Transcription-factor-IIA-S (TfIIA-S)

Restricted Expression:

gonad [show more like this]

embryo [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

cDNA Sources:

gonad; uncharacterized tissue; blood; mixed; whole body; head; ovary

NCBI

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Finding cDNAs

UGID:100106 UniGene Dm.20591 Drosophila melanogaster (fruit fly) TfIIA-S

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Transcription-factor-IIA-S (TfIIA-S)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_524467.1	Transcription-factor-IIA-S CG5163-PA	D. melanogaster	100.0	105
NP_001034608.1	general transcription factor II A, 2	M. musculus	79.4	102
NP_004483.1	general transcription factor IIA, 2, 12kDa	H. sapiens	79.4	102
NP_001018441.1	general transcription factor IIA, 2	D. rerio	78.4	102
NP_001080922.1	transcription factor IIA small subunit	X. laevis	78.4	102
NP_194175.1	transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S)	A. thaliana	53.0	100
XP_330398.1	hypothetical protein	N. crassa	51.4	107
NP_499644.1	Y111B2A.13	C. elegans	49.0	102

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	3R
	Map position:	95C8-95C8

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_079743.2	Drosophila melanogaster Transcription-factor-IIA-S CG5163-RA (TfIIA-S), mRNA	P
AY113478.1	Drosophila melanogaster RE44302 full insert cDNA	PA
BT044069.1	Drosophila melanogaster FI01012 full insert cDNA	PA

EST sequences (10 of 55) [Show all sequences]

AI063405.1	Clone GH03194	head	5' read	PA
AA951021.1	Clone LD31265	whole body	5' read	PA
BI357748.1	Clone RE44302	whole body	5' read	P
BI632002.1	Clone RH56668	head	5' read	PA
AA695560.1	Clone GM03032	ovary	5' read	P
CO274046.1	Clone EK112950	mixed	5' read	P
CO306660.1	Clone EK251724	mixed	5' read	P
CO322110.1	Clone EK187238	mixed	5' read	P
CO337737.1	Clone EN15207	blood	5' read	PA
EC198821.1	Clone 31591	uncharacterized tissue

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria