| Submitted SNP(ss) Report in Submission Format |
SNP: Handle|local_snp_id: SI_MHC_SNP | AL662789.11_15276_CT
NCBI Assay Id(ss#): ss12695830
Reference SNP Id(rs#): rs9270870
Batch Detail:
Submitter Handle: SI_MHC_SNP
Submitter Batch ID: 2003_09_10
Entry Date: Sep 10, 2003
Molecular type: Genomic
No. of Chromosomes sampled: 3
Synonym defined:
Organism: Homo sapiens
Population: Not submitted
Submitter Method ID: MHC_XM20030904
Citation:
1. The MHC haplotype project: A resource for HLA-linked association
studies
View citation details:[1]
SubSNP Detail:
NCBI Assay ID: ss12695830
Submitter SNP ID: AL662789.11_15276_CT
Synonyms:
LOCUSID: Not submitted
Submitter STS ID: Not submitted
STS Accession: Not submitted
GenBanK Accession: AL662789.11
Comment:
sequence: AL662842.3
position: 100078
quality: [40]
sequence: AL929581.5
position: 110701
quality: [40]
Gene Name:
Length: 801
Flanking Sequence Information:
5' Assay: AGAAGAGCAG GAGAGAGCTC CAGAAGACCC AAACATCCGG CGTCCAGAAG ATCTTTTGTA
ACTGGTAATT AAATTATGAA ATGAGGACTG GTGGGCATCA CTGAGAACAT GATTTGGGAG
CCGTTTAACC CCTTGTTCAC TAGTCAGTTC ATCCTCTTGT TTTCTACAAA AATGTAGTTA
TCTGCTTCTC ATAGGAGAAG CTGTTGTGGG AGCCACACAG GGTGGTAACA GTCAGCGGTA
ATTTGGTGAA AAGAATTTTG TAGAAGGGAT TGTCCCTCCT TCACGTATTT CCATATATAA
ATCCTCACAG TCAGAAAAAA TATTCTTAAT ATCTATCTCA TATCTTTTGC CGCACTTTAA
ATTCGGTAAA TTTTAACTGA GGATCCACCA TATGCATGTG
Observed: C/T
3' Assay: ACATACACAT GCAATCTAGG TGGGGATATT CAATCACAAA AGGTGTGTTC AGTGCTTCCT
TTGTGCAGAA GATTCTTCTA ATGCTGGGGA TACAAAGATT CACATGAATT AGATCCTACT
TTTAAGTAGA TCCTACACAG ACAAAAGAGC ACATTGTAAT GACAGACATA TAAAATTCAT
ATAAAAATGG ggccaggcat ggtggctcac gcctgtaatc ctagcacttt gggaggccga
ggcaggtgga tcacgaggtc aggagatgga gaccatccta gctaacatgg tgaaacctat
ctctactaaa aatagagtgg tggggcatgc ctgtagtccc agctactcgg gaggctgagg
caggagaatg tcgtgaaccc gggaggcgga ggttgcagAG
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Revised:
May 25, 2006 1:38 PM
.