILRYCDH 906
N LP + + + AF+K + DY + I++ P+ V N+ L Y
Sbjct: 836 NALPKNVPIGDMADFNAFVKFLVHVTSDYNDHDLIDVPPDCVLSYVENRFHNKFLCYYGF 895
Query: 907 STYF--INTLTAIIAGSRRP--PSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWTSM 962
Y ++ LT + P V A + A + L A P + S
Sbjct: 896 KDYIGSLHGLTTRLTCQNHAQFPYVLGATP-NFASPADFALHVKELKAA--GVPPPFAST 952
Query: 963 FASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAG 1001
A +L+R V R +V + SI KY G+ + ++Q G
Sbjct: 953 VARESLVRTVFEQRSLVTVPFSIEKYAGVNNSKEIYQFG 991
>gi|9628764|ref|NP_043795.1| major DNA binding protein [Human
herpesvirus 7]
gi|1706472|sp|P52339|DNBI_HSV7J Major DNA-binding protein (MDBP)
gi|7519940|pir||T41943 major DNA binding protein - human
herpesvirus 7 (strain JI)
gi|1139643|gb|AAC54703.1| major DNA binding protein
Length = 1131
Score = 129 bits (323), Expect = 4e-28
Identities = 175/924 (18%), Positives = 351/924 (37%), Gaps = 94/924 (10%)
Query: 9 TTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVV 68
T + P ++Y + IE+L LS V ++PL++ LTVE+ F V
Sbjct: 7 TVVSAPICTAAWLYILPKEQKLIEILTTLSLMEKRKSVVISPLLLNLTVENDFFPTVKTP 66
Query: 69 VGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGR-HLDPSTQAPNLTRLCERARRHFGFSD 127
+ GGT ++ K+T + + FHG L + NL +LC++ R F +
Sbjct: 67 I----INYGGTVIT-KITS--FMPVCFFFHGTDVFLKEAEDHGNLDKLCKQTREKFNLQE 119
Query: 128 YTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIG 187
+ G+ K G+ +CE +G + D L ++VV GFKE + + +V +G
Sbjct: 120 FVVN-GNRKSVDIGK-ICESVGRNADDVLCHIVVGNGFKELLFAGLLIPCVEEQIQVQVG 177
Query: 188 GAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGP 247
+IP+Y LF + + I +F F+ ++ +LF +
Sbjct: 178 ECLAIKIPLYSATLFESEETLCI---------DTCTEFIQENGFYAPQISEVLFYLIFTS 228
Query: 248 AAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAA 307
+ LR N + +A + + L + T+
Sbjct: 229 WGMTLRFNNTLELIKAGLKQFIQDTEQTVKLAPNKTYH---------------------- 266
Query: 308 GGFEQRLASVMAGDAALALESIVSMAVF------------DEPPTDISAWPLFEGQDTAA 355
G + S + D + ++++++ F + + S WP+ + +T
Sbjct: 267 -GIPGQKLSPIEKDHLMLVDAVITELTFSYTAEYLDSIYENNQIMNFSEWPIIKSAETHE 325
Query: 356 ARANAVGAYLARAAGLVGAMVFSTNSALH---LTEVDDAGPADPKDHSKPSFYRFFLVPG 412
+ + + V A+VF+ NS L+ L + + A ++ + R
Sbjct: 326 EKIVELKKLRLHLSSHVAALVFAANSILYSNKLAYISNTKQAFNSAITQETLLRSIQFCN 385
Query: 413 THVAANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERC 472
+ + N + + P +F+ HLA C P +L+ +++ L R
Sbjct: 386 SLSSLNEDFYNDARKLIKCNSSPCKE-----DKFSAFHLAYACATCPQILSHIIWNLNRM 440
Query: 473 DGAVIVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGA 532
+++ ++ + + C C H+C+ T L+R+ +R P+ + +
Sbjct: 441 S-IYNTNCGNSEIYNHIVNCSSN--LCEFCEGKCCHSCIGTALIRINSRLPQISKTTKKE 497
Query: 533 IGVFGTMNSMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYV 592
V + Y+D DVLG++ + D + A+T T + + +
Sbjct: 498 PIVMTMFSRFYADVDVLGSFGKKGVNESKDPMKEAQT----TPSLDRFKFLGMIHDYCKK 553
Query: 593 DQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANH 652
+ + G ++ ++N++ Q ++ V + + + + + R+ +
Sbjct: 554 NNLIDAITGEDNLNFKSQNDFVNMINDLIQCIEEAVSKCISEMRKTQT--SREQIENCLQ 611
Query: 653 AMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEG----RNFRNQFQ 708
+ ++ P + P + L V Q+LAL G + G + Q+Q
Sbjct: 612 SFNIDTTPLSLAFSPFFVFTYYKVILIVLQNLALIIGTGYVVDRPCTGNLISKWLMQQYQ 671
Query: 709 PVLRRRVMDMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFP 768
+ F GFL+ KT+ +A + A++S + + R+++
Sbjct: 672 SLYGAFYNSHFKKGFLNMKTVKIASNVDMEQYIDFNLFKSGKYAKTSIQAKLCRLSMQCL 731
Query: 769 KELRVKSRVLFAGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFP 828
K+ RVK+R F + N ++K ++ + L G L FLL ++H +FP
Sbjct: 732 KDFRVKNRP-FNKPNKNTQN---------NPFFKKVKQKKNPLSGCLSFLLFKYHERLFP 781
Query: 829 NGKPPGSNQPNPQWFWTALQRNQLPAR--LLSREDIET-IAFIKKFSLDYGAINFINLAP 885
N K FW + N +P + + ED+ + I F + + Y I+ +++ P
Sbjct: 782 NLKISCLE------FWQRILLNNMPKTIDIGNVEDMRSFIKFTFRVTNSYDEIDLLDIQP 835
Query: 886 NNVSELAMYYMANQILRYCDHSTY 909
+ YY N++L + Y
Sbjct: 836 ECLLSFIEYYFHNKLLSVLGYRDY 859
>gi|31377968|gb|AAP50618.1| rh92 [Rhesus cytomegalovirus strain 68-1]
Length = 1160
Score = 128 bits (322), Expect = 6e-28
Identities = 217/1027 (21%), Positives = 379/1027 (36%), Gaps = 106/1027 (10%)
Query: 14 PPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGSRT 73
P GP Y+Y E E+LA LS + V +APL++GLTV+ F +V V
Sbjct: 11 PVGPAAYLYFTKTNPEMNEVLATLSLCDRSTPVVIAPLLMGLTVDQDFCTSVRTPVVCYD 70
Query: 74 TGLGGTAVSLKLTPSHYSSSVYVFHGGRH-LDPSTQAPNLTRLCERARRHFGFSDYTPRP 132
G V K+T + V FH R + S + RLC+ R+ + Y P
Sbjct: 71 GG-----VLTKVT--SFCPFVMYFHNTREIIHFSEPHGEVQRLCDETRQKYSLETYVPEE 123
Query: 133 GDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEVH 192
G + T ALC G DP ++++VV G KE + + + +
Sbjct: 124 G--RAPTDLAALCTAAGCDPQEVVVHVVVGNGLKEFLYAGQLIPCFEEAVPTRLNDCDAV 181
Query: 193 RIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVAL 252
R+P+YP LF + ++ + + R+ F + ++ LF V AL
Sbjct: 182 RVPLYPPTLFGSLQADADSDEVSLDKRN---SFVESRGLYVPAVSEALFYYVYTSWCQAL 238
Query: 253 RCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFEQ 312
R + AA ++ + L + + + + + +
Sbjct: 239 RFSETKVLIEAALKQFVHDSQQSVKLAPHKKYFGYTSQKLSSLEKDQLMLSDAVICELGF 298
Query: 313 RLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANAVGAYLARAAGLV 372
ASV A A +S+V S WP+ A+ + +
Sbjct: 299 SFASVFLDSAYGASDSMV-----------YSEWPVVMNAADHRELIKALTELKLHLSTHI 347
Query: 373 GAMVFSTNSAL------HLTEVDDAGPADPKDHSKPSFYRFF-----LVPGTHVAANPQV 421
A++FS NS L +LT +A + F L T+ A +
Sbjct: 348 SALLFSCNSILYQNRLVYLTSNKNASGTGASQEALLKSIHFANGLTGLCEDTYNDARKLI 407
Query: 422 DREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCD--GAVIVG 479
G VV + +A HLA++CG P L + +++YL R + G
Sbjct: 408 KSSGTVVK-------------DERYAPHHLALICGTCPQLFSALVWYLNRVSVYNTGLTG 454
Query: 480 RQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTM 539
+ S+ C C H C +T +R++ R P+ + V
Sbjct: 455 SSTLSNHLIGCSSSL----CGACGGTCCHTCYNTAFVRVQTRLPQIPRLPKKEPCVVVMQ 510
Query: 540 NSMYSDCDVLGNYA-AFSA--------LKRADGS-----ETARTIMQETYRAATERVMAE 585
+ +D D LG + +SA K +GS +A + + T+R R++
Sbjct: 511 SRFLNDVDTLGTFGRRYSAESKETNLDTKADEGSAPTSNRSASSSVDRTHR--LNRILDY 568
Query: 586 LETLQYVDQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRD 645
+ ++ +D + G I R +V+++ + VD ++ M + E R RD
Sbjct: 569 CKKMRLID----SVTGEDTMTINGRADFINLVSSLNKFVD---DEAMSFVSEVRMKSSRD 621
Query: 646 GLGEANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQ----SVEGR 701
+ A A +L L PYA P+L R LA+ Q++AL S+ R
Sbjct: 622 EVSGATQAFNLDLSPYAVAFNPILSYEYYRVILAIIQNVALITATSYIVDNPLTTSLVSR 681
Query: 702 NFRNQFQPVLRRRVMDMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVA 761
FQ + GFL + + + + + + E ++
Sbjct: 682 WVTQHFQSIHGAFSTTSSRKGFLFIRNVKSSKNVDHDRLPDFKLYARGTYSVIPMEIKLS 741
Query: 762 RVTLGFPKELRVKSRVLFAGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQ 821
R+++ RVK+R + S+A+K A + + K+ + + G LGFLL +
Sbjct: 742 RLSVPALLMFRVKNRPI--------SKASKGTTAHVFFRREHVPKK-NPVKGCLGFLLYK 792
Query: 822 FHAAIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIK---KFSLDYGAI 878
+H +FP+ + FW + N LP + + E F+K + DY
Sbjct: 793 YHDKLFPD------CGFSCLQFWQKVCANALPKNVSIGDMGEFNNFVKFVISVTADYNEH 846
Query: 879 NFINLAPNNVSELAMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGG 938
+ I++AP+ + + N+ L + Y I TL + +R A +
Sbjct: 847 DLIDVAPDCMLNYLEHRFHNKFLCFYGFKDY-IGTLHGLT--TRLTYQNHAQFPYLLGET 903
Query: 939 AGLEAGARALMDAVDAHPGAWTSMFASC----NLLRPVMAARPMVVLGLSISKYYGMAGN 994
+ A + D + A+ +L+R + R ++ + S+ KY G+ N
Sbjct: 904 PNFASPADFALRLKDLKAAGVIAPLAATVTRESLMRTIFEQRSLITVSFSVEKYAGVNSN 963
Query: 995 DRVFQAG 1001
++Q G
Sbjct: 964 KDIYQFG 970
>gi|2746271|gb|AAC40755.1| single-stranded DNA-binding protein
[Human herpesvirus 7]
Length = 1131
Score = 128 bits (322), Expect = 6e-28
Identities = 175/924 (18%), Positives = 351/924 (37%), Gaps = 94/924 (10%)
Query: 9 TTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVV 68
T + P ++Y + IE+L LS V ++PL++ LTVE+ F V
Sbjct: 7 TVVSAPICTAAWLYILPKEQKLIEILTTLSLMEKRKSVVISPLLLNLTVENDFFPTVKTP 66
Query: 69 VGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGR-HLDPSTQAPNLTRLCERARRHFGFSD 127
+ GGT ++ K+T + + FHG L + NL +LC++ R F +
Sbjct: 67 I----INYGGTVIT-KITS--FMPVCFFFHGTDVFLKEAEDHGNLDKLCKQTREKFNLQE 119
Query: 128 YTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIG 187
+ G+ K G+ +CE +G + D L ++VV GFKE + + +V +G
Sbjct: 120 FVVN-GNRKPVDIGK-ICESVGRNADDVLCHIVVGNGFKELLFAGLLIPCVEEQIQVQVG 177
Query: 188 GAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGP 247
+IP+Y LF + + I +F F+ ++ +LF +
Sbjct: 178 ECLAIKIPLYSATLFESEETLCI---------DTCTEFIQENGFYAPQISEVLFYLIFTS 228
Query: 248 AAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAA 307
+ LR N + +A + + L + T+
Sbjct: 229 WGMTLRFNNTLELIKAGLKQFIQDTEQTVKLAPNKTYH---------------------- 266
Query: 308 GGFEQRLASVMAGDAALALESIVSMAVF------------DEPPTDISAWPLFEGQDTAA 355
G + S + D + ++++++ F + + S WP+ + +T
Sbjct: 267 -GIPGQKLSPIEKDHLMLVDAVITELTFSYTAEYLDSIYENNQIMNFSEWPIIKSAETHE 325
Query: 356 ARANAVGAYLARAAGLVGAMVFSTNSALH---LTEVDDAGPADPKDHSKPSFYRFFLVPG 412
+ + + V A+VF+ NS L+ L + + A ++ + R
Sbjct: 326 EKIVELKKLRLHLSSHVAALVFAANSILYSNKLAYISNTKQAFNSAITQETLLRSIQFCN 385
Query: 413 THVAANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERC 472
+ + N + + P +F+ HLA C P +L+ +++ L R
Sbjct: 386 SLSSLNEDFYNDARKLIKCNSSPCKE-----DKFSAFHLAYACATCPQILSHIIWNLNRM 440
Query: 473 DGAVIVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGA 532
+++ ++ + + C C H+C+ T L+R+ +R P+ + +
Sbjct: 441 S-IYNTNCGNSEIYNHIVNCSSN--LCEFCEGKCCHSCIGTALIRINSRLPQISKTTKKE 497
Query: 533 IGVFGTMNSMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYV 592
V + Y+D DVLG++ + D + A+T T + + +
Sbjct: 498 PIVMTMFSRFYADVDVLGSFGKKGVNESKDPMKEAQT----TPSLDRFKFLGMIHDYCKK 553
Query: 593 DQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANH 652
+ + G ++ ++N++ Q ++ V + + + + + R+ +
Sbjct: 554 NNLIDAITGEDNLNFKSQNDFVNMINDLIQCIEEAVSKCISEMRKTQT--SREQIENCLQ 611
Query: 653 AMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEG----RNFRNQFQ 708
+ ++ P + P + L V Q+LAL G + G + Q+Q
Sbjct: 612 SFNIDTTPLSLAFSPFFVFTYYKVILIVLQNLALIIGTGYVVDRPCTGNLISKWLMQQYQ 671
Query: 709 PVLRRRVMDMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFP 768
+ F GFL+ KT+ +A + A++S + + R+++
Sbjct: 672 SLYGAFYNSHFKKGFLNMKTVKIASNVDMEQYIDFNLFKSGKYAKTSIQAKLCRLSMQCL 731
Query: 769 KELRVKSRVLFAGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFP 828
K+ RVK+R F + N ++K ++ + L G L FLL ++H +FP
Sbjct: 732 KDFRVKNRP-FNKPNKNTQN---------NPFFKKVKQKKNPLSGCLSFLLFKYHERLFP 781
Query: 829 NGKPPGSNQPNPQWFWTALQRNQLPAR--LLSREDIET-IAFIKKFSLDYGAINFINLAP 885
N K FW + N +P + + ED+ + I F + + Y I+ +++ P
Sbjct: 782 NLKISCLE------FWQRILLNNMPKTIDIGNVEDMRSFIKFTFRVTNSYDEIDLLDIQP 835
Query: 886 NNVSELAMYYMANQILRYCDHSTY 909
+ YY N++L + Y
Sbjct: 836 ECLLSFIEYYFHNKLLSVLGYRDY 859
>gi|9628343|ref|NP_042934.1| major DNA binding protein [Human
herpesvirus 6]
gi|1706470|sp|P52338|DNBI_HSV6U Major DNA-binding protein (MDBP)
gi|854020|emb|CAA58375.1| U41, major DNA binding protein [Human
herpesvirus 6]
gi|1044871|emb|CAA63167.1| mdbp [Human herpesvirus 6]
Length = 1132
Score = 122 bits (305), Expect = 5e-26
Identities = 198/1022 (19%), Positives = 380/1022 (36%), Gaps = 105/1022 (10%)
Query: 9 TTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVV 68
T + P ++Y E +++L++LS +S + ++PL++ LTVE+ F V
Sbjct: 7 TVVSAPVSTAAWIYVFPKDKELLDVLSVLSLMERNSPIVISPLLMNLTVENDFSTTVKTP 66
Query: 69 VGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHL-DPSTQAPNLTRLCERARRHFGFSD 127
+ T GGT ++ K+T + + FHG L + +L RLCE+ R+ F
Sbjct: 67 I----TNFGGTILT-KITS--FMPVCFFFHGTEQLVGMAEDHGDLIRLCEQTRQKFHLQS 119
Query: 128 YTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIG 187
+ + +ALC +G D D + ++ GFKE + + +V +G
Sbjct: 120 FEVPTA--RKVIDIKALCSAVGKDADSVICHVACGNGFKELLFAGLLIPCVEEQIQVQVG 177
Query: 188 GAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGP 247
+IP+Y LF E S +F FF L+ LF V
Sbjct: 178 EYSCVKIPLYSATLF---------ETEETISLSSCTEFIQERGFFLPALSETLFYYVFTS 228
Query: 248 AAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAA 307
LR N + A + + L T+
Sbjct: 229 WGTTLRFSNTKELIDAGLKQFTQDGEQTVKLAPHKTYL---------------------- 266
Query: 308 GGFEQRLASVMAGDAALALESIVSMAVFDE---------PPTDI---SAWPLFEGQDTAA 355
G + S + D + ++S+V+ F P+ I + WP+ +T A
Sbjct: 267 -GISGQKISAVEKDFLMLVDSVVTELSFSHVAEYLDSVYDPSQIMNFNDWPIIRNSETHA 325
Query: 356 ARANAVGAYLARAAGLVGAMVFSTNSALHLTE---VDDAGPADPKDHSKPSFYRFFLVPG 412
R + + + ++F+ NS L+ ++ + + A ++ R
Sbjct: 326 ERMAQLTNLKLHLSSHLAVLIFAPNSILYCSKLAFIPNVKQAFNSVMTQELLLRSLSFCN 385
Query: 413 THVAANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERC 472
+ + V + + + G +F+ HLA C SP LL+ +++ L R
Sbjct: 386 ALSSLSDDVYNDNRKIIKCDSTS-----GKDDKFSANHLAYACATSPQLLSFVVWNLNRM 440
Query: 473 DGAVIVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGA 532
G +++ ++ + + C C +C+ T ++R+ R P +
Sbjct: 441 S-VYNAGNAHTEIYNHLVNCSAN--LCEFCDGKCCQSCIGTAMVRVGTRLPAIPKNVKKE 497
Query: 533 IGVFGTMNSMYSDCDVLGNYA--AFSALKRADGSETARTIMQETYRAATERVMAELETLQ 590
V + Y++ D+LG++ S LK + Q T + ++++
Sbjct: 498 PLVMSMFSRYYAEVDILGSFGRKPVSELKEIGKDQ------QNTLSLDRGKFVSQIFDYC 551
Query: 591 YVDQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKF-RDGLGE 649
+ + G + +++ ++++ + Q ++ E + R +VE R + R+ +
Sbjct: 552 KKNSLIDPVTGEDTFNVRSKKDFVSIIHGLTQCIE---ECVSRCIVEMRRTQTPREQIEN 608
Query: 650 ANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFR----N 705
+ ++ PYA P L + L V Q+LAL G + G +
Sbjct: 609 CLQSFNVDTTPYATAFSPFLTFSYYKVILTVLQNLALIVASGHVVDRPCTGNSISKWLVQ 668
Query: 706 QFQPVLRRRVMDMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTL 765
Q+Q + GFL+ +T+ VA + +++ + + R+++
Sbjct: 669 QYQSLYGTFHSSYLKKGFLNTRTVKVASNVDMEQILDCDLYKSGKYVKTTIQAKLCRLSM 728
Query: 766 GFPKELRVKSRVLFAGASANASEAAKARVASLQSAYQKPDK-RVDILLGPLGFLLKQFHA 824
++ R+K+R N S ++ A ++K K + + L G + FLL ++H
Sbjct: 729 QCLRDFRIKNRPF------NKS----SKTAHNNPYFKKNVKHKKNPLSGCISFLLFKYHD 778
Query: 825 AIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIK-KFSL--DYGAINFI 881
+FPN K W N +P L E FIK FS+ Y I+ I
Sbjct: 779 KLFPNVKISCLE------LWQRFLLNNVPKTLDIGNPEEVKTFIKFAFSITNTYDEIDII 832
Query: 882 NLAPNNVSELAMYYMANQILRYCDHSTYF--INTLTAIIAGSRRPPSVQAAAAWSAQGGA 939
++ P +S Y N+ L Y ++ LT+ + ++ P + +
Sbjct: 833 DIQPECLSTFIDCYFHNKFLSALGFHDYLTSLHGLTSKLV-TQNPVLFPVVLDKQPKFSS 891
Query: 940 GLEAGARALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQ 999
E +D P + + + +R +V GL++ K+ +A N FQ
Sbjct: 892 IQEYLVYVKKLVLDGVPNPVIASLSKEPNFGTIFTSRSLVTFGLTLEKFVSLA-NREYFQ 950
Query: 1000 AG 1001
G
Sbjct: 951 FG 952
>gi|9633112|ref|NP_050222.1| major DNA binding protein [Human
herpesvirus 6B]
gi|1706471|sp|P52538|DNBI_HSV6Z Major DNA-binding protein (MDBP)
gi|11278306|pir||T44001 major DNA binding protein [imported] - human
herpesvirus 6
gi|405159|gb|AAB06339.1| U41 [Human herpesvirus 6B]
gi|4996029|dbj|BAA78262.1| major DNA binding protein [Human
herpesvirus 6]
Length = 1132
Score = 120 bits (300), Expect = 2e-25
Identities = 199/1022 (19%), Positives = 377/1022 (36%), Gaps = 105/1022 (10%)
Query: 9 TTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVV 68
T + P ++Y E +++L++LS +S V ++PL++ LTVE+ F V
Sbjct: 7 TVVSAPVSTAAWIYVFPKEKELLDVLSVLSLMERNSPVVISPLLMNLTVENDFSTTVKTP 66
Query: 69 VGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHL-DPSTQAPNLTRLCERARRHFGFSD 127
+ T GGT ++ K+T + + FHG L + +L RLCE+ R+ F
Sbjct: 67 I----TNFGGTILT-KIT--SFMPVCFFFHGTEQLVGMAEDHGDLIRLCEQTRQKFHLQS 119
Query: 128 YTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIG 187
+ + +ALC +G D D + ++ GFKE + + +V +G
Sbjct: 120 F--EVPTARKVIDIKALCSAVGKDADSVICHVACGNGFKELLFAGLLIPCVEEQIQVQVG 177
Query: 188 GAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGP 247
+IP+Y LF E S +F FF L+ LF V
Sbjct: 178 EYSCVKIPLYSATLF---------ETEETISLSSCTEFIQERGFFLPALSETLFYYVFTS 228
Query: 248 AAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAA 307
LR N + A + + L T+
Sbjct: 229 WGTTLRFSNTKELIDAGLKQFTQDGEQTVKLAPHKTYL---------------------- 266
Query: 308 GGFEQRLASVMAGDAALALESIVSMAVFDE---------PPTDI---SAWPLFEGQDTAA 355
G + S + D + ++S+V+ F P+ I + WP+ +T A
Sbjct: 267 -GISGQKISAVEKDFLMLVDSVVTELSFSHVAEYLDSVYDPSQIMNFNDWPIIRNSETHA 325
Query: 356 ARANAVGAYLARAAGLVGAMVFSTNSALH---LTEVDDAGPADPKDHSKPSFYRFFLVPG 412
R + + + ++F+ NS L+ L + + A ++ R
Sbjct: 326 ERMAQLTNLKLHLSSHLAVLIFAPNSILYCSKLAFIPNVKQAFNSVMTQELLLRSLSFCN 385
Query: 413 THVAANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERC 472
+ V + + + G +F+ HLA C P LL+ +++ L R
Sbjct: 386 ALSSLTEDVYNDNRKIIKCDSTS-----GKDDKFSANHLAYACATCPQLLSYVVWNLNRM 440
Query: 473 DGAVIVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGA 532
G +++ ++ + + C C +C+ T ++R+ R P +
Sbjct: 441 -SVYNAGNAYTEIYNHLVNCSAN--LCEFCDGKCCQSCIGTAMVRVGTRLPAIPKNVKKE 497
Query: 533 IGVFGTMNSMYSDCDVLGNYA--AFSALKRADGSETARTIMQETYRAATERVMAELETLQ 590
V + Y++ D+LG++ S LK + Q T + ++++
Sbjct: 498 PLVMSMFSRYYAEVDILGSFGRKPVSELKEIGKDQ------QNTLSLDRGKFVSQIFDYC 551
Query: 591 YVDQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKF-RDGLGE 649
+ + G + +++ ++++ + Q ++ E + R +VE R + R+ +
Sbjct: 552 KKNSLIDPVTGEDTFNVRSKKDFVSIIHGLTQCIE---ECVSRCIVEMRRTQTPREQIEN 608
Query: 650 ANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFR----N 705
+ ++ PYA P L + L V Q+LAL G + G +
Sbjct: 609 CLQSFNVDTTPYATAFSPFLTFAYYKVILTVLQNLALIVASGHVVDRPCTGNSISKWLVQ 668
Query: 706 QFQPVLRRRVMDMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTL 765
Q+Q + GFL+ +T+ VA + +++ + + R+++
Sbjct: 669 QYQSLYGTFHSSYLKKGFLNTRTVKVASNVDMEQILDCDLYKSGKYVKTTIQAKLCRLSM 728
Query: 766 GFPKELRVKSRVLFAGASANASEAAKARVASLQSAYQKPDK-RVDILLGPLGFLLKQFHA 824
++ R+K+R N S ++ A ++K K + + L G + FLL ++H
Sbjct: 729 QCLRDFRIKNRPF------NKS----SKTAHNNPYFKKNVKHKKNPLSGCISFLLFKYHD 778
Query: 825 AIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIK-KFSL--DYGAINFI 881
+FPN K W N +P L E FIK FS+ Y I+ I
Sbjct: 779 KLFPNVKISCLE------LWQRFLLNNVPKTLDIGNPEEVKTFIKFAFSITNTYDEIDII 832
Query: 882 NLAPNNVSELAMYYMANQILRYCDHSTYF--INTLTAIIAGSRRPPSVQAAAAWSAQGGA 939
++ P +S Y N+ L Y ++ LT+ + ++ P + +
Sbjct: 833 DIQPECLSTFIDCYFHNKFLSALGFHDYLTSLHGLTSKLV-TQNPVLFPVVLDKQPKFSS 891
Query: 940 GLEAGARALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQ 999
E +D P + + + +R +V GL++ K+ +A N FQ
Sbjct: 892 IQEYLVYVKKLVLDGVPNPVIASLSKEPNFGTIFTSRSLVTFGLTLEKFVSLA-NREYFQ 950
Query: 1000 AG 1001
G
Sbjct: 951 FG 952
>gi|232004|sp|P30672|DNBI_MCMVS Major DNA-binding protein (MDBP)
gi|476348|pir||A44051 DNA-binding protein - murine cytomegalovirus
(strain Smith)
gi|60535|emb|CAA47414.1| major DNA binding protein (MDBP) [Mouse
cytomegalovirus 1]
Length = 1191
Score = 118 bits (295), Expect = 8e-25
Identities = 238/1196 (19%), Positives = 435/1196 (35%), Gaps = 110/1196 (9%)
Query: 14 PPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGSRT 73
P P +++ E +++A +S + V +APL++ LTV+ F V + +
Sbjct: 11 PVAPAVWMFFLKKTRELADIVAAMSLCDKATPVVIAPLLIDLTVDRDFCGAVRTPMSTYE 70
Query: 74 TGLGGTAVSLKLTPSHYSSSVYVFHGGRH-LDPSTQAPNLTRLCERARRHFGFSDYTPRP 132
G V K+T + + FH LD ++ LC+ ARR FG ++P
Sbjct: 71 GG-----VLTKVTS--FCPFAFFFHNTDEILDVVEDHGDVVHLCDDARRRFGVQAFSPLA 123
Query: 133 GDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEVH 192
+ T + LC+ LG+ P ++V G KE + + KV +G +
Sbjct: 124 N--RDRTDVDVLCDELGIAPAEYTGHVVCGNGLKELLYAGQLIPCPEEAVKVQVGAVDGV 181
Query: 193 RIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVAL 252
++P+YP LF A+ +A + + + F++ L+ LF + +L
Sbjct: 182 KVPLYPYTLFSGGADAAHADGPSAAV-ACDDPWVLEHGFYDPALSEALFYFMFTSWGQSL 240
Query: 253 RCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFEQ 312
R + A ++ + L T F+ G T + K A +Q
Sbjct: 241 RVCETSRLIEAGLQQFVEDTQQTVKL------TPFKKYHGYTSQ-------KLTAVERDQ 287
Query: 313 RLA-SVMAGDAALALESIVSMAVFD-EPPTDISAWPLFEGQDTAAARANAVGAYLARAAG 370
+ + + A + SI +V++ ++ WPL + T A + + + A
Sbjct: 288 LMTVDAVCSELAFSYASIYLDSVYEFSTASNFLEWPLVKNAKTHADLLDNLRDFQLHLAK 347
Query: 371 LVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFY-------RFFLVPGTHVAANPQVDR 423
+ A++FS+NS L+ T + A +S PS RFF +
Sbjct: 348 HIAALIFSSNSILYQTRIVFVPSAGKGANSNPSAQDSLLKSIRFF---NGLTGMYDDILN 404
Query: 424 EGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEM 483
+ FEG VG ++++ HLA CG SP L + ++++ R
Sbjct: 405 DAKKTIRFEGA-----VGRDEKYSPHHLAYFCGTSPQLFSTLMWFFNRMSIYSTGVTSGD 459
Query: 484 DVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMY 543
VF ++ ++ C C H C T+ +R+ R P + V ++ +
Sbjct: 460 TVFSHIVNAGSK--LCGACGGRCCHTCYATSFIRVNTRLPGIPKQIKKEPVVVTLLSRAF 517
Query: 544 SDCDVLGNYAAFSALKRAD---------GSETARTIMQETYRAATERVMAELETLQYVDQ 594
+D D+LGNY L+ + G T A+ ++ ++Y+ Q
Sbjct: 518 ADADLLGNYGKRYGLESREAGDGGGGGAGGRTDEVAAGPPAGGASGLNFVSVDRMKYLGQ 577
Query: 595 AVP-TAMGRLETIITNREALH--------TVVNNVRQVVDREVEQLMRNLVEGRNFKFRD 645
+ L IT + ++ V + Q +D V + ++ R+ RD
Sbjct: 578 VLDYCKKNSLIDAITGEDIINVRTKRDFVATVTALNQTIDDAVCRFAMDV--RRSGHGRD 635
Query: 646 GLGEANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRN 705
+ + + +L L PYA P+L R+ ++ Q+LAL +
Sbjct: 636 EISGSTQSFNLDLSPYATAFSPVLSFQYYRTMFSIIQNLALINAASYVVDNPLTTAQISK 695
Query: 706 ----QFQPVLRRRVMDMFNNGFLSAK-TLTVALSEGAAICAPSLTAGQTAPAESSFEGDV 760
FQ + GFL+ K T + E I + S E
Sbjct: 696 WVTLHFQSICGAFGTTPLKKGFLNVKDTKNLKSVEFERIMDFRSFQETGRYRKISTEIKS 755
Query: 761 ARVTLGFPKELRVKSRVLFAGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLK 820
++++ K R+K+R + S+ ++ V + A Q R + + G L FLL
Sbjct: 756 CKMSVQSLKSCRIKNRPI--------SKTPQSSVFFKKGALQ----RKNPIKGCLSFLLF 803
Query: 821 QFHAAIFPNGKPPGSNQPNPQWFWTALQRNQLP--ARLLSREDIET-IAFIKKFSLDYGA 877
+ H +FP FW + +N LP + ED + + F+ + DY
Sbjct: 804 RCHEKLFPRCGLSCLE------FWQRVLQNSLPRSVNVGKVEDFDNLVRFLLTVTDDYDE 857
Query: 878 INFINLAPNNVSELAMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQG 937
+ +++ P+ + N+ L Y +++T+ + +R P + +
Sbjct: 858 SDVVDIQPDCLLSYVENRFHNKFL-YMFGFRDYMSTIQGM--STRLTPQNHSQFPCLLKD 914
Query: 938 GAGLEAGARALMD----AVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAG 993
+ A ++ +D + +L+ + R +V + ++ KY G
Sbjct: 915 APKFASIAEYVLHFKKMKLDGVKAPQVATITREPVLKKLFDGRSLVSVSFAVEKYSSSMG 974
Query: 994 NDRVFQAGNWA---------SLMGGKNACPLLIFDRTRKFVLACPRAGFVCAASSLGGGA 1044
VFQ G SL G F R R +++A + S
Sbjct: 975 TRDVFQFGQIGYYVGSGVDRSLNTGSMGTQDYRFMRYR-YIIATKLVDVLIRRSRRENVM 1033
Query: 1045 HESSLCEQ--LRGIISEGGAAVASSVFVATVKSLGPRTQQLQIEDWLALL-EDEYLSEEM 1101
++ + L + S G +A + +I+D L + + EY++ M
Sbjct: 1034 YDRDVVRSRVLAALDSTGLDVDPELAAIAELMEGRDEGDIPEIDDILFYVDQQEYIARSM 1093
Query: 1102 MELTARALERGNGEWSTDAALE-VAHEAEALVSQLGNAGEVFNFGDFGCEDDNATP 1156
ERG ++S + E A A A S G G G G D + P
Sbjct: 1094 YRKMRSLAERGVTDFSLASLREATATNATAAGSAAGGGGSATEGGGGGAAADESGP 1149
>gi|29423452|gb|AAO73453.1| major DNA-binding protein [Human
herpesvirus 5]
Length = 1235
Score = 101 bits (252), Expect = 7e-20
Identities = 131/572 (22%), Positives = 208/572 (35%), Gaps = 60/572 (10%)
Query: 10 TIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVV 69
T P GP ++Y +E E+LA LS S V +APL+ GLTVE+ F +V
Sbjct: 7 TALAPVGPAAFLYFSRLNAETQEILATLSLCDRSSSVVIAPLLAGLTVEADFGVSV---- 62
Query: 70 GSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYT 129
RT L L S ++Y H + + ++ RLCE AR+ + YT
Sbjct: 63 --RTPVLCYDGGVLTKVTSFCPFALYFHHTQGIVAFTEDHGDVHRLCEDARQKYALEAYT 120
Query: 130 PRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGA 189
P + T ALC +G +++VV G KE + + + V + G
Sbjct: 121 PEAD--RVPTDLAALCAAVGCQASETTVHVVVGNGLKEFLFAGQLIPCVEEATTVRLHGG 178
Query: 190 EVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAA 249
E R+P+YP LF A+ + + RS F + ++ LF V
Sbjct: 179 EAVRVPLYPPTLFNSLQLDAEADEVSLDARS---AFVEARGLYVPAVSETLFYYVYTSWC 235
Query: 250 VALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGG 309
+LR + AA ++ + L K G
Sbjct: 236 QSLRFSEPRVLIEAALRQFVHDSQQSVKLAPH----------------------KRYLGY 273
Query: 310 FEQRLAS-----VMAGDAALALESIVSMAVFDE---PPTD---ISAWPLFEGQDTAAARA 358
QRL+S +M DA + + +VF + P + S WPL
Sbjct: 274 MSQRLSSLEKDHLMLSDAVVCELAFSFASVFFDSAYQPAESMLFSEWPLVTNATDHRDLI 333
Query: 359 NAVGAYLARAAGLVGAMVFSTNSALH-----LTEVDDAGPADPKDHSKPSFYRFFLVPGT 413
A+ + V A+VFS NS L+ + P+ S+ + +
Sbjct: 334 RALTELKLHLSTHVAALVFSANSVLYQHRLVYLQSSARHPSAGGTASQETLLKAIQFTNG 393
Query: 414 HVAANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCD 473
AA V + V F+G P + + +HLA++CG P L++ ++YL R
Sbjct: 394 LSAACEDVYNDARKVLKFQGAPLK-----DERYGPQHLALVCGTCPQLVSGFVWYLNRVS 448
Query: 474 --GAVIVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARG 531
+ G + + C C H C T +R+R R P +
Sbjct: 449 VYNTGLSGSSTLTNHLVGCAAGL----CEACGGTCCHTCYQTAFVRVRTRLPVVPKQPKK 504
Query: 532 AIGVFGTMNSMYSDCDVLGNYAAFSALKRADG 563
V + +D D+LG++ + DG
Sbjct: 505 EPCVITVQSRFLNDVDILGSFGRRYNVDAKDG 536
Score = 57.8 bits (138), Expect = 1e-06
Identities = 122/564 (21%), Positives = 205/564 (35%), Gaps = 65/564 (11%)
Query: 644 RDGLGEANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQ----SVE 699
RD + A A +L L+PYA PLL RS V Q++AL ++
Sbjct: 658 RDEVAGATQAFNLDLNPYAVAFQPLLAYAYFRSVFYVIQNVALITATSYIVDNPLTTNLV 717
Query: 700 GRNFRNQFQPVLRRRVMDMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGD 759
+ FQ + GFL K + + + Q A E
Sbjct: 718 SKWMTQHFQSIHGAFSTTSSRKGFLFTKQIKSSKNSDHDRLLDFRLYAQGTYAVVPMEIK 777
Query: 760 VARVTLGFPKELRVKSRVLFAGASANASEAAKARVASLQSAYQKPD--KRVDILLGPLGF 817
++R+++ +RVK+R ++ NA S + + D R + G LGF
Sbjct: 778 LSRLSVPTLIMVRVKNRPIYRAGKGNAG-----------SVFFRRDHVPRRNPAKGCLGF 826
Query: 818 LLKQFHAAIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIK---KFSLD 874
LL + H +FP P FW + N LP + + E AF+K + D
Sbjct: 827 LLYRHHERLFPECGLPCLQ------FWQKVCSNALPKNVPIGDMGEFNAFVKFLVAVTAD 880
Query: 875 YGAINFINLAPNNVSELAMYYMANQILRYCDHSTYF--INTLTAIIAGSRR---PPSVQA 929
Y + +++AP+ V N+ L Y Y ++ LT + P + A
Sbjct: 881 YQEHDLLDVAPDCVLSYVESRFHNKFLCYYGFKDYIGSLHGLTTRLTTQNHAQFPHVLGA 940
Query: 930 AAAWSAQGGAGLEAGARALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYY 989
+ +S+ L + L A P + A +L+R V R +V + +S+ KY
Sbjct: 941 SPRFSSPAEFALH--VKGLKTA--GVPAPMAATVARESLVRSVFEHRSLVTVPVSVEKYA 996
Query: 990 GMAGNDRVFQAGNWASLMGGKNACPLLIFDRT--------RKFVLACPRAGFVCAASSLG 1041
G+ + ++Q G G L + + ++++LA A + S
Sbjct: 997 GINNSKEIYQFGQIGYFSGNGVERSLNVSSMSGQDYRFMRQRYLLATRLADVLIKRSRRE 1056
Query: 1042 GGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRTQQLQIEDWLALLED-EYLSEE 1100
++ L + + + +A + L R + +D L ++ E L+
Sbjct: 1057 NVLFDADLIKNRVMLALDAENLDCDPEVMAVYEILSVREEIPASDDVLFFVDGCEALAAS 1116
Query: 1101 MMELTARALERGNGEWS---------------TDAALEVAHEAEALVSQLGNAGEVFNFG 1145
+M+ A E+G ++S TDAA H+ AL + G G G
Sbjct: 1117 LMDKFAALQEQGVEDFSLENLRRVLDADAQRLTDAAGGEVHDLSALFAPSG-VGAASGVG 1175
Query: 1146 DFG-----CEDDNATPFGGPGAPG 1164
G N+ FG PG G
Sbjct: 1176 GGGLLLGESVTGNSICFGVPGETG 1199
>gi|2147646|pir||S69894 major DNA-binding protein - cottontail
rabbit herpesvirus (fragment)
gi|555180|gb|AAB00772.1| major DNA binding protein
Length = 483
Score = 100 bits (248), Expect = 2e-19
Identities = 115/481 (23%), Positives = 189/481 (38%), Gaps = 54/481 (11%)
Query: 14 PPGPLGYVYARACPSEGIELLALLSARSGDSDVAV--APLVVGLTVESGFEANVAVVVGS 71
P GP GY+Y P + L L+ + V PL+ G TVE F NV V+
Sbjct: 51 PSGPCGYIYVY--PKNEFQRLKLVYWVTDTPGAIVFSVPLLHGFTVEKQFPMNVKVIHKK 108
Query: 72 RTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPR 131
+ T + L++ S Y + +FH + P P L +LC+ AR+ FG+ +T
Sbjct: 109 ----VDPTTMLLRV--SIYHREMIIFHNAESIQPIFLGPGLEKLCKEARQCFGYEVFTSP 162
Query: 132 PGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEV 191
P + E + L + + + +TE FKE + + +KV I
Sbjct: 163 P---QPEASVNLKSLLLADEETDFIAAIAITEAFKERLYSGHLVPVASLREKVDIAEYYA 219
Query: 192 HRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVA 251
++IP++ LF D S+ K FF ++R +FEA+ A A
Sbjct: 220 YKIPLFDQDLFKKD--------------SVQTKMQV---FFCEDVSRYMFEAIYTGIAQA 262
Query: 252 LRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGGFE 311
+R R+V +V +A ++ + A K G G
Sbjct: 263 IRMRHVSSVIQAMEDQCLKDHVKIA----------------KVVHRKEYPGSVVHDGECA 306
Query: 312 QRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANAVGAYLARAAGL 371
R+ A + AL+ + ++S + + WP+ A A V R
Sbjct: 307 LRIVDATATEIALSYDFLLSSQDIAQ-HLNYLQWPILSMLRYRARVAAYVIGMQTRYLH- 364
Query: 372 VGAMVFSTNSALHLTEVDDAGPADPKD--HSKPSFYRFFLVPGTHVAANPQVDREGHVVP 429
V A +FS NS L++T+V K+ ++ FFL G +V G P
Sbjct: 365 VSAQIFSANSVLYVTQVQKQSTQKDKEVQPNQLKLNNFFLQHGLNVLTEGTYSERGE--P 422
Query: 430 GFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDVFRYV 489
F G P + GG ++ HLA SP LA++ +YL+ +V + ++ +Y+
Sbjct: 423 AFRGFPMSDQAGG--QYTIHHLAYAASLSPHHLARVCYYLQFIHHQTLVTNKSYNIAQYI 480
Query: 490 A 490
+
Sbjct: 481 S 481
>gi|9625742|ref|NP_039991.1| UL57 [Human herpesvirus 5]
gi|118745|sp|P17147|DNBI_HCMVA Major DNA-binding protein (MDBP)
gi|74046|pir||QQBEW4 DNA-binding protein - human cytomegalovirus
(strain AD169)
gi|1780835|emb|CAA35372.1| HCMVUL57 [Human herpesvirus 5]
gi|27808792|tpg|DAA00162.1| TPA: UL57 [Human herpesvirus 5]
Length = 1235
Score = 99.4 bits (246), Expect = 4e-19
Identities = 130/572 (22%), Positives = 207/572 (35%), Gaps = 60/572 (10%)
Query: 10 TIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVV 69
T P GP ++Y +E E+LA LS S V +APL+ GLTVE+ F +V
Sbjct: 7 TALAPVGPAAFLYFSRLNAETQEILATLSLCDRSSSVVIAPLLAGLTVEADFGVSV---- 62
Query: 70 GSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYT 129
RT L L S ++Y H + + ++ RLCE AR+ + Y
Sbjct: 63 --RTPVLCYDGGVLTKVTSFCPFALYFHHTQGIVAFTEDHGDVHRLCEDARQKYALEAYM 120
Query: 130 PRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGA 189
P + T ALC +G +++VV G KE + + + V + G
Sbjct: 121 PEAD--RVPTDLAALCAAVGCQASETTVHVVVGNGLKEFLFAGQLIPCVEEATTVRLHGG 178
Query: 190 EVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAA 249
E R+P+YP LF A+ + + RS F + ++ LF V
Sbjct: 179 EAVRVPLYPPTLFNSLQLDAEADEVSLDARS---AFVEARGLYVPAVSETLFYYVYTSWC 235
Query: 250 VALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGGRDGGGKGAAGG 309
+LR + AA ++ + L K G
Sbjct: 236 QSLRFSEPRVLIEAALRQFVHDSQQSVKLAPH----------------------KRYLGY 273
Query: 310 FEQRLAS-----VMAGDAALALESIVSMAVFDE---PPTD---ISAWPLFEGQDTAAARA 358
QRL+S +M DA + + +VF + P + S WPL
Sbjct: 274 MSQRLSSLEKDHLMLSDAVVCELAFSFASVFFDSAYQPAESMLFSEWPLVTNATDHRDLI 333
Query: 359 NAVGAYLARAAGLVGAMVFSTNSALH-----LTEVDDAGPADPKDHSKPSFYRFFLVPGT 413
A+ + V A+VFS NS L+ + P+ S+ + +
Sbjct: 334 RALTELKLHLSTHVAALVFSANSVLYQHRLVYLQSSARHPSAGGTASQETLLKAIQFTNG 393
Query: 414 HVAANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCD 473
AA V + V F+G P + + +HLA++CG P L++ ++YL R
Sbjct: 394 LSAACEDVYNDARKVLKFQGAPLK-----DERYGPQHLALVCGTCPQLVSGFVWYLNRVS 448
Query: 474 --GAVIVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARG 531
+ G + + C C H C T +R+R R P +
Sbjct: 449 VYNTGLSGSSTLTNHLVGCAAGL----CEACGGTCCHTCYQTAFVRVRTRLPVVPKQPKK 504
Query: 532 AIGVFGTMNSMYSDCDVLGNYAAFSALKRADG 563
V + +D D+LG++ + DG
Sbjct: 505 EPCVITVQSRFLNDVDILGSFGRRYNVDAKDG 536
Score = 57.4 bits (137), Expect = 2e-06
Identities = 86/372 (23%), Positives = 142/372 (38%), Gaps = 35/372 (9%)
Query: 644 RDGLGEANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQ----SVE 699
RD + A A +L L+PYA PLL RS V Q++AL ++
Sbjct: 658 RDEVAGATQAFNLDLNPYAVAFQPLLAYAYFRSVFYVIQNVALITATSYIVDNPLTTNLV 717
Query: 700 GRNFRNQFQPVLRRRVMDMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGD 759
+ FQ + GFL K + + + Q A E
Sbjct: 718 SKWMTQHFQSIHGAFSTTSSRKGFLFTKQIKSSKNSDHDRLLDFRLYAQGTYAVVPMEIK 777
Query: 760 VARVTLGFPKELRVKSRVLFAGASANASEAAKARVASLQSAYQKPD--KRVDILLGPLGF 817
++R+++ +RVK+R ++ NA S + + D R + G LGF
Sbjct: 778 LSRLSVPTLIMVRVKNRPIYRAGKGNAG-----------SVFFRRDHVPRRNPAKGCLGF 826
Query: 818 LLKQFHAAIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIK---KFSLD 874
LL + H +FP P FW + N LP + + E AF+K + D
Sbjct: 827 LLYRHHERLFPECGLPCLQ------FWQKVCSNALPKNVPIGDMGEFNAFVKFLVAVTAD 880
Query: 875 YGAINFINLAPNNVSELAMYYMANQILRYCDHSTYF--INTLTAIIAGSRR---PPSVQA 929
Y + +++AP+ V N+ L Y Y ++ LT + P + A
Sbjct: 881 YQEHDLLDVAPDCVLSYVESRFHNKFLCYYGFKDYIGSLHGLTTRLTTQNHAQFPHVLGA 940
Query: 930 AAAWSAQGGAGLEAGARALMDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYY 989
+ +S+ L + L A P + A +L+R V R +V + +S+ KY
Sbjct: 941 SPRFSSPAEFALH--VKGLKTA--GVPAPMAATVARESLVRSVFEHRSLVTVPVSVEKYA 996
Query: 990 GMAGNDRVFQAG 1001
G+ + ++Q G
Sbjct: 997 GINNSKEIYQFG 1008
>gi|2959355|emb|CAA12265.1| UL29 [Feline herpesvirus 1]
Length = 84
Score = 86.7 bits (213), Expect = 2e-15
Identities = 48/85 (56%), Positives = 59/85 (68%), Gaps = 3/85 (3%)
Query: 1 METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESG 60
ME+ PKT I + GPLGY+YA S I L +LSARS DSD+AV PL+ GLTVE+G
Sbjct: 1 MESAPKT---ISLQAGPLGYIYACRSDSLQIPELGILSARSSDSDLAVVPLIQGLTVETG 57
Query: 61 FEANVAVVVGSRTTGLGGTAVSLKL 85
F NVAV+ GS+T+GL G +S KL
Sbjct: 58 FIHNVAVLSGSKTSGLSGHGISYKL 82
>gi|9845349|ref|NP_064163.1| pR57 [Rat cytomegalovirus]
gi|1255111|gb|AAC56430.1| pR57 [rat cytomegalovirus Maastricht]
Length = 1281
Score = 81.3 bits (199), Expect = 1e-13
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 14 PPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGSRT 73
P ++Y E E+L++LS + V V+PL++ LTV+ F V +
Sbjct: 11 PVAAAAWLYLVRRDREAGEVLSVLSLCDRECPVVVSPLLIDLTVDREFVGTVRTPMSCCD 70
Query: 74 TGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAP-NLTRLCERARRHFGFSDYTPRP 132
G+ S + V++F+G + S + ++ RLCE +RR FG + PR
Sbjct: 71 DGVLTRVTS-------FCPFVFLFYGTEDVLSSVEDHGDVRRLCEESRRRFGVRPFAPRR 123
Query: 133 GDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLGGSDKVTIGGAEVH 192
+ T ALC RL LDP+R L Y+ G KE + L + V I E
Sbjct: 124 D--REPTDVAALCRRLHLDPERTLGYVACGNGLKEMLYAGQLVPCLEEAVSVQIRSREGF 181
Query: 193 RIPVYPLQLFMPDFSR 208
++P+YP LF+PD R
Sbjct: 182 KVPLYPATLFVPDGGR 197
>gi|1000719|gb|AAC54477.1| major ssDNA-binding protein
Length = 178
Score = 63.5 bits (153), Expect = 2e-08
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 12 KVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGS 71
K P GP G++Y + ++LL + ++ PL+ G+TVE F NV V
Sbjct: 18 KAPIGPCGFIYIYPETHFNFKEISLLGDKYAEAGAFSLPLLHGVTVEEAFVPNVKAVYKK 77
Query: 72 RTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPR 131
+ T VS+KL S + + +FH + P L LC+ A FG+ +TP
Sbjct: 78 ----IDMTTVSVKL--STFYNRAIIFHNVEKFESIFSGPGLGSLCKEACDLFGYVPFTPL 131
Query: 132 PGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINNTFLHLG 179
+ T +C + + D A++ +V+TEGFKE LHLG
Sbjct: 132 G---EGSTDVSDICPPVWQEKD-AIMAVVITEGFKER-------LHLG 168
Database: nr
Posted date: Aug 27, 2003 10:37 AM
Number of letters in database: 485,782,529
Number of sequences in database: 1,508,275
Lambda K H
0.320 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,170,004,482
Number of Sequences: 1508275
Number of extensions: 51206956
Number of successful extensions: 136124
Number of sequences better than 1.0e-04: 59
Number of HSP's better than 0.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 135687
Number of HSP's gapped (non-prelim): 107
length of query: 1196
length of database: 485,782,529
effective HSP length: 135
effective length of query: 1061
effective length of database: 282,165,404
effective search space: 299377493644
effective search space used: 299377493644
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 122 (51.6 bits)