Xeroderma pigmentosum, complementation group A (Xpa)

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Finding cDNAs

UGID:333682 UniGene Mm.247036 Mus musculus (mouse) Xpa

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Xeroderma pigmentosum, complementation group A (Xpa)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_035858.1	xeroderma pigmentosum, complementation group A	M. musculus	100.0	271
NP_000371.1	xeroderma pigmentosum, complementation group A	H. sapiens	90.9	264
NP_001081354.1	xpacx1 protein	X. laevis	74.1	265
NP_956765.1	xeroderma pigmentosum, complementation group A	D. rerio	62.1	285
NP_492025.1	human XPA (Xeroderma pigmentosum comp grp A) related family member (xpa-1)	C. elegans	52.0	170
NP_476866.1	xeroderma pigmentosum group A-like	D. melanogaster	51.5	292

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	embryonic tissue; mixed; brain; tongue; uncharacterized tissue; testis; mammary gland; eye; bone marrow; thyroid; pancreas; kidney; thymus; pineal gland; lung; pituitary gland; skin; dorsal root ganglion; extraembryonic tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	4
Map position:	4 C2\|4 21.5 cM
UniSTS entry:	Chr X	(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AK051490.1	Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130052F04 product:unclassifiable, full insert sequence
AK008962.1	Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210417B19 product:xeroderma pigmentosum, complementation group A, full insert sequence	P
AK133577.1	Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330407G24 product:xeroderma pigmentosum, complementation group A, full insert sequence	P
AK133158.1	Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4931406D24 product:unclassifiable, full insert sequence
X74351.1	M.musculus mRNA for XPAC Xeroderma Pigmentosum group A Correcting protein	P
NM_011728.1	Mus musculus xeroderma pigmentosum, complementation group A (Xpa), mRNA	P
AF354052.1	Mus musculus xeroderma pigmentosum complementation group A mRNA, complete cds	P
BC029241.1	Mus musculus xeroderma pigmentosum, complementation group A, mRNA (cDNA clone MGC:36016 IMAGE:4489063), complete cds	PA

EST sequences (10 of 81) [Show all sequences]

BY047520.1	Clone I730046J09	mixed	5' read	P
BY518555.1	Clone C920025G13	thymus	3' read	A
CA873367.1	Clone NIA:K0924F07_IMAGE:30086562	uncharacterized tissue	3' read
CA984292.1	Clone IMAGE:30147874	embryonic tissue	5' read	PM
CB058423.1	Clone IMAGE:5023825	pituitary gland	5' read	P
CD349938.1	Clone IMAGE:6851236	brain	5' read
BX523627.1	Clone IMAGp998H111127_;_IMAGE:475066	embryonic tissue
BX524446.1	Clone IMAGp998N154678_;_IMAGE:1908302	kidney
CF182443.1	Clone IMAGE:_5704473	brain	5' read
BX635970.1	Clone LIONp462E10408	uncharacterized tissue	3' read	PA

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria