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Genomic biology
Bos taurus
Canis familiaris
Danio rerio
Homo sapiens
Mus musculus
Rattus novegicus
Sus scrofa

UniSTS:20468 Links
A004O41
Bos taurus chromosome 27
Canis familiaris chromosome 16
Equus caballus chromosome 27
Homo sapiens chromosome 8
Macaca mulatta chromosome 8
Monodelphis domestica chromosome 1
Ornithorhynchus anatinus chromosome 5
Pan troglodytes chromosome 8
Sus scrofa chromosome 17

Found by e-PCR in sequences from Bos taurus, Canis familiaris, Homo sapiens, Pan troglodytes and Sus scrofa.

Primer InformationHelp

Forward primer:ATTAATAGCAGGTACTGAAATG
Reverse primer:ACGATAAATAAAAAGGGG
PCR product size:187 (bp), Homo sapiens

   Bos taurus
Name: A004O41
Polymorphism info:  
Mapping InformationHelp
A004O41 Sequence Map: Chr 27 Map Viewer
  Position: 38954661-38954846 (bp)

Electronic PCR results Help
Genomic (1)
CM000203.3 38954661 .. 38954846 (186 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (2)
AC164445.2 184250 .. 184435 (186 bp)  
AC169414.3 100059 .. 100244 (186 bp)  
 
Whole Genome Shotgun sequences (1)
AAFC03025384.1 42760 .. 42945 (186 bp)  
 

   Canis familiaris
Name: A004O41
Polymorphism info:  
Mapping InformationHelp
A004O41 Sequence Map: Chr 16 Map Viewer
  Position: 26941536-26941724 (bp)

Electronic PCR results Help
Genomic (1)
CM000016.2 26941536 .. 26941724 (189 bp)  
 
ESTs (4)
CO584670.1 56 .. 244 (189 bp)  
CO614543.1 59 .. 247 (189 bp)  
CO684925.1 58 .. 247 (190 bp)  
CO699506.1 61 .. 249 (189 bp)  
 
Whole Genome Shotgun sequences (2)
AACN010409731.1 236 .. 424 (189 bp)  
AAEX02009365.1 107110 .. 107298 (189 bp)  
 

   Equus caballus
Name: A004O41
Polymorphism info:  
Mapping InformationHelp
A004O41 Sequence Map: Chr 27 Map Viewer
  Position: 3737956-3738142 (bp)

   Homo sapiens
Name: A004O41
Also known as:
Polymorphism info:  

Cross References Help
UniGeneHs.657014 Transcribed locus

Mapping InformationHelp
A004O41 Sequence Map: Chr 8|HuRef Map Viewer
  Position: 40010167-40010353 (bp)
 
A004O41 Sequence Map: Chr 8|Celera Map Viewer
  Position: 40431202-40431388 (bp)
 
A004O41 Sequence Map: Chr 8 Map Viewer
  Position: 41601439-41601625 (bp)
 
A004O41 NCBI RH Map: Chr 8 Map Viewer
  Position: 583.2 (cR)
  Lod score: 1.11
 
A004O41 GeneMap99-GB4 Map: Chr 8 Map Viewer
  Position: 174.10 (cR3000)
  Lod score: 0.09
  Reference Interval: D8S505-D8S519

Electronic PCR results Help
Genomic (5 of 7)[Show All Hits]
AC009630.14 23676 .. 23862 (187 bp)  
CH003455.1 40138374 .. 40138560 (187 bp)  
CH003503.1 48701726 .. 48701912 (187 bp)  
CH471080.2 28999040 .. 28999226 (187 bp)  
CM000259.1 40431202 .. 40431388 (187 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (3)
AC024027.3 101808 .. 101994 (187 bp)  
AC015649.6 20208 .. 20394 (187 bp)  
AF205590.4 7319 .. 7505 (187 bp)  
 
Low-pass Sequence Sampling (from GenBank HTGS division) (1)
AC087271.1 35587 .. 35773 (187 bp)  
 
ESTs (5 of 13)[Show All Hits]
R48325.1 46 .. 232 (187 bp)  
R53616.1 45 .. 231 (187 bp)  
AA347732.1 49 .. 235 (187 bp)  
AA579588.1 62 .. 248 (187 bp)  
AI167453.1 57 .. 242 (186 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01090656.1 8502 .. 8688 (187 bp)  
AADC01075401.1 21905 .. 22091 (187 bp)  
AADB02011353.1 278199 .. 278385 (187 bp)  
ABBA01021135.1 58954 .. 59140 (187 bp)  
 

   Macaca mulatta
Name: A004O41
Polymorphism info:  
Mapping InformationHelp
A004O41 Sequence Map: Chr 8 Map Viewer
  Position: 42181540-42181726 (bp)

   Monodelphis domestica
Name: A004O41
Polymorphism info:  
Mapping InformationHelp
A004O41 Sequence Map: Chr 1 Map Viewer
  Position: 576933642-576933826 (bp)

   Ornithorhynchus anatinus
Name: A004O41
Polymorphism info:  
Mapping InformationHelp
A004O41 Sequence Map: Chr 5 Map Viewer
  Position: 6474888-6475072 (bp)

   Pan troglodytes
Name: A004O41
Polymorphism info:  
Mapping InformationHelp
A004O41 Sequence Map: Chr 8 Map Viewer
  Position: 38376142-38376328 (bp)

Electronic PCR results Help
Genomic (1)
CM000322.2 38376142 .. 38376328 (187 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01053890.1 16281 .. 16467 (187 bp)  
AACZ02094208.1 1907 .. 2093 (187 bp)  
 

   Sus scrofa
Name: A004O41
Polymorphism info:  

Cross References Help
UniGeneSsc.26313 Transcribed locus

Mapping InformationHelp
A004O41 Sequence Map: Chr 17 Map Viewer
  Position: 5117123-5117314 (bp)

Electronic PCR results Help
Working Draft phase 1 (from GenBank HTGS division) (2)
CU606939.1 71399 .. 71590 (192 bp)  
CU607010.1 104509 .. 104700 (192 bp)  
 
ESTs (1)
DY436445.1 55 .. 246 (192 bp)  
 

 

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