BLASTP 2.2.4 [Aug-26-2002]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SAG0864
         (137 letters)

Database: nr 
           1,487,057 sequences; 479,114,161 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22537027|ref|NP_687878.1| ATP synthase F1, epsilon subunit [S...   236   5e-62
gi|25010937|ref|NP_735332.1| H+-transporting ATP synthase epsilo...   233   3e-61
gi|20137263|sp|O50160|ATPE_STRBO ATP synthase epsilon chain (ATP...   182   6e-46
gi|15674809|ref|NP_268983.1| putative proton-translocating ATPas...   178   1e-44
gi|19745848|ref|NP_606984.1| putative proton-translocating ATPas...   177   3e-44
gi|24379916|ref|NP_721871.1| FoF1 membrane-bound proton-transloc...   166   8e-41
gi|15901354|ref|NP_345958.1| ATP synthase F1, epsilon subunit [S...   155   1e-37
gi|20137593|sp|Q9ZJ00|ATPE_STRSA ATP synthase epsilon chain (ATP...   149   1e-35
gi|29377092|ref|NP_816246.1| ATP synthase F1, epsilon subunit [E...   139   8e-33
gi|22991791|ref|ZP_00036482.1| hypothetical protein [Enterococcu...   138   2e-32
gi|1168589|sp|P43453|ATPE_ENTHR ATP synthase epsilon chain (ATP ...   136   6e-32
gi|20137550|sp|Q9RAT9|ATPE_LACLC ATP synthase epsilon chain (ATP...   133   4e-31
gi|15673745|ref|NP_267919.1| ATP synthase epsilon subunit [Lacto...   133   5e-31
gi|16804566|ref|NP_466051.1| highly similar to H+-transporting A...   115   2e-25
gi|23002571|ref|ZP_00046246.1| hypothetical protein [Lactobacill...   114   2e-25
gi|16801733|ref|NP_472001.1| highly similar to H+-transporting A...   114   4e-25
gi|8671464|dbj|BAA96810.1| FoF1-ATP synthase epsilon subunit [th...   112   1e-24
gi|15616315|ref|NP_244620.1| ATP synthase epsilon subunit [Bacil...   112   1e-24
gi|20137553|sp|Q9RGY0|ATPE_LACAC ATP synthase epsilon chain (ATP...   111   3e-24
gi|14916963|sp|P22480|ATPE_BACFI ATP synthase epsilon chain (ATP...   109   7e-24
gi|28378937|ref|NP_785829.1| H(+)-transporting two-sector ATPase...   109   9e-24
gi|30023336|ref|NP_834967.1| ATP synthase epsilon chain [Bacillu...   105   1e-22
gi|21397776|ref|NP_653761.1| ATP-synt_DE_N, ATP synthase, Delta/...   104   2e-22
gi|80097|pir||S17727 H+-transporting two-sector ATPase (EC 3.6.3...   103   4e-22
gi|23100429|ref|NP_693896.1| H(+)-transporting ATP synthase epsi...   102   2e-21
gi|728926|sp|P41012|ATPE_BACCA ATP synthase epsilon chain (ATP s...   100   4e-21
gi|114609|sp|P07678|ATPE_BACP3 ATP synthase epsilon chain (ATP s...   100   5e-21
gi|114593|sp|P12699|ATPE_BACME ATP synthase epsilon chain (ATP s...   100   5e-21
gi|1168588|sp|P42009|ATPE_BACST ATP synthase epsilon chain (ATP ...   100   7e-21
gi|16080733|ref|NP_391561.1| ATP synthase (subunit epsilon) [Bac...   100   8e-21
gi|23023844|ref|ZP_00063073.1| hypothetical protein [Leuconostoc...    91   3e-18
gi|23037515|ref|ZP_00069723.1| hypothetical protein [Oenococcus ...    84   4e-16
gi|15925092|ref|NP_372626.1| FoF1-ATP synthase epsilon subunit [...    81   2e-15
gi|20137564|sp|Q9S5B5|ATPE_DESVM ATP synthase epsilon chain (ATP...    81   3e-15
gi|25290499|pir||C90003 FoF1-ATP synthase epsilon subunit [impor...    80   4e-15
gi|23114963|ref|ZP_00100240.1| hypothetical protein [Desulfitoba...    80   8e-15
gi|20070094|gb|AAM01191.1| H+-ATPase cytoplasmic F1-part epsilon...    79   1e-14
gi|27468617|ref|NP_765254.1| FoF1-ATP synthase epsilon subunit [...    75   1e-13
gi|23039555|ref|ZP_00071113.1| hypothetical protein [Trichodesmi...    75   2e-13
gi|20137262|sp|O50143|ATPE_RUMAL ATP synthase epsilon chain (ATP...    75   3e-13
gi|15896118|ref|NP_349467.1| FoF1-type ATP synthase epsilon subu...    71   3e-12
gi|29565618|ref|NP_817197.1| H+-ATPase epsilon subunit [Pinus ko...    70   5e-12
gi|20807131|ref|NP_622302.1| F0F1-type ATP synthase epsilon subu...    70   8e-12
gi|15828736|ref|NP_326096.1| ATP SYNTHASE EPSILON CHAIN [Mycopla...    69   2e-11
gi|23054146|ref|ZP_00080313.1| hypothetical protein [Geobacter m...    68   3e-11
gi|23125400|ref|ZP_00107335.1| hypothetical protein [Nostoc punc...    67   4e-11
gi|22266800|gb|AAM94914.1|AF522463_9 subunit epsilon [Ilyobacter...    66   8e-11
gi|231604|sp|P29709|ATPE_PROMO ATP synthase epsilon chain, sodiu...    66   1e-10
gi|33241041|ref|NP_875983.1| ATP synthase epsilon subunit [Proch...    66   1e-10
gi|22982098|ref|ZP_00027408.1| hypothetical protein [Burkholderi...    65   2e-10
gi|31455366|emb|CAD37195.1| ATP synthase epsilon chain [Oenococc...    65   2e-10
gi|3913117|sp|O47036|ATPE_PICAB ATP synthase epsilon chain (ATP ...    65   2e-10
gi|17232530|ref|NP_489078.1| ATP synthase epsilon subunit [Nosto...    64   3e-10
gi|16330680|ref|NP_441408.1| ATP synthase e subunit [Synechocyst...    64   4e-10
gi|21223734|ref|NP_629513.1| ATP synthase epsilon chain [Strepto...    64   4e-10
gi|22980667|ref|ZP_00026370.1| hypothetical protein [Ralstonia m...    63   9e-10
gi|24298791|dbj|BAC22106.1| F-ATPase epsilon-subunit [Thermotoga...    62   1e-09
gi|22797515|emb|CAD23920.1| ATP synthase epsilon subunit [Styrax...    62   1e-09
gi|23133128|ref|ZP_00114902.1| hypothetical protein [Synechococc...    62   1e-09
gi|32480849|ref|NP_862760.1| ATPase epsilon subunit [Calycanthus...    62   1e-09
gi|23131956|ref|ZP_00113741.1| hypothetical protein [Prochloroco...    62   1e-09
gi|22796292|emb|CAD23957.1| ATP synthase epsilon subunit [Globul...    62   2e-09
gi|22797533|emb|CAD23953.1| ATP synthase epsilon subunit [Paulow...    62   2e-09
gi|22797157|emb|CAD23138.1| ATP synthase epsilon subunit [Melano...    62   2e-09
gi|22797135|emb|CAD23915.1| ATP synthase epsilon subunit [Manilk...    62   2e-09
gi|79754|pir||B26926 H+-transporting two-sector ATPase (EC 3.6.3...    61   3e-09
gi|114595|sp|P07891|ATPE_CHLRE ATP synthase epsilon chain (ATP s...    61   3e-09
gi|22797145|emb|CAD23961.1| ATP synthase epsilon subunit [Myopor...    61   3e-09
gi|22795923|emb|CAD23960.1| ATP synthase epsilon subunit [Buddle...    61   3e-09
gi|114607|sp|P07892|ATPE_SYNP7 ATP synthase epsilon chain (ATP s...    61   3e-09
gi|22795905|emb|CAD23924.1| ATP synthase epsilon subunit [Camell...    61   3e-09
gi|22795921|emb|CAD23956.1| ATP synthase epsilon subunit [Antirr...    61   3e-09
gi|22796633|emb|CAD24000.1| ATP synthase epsilon subunit [Lonice...    61   4e-09
gi|22797137|emb|CAD23933.1| ATP synthase epsilon subunit [Plocos...    61   4e-09
gi|17548033|ref|NP_521435.1| PROBABLE ATP SYNTHASE EPSILON CHAIN...    61   4e-09
gi|29829422|ref|NP_824056.1| putative ATP synthase epsilon chain...    61   4e-09
gi|22797501|emb|CAD23911.1| ATP synthase epsilon subunit [Pentap...    61   4e-09
gi|22797523|emb|CAD23932.1| ATP synthase epsilon subunit [Pyrena...    60   4e-09
gi|22796607|emb|CAD23931.1| ATP synthase epsilon subunit [Icacin...    60   4e-09
gi|114608|sp|P26533|ATPE_SYNY3 ATP synthase epsilon chain (ATP s...    60   4e-09
gi|22795887|emb|CAD22403.1| ATP synthase epsilon chain [Clethra ...    60   4e-09
gi|336669|gb|AAA84147.1| CF1/CF0 ATPase epsilon subunit >gnl|BL_...    60   5e-09
gi|7524660|ref|NP_042414.1| ATP synthase CF1 epsilon chain [Pinu...    60   5e-09
gi|22796603|emb|CAD23910.1| ATP synthase epsilon subunit [Myrsin...    60   5e-09
gi|22797840|emb|CAD23137.1| ATP synthase epsilon subunit [Tetrac...    60   5e-09
gi|22797513|emb|CAD23919.1| ATP synthase epsilon subunit [Pteros...    60   5e-09
gi|22795891|emb|CAD22410.1| ATP synthase epsilon chain [Byblis l...    60   6e-09
gi|22795899|emb|CAD23905.1| ATP synthase epsilon subunit [Diospy...    60   6e-09
gi|22796631|emb|CAD23990.1| ATP synthase epsilon subunit [Helian...    60   6e-09
gi|22795925|emb|CAD23970.1| ATP synthase epsilon subunit [Brunia...    60   6e-09
gi|22797497|emb|CAD22409.1| ATP synthase epsilon chain [Stilbe e...    60   7e-09
gi|22797527|emb|CAD23946.1| ATP synthase epsilon subunit [Dipent...    60   7e-09
gi|19703699|ref|NP_603261.1| ATP synthase epsilon chain, sodium ...    60   7e-09
gi|22795943|emb|CAD23991.1| ATP synthase epsilon subunit [Acicar...    60   7e-09
gi|22796635|emb|CAD24003.1| ATP synthase epsilon subunit [Linnae...    60   7e-09
gi|22796601|emb|CAD23908.1| ATP synthase epsilon subunit [Lissoc...    60   7e-09
gi|728927|sp|P41171|ATPE_THIFE ATP synthase epsilon chain (ATP s...    60   8e-09
gi|13518422|ref|NP_084782.1| ATP synthase CF1 epsilon chain [Lot...    60   9e-09
gi|22797535|emb|CAD23954.1| ATP synthase epsilon subunit [Sesamu...    60   9e-09
gi|22797509|emb|CAD23916.1| ATP synthase epsilon subunit [Sarrac...    60   9e-09
gi|22796617|emb|CAD23952.1| ATP synthase epsilon subunit [Linden...    60   9e-09
gi|22797529|emb|CAD23947.1| ATP synthase epsilon subunit [Strept...    60   9e-09
gi|22797539|emb|CAD23959.1| ATP synthase epsilon subunit [Schleg...    60   9e-09
gi|22796629|emb|CAD23986.1| ATP synthase epsilon subunit [Helwin...    59   9e-09
gi|22796625|emb|CAD23969.1| ATP synthase epsilon subunit [Montin...    59   1e-08
gi|22796615|emb|CAD23948.1| ATP synthase epsilon subunit [Lamium...    59   1e-08
gi|32490758|ref|NP_871012.1| atpC [Wigglesworthia glossinidia en...    59   1e-08
gi|22797543|emb|CAD23963.1| ATP synthase epsilon subunit [Polypr...    59   1e-08
gi|21244373|ref|NP_643955.1| ATP synthase epsilon chain [Xanthom...    59   1e-08
gi|22797568|emb|CAD23136.1| ATP synthase epsilon subunit [Probos...    59   1e-08
gi|22795907|emb|CAD23927.1| ATP synthase epsilon subunit [Borago...    59   1e-08
gi|22797141|emb|CAD23950.1| ATP synthase epsilon subunit [Olea e...    59   1e-08
gi|22797537|emb|CAD23955.1| ATP synthase epsilon subunit [Phryma...    59   1e-08
gi|22795949|emb|CAD24002.1| ATP synthase epsilon subunit [Dipsac...    59   1e-08
gi|22797830|emb|CAD23964.1| ATP synthase epsilon subunit [Verben...    59   1e-08
gi|23123255|ref|ZP_00105390.1| hypothetical protein [Prochloroco...    59   2e-08
gi|22796637|emb|CAD24004.1| ATP synthase epsilon subunit [Morina...    59   2e-08
gi|22797139|emb|CAD23936.1| ATP synthase epsilon subunit [Oncoth...    59   2e-08
gi|21230030|ref|NP_635947.1| ATP synthase epsilon chain [Xanthom...    59   2e-08
gi|22795947|emb|CAD24001.1| ATP synthase epsilon subunit [Diervi...    59   2e-08
gi|1703741|sp|P50010|ATPE_PRODI ATP synthase epsilon chain (ATP ...    59   2e-08
gi|22795491|emb|CAD22407.1| ATP synthase epsilon chain [Androya ...    59   2e-08
gi|22796611|emb|CAD23941.1| ATP synthase epsilon subunit [Luculi...    59   2e-08
gi|22711897|ref|NP_683809.1| ATP synthase CF1 epsilon chain [Cha...    59   2e-08
gi|22797147|emb|CAD23976.1| ATP synthase epsilon subunit [Paracr...    58   2e-08
gi|22796595|emb|CAD23901.1| ATP synthase epsilon subunit [Hydran...    58   2e-08
gi|17367084|sp|Q9TKI6|ATPE_MEDSA ATP synthase epsilon chain (ATP...    58   2e-08
gi|22795919|emb|CAD23951.1| ATP synthase epsilon subunit [Cycloc...    58   2e-08
gi|22795933|emb|CAD23974.1| ATP synthase epsilon subunit [Escall...    58   2e-08
gi|22795497|emb|CAD23935.1| ATP synthase epsilon subunit [Aucuba...    58   2e-08
gi|22797557|emb|CAD23998.1| ATP synthase epsilon subunit [Stylid...    58   2e-08
gi|7524903|ref|NP_045905.1| ATP synthase CF1 epsilon chain [Chlo...    58   2e-08
gi|16762462|ref|NP_458079.1| ATP synthase epsilon subunit [Salmo...    58   2e-08
gi|22795897|emb|CAD23899.1| ATP synthase epsilon subunit [Cornus...    58   2e-08
gi|22795493|emb|CAD23903.1| ATP synthase epsilon subunit [Actini...    58   2e-08
gi|22796627|emb|CAD23985.1| ATP synthase epsilon subunit [Ilex s...    58   2e-08
gi|22795917|emb|CAD23943.1| ATP synthase epsilon subunit [Avicen...    58   2e-08
gi|22797149|emb|CAD23977.1| ATP synthase epsilon subunit [Polyos...    58   2e-08
gi|22796623|emb|CAD23968.1| ATP synthase epsilon subunit [Kaliph...    58   3e-08
gi|22797820|emb|CAD22405.1| ATP synthase epsilon chain [Tetramer...    58   3e-08
gi|30468213|ref|NP_849100.1| ATP synthase CF1 epsilon chain [Cya...    58   3e-08
gi|14715607|gb|AAK72444.1|AF283808_9 ATP synthase epsilon subuni...    58   3e-08
gi|22797143|emb|CAD23958.1| ATP synthase epsilon subunit [Planta...    58   3e-08
gi|11465963|ref|NP_054505.1| ATP synthase CF1 epsilon chain [Nic...    58   3e-08
gi|22796613|emb|CAD23944.1| ATP synthase epsilon subunit [Jacara...    58   3e-08
gi|18860317|ref|NP_569635.1| ATP synthase CF1 epsilon chain [Psi...    58   3e-08
gi|22797531|emb|CAD23949.1| ATP synthase epsilon subunit [Pingui...    58   3e-08
gi|22797517|emb|CAD23921.1| ATP synthase epsilon subunit [Symplo...    58   3e-08
gi|22797519|emb|CAD23923.1| ATP synthase epsilon subunit [Pellic...    58   3e-08
gi|22797133|emb|CAD23909.1| ATP synthase epsilon subunit [Marcgr...    58   3e-08
gi|22795889|emb|CAD22404.1| ATP synthase epsilon chain [Cyrilla ...    58   3e-08
gi|22796619|emb|CAD23965.1| ATP synthase epsilon subunit [Ipomoe...    57   4e-08
gi|114598|sp|P07138|ATPE_IPOBA ATP synthase epsilon chain (ATP s...    57   4e-08
gi|22797525|emb|CAD23945.1| ATP synthase epsilon subunit [Peltan...    57   4e-08
gi|22795941|emb|CAD23989.1| ATP synthase epsilon subunit [Argoph...    57   4e-08
gi|28195664|gb|AAO27798.1| ATP synthase epsilon subunit [Phoenix...    57   4e-08
gi|2914167|pdb|1AQT| Epsilon Subunit Of F1f0-Atp Synthase From ...    57   4e-08
gi|16131599|ref|NP_418187.1| membrane-bound ATP synthase, F1 sec...    57   4e-08
gi|30064964|ref|NP_839135.1| membrane-bound ATP synthase, F1 sec...    57   4e-08
gi|6729899|pdb|1BSH|A Chain A, Solution Structure Of The Epsilon...    57   4e-08
gi|11465726|ref|NP_053870.1| ATP synthase CF1 epsilon chain [Por...    57   4e-08
gi|29655230|ref|NP_820922.1| ATP synthase F1, epsilon subunit [C...    57   5e-08
gi|22796597|emb|CAD23902.1| ATP synthase epsilon subunit [Nasa t...    57   5e-08
gi|22797505|emb|CAD23913.1| ATP synthase epsilon subunit [Primul...    57   5e-08
gi|22797503|emb|CAD23912.1| ATP synthase epsilon subunit [Polemo...    57   6e-08
gi|6635347|gb|AAF19791.1|AF162208_1 ATPase epsilon chain [Lactuc...    57   6e-08
gi|22797521|emb|CAD23925.1| ATP synthase epsilon subunit [Schima...    57   6e-08
gi|28899842|ref|NP_799447.1| ATP synthase F1, epsilon subunit [V...    57   6e-08
gi|7525039|ref|NP_051065.1| ATP synthase CF1 epsilon chain [Arab...    57   6e-08
gi|22797838|emb|CAD24005.1| ATP synthase epsilon subunit [Valeri...    57   6e-08
gi|15804331|ref|NP_290370.1| membrane-bound ATP synthase, F1 sec...    57   7e-08
gi|22797153|emb|CAD23995.1| ATP synthase epsilon subunit [Pentap...    57   7e-08
gi|22795909|emb|CAD23928.1| ATP synthase epsilon subunit [Cardio...    57   7e-08
gi|41039|emb|CAA23528.1| unnamed protein product [Escherichia coli]    56   8e-08
gi|13518305|ref|NP_084664.1| ATP synthase CF1 epsilon chain [Oen...    56   8e-08
gi|7436143|pir||T09973 H+-transporting two-sector ATPase (EC 3.6...    56   8e-08
gi|22795929|emb|CAD23972.1| ATP synthase epsilon subunit [Desfon...    56   8e-08
gi|22795927|emb|CAD23971.1| ATP synthase epsilon subunit [Colume...    56   8e-08
gi|22795937|emb|CAD23981.1| ATP synthase epsilon subunit [Aralid...    56   9e-08
gi|22797832|emb|CAD23978.1| ATP synthase epsilon subunit [Tribel...    56   9e-08
gi|67870|pir||PWBHE H+-transporting two-sector ATPase (EC 3.6.3....    56   9e-08
gi|231602|sp|P30400|ATPE_CUSRE ATP synthase epsilon chain (ATP s...    56   9e-08
gi|14017578|ref|NP_114265.1| ATP synthase CF1 epsilon chain [Tri...    56   1e-07
gi|22795895|emb|CAD23897.1| ATP synthase epsilon subunit [Dipent...    56   1e-07
gi|22795913|emb|CAD23937.1| ATP synthase epsilon subunit [Alston...    56   1e-07
gi|15616639|ref|NP_239851.1| ATP synthase epsilon chain [Buchner...    56   1e-07
gi|22796294|emb|CAD23967.1| ATP synthase epsilon subunit [Grevea...    56   1e-07
gi|584814|sp|Q08808|ATPE_GALSU ATP synthase epsilon chain (ATP s...    56   1e-07
gi|227787|prf||1711264B CF1 ATPase:SUBUNIT=epsilon                     56   1e-07
gi|25027872|ref|NP_737926.1| H+-ATPase epsilon subunit [Coryneba...    56   1e-07
gi|15837744|ref|NP_298432.1| ATP synthase, epsilon chain [Xylell...    55   1e-07
gi|20137536|sp|Q9PE86|ATPE_XYLFA ATP synthase epsilon chain (ATP...    55   1e-07
gi|22796296|emb|CAD23982.1| ATP synthase epsilon subunit [Grisel...    55   2e-07
gi|22795911|emb|CAD23930.1| ATP synthase epsilon subunit [Cassin...    55   2e-07
gi|15827577|ref|NP_301840.1| ATP synthase [epsilon] chain [Mycob...    55   2e-07
gi|22796609|emb|CAD23940.1| ATP synthase epsilon subunit [Logani...    55   2e-07
gi|22797499|emb|CAD22411.1| ATP synthase epsilon chain [Sphenocl...    55   2e-07
gi|22797826|emb|CAD23926.1| ATP synthase epsilon subunit [Theoph...    55   2e-07
gi|22795495|emb|CAD23929.1| ATP synthase epsilon subunit [Apodyt...    55   2e-07
gi|22795931|emb|CAD23973.1| ATP synthase epsilon subunit [Eremos...    55   2e-07
gi|22796599|emb|CAD23904.1| ATP synthase epsilon subunit [Impati...    55   2e-07
gi|22797822|emb|CAD23898.1| ATP synthase epsilon subunit [Vitis ...    55   2e-07
gi|11467198|ref|NP_043031.1| ATP synthase CF1 epsilon chain [Zea...    55   2e-07
gi|22797151|emb|CAD23994.1| ATP synthase epsilon subunit [Menyan...    55   2e-07
gi|20137566|sp|Q9TJR8|ATPE_PROWI ATP synthase epsilon chain (ATP...    55   2e-07
gi|21672303|ref|NP_660370.1| ATP synthase epsilon chain [Buchner...    55   2e-07
gi|22797507|emb|CAD23914.1| ATP synthase epsilon subunit [Roridu...    55   2e-07
gi|22797549|emb|CAD23987.1| ATP synthase epsilon subunit [Phyllo...    55   2e-07
gi|22795915|emb|CAD23942.1| ATP synthase epsilon subunit [Acanth...    55   2e-07
gi|22797828|emb|CAD23934.1| ATP synthase epsilon subunit [Vahlia...    55   2e-07
gi|15606086|ref|NP_213463.1| ATP synthase F1 epsilon subunit [Aq...    55   2e-07
gi|22796286|emb|CAD23900.1| ATP synthase epsilon subunit [Grubbi...    55   3e-07
gi|22795939|emb|CAD23988.1| ATP synthase epsilon subunit [Alseuo...    55   3e-07
gi|114591|sp|P09468|ATPE_ARATH ATP synthase epsilon chain (ATP s...    55   3e-07
gi|22797836|emb|CAD23999.1| ATP synthase epsilon subunit [Viburn...    55   3e-07
gi|24215475|ref|NP_712956.1| ATP synthase F1, epsilon subunit [L...    55   3e-07
gi|22795499|emb|CAD23979.1| ATP synthase epsilon subunit [Apium ...    54   3e-07
gi|461577|sp|Q05375|ATPE_SYNP1 ATP synthase epsilon chain (ATP s...    54   3e-07
gi|28261723|ref|NP_783238.1| ATPase epsilon subunit [Atropa bell...    54   3e-07
gi|15644357|ref|NP_229409.1| ATP synthase F1, subunit epsilon [T...    54   4e-07
gi|22797553|emb|CAD23996.1| ATP synthase epsilon subunit [Phelli...    54   4e-07
gi|15608451|ref|NP_215827.1| atpC [Mycobacterium tuberculosis H3...    54   4e-07
gi|11467385|ref|NP_043242.1| ATP synthase CF1 epsilon chain [Cya...    54   4e-07
gi|11497534|ref|NP_054942.1| ATP synthase CF1 epsilon chain [Spi...    54   4e-07
gi|32129413|sp|Q87E91|ATPE_XYLFT ATP synthase epsilon chain (ATP...    54   4e-07
gi|22993903|ref|ZP_00038440.1| hypothetical protein [Xylella fas...    54   4e-07
gi|22797551|emb|CAD23993.1| ATP synthase epsilon subunit [Scaevo...    54   4e-07
gi|15642756|ref|NP_232389.1| ATP synthase F1, epsilon subunit [V...    54   4e-07
gi|22795893|emb|CAD22412.1| ATP synthase epsilon chain [Carpodet...    54   5e-07
gi|27886882|gb|EAA24007.1| ATP synthase epsilon chain, sodium io...    54   5e-07
gi|22796290|emb|CAD23939.1| ATP synthase epsilon subunit [Gentia...    54   5e-07
gi|22997188|ref|ZP_00041423.1| hypothetical protein [Xylella fas...    54   6e-07
gi|19552436|ref|NP_600438.1| F0F1-type ATP synthase epsilon subu...    54   6e-07
gi|11466708|ref|NP_039304.1| ATP synthase CF1 epsilon chain [Mar...    54   7e-07
gi|11466793|ref|NP_039389.1| ATP synthase CF1 epsilon chain [Ory...    53   7e-07
gi|15677763|ref|NP_274927.1| ATP synthase F1, epsilon subunit [N...    53   7e-07
gi|23018729|ref|ZP_00058443.1| hypothetical protein [Thermobifid...    53   7e-07
gi|27904522|ref|NP_777648.1| ATP synthase epsilon chain [Buchner...    53   7e-07
gi|15793518|ref|NP_283340.1| ATP synthase epsilon chain [Neisser...    53   8e-07
gi|114603|sp|P26534|ATPE_PYLLI ATP synthase epsilon chain (ATP s...    53   8e-07
gi|19920170|gb|AAM08602.1|AC092750_36 Putative atpE; ATPase epsi...    53   8e-07
gi|22797547|emb|CAD23983.1| ATP synthase epsilon subunit [Pittos...    53   9e-07
gi|24376218|ref|NP_720262.1| ATP synthase F1, epsilon subunit [S...    53   1e-06
gi|22796605|emb|CAD23918.1| ATP synthase epsilon subunit [Halesi...    53   1e-06
gi|18311168|ref|NP_563102.1| ATP synthase epsilon subunit [Clost...    53   1e-06
gi|30352040|ref|NP_848066.1| ATP synthase CF1 epsilon chain [Adi...    53   1e-06
gi|32265929|ref|NP_859961.1| FoF1-type ATP synthase [Helicobacte...    52   1e-06
gi|22797564|emb|CAD22880.1| ATP synthase epsilon subunit [Paeoni...    52   1e-06
gi|18146852|dbj|BAB82485.1| F0F1-ATPase subunit epsilon [Colwell...    52   1e-06
gi|27364455|ref|NP_759983.1| ATP synthase F1, epsilon subunit [V...    52   1e-06
gi|11467697|ref|NP_050749.1| ATP synthase CF1 epsilon chain [Gui...    52   1e-06
gi|22797541|emb|CAD23962.1| ATP synthase epsilon subunit [Selago...    52   1e-06
gi|16124228|ref|NP_407541.1| ATP synthase epsilon subunit protei...    52   2e-06
gi|22795903|emb|CAD23907.1| ATP synthase epsilon subunit [Barrin...    52   2e-06
gi|20137253|sp|O05434|ATPE_MOOTH ATP synthase epsilon chain (ATP...    52   2e-06
gi|17549031|ref|NP_522371.1| PROBABLE ATP SYNTHASE EPSILON CHAIN...    52   2e-06
gi|33519492|ref|NP_878324.1| ATP synthase epsilon subunit [Candi...    52   2e-06
gi|22796621|emb|CAD23966.1| ATP synthase epsilon subunit [Hydrol...    52   2e-06
gi|114611|sp|P12988|ATPE_VIBAL ATP synthase epsilon chain (ATP s...    51   3e-06
gi|16272425|ref|NP_438638.1| ATP synthase F1 subunit epsilon [Ha...    51   3e-06
gi|22298069|ref|NP_681316.1| ATP synthase epsilon subunit [Therm...    51   3e-06
gi|11466373|ref|NP_038376.1| ATP synthase CF1 epsilon chain [Mes...    51   3e-06
gi|28202178|ref|NP_777419.1| ATPase epsilon subunit [Anthoceros ...    51   4e-06
gi|22797495|emb|CAD22408.1| ATP synthase epsilon chain [Scrophul...    50   5e-06
gi|344015|dbj|BAA00335.1| ATP synthetase epsilon subunit [Oryza ...    50   5e-06
gi|22795935|emb|CAD23980.1| ATP synthase epsilon subunit [Aralia...    50   6e-06
gi|114602|sp|P05039|ATPE_PEA ATP synthase epsilon chain (ATP syn...    50   6e-06
gi|30248231|ref|NP_840301.1| ATP synthase, Delta/Epsilon chain [...    50   7e-06
gi|15645745|ref|NP_207922.1| ATP synthase F1, subunit epsilon (a...    50   7e-06
gi|9911061|sp|P56084|ATPE_HELPY ATP synthase epsilon chain (ATP ...    50   7e-06
gi|15612124|ref|NP_223776.1| ATP synthase F1, subunit epsilon [H...    50   8e-06
gi|11467033|ref|NP_041940.1| ATP synthase CF1 epsilon chain [Eug...    50   8e-06
gi|22797555|emb|CAD23997.1| ATP synthase epsilon subunit [Rousse...    50   9e-06
gi|26992087|ref|NP_747512.1| ATP synthase F1, epsilon subunit [P...    50   9e-06
gi|1703738|sp|P50009|ATPE_ACEWO ATP synthase epsilon chain, sodi...    49   2e-05
gi|7436136|pir||S71145 H+-transporting two-sector ATPase (EC 3.6...    49   2e-05
gi|22796288|emb|CAD23938.1| ATP synthase epsilon subunit [Gelsem...    48   2e-05
gi|23104636|ref|ZP_00091098.1| hypothetical protein [Azotobacter...    48   3e-05
gi|33151293|ref|NP_872646.1| ATP synthase epsilon chain [Haemoph...    48   3e-05
gi|11467560|ref|NP_043706.1| ATP synthase CF1 epsilon chain [Odo...    48   3e-05
gi|11467761|ref|NP_050812.1| ATP synthase CF1 epsilon chain [Nep...    48   3e-05
gi|11465582|ref|NP_045026.1| ATP synthase CF1 epsilon chain [Cya...    47   4e-05
gi|32028589|ref|ZP_00131745.1| hypothetical protein [Haemophilus...    47   7e-05
gi|23467973|ref|ZP_00123548.1| hypothetical protein [Haemophilus...    46   8e-05
>gi|22537027|ref|NP_687878.1| ATP synthase F1, epsilon subunit
           [Streptococcus agalactiae 2603V/R]
 gi|22533884|gb|AAM99750.1|AE014231_8 ATP synthase F1, epsilon
           subunit [Streptococcus agalactiae 2603V/R]
          Length = 137

 Score =  236 bits (602), Expect = 5e-62
 Identities = 137/137 (100%), Positives = 137/137 (100%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV
Sbjct: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR
Sbjct: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120

Query: 121 AEVALRRAINRISVGKK 137
           AEVALRRAINRISVGKK
Sbjct: 121 AEVALRRAINRISVGKK 137
>gi|25010937|ref|NP_735332.1| H+-transporting ATP synthase epsilon
           chain [Streptococcus agalactiae NEM316]
 gi|23095316|emb|CAD46526.1| H+-transporting ATP synthase epsilon
           chain [Streptococcus agalactiae NEM316]
          Length = 137

 Score =  233 bits (595), Expect = 3e-61
 Identities = 136/137 (99%), Positives = 136/137 (99%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPL VHQMKINRSHQEGV
Sbjct: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLIVHQMKINRSHQEGV 60

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR
Sbjct: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120

Query: 121 AEVALRRAINRISVGKK 137
           AEVALRRAINRISVGKK
Sbjct: 121 AEVALRRAINRISVGKK 137
>gi|20137263|sp|O50160|ATPE_STRBO ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|2662327|dbj|BAA23756.1| proton-translocating ATPase, epsiron
           subunit [Streptococcus bovis]
          Length = 138

 Score =  182 bits (463), Expect = 6e-46
 Identities = 102/138 (73%), Positives = 121/138 (86%), Gaps = 1/138 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEG- 59
           M  +TVQVVTPDGIRYDHHA+ I+V+TPDGEMGILP HINLIAPL VH+MKI+R+     
Sbjct: 1   MTFMTVQVVTPDGIRYDHHANFISVKTPDGEMGILPEHINLIAPLTVHEMKIHRTDDPNH 60

Query: 60  VDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
           VDWVA+NGGIIE+ ++ VTIVADSAER RDID++RAERAK RAER LE+AQ+T +IDE+R
Sbjct: 61  VDWVAINGGIIEIKDNLVTIVADSAERERDIDVSRAERAKIRAERKLEQAQSTHDIDEVR 120

Query: 120 RAEVALRRAINRISVGKK 137
           RA+VALRRA+NRISVG K
Sbjct: 121 RAQVALRRALNRISVGNK 138
>gi|15674809|ref|NP_268983.1| putative proton-translocating ATPase,
           epsiron subunit [Streptococcus pyogenes]
 gi|20137445|sp|Q9A0I6|ATPE_STRPY ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|13621939|gb|AAK33704.1| putative proton-translocating ATPase,
           epsiron subunit [Streptococcus pyogenes M1 GAS]
          Length = 138

 Score =  178 bits (451), Expect = 1e-44
 Identities = 100/138 (72%), Positives = 119/138 (85%), Gaps = 1/138 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQ-EG 59
           M Q+TVQVVTPDGI+YDHHA  I+V TPDGEMGILP HINLIAPL VH+MKI R  + E 
Sbjct: 1   MTQMTVQVVTPDGIKYDHHAKFISVTTPDGEMGILPNHINLIAPLQVHEMKIRRGGEDEK 60

Query: 60  VDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
           VDW+A+NGGIIE+ ++ VTIVADSAER RDID++RAERAK RAER + +A+TT NIDE+R
Sbjct: 61  VDWIAINGGIIEIKDNVVTIVADSAERDRDIDVSRAERAKLRAEREIAQAETTHNIDEVR 120

Query: 120 RAEVALRRAINRISVGKK 137
           RA+VALRRA+NRI+V KK
Sbjct: 121 RAKVALRRALNRINVSKK 138
>gi|19745848|ref|NP_606984.1| putative proton-translocating ATPase,
           epsiron subunit [Streptococcus pyogenes MGAS8232]
 gi|21910036|ref|NP_664304.1| putative proton-translocating ATPase
           epsilon subunit [Streptococcus pyogenes MGAS315]
 gi|28896266|ref|NP_802616.1| putative proton-translocating ATPase,
           epsiron subunit [Streptococcus pyogenes SSI-1]
 gi|24211485|sp|Q8P1K4|ATPE_STRP3 ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|19747996|gb|AAL97483.1| putative proton-translocating ATPase,
           epsiron subunit [Streptococcus pyogenes MGAS8232]
 gi|21904226|gb|AAM79107.1| putative proton-translocating ATPase
           epsilon subunit [Streptococcus pyogenes MGAS315]
 gi|28811517|dbj|BAC64449.1| putative proton-translocating ATPase,
           epsiron subunit [Streptococcus pyogenes SSI-1]
          Length = 138

 Score =  177 bits (448), Expect = 3e-44
 Identities = 99/138 (71%), Positives = 119/138 (85%), Gaps = 1/138 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQ-EG 59
           M Q+TVQVVTPDGI+YDHHA  I+V TPDGEMGILP HINLIAPL VH+MKI R  + E 
Sbjct: 1   MTQMTVQVVTPDGIKYDHHAKCISVTTPDGEMGILPNHINLIAPLQVHEMKIRRGGEDEK 60

Query: 60  VDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
           VDW+A+NGGIIE+ ++ VT+VADSAER RDID++RAERAK RAER + +A+TT NIDE+R
Sbjct: 61  VDWIAINGGIIEIKDNVVTVVADSAERDRDIDVSRAERAKLRAEREIAQAETTHNIDEVR 120

Query: 120 RAEVALRRAINRISVGKK 137
           RA+VALRRA+NRI+V KK
Sbjct: 121 RAKVALRRALNRINVSKK 138
>gi|24379916|ref|NP_721871.1| FoF1 membrane-bound
           proton-translocating ATPase, epsilon subunit
           [Streptococcus mutans UA159]
 gi|2493043|sp|P95790|ATPE_STRMU ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|7436139|pir||JC5742 membrane-bound proton-translocating ATPase
           (EC 3.6.1.-) epsilon chain - Streptococcus mutans
 gi|1773267|gb|AAD13384.1| ATPase, epsilon subunit [Streptococcus
           mutans]
 gi|24377896|gb|AAN59177.1|AE014985_1 FoF1 membrane-bound
           proton-translocating ATPase, epsilon subunit
           [Streptococcus mutans UA159]
          Length = 138

 Score =  166 bits (419), Expect = 8e-41
 Identities = 92/138 (66%), Positives = 117/138 (84%), Gaps = 1/138 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEG- 59
           MA++TVQ+VTPDG++YDHHA  I V+TP+GE+G+L  H NLIAPL VH+MKI R   +  
Sbjct: 1   MAEMTVQIVTPDGLKYDHHAKFILVKTPNGELGVLANHENLIAPLEVHEMKIKRIDDDSH 60

Query: 60  VDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
           VDWVAVNGGIIE+ ++ VTIVADSAER RDIDL+RAERAK+RAE+A+E+A+    IDE++
Sbjct: 61  VDWVAVNGGIIEIKDNLVTIVADSAERERDIDLSRAERAKKRAEKAIEEAKEQHRIDEVQ 120

Query: 120 RAEVALRRAINRISVGKK 137
           RA+VALRRA+NRI+VG K
Sbjct: 121 RAQVALRRALNRINVGSK 138
>gi|15901354|ref|NP_345958.1| ATP synthase F1, epsilon subunit
           [Streptococcus pneumoniae TIGR4]
 gi|15903402|ref|NP_358952.1| Proton-translocating ATPase, F1
           sector, epsilon-subunit [Streptococcus pneumoniae R6]
 gi|20137420|sp|Q97PT7|ATPE_STRPN ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|25290496|pir||E95175 ATP synthase F1, epsilon chain [imported] -
           Streptococcus pneumoniae (strain TIGR4)
 gi|25290500|pir||F98041 H+-transporting two-sector ATPase (EC
           3.6.3.14) chain C [imported] - Streptococcus pneumoniae
           (strain R6)
 gi|14972997|gb|AAK75598.1| ATP synthase F1, epsilon subunit
           [Streptococcus pneumoniae TIGR4]
 gi|15459006|gb|AAL00163.1| Proton-translocating ATPase, F1 sector,
           epsilon-subunit [Streptococcus pneumoniae R6]
 gi|18253305|gb|AAL66417.1|AF368465_7 proton-translocating ATPase
           epsilon subunit [Streptococcus pneumoniae]
          Length = 139

 Score =  155 bits (392), Expect = 1e-37
 Identities = 90/138 (65%), Positives = 115/138 (83%), Gaps = 1/138 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINR-SHQEG 59
           MAQLTVQ+VTPDG+ YDHHAS ++VRT DGEMGILP H N+IA L V ++K+ R   ++ 
Sbjct: 1   MAQLTVQIVTPDGLVYDHHASYVSVRTLDGEMGILPRHENMIAVLAVDEVKVKRIDDKDH 60

Query: 60  VDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
           V+W+AVNGG+IE+  D +TIVADSAERARDID++RAERAK RAERA+E+AQ    ID+ R
Sbjct: 61  VNWIAVNGGVIEIANDMITIVADSAERARDIDISRAERAKLRAERAIEEAQDKHLIDQER 120

Query: 120 RAEVALRRAINRISVGKK 137
           RA++AL+RAINRI+VG +
Sbjct: 121 RAKIALQRAINRINVGNR 138
>gi|20137593|sp|Q9ZJ00|ATPE_STRSA ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|4100658|gb|AAD00919.1| proton-translocating ATPase epsilon
           subunit [Streptococcus sanguinis]
          Length = 139

 Score =  149 bits (375), Expect = 1e-35
 Identities = 85/138 (61%), Positives = 112/138 (80%), Gaps = 1/138 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINR-SHQEG 59
           MAQ+TVQ+VTPDG+ YDHHA+ ++V+T DGE+GILP HIN IA L V Q+K+ R    + 
Sbjct: 1   MAQMTVQIVTPDGLIYDHHAAFVSVKTIDGELGILPRHINTIAVLEVDQVKVRRVDDDKH 60

Query: 60  VDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
           +DW+AVNGGIIE+ ++ +TIVADSAERARDID++RAERAK RAE  +E+A     ID+ R
Sbjct: 61  IDWIAVNGGIIEIADNVITIVADSAERARDIDISRAERAKRRAELEIEEAHDKHLIDQER 120

Query: 120 RAEVALRRAINRISVGKK 137
           RA++AL+RAINRI+VG +
Sbjct: 121 RAKIALQRAINRINVGTR 138
>gi|29377092|ref|NP_816246.1| ATP synthase F1, epsilon subunit
           [Enterococcus faecalis V583]
 gi|29344558|gb|AAO82316.1| ATP synthase F1, epsilon subunit
           [Enterococcus faecalis V583]
          Length = 139

 Score =  139 bits (350), Expect = 8e-33
 Identities = 79/137 (57%), Positives = 106/137 (76%), Gaps = 1/137 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEG- 59
           M  LTV VVTP+G+ YDHHA ++  +T DGE+GILP H  +I PL + +++I R+  +  
Sbjct: 1   MDSLTVNVVTPNGLVYDHHAKIVVAKTTDGEIGILPKHAPIIVPLAIDEVRIKRTDSDTH 60

Query: 60  VDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
           VDWVAVNGGI+EV ++ V+I+ADSAER RDID+ RAERAK+RAER +E+A+   + D++R
Sbjct: 61  VDWVAVNGGIMEVRDNVVSIIADSAERERDIDVPRAERAKQRAERLIEEAKAKDDRDQLR 120

Query: 120 RAEVALRRAINRISVGK 136
           RA VAL RAINRI+V K
Sbjct: 121 RATVALHRAINRINVSK 137
>gi|22991791|ref|ZP_00036482.1| hypothetical protein [Enterococcus
           faecium]
          Length = 140

 Score =  138 bits (347), Expect = 2e-32
 Identities = 77/134 (57%), Positives = 105/134 (77%), Gaps = 1/134 (0%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEG-VDW 62
           LTV VVTP G+ YDHHA+++  RT  GE+GILP H  +I PL + ++++ R+  +  VDW
Sbjct: 5   LTVNVVTPAGLVYDHHAAIVVARTTAGELGILPKHAPIIVPLTIDEVRVKRTDSDTHVDW 64

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
           +AVNGGI+EV ++ V+IVADSAER RDID++RAERAK+RAER +E+A+  Q+ +E++RA 
Sbjct: 65  IAVNGGIMEVRDNVVSIVADSAERERDIDVSRAERAKQRAERQIEEAKAKQDTNELKRAT 124

Query: 123 VALRRAINRISVGK 136
           VAL RAINRI V K
Sbjct: 125 VALHRAINRIKVSK 138
>gi|1168589|sp|P43453|ATPE_ENTHR ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|153574|gb|AAA26860.1| H+ ATPase
          Length = 140

 Score =  136 bits (342), Expect = 6e-32
 Identities = 76/134 (56%), Positives = 105/134 (77%), Gaps = 1/134 (0%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEG-VDW 62
           LTV VVTPDG+ YDHHA+++  RT  GE+GILP H  +I PL + ++++ R+  +  VDW
Sbjct: 5   LTVNVVTPDGLVYDHHAAIVVARTTAGEIGILPKHAPIIVPLTIDEVRVKRTDSDTHVDW 64

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
           +AVNGGI+EV ++ V+IVADSAER RDID++RAERAK+RAER + +A+  ++ +E++RA 
Sbjct: 65  IAVNGGIMEVRDNVVSIVADSAERERDIDVSRAERAKQRAERQIAEAKEKEDTNELKRAT 124

Query: 123 VALRRAINRISVGK 136
           VAL RAINRI V K
Sbjct: 125 VALHRAINRIKVSK 138
>gi|20137550|sp|Q9RAT9|ATPE_LACLC ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|6048353|gb|AAF02208.1|AF059739_8 H+-ATPase cytoplasmic F1-part
           epsilon-subunit [Lactococcus lactis subsp. cremoris]
 gi|15963438|dbj|BAB69472.1| H+-ATPase epsilon subunit [Lactococcus
           lactis subsp. lactis]
          Length = 141

 Score =  133 bits (335), Expect = 4e-31
 Identities = 76/132 (57%), Positives = 103/132 (77%), Gaps = 1/132 (0%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEG-VDW 62
           +T+QV+TP G+ YDHHA+ IT RT +GE+GILP  I+ I  L + ++K++R   E  VD+
Sbjct: 6   MTLQVITPAGVVYDHHANYITARTTNGEIGILPNMISTITGLEIDELKVSRPDDETHVDY 65

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
           +AVNGGIIE+ +  VTIVADSAER RDID++RAERAK RAE+ALE A+  +  DE++R E
Sbjct: 66  IAVNGGIIEIKDSLVTIVADSAERNRDIDVSRAERAKIRAEKALEVAKAEKKSDEIKRVE 125

Query: 123 VALRRAINRISV 134
           VAL RA+NR++V
Sbjct: 126 VALHRALNRLNV 137
>gi|15673745|ref|NP_267919.1| ATP synthase epsilon subunit
           [Lactococcus lactis subsp. lactis]
 gi|20137462|sp|Q9CES1|ATPE_LACLA ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|25290504|pir||C86845 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain [imported] - Lactococcus lactis
           subsp. lactis (strain IL1403)
 gi|12724785|gb|AAK05861.1|AE006406_5 ATP synthase epsilon subunit
           (EC 3.6.1.34) [Lactococcus lactis subsp. lactis]
 gi|15082074|gb|AAK84020.1|AF393838_9 H+-ATPase cytoplasmic F1-part
           epsilon-subunit [Lactococcus lactis subsp. lactis]
          Length = 141

 Score =  133 bits (334), Expect = 5e-31
 Identities = 78/132 (59%), Positives = 103/132 (77%), Gaps = 1/132 (0%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEG-VDW 62
           +T+QV+TP G+ YDHHA+ IT RT +GE+GILP  I+ IA L + ++K+ R   E  VD+
Sbjct: 6   MTLQVITPAGMIYDHHANYITARTTNGEIGILPNMISTIAGLEIDELKVRRPDDETHVDY 65

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
           +AVNGGIIE+ +  VTIVADSAER RDID++RAERAK RAE+ALE A+  +  DE+ RAE
Sbjct: 66  IAVNGGIIEIKDSLVTIVADSAERNRDIDVSRAERAKIRAEKALEVAKAEKKSDEINRAE 125

Query: 123 VALRRAINRISV 134
           VAL RA+NR++V
Sbjct: 126 VALHRALNRLNV 137
>gi|16804566|ref|NP_466051.1| highly similar to H+-transporting ATP
           synthase chain epsilon [Listeria monocytogenes EGD-e]
 gi|20137362|sp|Q8Y4C2|ATPE_LISMO ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|25290503|pir||AH1390 H+-transporting ATP synthase chain epsilon
           homolog atpC [imported] - Listeria monocytogenes (strain
           EGD-e)
 gi|16412016|emb|CAD00606.1| atpC [Listeria monocytogenes]
          Length = 134

 Score =  115 bits (287), Expect = 2e-25
 Identities = 67/132 (50%), Positives = 97/132 (72%), Gaps = 4/132 (3%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M  L V +VTPDG  Y+  A ++  RT  GE+GILPGH+ L+APL +  +++    + G 
Sbjct: 1   MGSLNVSIVTPDGPVYEGVAQMVIARTKAGELGILPGHVPLVAPLKIDIVRLKV--ESGE 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           +WVAVNGG +EVN ++V I+AD+AER +DID++RAE+AK+RAE  L +A+  Q +DE+  
Sbjct: 59  EWVAVNGGFMEVNGEEVNILADTAEREQDIDIDRAEKAKQRAEEELSRAK-EQKVDEV-M 116

Query: 121 AEVALRRAINRI 132
           A++AL+RAINRI
Sbjct: 117 AQLALQRAINRI 128
>gi|23002571|ref|ZP_00046246.1| hypothetical protein [Lactobacillus
           gasseri]
          Length = 146

 Score =  114 bits (286), Expect = 2e-25
 Identities = 64/133 (48%), Positives = 98/133 (73%), Gaps = 2/133 (1%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQ--EGVD 61
           L V VVTPDGI Y H+A+++ +R  DGE  I+  H+ ++ PL + ++++ R+H+  + VD
Sbjct: 8   LKVSVVTPDGIVYSHNATMVAMRAIDGERTIMYDHLPIVTPLAIGEVRVKRTHEMNDRVD 67

Query: 62  WVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            +AVNGG IE + ++ TI+ADSAERAR+ID+ RA+ AK+RAE+ +++A+   N  EM  A
Sbjct: 68  HIAVNGGYIEFSNNEATIIADSAERARNIDVERAQSAKKRAEQHMQEAKEKHNEREMLEA 127

Query: 122 EVALRRAINRISV 134
           E+ALRRA+NR+ V
Sbjct: 128 EIALRRAVNRLHV 140
>gi|16801733|ref|NP_472001.1| highly similar to H+-transporting ATP
           synthase chain epsilon [Listeria innocua]
 gi|20137390|sp|Q927W5|ATPE_LISIN ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|25290502|pir||AB1766 H+-transporting ATP synthase chain epsilon
           homolog atpC [imported] - Listeria innocua (strain
           Clip11262)
 gi|16415208|emb|CAC97898.1| atpC [Listeria innocua]
          Length = 134

 Score =  114 bits (284), Expect = 4e-25
 Identities = 67/132 (50%), Positives = 96/132 (71%), Gaps = 4/132 (3%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M  L V +VTPDG  Y+  A ++  RT  GE+GILPGH+ L+APL +  +++    + G 
Sbjct: 1   MGSLNVSIVTPDGPVYEGVAQMVIARTKAGELGILPGHVPLVAPLKIDIVRLKV--ESGE 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           +WVAVNGG +EVN ++V I+AD+AER +DID++RAE+AK+RAE  L +A+  Q +DE+  
Sbjct: 59  EWVAVNGGFMEVNGEEVNILADTAEREQDIDIDRAEKAKQRAEEELSRAK-EQKVDEV-M 116

Query: 121 AEVALRRAINRI 132
           A +AL+RAINRI
Sbjct: 117 ARLALQRAINRI 128
>gi|8671464|dbj|BAA96810.1| FoF1-ATP synthase epsilon subunit
           [thermophilic bacterium PS3]
          Length = 133

 Score =  112 bits (280), Expect = 1e-24
 Identities = 64/136 (47%), Positives = 95/136 (69%), Gaps = 5/136 (3%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M  + V VVTPDG  Y+    +++V+   GE+GILPGHI L+APL +   ++ +  +   
Sbjct: 1   MKTIHVSVVTPDGPVYEDDVEMVSVKAKSGELGILPGHIPLVAPLEISAARLKKGGK--T 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
            ++AV+GG +EV  D+VTI+A +AERA DID+ RA+ AKERAER L   Q+ Q+  + +R
Sbjct: 59  QYIAVSGGFLEVRPDKVTILAQAAERAEDIDVLRAKAAKERAERRL---QSQQDDIDFKR 115

Query: 121 AEVALRRAINRISVGK 136
           AE+AL+RA+NR+SV +
Sbjct: 116 AELALKRAMNRLSVAE 131
>gi|15616315|ref|NP_244620.1| ATP synthase epsilon subunit [Bacillus
           halodurans]
 gi|20137498|sp|Q9K6H6|ATPE_BACHD ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|25290495|pir||A84119 ATP synthase epsilon subunit atpC
           [imported] - Bacillus halodurans (strain C-125)
 gi|10176377|dbj|BAB07472.1| ATP synthase epsilon subunit [Bacillus
           halodurans]
          Length = 133

 Score =  112 bits (279), Expect = 1e-24
 Identities = 68/134 (50%), Positives = 95/134 (70%), Gaps = 4/134 (2%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M  L V VVTPDG  Y+    +++V+T +GE+GILP HI L+APL V  +++ +     V
Sbjct: 1   MPTLHVNVVTPDGKVYEGDVDMVSVKTVEGELGILPRHIPLVAPLTVGAVRLKKGST--V 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           D VAV+GG +EV  DQVTI+A++AE   DID+ RA  AKERAE+ L++A+  +NID  +R
Sbjct: 59  DLVAVSGGFVEVRPDQVTILAEAAELPSDIDVERARSAKERAEKRLQQAK-QENID-FKR 116

Query: 121 AEVALRRAINRISV 134
           AE++LRRA NR+ V
Sbjct: 117 AELSLRRATNRLDV 130
>gi|20137553|sp|Q9RGY0|ATPE_LACAC ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|6652834|gb|AAF22499.1|AF098522_9 F1F0-ATPase subunit epsilon
           [Lactobacillus acidophilus]
          Length = 146

 Score =  111 bits (277), Expect = 3e-24
 Identities = 65/131 (49%), Positives = 94/131 (71%), Gaps = 2/131 (1%)

Query: 6   VQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEG--VDWV 63
           V VVTP+G+ Y H  S++ VR  DGE  IL  HI ++ PL + ++K+ RS + G  +D +
Sbjct: 10  VIVVTPNGMIYSHRGSIVDVRAIDGERSILYNHIPILTPLAISEVKVKRSREMGSRIDHI 69

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
           A++GG IE + +  TIVADSAERAR+ID++RA+ AKERAE+ L +A+   +   + RA+V
Sbjct: 70  AISGGYIEFSNNVATIVADSAERARNIDVSRAQAAKERAEKRLREAREKHDERNLERAQV 129

Query: 124 ALRRAINRISV 134
           AL+RA+NRISV
Sbjct: 130 ALKRAMNRISV 140
>gi|14916963|sp|P22480|ATPE_BACFI ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|12061047|gb|AAG48364.1|AF330160_11 ATP synthase epsilon subunit
           [Bacillus pseudofirmus]
          Length = 133

 Score =  109 bits (273), Expect = 7e-24
 Identities = 67/137 (48%), Positives = 93/137 (66%), Gaps = 4/137 (2%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M+ + V VVTPDG  YD    ++ VRT +GE+GILP HI L+APL V  +++ + + E  
Sbjct: 1   MSTIRVNVVTPDGKVYDGDVDMVVVRTVEGELGILPKHIPLVAPLTVGAVRLKKGNSE-- 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           + VAV+GG +EV  DQVTI+A++AE    ID++RA  AKERAE  L    T Q+  + +R
Sbjct: 59  EQVAVSGGFVEVRPDQVTILAEAAELPSAIDVDRARAAKERAESRLN--STKQDAVDFKR 116

Query: 121 AEVALRRAINRISVGKK 137
           AE+AL+RAINR+ V  K
Sbjct: 117 AELALKRAINRLDVTGK 133
>gi|28378937|ref|NP_785829.1| H(+)-transporting two-sector ATPase,
           epsilon subunit [Lactobacillus plantarum WCFS1]
 gi|28271774|emb|CAD64680.1| H(+)-transporting two-sector ATPase,
           epsilon subunit [Lactobacillus plantarum WCFS1]
          Length = 142

 Score =  109 bits (272), Expect = 9e-24
 Identities = 68/135 (50%), Positives = 96/135 (70%), Gaps = 3/135 (2%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINR--SHQEGVD 61
           LTV +VTPDG  Y++   ++ VRT DGE+GILP HI +IA L + +++I +  S QE  D
Sbjct: 8   LTVSIVTPDGQVYENKTPMLIVRTIDGELGILPNHIPVIASLAIDEVRIKQLESDQED-D 66

Query: 62  WVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            +AVNGG +E + +  TIVADSAER  DID+ RAE A++RAE  ++ AQ   +  E+ RA
Sbjct: 67  EIAVNGGFVEFSNNTATIVADSAERQNDIDVARAENARKRAETRIQNAQQKHDDAELARA 126

Query: 122 EVALRRAINRISVGK 136
           +VALRRA+NR++V +
Sbjct: 127 QVALRRAMNRLNVAR 141
>gi|30023336|ref|NP_834967.1| ATP synthase epsilon chain [Bacillus
           cereus ATCC 14579]
 gi|29898897|gb|AAP12168.1| ATP synthase epsilon chain [Bacillus
           cereus ATCC 14579]
          Length = 133

 Score =  105 bits (262), Expect = 1e-22
 Identities = 59/134 (44%), Positives = 87/134 (64%), Gaps = 5/134 (3%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M    V +VTPDG  Y+    +++V+   GEMGILPGHI  +APL +  +++        
Sbjct: 1   MKTFPVSIVTPDGPVYEKEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGH--T 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           D+VAV+GG IEV  D+VT+++ SAE A  ID++RA  AK RAE+ L+  Q      + +R
Sbjct: 59  DYVAVSGGFIEVRPDKVTVLSSSAEEANHIDIHRANEAKRRAEQRLQDKQAHV---DFKR 115

Query: 121 AEVALRRAINRISV 134
           AE+AL+RA+NR++V
Sbjct: 116 AEMALQRAVNRLNV 129
>gi|21397776|ref|NP_653761.1| ATP-synt_DE_N, ATP synthase,
           Delta/Epsilon chain, beta-sandwich domain [Bacillus
           anthracis A2012]
 gi|30265327|ref|NP_847704.1| ATP synthase F1, epsilon subunit
           [Bacillus anthracis str. Ames]
 gi|30260005|gb|AAP29190.1| ATP synthase F1, epsilon subunit
           [Bacillus anthracis str. Ames]
          Length = 133

 Score =  104 bits (260), Expect = 2e-22
 Identities = 59/134 (44%), Positives = 87/134 (64%), Gaps = 5/134 (3%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M    V +VTPDG  Y+    +++V+   GEMGILPGHI  +APL +  +++        
Sbjct: 1   MKTFPVSIVTPDGPVYEKEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGH--T 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           D+VAV+GG IEV  D+VT+++ SAE A  ID++RA  AK RAE   ++ Q  Q   + +R
Sbjct: 59  DYVAVSGGFIEVRPDKVTVLSSSAEEANHIDIHRANEAKRRAE---QRMQDKQAHVDFKR 115

Query: 121 AEVALRRAINRISV 134
           AE+AL+RA+NR++V
Sbjct: 116 AEMALQRAVNRLNV 129
>gi|80097|pir||S17727 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - Bacillus firmus
          Length = 133

 Score =  103 bits (258), Expect = 4e-22
 Identities = 65/137 (47%), Positives = 92/137 (66%), Gaps = 4/137 (2%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M+ + V VVTPDG  YD    L+ VRT +GE+GI   HI L+AP+ V ++++ + + E  
Sbjct: 1   MSTIRVNVVTPDGKVYDGDVDLVVVRTVEGELGIFRKHIPLVAPVTVGRVRLKKGNSE-- 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           + VAV+GG +EV  DQVTI+A++AE    ID++RA  AKERAE  L    T Q+  + +R
Sbjct: 59  EQVAVSGGFVEVRADQVTILAEAAELPSAIDVDRARAAKERAESRLN--STKQDAVDFKR 116

Query: 121 AEVALRRAINRISVGKK 137
           AE+AL+RAINR+ V  K
Sbjct: 117 AELALKRAINRLDVTGK 133
>gi|23100429|ref|NP_693896.1| H(+)-transporting ATP synthase epsilon
           chain [Oceanobacillus iheyensis HTE831]
 gi|22778662|dbj|BAC14930.1| H(+)-transporting ATP synthase epsilon
           chain [Oceanobacillus iheyensis HTE831]
          Length = 131

 Score =  102 bits (253), Expect = 2e-21
 Identities = 60/136 (44%), Positives = 91/136 (66%), Gaps = 5/136 (3%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M  L V VVTP G   +    ++  +   GE+GILPGHI L++PL +  +++ + +    
Sbjct: 1   MRTLEVSVVTPGGPVLEESFEMVVCKAETGEIGILPGHIPLVSPLQISAVRLKKGND--T 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
            ++A++GG +EV  ++VTI+A SAE A DI++ RA+ AK+RAER L+  +   NID+  R
Sbjct: 59  KYLAISGGFMEVQPEKVTILAQSAETASDINVQRAKEAKDRAERRLQAKK--DNIDKT-R 115

Query: 121 AEVALRRAINRISVGK 136
           AE+AL+RAINR+ VGK
Sbjct: 116 AELALKRAINRLDVGK 131
>gi|728926|sp|P41012|ATPE_BACCA ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|533291|dbj|BAA07249.1| ATPase subunit epsilon [Bacillus
           caldotenax]
          Length = 132

 Score =  100 bits (249), Expect = 4e-21
 Identities = 58/136 (42%), Positives = 91/136 (66%), Gaps = 6/136 (4%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M  + V VVTPDG  Y+    +++V+   GE+GILPGHI L+APL +   ++ +  +   
Sbjct: 1   MKTIHVSVVTPDGPVYEDDVEMVSVKAKSGELGILPGHIRLVAPLEISAARLKKGGK--T 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
            ++AV+GG +EV  D+VTI+A +AERA DID+ RA +A++     L   Q+ Q+  + +R
Sbjct: 59  QYIAVSGGFLEVRPDKVTILAQAAERAEDIDVLRA-KARKSGRTPL---QSQQDDIDFKR 114

Query: 121 AEVALRRAINRISVGK 136
           AE+AL+RA+NR+SV +
Sbjct: 115 AELALKRAMNRLSVAE 130
>gi|114609|sp|P07678|ATPE_BACP3 ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|77461|pir||S02256 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - thermophilic bacterium PS-3
 gi|45807|emb|CAA27607.1| ATPase epsilon subunit (aa 1-132)
           [thermophilic bacterium PS3]
 gi|45818|emb|CAA30656.1| unnamed protein product [thermophilic
           bacterium PS3]
          Length = 132

 Score =  100 bits (249), Expect = 5e-21
 Identities = 58/136 (42%), Positives = 90/136 (65%), Gaps = 6/136 (4%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M  + V VVTPDG  Y+    +++V+   GE+GILPGHI L+APL +   ++ +  +   
Sbjct: 1   MKTIHVSVVTPDGPVYEDDVEMVSVKAKSGELGILPGHIPLVAPLEISAARLKKGGK--T 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
            ++AV+GG +EV  D VTI+A +AERA DID+ RA +A++     L   Q+ Q+  + +R
Sbjct: 59  QYIAVSGGFLEVRPDNVTILAQAAERAEDIDVLRA-KARKSGRTPL---QSQQDDIDFKR 114

Query: 121 AEVALRRAINRISVGK 136
           AE+AL+RA+NR+SV +
Sbjct: 115 AELALKRAMNRLSVAE 130
>gi|114593|sp|P12699|ATPE_BACME ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|67872|pir||PWBSEM H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - Bacillus megaterium
 gi|142562|gb|AAA82527.1| ATP synthase epsilon subunit
          Length = 134

 Score =  100 bits (248), Expect = 5e-21
 Identities = 57/137 (41%), Positives = 91/137 (65%), Gaps = 5/137 (3%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M  + V VVTPDG  Y+    +++ R   GE+GIL GHI ++APL +  +++ ++     
Sbjct: 1   MKTIHVSVVTPDGPVYESEVEMVSTRAQSGELGILHGHIPMVAPLQIGAVRLKKA--SST 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           + VAV+GG +EV  D+VTI+A +AE A +ID+ RAE AK+RAE  L+  Q   ++   +R
Sbjct: 59  ELVAVSGGFLEVRPDKVTILAQAAETAEEIDVARAEEAKKRAEMRLDSKQDDVDV---KR 115

Query: 121 AEVALRRAINRISVGKK 137
           AE+AL+RA+NR+ + ++
Sbjct: 116 AEIALKRAVNRLDISQR 132
>gi|1168588|sp|P42009|ATPE_BACST ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|534855|dbj|BAA07256.1| ATPase subunit epsilon [Geobacillus
           stearothermophilus]
          Length = 132

 Score = 99.8 bits (247), Expect = 7e-21
 Identities = 57/136 (41%), Positives = 89/136 (64%), Gaps = 6/136 (4%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M  + V VVTPDG  Y+    +++V+   GE+GILPGHI L+APL +   ++ +  +   
Sbjct: 1   MKTIHVSVVTPDGPVYEDDVEMVSVKAKSGELGILPGHIPLVAPLEISAARLKKGGK--T 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
            ++A +GG +EV  D VTI+A +AERA DID+ RA +A++     L   Q+ Q+  + +R
Sbjct: 59  QYIAFSGGFLEVRPDNVTILAQAAERAEDIDVLRA-KARKSGRTPL---QSQQDDIDFKR 114

Query: 121 AEVALRRAINRISVGK 136
           AE+AL+RA+NR+SV +
Sbjct: 115 AELALKRAMNRLSVAE 130
>gi|16080733|ref|NP_391561.1| ATP synthase (subunit epsilon)
           [Bacillus subtilis]
 gi|584813|sp|P37812|ATPE_BACSU ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|2118193|pir||I40369 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain (atpC) - Bacillus subtilis
 gi|433992|emb|CAA82261.1| ATP synthase subunit epsilon [Bacillus
           subtilis]
 gi|2636205|emb|CAB15697.1| ATP synthase (subunit epsilon) [Bacillus
           subtilis subsp. subtilis str. 168]
          Length = 132

 Score = 99.8 bits (247), Expect = 8e-21
 Identities = 59/137 (43%), Positives = 89/137 (64%), Gaps = 5/137 (3%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M  + V +VTPDG  YD    +++VR   G++GILPGHI  +APL +  +++ +  Q   
Sbjct: 1   MKTVKVNIVTPDGPVYDADIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQ--T 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           + VAV+GG +EV  D VTI+A +AE A  ID  RAE A++RA+   E+  +  +  ++RR
Sbjct: 59  EMVAVSGGFVEVRPDHVTILAQAAETAEGIDKERAEAARQRAQ---ERLNSQSDDTDIRR 115

Query: 121 AEVALRRAINRISVGKK 137
           AE+AL+RA+NR+ V  K
Sbjct: 116 AELALQRALNRLDVAGK 132
>gi|23023844|ref|ZP_00063073.1| hypothetical protein [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 148

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 59/132 (44%), Positives = 85/132 (63%), Gaps = 3/132 (2%)

Query: 4   LTVQVVTPDGIRYDHHA-SLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW 62
           +TVQ+VTP G  Y+     +  V T  G++GI+  H+ ++A L + ++ + R   +  + 
Sbjct: 12  ITVQIVTPAGEVYNESGIDIAVVNTQGGQVGIMAKHVPILAALTIDELIVKRGDDK--ES 69

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
           +AVNGGI E + D +T+VADSAE +  ID++RAE AKERAE  L  AQ   N  E+RRA 
Sbjct: 70  LAVNGGIAEFSNDTLTVVADSAETSDVIDVSRAESAKERAEARLAHAQDDHNDAELRRAR 129

Query: 123 VALRRAINRISV 134
           +AL RA+NRI V
Sbjct: 130 IALMRAVNRIHV 141
>gi|23037515|ref|ZP_00069723.1| hypothetical protein [Oenococcus
           oeni MCW]
          Length = 142

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 60/135 (44%), Positives = 86/135 (63%), Gaps = 6/135 (4%)

Query: 3   QLTVQVVTPDGIRYDHH-ASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVD 61
           +LT+ +VTPDG  Y+    +L  + T  G+MGI+  H+ ++  L + QM+I+R  +E  D
Sbjct: 11  KLTISIVTPDGTAYNQSDVNLTVLDTSIGQMGIMANHVPIVVALKISQMRIHRGEKE--D 68

Query: 62  WVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
              VNGG  E + + +T+VADSAE A DID+NRA  A++RA+    +AQ  +  DE  RA
Sbjct: 69  LYTVNGGFAEFSNNVLTVVADSAENAEDIDVNRAHAAEQRAK---ARAQNAKTADERARA 125

Query: 122 EVALRRAINRISVGK 136
            VAL RAINRI+  K
Sbjct: 126 RVALARAINRINTSK 140
>gi|15925092|ref|NP_372626.1| FoF1-ATP synthase epsilon subunit
           [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927676|ref|NP_375209.1| FoF1-ATP synthase epsilon subunit
           [Staphylococcus aureus subsp. aureus N315]
 gi|21283755|ref|NP_646843.1| FoF1-ATP synthase epsilon subunit
           [Staphylococcus aureus subsp. aureus MW2]
 gi|20137439|sp|Q99SF6|ATPE_STAAM ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|13701896|dbj|BAB43188.1| FoF1-ATP synthase epsilon subunit
           [Staphylococcus aureus subsp. aureus N315]
 gi|14247875|dbj|BAB58264.1| FoF1-ATP synthase epsilon subunit
           [Staphylococcus aureus subsp. aureus Mu50]
 gi|21205197|dbj|BAB95891.1| FoF1-ATP synthase epsilon subunit
           [Staphylococcus aureus subsp. aureus MW2]
          Length = 134

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 53/137 (38%), Positives = 84/137 (60%), Gaps = 6/137 (4%)

Query: 1   MAQLTVQVVTPDGIRYDH-HASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEG 59
           M  L + +VTP+G  Y+  +  L+ ++T  GE+G++ GHI  +A L    +K+     +G
Sbjct: 1   MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVK--FHDG 58

Query: 60  VDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
            +++AV+ G +EV +D+V+I+  +AE AR+ID+ RA+ AK RAE  LE      +I    
Sbjct: 59  TEYIAVSDGFVEVRKDKVSIIVQTAETAREIDVERAKLAKARAESHLENDDDNTDI---H 115

Query: 120 RAEVALRRAINRISVGK 136
           RAE AL RA NR+ V +
Sbjct: 116 RAERALERANNRLRVAE 132
>gi|20137564|sp|Q9S5B5|ATPE_DESVM ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|5811569|dbj|BAA83614.1| F1F0-ATPase epsilon subunit
           [Desulfovibrio vulgaris]
          Length = 134

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 43/107 (40%), Positives = 67/107 (62%), Gaps = 2/107 (1%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L +++VTPD +        +     +GE GILP HI  ++ LN+  +      +    W+
Sbjct: 5   LHLEIVTPDRLVLSEKVDYVGAPGYEGEFGILPNHIPFLSALNIGSLYYKAGGK--THWI 62

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQ 110
            V+GG  EV++++VT++A+SAERA DIDL RA +AKERAE+ L +A+
Sbjct: 63  FVSGGFAEVSDNKVTVLAESAERAEDIDLERARKAKERAEQRLAQAK 109
>gi|25290499|pir||C90003 FoF1-ATP synthase epsilon subunit
           [imported] - Staphylococcus aureus (strain N315)
          Length = 134

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 53/137 (38%), Positives = 83/137 (59%), Gaps = 6/137 (4%)

Query: 1   MAQLTVQVVTPDGIRYDH-HASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEG 59
           M  L + +VTP G  Y+  +  L+ ++T  GE+G++ GHI  +A L    +K+     +G
Sbjct: 1   MNTLNLDIVTPXGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVK--FHDG 58

Query: 60  VDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
            +++AV+ G +EV +D+V+I+  +AE AR+ID+ RA+ AK RAE  LE      +I    
Sbjct: 59  TEYIAVSDGFVEVRKDKVSIIVQTAETAREIDVERAKLAKARAESHLENDDDNTDI---H 115

Query: 120 RAEVALRRAINRISVGK 136
           RAE AL RA NR+ V +
Sbjct: 116 RAERALERANNRLRVAE 132
>gi|23114963|ref|ZP_00100240.1| hypothetical protein
           [Desulfitobacterium hafniense]
          Length = 132

 Score = 79.7 bits (195), Expect = 8e-15
 Identities = 49/132 (37%), Positives = 85/132 (64%), Gaps = 6/132 (4%)

Query: 5   TVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWVA 64
           T++VV+P+G      A  + +   +GE+GILP H  LI+ + +  ++   + +  V+ +A
Sbjct: 6   TLRVVSPEGNVLKEEAEFVVLPGGNGEIGILPNHAPLISSIEIGVIRYTVNGK--VEKIA 63

Query: 65  VNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVA 124
            +GG +EV++++VTI+AD+AE    +DL+RA  AKERAE+ L + +      ++RRAE+A
Sbjct: 64  TSGGFVEVSDNKVTILADTAEPGERVDLDRALAAKERAEKRLTQREGI----DVRRAELA 119

Query: 125 LRRAINRISVGK 136
           L RA+ RI+  +
Sbjct: 120 LMRAVARINAAR 131
>gi|20070094|gb|AAM01191.1| H+-ATPase cytoplasmic F1-part
          epsilon-subunit [Streptococcus thermophilus]
          Length = 48

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 36/47 (76%), Positives = 41/47 (86%)

Query: 1  MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNV 47
          MAQ+TVQVVTPDG++YDHHAS I   T DG++GILPGHINLIAPL V
Sbjct: 1  MAQMTVQVVTPDGLKYDHHASFIHAVTKDGQIGILPGHINLIAPLEV 47
>gi|27468617|ref|NP_765254.1| FoF1-ATP synthase epsilon subunit
           [Staphylococcus epidermidis ATCC 12228]
 gi|27316164|gb|AAO05298.1|AE016749_244 FoF1-ATP synthase epsilon
           subunit [Staphylococcus epidermidis ATCC 12228]
          Length = 134

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 52/137 (37%), Positives = 80/137 (57%), Gaps = 6/137 (4%)

Query: 1   MAQLTVQVVTPDGIRYDHH-ASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEG 59
           M  L + +VTP+G  Y+     +  ++T  GEMGI+ GHI  +A L    +K+N     G
Sbjct: 1   MNTLRLNIVTPNGSVYEREDVEMAVLQTTAGEMGIMYGHIPTVAALKTGHVKVN--FHNG 58

Query: 60  VDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
            +++AV+ G IE  + Q++I+  +AE A +ID+ RA+ AK RAE  LE      +I+   
Sbjct: 59  NEFIAVSDGFIEARQHQLSIIVQTAEPASEIDVERAKLAKSRAESHLEDDDDNTDIN--- 115

Query: 120 RAEVALRRAINRISVGK 136
           RA+ AL RA NR+ V +
Sbjct: 116 RAKRALERANNRLRVAE 132
>gi|23039555|ref|ZP_00071113.1| hypothetical protein [Trichodesmium
           erythraeum IMS101]
          Length = 137

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 44/131 (33%), Positives = 77/131 (58%), Gaps = 6/131 (4%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           LTV+V+ PD   +D  A  + + +  G++GIL GH  L+  L+   M++   +    DW+
Sbjct: 3   LTVRVIAPDKTIWDKEAQEVILPSTTGQLGILGGHAPLLTALDTGVMRVRAEN----DWI 58

Query: 64  AVN--GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
           A+   GG  E+  D+V+I+ + AER  +ID  +A  A E AE+ L+ ++++ N+ E  +A
Sbjct: 59  AIALMGGFAEIEADEVSILVNGAERGDNIDTEKARLAYEEAEKRLQTSESSDNLQEKIKA 118

Query: 122 EVALRRAINRI 132
           +  L+RA  R+
Sbjct: 119 KQTLKRARARL 129
>gi|20137262|sp|O50143|ATPE_RUMAL ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|2662067|dbj|BAA23689.1| proton-translocating ATPase, epsiron
           subunit [Ruminococcus albus]
          Length = 134

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 53/138 (38%), Positives = 83/138 (59%), Gaps = 6/138 (4%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           MA   ++V+TP+ I ++  A  +  +T  G +GIL GH   +A +   +MKI        
Sbjct: 1   MAVFKLRVLTPEKIFFEGDAEQLIAKTTSGYVGILKGHAPYVASIVPSEMKIRSDGS--F 58

Query: 61  DWVAVNGGIIEVNEDQ-VTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
              A++ GI++V+ED  VT++  + E + +ID+ RAER+K RAE+ L KA+T++   E  
Sbjct: 59  RSAAISDGIVKVSEDSMVTVLTSAIEWSDEIDVARAERSKARAEKQL-KAETSRT--EFD 115

Query: 120 RAEVALRRAINRISVGKK 137
            AE  L+RA+NRISV  K
Sbjct: 116 LAERQLKRAVNRISVANK 133
>gi|15896118|ref|NP_349467.1| FoF1-type ATP synthase epsilon subunit
           [Clostridium acetobutylicum]
 gi|17372693|sp|Q9Z686|ATPE_CLOAB ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|25290498|pir||D97252 foF1-type ATP synthase epsilon chain
           [imported] - Clostridium acetobutylicum
 gi|4323569|gb|AAD16427.1| ATP synthase subunit epsilon [Clostridium
           acetobutylicum]
 gi|15025910|gb|AAK80807.1|AE007784_4 FoF1-type ATP synthase epsilon
           subunit [Clostridium acetobutylicum]
          Length = 133

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 49/129 (37%), Positives = 75/129 (57%), Gaps = 5/129 (3%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           + + ++TP    Y      I  RT +GE+GILP H +L+A L   +  I          V
Sbjct: 5   IKLSILTPQKTFYVGDVKEIITRTVEGEIGILPNHTDLVAFLTPTE-TILVEEDGSRKKV 63

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
             + GI+ V E +V+ + D++E   +ID+ RAE AKERAE+ L   +T+ NID ++RAE+
Sbjct: 64  FTSTGILNVGESEVSFMCDASEWPDEIDIQRAETAKERAEKRL---KTSNNID-VKRAEL 119

Query: 124 ALRRAINRI 132
           +L RA+ RI
Sbjct: 120 SLSRALARI 128
>gi|29565618|ref|NP_817197.1| H+-ATPase epsilon subunit [Pinus
           koraiensis]
 gi|29469717|gb|AAO74045.1| H+-ATPase epsilon subunit [Pinus
           koraiensis]
          Length = 137

 Score = 70.5 bits (171), Expect = 5e-12
 Identities = 41/125 (32%), Positives = 79/125 (62%), Gaps = 5/125 (4%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L ++V++P+ + +D     I + T  G+MG+LP H++L+  +++  MKI  + +     +
Sbjct: 3   LNLRVLSPNRVIWDSEVQEIIISTNSGQMGVLPNHVSLVTAVDIGVMKIRLNGKWST--M 60

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
           A+ GG  ++++D++TI+ ++AER  DIDL +A+    RA+  L +A+  + + E   A+V
Sbjct: 61  ALMGGFAKIDKDRITILVNNAERDVDIDLQKAQETFRRAKACLVQAEGKRQVIE---ADV 117

Query: 124 ALRRA 128
           AL+RA
Sbjct: 118 ALKRA 122
>gi|20807131|ref|NP_622302.1| F0F1-type ATP synthase epsilon subunit
           (mitochondrial delta subunit) [Thermoanaerobacter
           tengcongensis]
 gi|22095477|sp|Q8RC14|ATPE_THETN ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|20515626|gb|AAM23906.1| F0F1-type ATP synthase epsilon subunit
           (mitochondrial delta subunit) [Thermoanaerobacter
           tengcongensis]
          Length = 138

 Score = 69.7 bits (169), Expect = 8e-12
 Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 10/135 (7%)

Query: 6   VQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPL---NVHQMKINRSHQEGVDW 62
           ++V+TP    Y+     I V T  G++GIL  HI L  P+      Q+K +   +E    
Sbjct: 7   LEVLTPYRKFYEGDVEEIIVTTTTGQIGILKDHIPLTTPIAQAGTLQIKKDGQWKEAF-- 64

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
             ++GG +EV  D VTI++ +AE   +ID+ RA+ AKERAE  L + ++ Q   E   AE
Sbjct: 65  --ISGGFMEVRRDGVTILSSAAEWPEEIDIARAQAAKERAEEKLRQKKSKQ---EYIAAE 119

Query: 123 VALRRAINRISVGKK 137
            AL+RA+ R+ +  K
Sbjct: 120 AALKRALMRLKIASK 134
>gi|15828736|ref|NP_326096.1| ATP SYNTHASE EPSILON CHAIN [Mycoplasma
           pulmonis]
 gi|17366628|sp|Q98QU6|ATPE_MYCPU ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|25290508|pir||A90545 atp synthase epsilon chain [imported] -
           Mycoplasma pulmonis  (strain UAB CTIP)
 gi|14089678|emb|CAC13438.1| ATP SYNTHASE EPSILON CHAIN [Mycoplasma
           pulmonis]
          Length = 141

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 39/133 (29%), Positives = 74/133 (55%), Gaps = 4/133 (3%)

Query: 3   QLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW 62
           QL + + TP+GI ++    ++TV T  G +GI  GH  LI+ + + ++ IN    +    
Sbjct: 2   QLQLIITTPNGIFFNEKVDIVTVVTAGGHIGIQYGHQPLISTIEISELHINTEGHKDYRI 61

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNID-EMRRA 121
            ++NGG++ V +D+  I+  + E   DID+   E+A+   +  +E    ++N D +  R 
Sbjct: 62  CSINGGLLYVEKDKANIITGAIEFKEDIDI---EKARREHDYLVEILSNSKNKDSDYFRN 118

Query: 122 EVALRRAINRISV 134
           E+ L++ INR+ +
Sbjct: 119 ELKLKKVINRLKI 131
>gi|23054146|ref|ZP_00080313.1| hypothetical protein [Geobacter
           metallireducens]
          Length = 138

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 47/135 (34%), Positives = 68/135 (49%), Gaps = 4/135 (2%)

Query: 3   QLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW 62
           +L V +VTP           IT     GE  +LPGH   +  L + ++   +  Q     
Sbjct: 4   KLKVDLVTPYKKILSEEVDEITATGALGEFSVLPGHAPFLTSLKIGELTYKKGGQ--FFH 61

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
           +AVN G  EV +D+VT++ ++AERA +IDL RA+ A  RAE AL+           +  E
Sbjct: 62  LAVNWGYFEVEDDKVTVLVETAERADEIDLERAKAALGRAEAALKGLSPEDK--SYKTQE 119

Query: 123 VALRRAINRISVGKK 137
            AL RA+ R+ V  K
Sbjct: 120 AALERALIRMQVAGK 134
>gi|23125400|ref|ZP_00107335.1| hypothetical protein [Nostoc
           punctiforme]
          Length = 137

 Score = 67.4 bits (163), Expect = 4e-11
 Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 5/128 (3%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           LTV+V++PD   +D  A  + + +  G++GIL GH  L+  L+   M++  +  +  + +
Sbjct: 3   LTVRVISPDKTVWDAPAEEVVLPSTTGQLGILTGHAPLLTALDTGVMRVRAAKNQNWEAI 62

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
           A+ GG  EV E++VTI+ + AER   I+L  A  A  +AE  L +  +     E R+A++
Sbjct: 63  ALLGGFAEVEENEVTILVNGAERGDKINLEEARAAYNKAEAGLNQVSS-----EDRQAQI 117

Query: 124 ALRRAINR 131
              +A  R
Sbjct: 118 KANQAFKR 125
>gi|22266800|gb|AAM94914.1|AF522463_9 subunit epsilon [Ilyobacter
           tartaricus]
          Length = 134

 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 44/137 (32%), Positives = 80/137 (58%), Gaps = 5/137 (3%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           MA   ++V+TP     +    +I +RT +G+MG+L  H   +A L++ +MKI  S +E  
Sbjct: 1   MATFKLEVITPLKKIIEKEVEMIVLRTTEGDMGVLANHAPFVAELSIGEMKIKSSDEEVS 60

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
            +V+  GG ++V+ ++ TI+AD A  AR+ID+   E AK+ AE A  K +  +   E+  
Sbjct: 61  YFVS--GGFMDVSREKTTILADEAMDAREIDI---EIAKKDAEVARAKLKKLKEDREIAS 115

Query: 121 AEVALRRAINRISVGKK 137
            + AL+ A+ ++ + ++
Sbjct: 116 TQKALQDALTKVRIAEQ 132
>gi|231604|sp|P29709|ATPE_PROMO ATP synthase epsilon chain, sodium
           ion specific (Na(+)-translocating ATPase epsilon
           subunit)
 gi|420760|pir||S29042 Na+-transporting ATP synthase (EC 3.6.1.-)
           epsilon chain - Propionigenium modestum
 gi|45656|emb|CAA41375.1| F1 subunit [Propionigenium modestum]
          Length = 137

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 41/137 (29%), Positives = 81/137 (58%), Gaps = 5/137 (3%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           MA   ++VVTP     D  A ++ +RT +G+MG++  H   +A L V +MKI  ++ E  
Sbjct: 1   MATFKLEVVTPLKKVLDRDAEMVIMRTIEGDMGVMADHAPFVAELAVGEMKIKSANGEEA 60

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
            +V+  GG +E+++++  I+AD A   ++ID+ RA+R  E A+  L K +  ++I   ++
Sbjct: 61  YFVS--GGFLEISKEKTMILADEAIDVKEIDVERAKREAEIAKETLVKLKEDKDIAVTQK 118

Query: 121 AEVALRRAINRISVGKK 137
              +L+ A+ ++ + ++
Sbjct: 119 ---SLQEALTKVRIAEQ 132
>gi|33241041|ref|NP_875983.1| ATP synthase epsilon subunit
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
 gi|33238570|gb|AAQ00636.1| ATP synthase epsilon subunit
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
          Length = 136

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 3/121 (2%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           LT++V+ PD   +D     + + +  G +GILPGHI+++  +++  +K+ RS     D +
Sbjct: 3   LTLRVLAPDKSVFDDTVEEVILPSTTGLLGILPGHISMVTAIDIGVLKL-RSSNGNWDSI 61

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKA--QTTQNIDEMRRA 121
           A+ GG  EV  D VT++ ++AE  + ID   AE+  E+A+ AL K   Q   + D+++  
Sbjct: 62  ALMGGFAEVESDDVTVLVNAAELGKSIDKATAEKEFEQAKAALNKLEDQAGNSADKLKAK 121

Query: 122 E 122
           E
Sbjct: 122 E 122
>gi|22982098|ref|ZP_00027408.1| hypothetical protein [Burkholderia
           fungorum]
          Length = 141

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 1/107 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           MA + V VV+ +   +   A  + +    GE+GILPGH  LI  +    ++I   + E  
Sbjct: 1   MATIKVDVVSAEEQIFSGQAKFVALPGEAGELGILPGHTPLITRIRPGAVRIEAENGEE- 59

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALE 107
           ++V V GGI+EV    VT++AD+A R +D+D  +AE A++RAE AL+
Sbjct: 60  EFVFVAGGILEVQPGAVTVLADTAIRGKDLDEAKAEDARKRAEEALQ 106
>gi|31455366|emb|CAD37195.1| ATP synthase epsilon chain [Oenococcus
           oeni]
          Length = 102

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 5/105 (4%)

Query: 32  MGILPGHINLIAPLNVHQMKINRSHQEGVDWVAVNGGIIEVNEDQVTIVADSAERARDID 91
           MGI+  H+ ++  L + QM+I+R  +E  D   VNGG  E + + +T+VADSAE A DID
Sbjct: 1   MGIMANHVPIVVALKISQMRIHRGEKE--DLYTVNGGFAEFSNNVLTVVADSAENAEDID 58

Query: 92  LNRAERAKERAERALEKAQTTQNIDEMRRAEVALRRAINRISVGK 136
           +NRA  A++RA+    +AQ  +  DE  RA VAL RAINRI+  K
Sbjct: 59  VNRAHAAEQRAK---ARAQNAKTADERARARVALARAINRINTSK 100
>gi|3913117|sp|O47036|ATPE_PICAB ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|7436144|pir||T14828 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - Norway spruce chloroplast
 gi|2764567|emb|CAA04457.1| H+-ATP synthase subunit E [Picea abies]
          Length = 137

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 41/129 (31%), Positives = 78/129 (59%), Gaps = 5/129 (3%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L ++V++P+ + +D     I + T  G++G+LP H +L+A +++  MKI  + Q     +
Sbjct: 3   LNLRVLSPNRVIWDSEVKEIILSTNSGQIGVLPNHASLVAAVDIGVMKIRLNGQWST--M 60

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
           A+ GG  +++ D++T++ ++AER  DIDL  A+   + A+  L +A+  +   E   A+V
Sbjct: 61  ALMGGFAKIDNDRITVLVNNAERDVDIDLKEAQETFKVAKADLARAEGKRQAIE---ADV 117

Query: 124 ALRRAINRI 132
           AL+RA  R+
Sbjct: 118 ALKRARTRL 126
>gi|17232530|ref|NP_489078.1| ATP synthase epsilon subunit [Nostoc
           sp. PCC 7120]
 gi|20141200|sp|P06542|ATPE_ANASP ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|25290507|pir||AF2435 ATP synthase epsilon chain [imported] -
           Nostoc sp. (strain PCC 7120)
 gi|17134176|dbj|BAB76737.1| ATP synthase epsilon subunit [Nostoc
           sp. PCC 7120]
          Length = 137

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 39/128 (30%), Positives = 67/128 (51%), Gaps = 5/128 (3%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           LTV+V++PD   +D  A  + + +  G++GIL GH  L+  L+   +++  S  +    +
Sbjct: 3   LTVRVISPDKTVWDAEADEVILPSTTGQLGILSGHAPLLTALDTGVLRVRTSKSQNWQAI 62

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
           A+ GG  EV ED+VTI+ +  ER   I+L  A  A  +A+  L +          R+A++
Sbjct: 63  ALLGGFAEVEEDEVTILVNGGERGDTINLEEARTAYSQAQTKLNQVPAGD-----RQAQI 117

Query: 124 ALRRAINR 131
              +A  R
Sbjct: 118 QANQAFKR 125
>gi|16330680|ref|NP_441408.1| ATP synthase e subunit [Synechocystis
           sp. PCC 6803]
 gi|7436134|pir||S75527 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - Synechocystis sp. (strain PCC
           6803)
 gi|1653172|dbj|BAA18088.1| ATP synthase e subunit [Synechocystis
           sp. PCC 6803]
          Length = 165

 Score = 64.3 bits (155), Expect = 4e-10
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 6/131 (4%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW- 62
           LTV+V+TPD + +D     + + +  G++GIL  H  L+  L +  M++    + G DW 
Sbjct: 32  LTVRVITPDKVVWDEEVQELILPSTTGQLGILSNHAPLLTALEIGVMRV----RPGKDWQ 87

Query: 63  -VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            +AV GG  EV  ++V ++ + AE    ID   A +A   A+ ALE+A   ++     +A
Sbjct: 88  NIAVMGGFAEVENNEVKVLVNGAELGTTIDAESARQAYTAAQGALEEANRGEDKPNQLKA 147

Query: 122 EVALRRAINRI 132
               ++A  R+
Sbjct: 148 SNNYKKARARL 158
>gi|21223734|ref|NP_629513.1| ATP synthase epsilon chain
           [Streptomyces coelicolor A3(2)]
 gi|1703742|sp|P50011|ATPE_STRCO ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|480960|pir||S37548 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - Streptomyces lividans
 gi|581686|emb|CAA80328.1| H(+)-transporting ATP synthase
           [Streptomyces lividans]
 gi|8568796|emb|CAB94545.1| ATP synthase epsilon chain [Streptomyces
           coelicolor A3(2)]
          Length = 124

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 45/130 (34%), Positives = 74/130 (56%), Gaps = 8/130 (6%)

Query: 2   AQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVD 61
           A+L V +V  D   +   A+L+  RT  G++G++PGH  L+  L    + I R+   G  
Sbjct: 3   AELHVALVAADREVWSGEATLVVARTTSGDIGVMPGHQPLLGVLESGPVTI-RTSDGGTV 61

Query: 62  WVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             AV+GG I   +++++++A+ AE + +ID++       RAER LE+A+T  +    RRA
Sbjct: 62  VAAVHGGFISFADNKLSLLAEVAELSDEIDVH-------RAERKLEQAKTEGDAHAERRA 114

Query: 122 EVALRRAINR 131
           +V LR A  R
Sbjct: 115 DVRLRAAAGR 124
>gi|22980667|ref|ZP_00026370.1| hypothetical protein [Ralstonia
           metallidurans]
          Length = 138

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 39/107 (36%), Positives = 59/107 (54%), Gaps = 1/107 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           MA + V VV+ +   +   A  + +    GE+GILPGH  LI  +    ++I +    G 
Sbjct: 1   MATILVDVVSAEASIFSGQAKFVALPGESGELGILPGHTPLITRIQPGAVRIEK-EDGGE 59

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALE 107
           ++V V GGI+EV    VT++AD+A R  D+D  +A  AK  AE  L+
Sbjct: 60  EFVFVAGGILEVQPQHVTVLADTAIRGTDLDEAKASEAKRAAEEMLQ 106
>gi|24298791|dbj|BAC22106.1| F-ATPase epsilon-subunit [Thermotoga
           neapolitana]
          Length = 107

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 37/109 (33%), Positives = 60/109 (54%), Gaps = 2/109 (1%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           + V++VTP G  +D  +  ++ RT +G MGILP    +I  L+V  +KI    +E    +
Sbjct: 1   MKVKIVTPYGTVFDRESDFVSFRTVEGAMGILPRRAPIITQLSVCDVKIKSGEEEFR--L 58

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTT 112
            V GG +  +  +VTI+ + A R  DI  +R   A+ER ER  +  Q++
Sbjct: 59  KVAGGFLVCDGKEVTIITEEAGREEDISPDRFMEARERVERVRKFFQSS 107
>gi|22797515|emb|CAD23920.1| ATP synthase epsilon subunit [Styrax
           officinalis]
          Length = 132

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 41/131 (31%), Positives = 76/131 (57%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I ++     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWNSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DIDL  A++  E AE +L+KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSNDIDLQEAQQTLEIAEASLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|23133128|ref|ZP_00114902.1| hypothetical protein [Synechococcus
           sp. WH 8102]
          Length = 136

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 2/133 (1%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           LT++V+ PD   +D  A  + + +  G++GILPGHI+L+  ++V  +++  +   G + +
Sbjct: 3   LTLRVLAPDQNVFDGSADEVILPSTTGQLGILPGHISLLTAIDVGVLRVRANG--GWNSI 60

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
           A+ GG  EV+ D+VT++ + AE    ID N AE   ++A   ++  +      E  +A+ 
Sbjct: 61  ALMGGFAEVDADEVTVLVNQAELGSTIDGNTAEADFQKATTVVDGLEGQPASPEKVKAQQ 120

Query: 124 ALRRAINRISVGK 136
            L  A  R+   K
Sbjct: 121 QLNMARARMQASK 133
>gi|32480849|ref|NP_862760.1| ATPase epsilon subunit [Calycanthus
           fertilis var. ferax]
 gi|32399385|emb|CAD28727.1| ATPase epsilon subunit [Calycanthus
           fertilis var. ferax]
          Length = 132

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 3   LNLCVLTPNRIIWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNGQ----WL 58

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             AV GG   +  +++TI+ + AE+  DID   A+R  E AE  L KA+  + + E   A
Sbjct: 59  MMAVMGGFARIGNNEITILVNDAEKGSDIDPQEAQRTLEIAEANLSKAEGKRQVIE---A 115

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 116 NLALRRARTRV 126
>gi|23131956|ref|ZP_00113741.1| hypothetical protein
           [Prochlorococcus marinus str. MIT 9313]
          Length = 133

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 2/133 (1%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           LT++V+ PD   +D  A  + + +  G +GILPGHI+L+  L++  M++  +     + +
Sbjct: 3   LTLRVLAPDQSVFDGTAEEVILPSTTGLIGILPGHISLVTALDIGVMRVRANG--AWNSI 60

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
           A+ GG  EV  D VT++ + AE  + ID   AE   E+A+  + + +  +   E  +A+ 
Sbjct: 61  ALMGGFAEVEADDVTVLVNGAELGKSIDATTAEAELEQAKAKVSQMEGQEPSTEKIKAQQ 120

Query: 124 ALRRAINRISVGK 136
              RA  R+   K
Sbjct: 121 NFNRARARVQATK 133
>gi|22796292|emb|CAD23957.1| ATP synthase epsilon subunit
           [Globularia cordifolia]
          Length = 132

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 44/131 (33%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++GILP H  L   +++  ++I    Q    WV
Sbjct: 2   LNLCVLTPNRIVWDSKVKEIILSTNSGQIGILPNHAPLATAVDIGILRIRFKDQ----WV 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPKEAQQTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797533|emb|CAD23953.1| ATP synthase epsilon subunit [Paulownia
           tomentosa]
          Length = 132

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  D++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNDEITVLVNDAEKGSDIDPQEAQKTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797157|emb|CAD23138.1| ATP synthase epsilon subunit
           [Melanophylla sp. Thulin et al. 10282]
          Length = 132

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++TI+ + AE++ DIDL  A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITILVNDAEKSSDIDLQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797135|emb|CAD23915.1| ATP synthase epsilon subunit [Manilkara
           zapota]
          Length = 132

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAIDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE  L+KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQKTLEIAEANLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|79754|pir||B26926 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - Anabaena sp
 gi|142007|gb|AAA21994.1| ATPase epsilon-subunit
          Length = 137

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 5/128 (3%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           LTV+V++PD   +D     + + +  G++GIL GH  L   L+   +++  S  +    +
Sbjct: 3   LTVRVISPDKTVWDAEVDEVILPSTTGQLGILSGHAPLSTALDTGVLRVRTSKSQNWQAI 62

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
           A+ GG  EV ED+VTI+ +  ER   I+L  A  A  +A+  L +          R+A++
Sbjct: 63  ALLGGFAEVEEDEVTILVNGGERGDTINLEEARTAYSQAQTKLNQVPAGD-----RQAQI 117

Query: 124 ALRRAINR 131
              +A  R
Sbjct: 118 QANQAFKR 125
>gi|114595|sp|P07891|ATPE_CHLRE ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|67871|pir||PWKME H+-transporting two-sector ATPase (EC 3.6.3.14)
           epsilon chain - Chlamydomonas reinhardtii chloroplast
 gi|11431|emb|CAA37928.1| ATP synthase epsilon subunit
           [Chlamydomonas reinhardtii]
 gi|28269746|tpg|DAA00924.1| TPA: CF1 ATP synthase epsilon subunit
           [Chlamydomonas reinhardtii]
          Length = 141

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 7/137 (5%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV--D 61
           L + ++TP+   ++  A  I + T  GEMG+L  H  +I  LNV  M I      G   +
Sbjct: 3   LQISILTPERPFWNGQADEIILPTETGEMGVLKNHAPIITGLNVGAMLIRGGQASGSKDE 62

Query: 62  W--VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
           W   A+ GG   V ++QVTI+A+ A  A +I+   A+ A E A+  LEKA   + + E  
Sbjct: 63  WNSYAIMGGFALVKQNQVTILANEAVSAENINPEEAKDAFETAKANLEKA---EGVKEKV 119

Query: 120 RAEVALRRAINRISVGK 136
            A  A +RA  R  V K
Sbjct: 120 EANFAYKRAKARYQVVK 136
>gi|22797145|emb|CAD23961.1| ATP synthase epsilon subunit [Myoporum
           montanum]
          Length = 132

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 41/127 (32%), Positives = 70/127 (54%), Gaps = 9/127 (7%)

Query: 8   VVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AV 65
           V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    WV  A+
Sbjct: 6   VLTPNRIVWDSEVQEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDQ----WVTMAL 61

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
            GG   +  +++T++ + AE+  DIDL  A++  + AE  L KA+  + I E   A +AL
Sbjct: 62  MGGFARIGNNEITVLVNDAEKGSDIDLQEAQQTLQIAEENLRKAEGKRQIIE---ANLAL 118

Query: 126 RRAINRI 132
           RRA  R+
Sbjct: 119 RRARTRV 125
>gi|22795923|emb|CAD23960.1| ATP synthase epsilon subunit [Buddleja
           asiatica]
          Length = 132

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++GILP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGILPNHAPIATAVDIGILRIRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L+KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDTQEAQQTLEIAEANLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|114607|sp|P07892|ATPE_SYNP7 ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|67862|pir||PWYCE H+-transporting two-sector ATPase (EC 3.6.3.14)
           epsilon chain - Synechococcus sp. (strain PCC 6301)
 gi|48025|emb|CAA29363.1| unnamed protein product [Synechococcus sp.
           PCC 6301]
 gi|436955|gb|AAB82021.1| epsilon subunit of ATP synthase
           [Synechococcus sp. PCC 7942]
          Length = 137

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 37/104 (35%), Positives = 64/104 (60%), Gaps = 2/104 (1%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           LTV+V+ PD   +D  A  + + +  G++GILPGH  L++ L+   +++ R+ +E +  +
Sbjct: 3   LTVRVIAPDRTVWDAPAQEVILPSTTGQLGILPGHAPLLSALDTGVLRV-RADKEWLA-I 60

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALE 107
           AV GG  EV  ++VT++ ++AER   IDL  A  A  +A+  L+
Sbjct: 61  AVLGGFAEVENNEVTVLVNAAERGDKIDLEEARAAFSQADERLK 104
>gi|22795905|emb|CAD23924.1| ATP synthase epsilon subunit [Camellia
           sinensis]
          Length = 132

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDFEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE  L+KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22795921|emb|CAD23956.1| ATP synthase epsilon subunit
           [Antirrhinum majus]
          Length = 132

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAIDIGILRIRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE +L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEASLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22796633|emb|CAD24000.1| ATP synthase epsilon subunit [Lonicera
           orientalis]
          Length = 132

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 41/131 (31%), Positives = 76/131 (57%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D   + I + T  G++G+LP H  +   +++  ++I  + Q    WV
Sbjct: 2   LNLCVLTPNRIVWDSEVNEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WV 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ ++AE++ DID + A++  E AE +L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNNAEKSSDIDPHEAQQTLEIAEASLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797137|emb|CAD23933.1| ATP synthase epsilon subunit
           [Plocosperma buxifolium]
          Length = 132

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   AE+  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAEQTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|17548033|ref|NP_521435.1| PROBABLE ATP SYNTHASE EPSILON CHAIN
           PROTEIN [Ralstonia solanacearum]
 gi|20137359|sp|Q8XU77|ATE1_RALSO ATP synthase epsilon chain 1 (ATP
           synthase F1 sector epsilon subunit 1)
 gi|17430339|emb|CAD17104.1| PROBABLE ATP SYNTHASE EPSILON CHAIN
           PROTEIN [Ralstonia solanacearum]
          Length = 137

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 40/107 (37%), Positives = 60/107 (55%), Gaps = 2/107 (1%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           MA + V VV+ +   +   A  + +    GE+GILPGH  LI  +    ++I    + G 
Sbjct: 1   MATIHVDVVSAEQEIFSGDAKFVALPGEAGELGILPGHTPLITRIKPGAVRIET--EAGE 58

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALE 107
           ++V V GGI+EV    VT++AD+A R  D+D  +A  AK  AE AL+
Sbjct: 59  EFVFVAGGILEVQPKHVTVLADTAIRGHDLDEAKANEAKRAAEEALQ 105
>gi|29829422|ref|NP_824056.1| putative ATP synthase epsilon chain
           [Streptomyces avermitilis MA-4680]
 gi|29606529|dbj|BAC70591.1| putative ATP synthase epsilon chain
           [Streptomyces avermitilis MA-4680]
          Length = 124

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 8/125 (6%)

Query: 2   AQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVD 61
           A+L V++V  D   +   A+L+  RT  G++G++PGH  L+  L    + I  S  E V 
Sbjct: 3   AELHVELVAADRQVWSGEATLVVARTTSGDIGVMPGHQPLLGVLESGPVTIRTSDGETV- 61

Query: 62  WVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             AV+GG I   +++++++A+ AE A +ID        +RAER LE+A+   +    RRA
Sbjct: 62  VAAVHGGFISFADNKLSLLAEIAELADEID-------AQRAERELERAKAEGDATAERRA 114

Query: 122 EVALR 126
           +V LR
Sbjct: 115 DVRLR 119
>gi|22797501|emb|CAD23911.1| ATP synthase epsilon subunit
           [Pentaphylax euryoides]
          Length = 132

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRFNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE  L+KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797523|emb|CAD23932.1| ATP synthase epsilon subunit
           [Pyrenacantha grandifolia]
          Length = 132

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T +G++GILP H  +   +++  +KI  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIVLSTNNGQIGILPNHAPIATAVDIGILKIRLNSQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   + ++++TI+ + AE++ DID   A +  E AE  L +A+  +   E   A
Sbjct: 58  TMALMGGFARIGKNEITILVNDAEKSSDIDPQEAHKTLEIAEANLRRAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22796607|emb|CAD23931.1| ATP synthase epsilon subunit [Icacina
           senegalensis]
          Length = 132

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T +G++G+LP H  +   +++  +KI  + Q    W+
Sbjct: 2   LNLCVLTPNQIVWDSEVKEIILSTNNGQIGVLPNHAPIATAVDIGILKIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   + ++++TI+ + AE++ DID   A++  E AE  L +A+  +   E   A
Sbjct: 58  TMALMGGFARIGKNEITILVNDAEKSSDIDPQEAQKTLEIAEANLRRAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|114608|sp|P26533|ATPE_SYNY3 ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|47517|emb|CAA41138.1| ATPase subunit epsilon [Synechocystis sp.
           PCC 6803]
          Length = 136

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 6/131 (4%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW- 62
           LTV+V+TPD + +D     + + +  G++GIL  H  L+  L +  M++    + G DW 
Sbjct: 3   LTVRVITPDKVVWDEEVQELILPSTTGQLGILSNHAPLLTALEIGVMRV----RPGKDWQ 58

Query: 63  -VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            +AV GG  EV  ++V ++ + AE    ID   A +A   A+ ALE+A   ++     +A
Sbjct: 59  NIAVMGGFAEVENNEVKVLVNGAELGTTIDAESARQAYTAAQGALEEANRGEDKPNQLKA 118

Query: 122 EVALRRAINRI 132
               ++A  R+
Sbjct: 119 SNNYKKARARL 129
>gi|22795887|emb|CAD22403.1| ATP synthase epsilon chain [Clethra
           alnifolia]
 gi|22795901|emb|CAD23906.1| ATP synthase epsilon subunit
           [Fouquieria diguetii]
 gi|22797511|emb|CAD23917.1| ATP synthase epsilon subunit [Sladenia
           celastrifolia]
 gi|22797824|emb|CAD23922.1| ATP synthase epsilon subunit
           [Ternstroemia gymnanthera]
          Length = 132

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE  L+KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|336669|gb|AAA84147.1| CF1/CF0 ATPase epsilon subunit
 gi|225837|prf||1314297A H ATPase epsilon
          Length = 141

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 7/137 (5%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV--D 61
           L + ++TP+   ++  A  I + T  GEMG+L  H  +I  LNV  M I      G   +
Sbjct: 3   LQISILTPERPFWNGQADEIILPTETGEMGVLKNHAPIITGLNVGAMLIRGGQASGSKDE 62

Query: 62  W--VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
           W   A+ GG   V ++QVTI+A+ A  A +I+   A+ A E A+  LEKA   + + E  
Sbjct: 63  WNSYAIMGGFALVKQNQVTILANEAVSAENINPEEAKDAFETAKANLEKA---EGVKEKV 119

Query: 120 RAEVALRRAINRISVGK 136
            A  A +RA  R  V K
Sbjct: 120 VANFAYKRAKARYQVVK 136
>gi|7524660|ref|NP_042414.1| ATP synthase CF1 epsilon chain [Pinus
           thunbergii]
 gi|1168592|sp|P41623|ATPE_PINTH ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|7436146|pir||T07493 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - Japanese black pine
           chloroplast
 gi|1262654|dbj|BAA04371.1| H+-ATPase epsilon subunit [Pinus
           thunbergii]
          Length = 137

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 40/129 (31%), Positives = 76/129 (58%), Gaps = 5/129 (3%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L ++V++P+ + +D     I + T  G++G+LP H +L+A +++  MKI  + Q     +
Sbjct: 3   LNLRVLSPNRVIWDSEVKEIILSTNSGQIGVLPNHASLVAAVDIGVMKIRLNGQWST--M 60

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
           A+ GG  +++ D++TI+ ++AER  DID   A+     A+  L +A+  +   E   A++
Sbjct: 61  AMMGGFAKIDSDRITILVNNAERDVDIDPREAQENFRIAKADLARAEGKRQAIE---ADL 117

Query: 124 ALRRAINRI 132
           AL+RA  R+
Sbjct: 118 ALKRARTRL 126
>gi|22796603|emb|CAD23910.1| ATP synthase epsilon subunit [Myrsine
           africana]
          Length = 132

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSGVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L+KA+  + + E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLETAEANLKKAEGKRQLIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797840|emb|CAD23137.1| ATP synthase epsilon subunit
           [Tetrachondra patagonica]
          Length = 132

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNXIIWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797513|emb|CAD23919.1| ATP synthase epsilon subunit
           [Pterostyrax hispidus]
          Length = 132

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L+KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22795891|emb|CAD22410.1| ATP synthase epsilon chain [Byblis
           liniflora]
          Length = 132

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 41/131 (31%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVQEIILSTNSGQIGVLPNHAPIATAVDIGILRIRFKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  MMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQKTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22795899|emb|CAD23905.1| ATP synthase epsilon subunit [Diospyros
           kaki]
          Length = 132

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  + +TI+ + AE++ DID   A++  E AE  L+KA+  + I E   A
Sbjct: 58  RMALMGGFARIGNNDITILVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22796631|emb|CAD23990.1| ATP synthase epsilon subunit
           [Helianthus annuus]
          Length = 132

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE AL KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEAALRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22795925|emb|CAD23970.1| ATP synthase epsilon subunit [Brunia
           albiflora]
          Length = 132

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           LT+ V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LTLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797497|emb|CAD22409.1| ATP synthase epsilon chain [Stilbe
           ericoides]
          Length = 132

 Score = 60.1 bits (144), Expect = 7e-09
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++GILP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGILPNHAPIATAVDIGILRIRFKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDRQEAQQTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797527|emb|CAD23946.1| ATP synthase epsilon subunit
           [Dipentodon sinicus]
          Length = 132

 Score = 60.1 bits (144), Expect = 7e-09
 Identities = 41/131 (31%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEAYLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|19703699|ref|NP_603261.1| ATP synthase epsilon chain, sodium ion
           specific [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|22095472|sp|Q8RGE3|ATPE_FUSNN ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|19713823|gb|AAL94560.1| ATP synthase epsilon chain, sodium ion
           specific [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 134

 Score = 60.1 bits (144), Expect = 7e-09
 Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 3/132 (2%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M    V VVT      +  A  + +RT +G++GILP H   +A L++ +M+I   +++  
Sbjct: 1   MPSFDVSVVTQVKKILEQEAGYLRLRTSEGDIGILPNHAPFVAELSMGKMEIESPNKDRR 60

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           D   ++GG +E++++Q T++AD       ID+   +   E  ++ LEK  T +   E R+
Sbjct: 61  DIYFLSGGFLEISDNQATVIADEVFPIEKIDVESEQALVENLKKELEKVSTEE---EKRK 117

Query: 121 AEVALRRAINRI 132
            +  ++ ++ +I
Sbjct: 118 LQKKIKISLAKI 129
>gi|22795943|emb|CAD23991.1| ATP synthase epsilon subunit [Acicarpha
           tribuloides]
 gi|22795945|emb|CAD23992.1| ATP synthase epsilon subunit [Boopis
           graminea]
          Length = 132

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE AL KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSGDIDPQEAQQTLEIAEAALRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22796635|emb|CAD24003.1| ATP synthase epsilon subunit [Linnaea
           borealis]
          Length = 132

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 40/131 (30%), Positives = 74/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ ++AE++ DID   A++  E AE +L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNNAEKSSDIDPQEAQQTLEIAEASLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22796601|emb|CAD23908.1| ATP synthase epsilon subunit
           [Lissocarpa guianensis]
          Length = 132

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  + +T++ + AE++ DID   A++  E AE  L+KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNDITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|728927|sp|P41171|ATPE_THIFE ATP synthase epsilon chain (ATP
          synthase F1 sector epsilon subunit)
 gi|154675|gb|AAA53128.1| F1F0-ATPase epsilon subunit
          Length = 141

 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 36/88 (40%), Positives = 54/88 (60%), Gaps = 2/88 (2%)

Query: 4  LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
          + V+VV+ +G  Y   A ++      GE+GILP H  L+  L   +++I   H    +++
Sbjct: 5  IDVRVVSAEGSIYAGVADMVVAPGEMGELGILPRHAPLLTGLRPGELRI--IHGAETEYL 62

Query: 64 AVNGGIIEVNEDQVTIVADSAERARDID 91
           VNGGI+E+  D VT++ADSAERA DID
Sbjct: 63 FVNGGILEIQPDMVTVLADSAERATDID 90
>gi|13518422|ref|NP_084782.1| ATP synthase CF1 epsilon chain [Lotus
           corniculatus var. japonicus]
 gi|20137452|sp|Q9BBT9|ATPE_LOTJA ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|13358963|dbj|BAB33180.1| ATPase epsilon subunit [Lotus
           corniculatus var. japonicus]
          Length = 133

 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++GILP H  L   L++  ++I  + Q    W+
Sbjct: 3   LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQ----WL 58

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L++A+  +   E   A
Sbjct: 59  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIE---A 115

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 116 NLALRRARTRV 126
>gi|22797535|emb|CAD23954.1| ATP synthase epsilon subunit [Sesamum
           indicum]
          Length = 132

 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    WV
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLTDQ----WV 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDAQEAQQTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +AL+RA  R+
Sbjct: 115 NLALQRARTRV 125
>gi|22797509|emb|CAD23916.1| ATP synthase epsilon subunit
           [Sarracenia purpurea]
          Length = 132

 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 40/131 (30%), Positives = 74/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L +  +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  ++Q    W+
Sbjct: 2   LNLCXLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNNQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE  L+KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22796617|emb|CAD23952.1| ATP synthase epsilon subunit
           [Lindenbergia sp. Thulin 8079]
          Length = 132

 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 41/131 (31%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797529|emb|CAD23947.1| ATP synthase epsilon subunit
           [Streptocarpus caulescens]
          Length = 132

 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++GILP H  +   +++  ++I    Q    WV
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILCTTSGQIGILPNHAPIATAVDIGILRIRLKDQ----WV 57

Query: 64  A--VNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
              + GG   +  +Q+T++ + AE+  DI+   A++ +E AE    KA+  + I E   A
Sbjct: 58  TMVMMGGFARIGNNQITVLVNDAEKGSDINPEEAKQTRELAEANFRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797539|emb|CAD23959.1| ATP synthase epsilon subunit
           [Schlegelia parviflora]
          Length = 132

 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 41/131 (31%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22796629|emb|CAD23986.1| ATP synthase epsilon subunit [Helwingia
           japonica]
          Length = 129

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 41/127 (32%), Positives = 70/127 (54%), Gaps = 9/127 (7%)

Query: 8   VVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AV 65
           V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  S Q    WV  A+
Sbjct: 3   VLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLSDQ----WVTMAL 58

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
            GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A +AL
Sbjct: 59  MGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---ANLAL 115

Query: 126 RRAINRI 132
           RRA  R+
Sbjct: 116 RRARTRV 122
>gi|22796625|emb|CAD23969.1| ATP synthase epsilon subunit [Montinia
           caryophyllacea]
          Length = 132

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 41/131 (31%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++TI+ + AE+  DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITILVNDAEKGSDIDPQEAQQTLETAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22796615|emb|CAD23948.1| ATP synthase epsilon subunit [Lamium
           album]
          Length = 132

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 41/131 (31%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPVATAVDIGILRIRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRKIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|32490758|ref|NP_871012.1| atpC [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31339980|sp|Q8D3J2|ATPE_WIGBR ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|25165964|dbj|BAC24155.1| atpC [Wigglesworthia brevipalpis]
          Length = 138

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 6/134 (4%)

Query: 3   QLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW 62
           QLT  V++ +   + +      +   +G +GILPGH  LI  +    + I  S +   ++
Sbjct: 7   QLT--VISAENFIFSNLVKKSNITGSEGNLGILPGHAPLITKIKPGLIHI-ISSKNIEEY 63

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
           + ++GGI+E+N + VT++AD+A R ++ID  +A  +K+ AE  + K++      E  RA 
Sbjct: 64  IYLSGGILEINSNVVTVLADTAIRGKEIDEKKAIESKKNAEELILKSKERH---EYIRAV 120

Query: 123 VALRRAINRISVGK 136
           + L +AI ++ V K
Sbjct: 121 IELSKAIAKLRVCK 134
>gi|22797543|emb|CAD23963.1| ATP synthase epsilon subunit
           [Polypremum procumbens]
          Length = 132

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 41/131 (31%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIIWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A+   E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQETLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|21244373|ref|NP_643955.1| ATP synthase epsilon chain
           [Xanthomonas axonopodis pv. citri str. 306]
 gi|24211492|sp|Q8PGG8|ATPE_XANAC ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|21110031|gb|AAM38491.1| ATP synthase epsilon chain [Xanthomonas
           axonopodis pv. citri str. 306]
          Length = 140

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 40/120 (33%), Positives = 66/120 (54%), Gaps = 1/120 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M+ +   +V+ +   +   A+L+      GE+GI P H  LI  L   ++ +  ++ E +
Sbjct: 1   MSTIRCDIVSAEKEIFHGEATLVVATGELGELGIAPKHAPLITRLKPGKVVVTTANGEQL 60

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           D+ A++GGI+EV    VTI+ D+A RA+DID     + KE AER L     T ++ E +R
Sbjct: 61  DF-AISGGILEVQPQVVTILVDTAVRAQDIDEAAVRKVKEEAERLLANRGNTVDVAEAQR 119
>gi|22797568|emb|CAD23136.1| ATP synthase epsilon subunit
           [Proboscidea fragrans]
          Length = 132

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 41/131 (31%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRL 125
>gi|22795907|emb|CAD23927.1| ATP synthase epsilon subunit [Borago
           officinalis]
          Length = 135

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 43/131 (32%), Positives = 70/131 (52%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    WV
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLIDQ----WV 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   V  +++T++ + AER  DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARVGNNEITVLVNDAERGSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797141|emb|CAD23950.1| ATP synthase epsilon subunit [Olea
           europaea]
          Length = 132

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILYTNSGQIGVLPNHAPIATAVDIGILRIRFKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++ I+ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEIIILVNDAEKGSDIDPQEAQKTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797537|emb|CAD23955.1| ATP synthase epsilon subunit [Phryma
           leptostachya]
          Length = 132

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 40/131 (30%), Positives = 70/131 (52%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDQ----WL 57

Query: 64  AVN--GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            +   GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMTLMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22795949|emb|CAD24002.1| ATP synthase epsilon subunit [Dipsacus
           sativus]
          Length = 132

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 40/131 (30%), Positives = 74/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +      I + T  G++G+LP H  +   +++  ++I  + Q    WV
Sbjct: 2   LNLCVLTPNRIVWXSXVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WV 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ ++AE++ DID   A++  E AE +L+KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNNAEKSSDIDPQEAQQTLEIAEASLKKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797830|emb|CAD23964.1| ATP synthase epsilon subunit [Verbena
           rigida]
          Length = 132

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 40/131 (30%), Positives = 70/131 (52%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDQ----WL 57

Query: 64  AVN--GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            +   GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMTLMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|23123255|ref|ZP_00105390.1| hypothetical protein
           [Prochlorococcus marinus subsp. pastoris str. CCMP1378]
          Length = 134

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 35/135 (25%), Positives = 76/135 (55%), Gaps = 6/135 (4%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW- 62
           ++++V+ P+   Y+  A  + + +  G++G+LPGHI+L+  +++  +++  + +    W 
Sbjct: 3   ISLKVLAPNQNVYEGDAEEVILPSTTGQIGVLPGHISLVTAIDIGVLRLRMNSK----WK 58

Query: 63  -VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            +A+ GG  E+  D+V ++ +SAE   +I++  AE A ++A+ A+ K    +   E  +A
Sbjct: 59  SIALMGGFAEIESDEVIVLVNSAEIGSEINIQNAEDALKKAKSAISKFPENEKSSEKIKA 118

Query: 122 EVALRRAINRISVGK 136
              + +A  RI   K
Sbjct: 119 LNEVSKAEARIQASK 133
>gi|22796637|emb|CAD24004.1| ATP synthase epsilon subunit [Morina
           longifolia]
          Length = 129

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 39/127 (30%), Positives = 72/127 (55%), Gaps = 9/127 (7%)

Query: 8   VVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AV 65
           V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+
Sbjct: 3   VLTPNRIVWDSEVKEILLSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMAL 58

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
            GG   +  +++T++ ++AE++ DID   A++  E AE +L KA+  +   E   A +AL
Sbjct: 59  MGGFARIGNNEITVLVNNAEKSSDIDPQEAQQTLEIAEASLRKAEGKRQTIE---ANLAL 115

Query: 126 RRAINRI 132
           RRA  R+
Sbjct: 116 RRARTRV 122
>gi|22797139|emb|CAD23936.1| ATP synthase epsilon subunit [Oncotheca
           balansae]
          Length = 131

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++GILP H  +   +++  ++I  + Q    W+
Sbjct: 1   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGILPNHAPIATAVDIGILRIRLNGQ----WL 56

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A
Sbjct: 57  TMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 113

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 114 NLALRRARTRV 124
>gi|21230030|ref|NP_635947.1| ATP synthase epsilon chain
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|24211490|sp|Q8PCZ4|ATPE_XANCP ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|21111550|gb|AAM39871.1| ATP synthase epsilon chain [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
          Length = 140

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M+ +   +V+ +   +   A+L+      GE+GI P H  LI  L   ++ +  +  E +
Sbjct: 1   MSTIRCDIVSAEQEIFRGEATLVVATGELGELGIAPKHAPLITRLKPGKVVVTTASGEQL 60

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
           D+ A++GGI+EV    VT++ D+A RA+DID     +AKE AER L     T ++++ +R
Sbjct: 61  DF-AISGGILEVQPQVVTVLVDTAIRAQDIDEAAVRKAKEEAERLLANRGDTVDVEQAQR 119
>gi|22795947|emb|CAD24001.1| ATP synthase epsilon subunit [Diervilla
           rivularis]
          Length = 132

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ ++AE++ DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNNAEKSSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|1703741|sp|P50010|ATPE_PRODI ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|285203|pir||B42697 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - Prochloron didemni
 gi|150559|gb|AAA25557.1| ATP synthase epsilon subunit
          Length = 136

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 38/127 (29%), Positives = 67/127 (51%), Gaps = 6/127 (4%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW- 62
           LT++V+TPD   +D     I + +  G++G+L GH  L+  L+   M++    + G DW 
Sbjct: 3   LTLRVITPDKTVWDDSVEEIVLPSTTGQVGVLTGHAPLLTALDTGVMRV----RPGKDWQ 58

Query: 63  -VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            +A+ GG  EV  ++V ++ + AE    ID   A    ++AE+ L +A    N  E+ +A
Sbjct: 59  AIALMGGFAEVENNEVKVLVNGAEVGDSIDKETARTEFQQAEQNLARANQGDNRQELIQA 118

Query: 122 EVALRRA 128
               ++A
Sbjct: 119 TQEFKKA 125
>gi|22795491|emb|CAD22407.1| ATP synthase epsilon chain [Androya
           decaryi]
          Length = 130

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 40/127 (31%), Positives = 69/127 (53%), Gaps = 9/127 (7%)

Query: 8   VVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AV 65
           V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+  A+
Sbjct: 4   VLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDQ----WLTMAL 59

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
            GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A +AL
Sbjct: 60  MGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQIIE---ANLAL 116

Query: 126 RRAINRI 132
           RRA  R+
Sbjct: 117 RRARTRV 123
>gi|22796611|emb|CAD23941.1| ATP synthase epsilon subunit [Luculia
           gratissima]
          Length = 131

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L+KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22711897|ref|NP_683809.1| ATP synthase CF1 epsilon chain
           [Chaetosphaeridium globosum]
 gi|25008157|sp|Q8M9X7|ATPE_CHAGL ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|22416901|gb|AAM96501.1| CF1 epsilon subunit of ATP synthase
           [Chaetosphaeridium globosum]
          Length = 136

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 43/131 (32%), Positives = 74/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW- 62
           L ++V+ P+ I ++  A  I + T  G++GILP H  L+  L++  M+I  + Q    W 
Sbjct: 3   LNIRVMAPNRIVWNSEAQEIILSTNSGQIGILPNHAPLLTALDIGIMRILVNGQ----WT 58

Query: 63  -VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            +A+ GG   V+ +Q+TI+ + AE+A +ID   AE   E A++ L  A+  + I E   A
Sbjct: 59  SMALMGGFALVDNNQLTILVNEAEKASEIDPKEAENNFELAKQNLAAAEGRKQIIE---A 115

Query: 122 EVALRRAINRI 132
            ++ +RA  R+
Sbjct: 116 NLSFQRAKARL 126
>gi|22797147|emb|CAD23976.1| ATP synthase epsilon subunit
           [Paracryphia alticola]
 gi|22797545|emb|CAD23975.1| ATP synthase epsilon subunit [Quintinia
           verdonii]
          Length = 132

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22796595|emb|CAD23901.1| ATP synthase epsilon subunit [Hydrangea
           aspera]
          Length = 130

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 41/135 (30%), Positives = 72/135 (52%), Gaps = 9/135 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRISVGK 136
            +ALRRA  R+   K
Sbjct: 115 NLALRRARTRVEAIK 129
>gi|17367084|sp|Q9TKI6|ATPE_MEDSA ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|5679310|gb|AAD46915.1|AF163770_2 ATP synthase epsilon subunit
           [Medicago sativa]
          Length = 137

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 4/129 (3%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+   +D     I + T  G++G+L  H  +   L++  +KI  ++Q+ V  +
Sbjct: 3   LNLCVLTPNRTVWDSEVKEIILSTNSGQIGVLKNHAPIATALDIGILKIRLTNQQWVT-M 61

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
           A+ GG   +  +++TI+ + AE++ DID   A++  + AE  L KA+  +   E   A +
Sbjct: 62  ALMGGFARIGNNEITILVNDAEKSIDIDPQEAQQTLKIAEANLNKAEGKRQTIE---ANL 118

Query: 124 ALRRAINRI 132
           ALRRA  R+
Sbjct: 119 ALRRARTRV 127
>gi|22795919|emb|CAD23951.1| ATP synthase epsilon subunit
           [Cyclocheilon somaliense]
          Length = 132

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 40/131 (30%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPVATAVDIGILRIRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            ++LRRA  R+
Sbjct: 115 NLSLRRARTRV 125
>gi|22795933|emb|CAD23974.1| ATP synthase epsilon subunit
           [Escallonia rubra]
          Length = 132

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSSDIDAQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22795497|emb|CAD23935.1| ATP synthase epsilon subunit [Aucuba
           japonica]
 gi|22796284|emb|CAD22406.1| ATP synthase epsilon chain [Garrya
           elliptica]
          Length = 132

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    WV
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WV 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++TI+ + AE+  DID   A    E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITILVNDAEKGSDIDPQEARETLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797557|emb|CAD23998.1| ATP synthase epsilon subunit [Stylidium
           bulbiferum]
          Length = 132

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 40/131 (30%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNGQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A +  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSSDIDPQEARKTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRAKTRV 125
>gi|7524903|ref|NP_045905.1| ATP synthase CF1 epsilon chain
           [Chlorella vulgaris]
 gi|416682|sp|P32979|ATPE_CHLVU ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|7436145|pir||T07333 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - Chlorella vulgaris chloroplast
 gi|285705|dbj|BAA01768.1| ATPase F1 epsilon subunit ['Chlorella'
           ellipsoidea]
 gi|2224497|dbj|BAA57981.1| ATP synthase CF1 epsilon chain
           [Chlorella vulgaris]
          Length = 134

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 9/136 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW- 62
           L V ++TPD I ++  A  I + T  G+MG+L  H  LI  L++    I RS+    +W 
Sbjct: 3   LQVCIMTPDRIFWNDQADEIILPTNTGQMGVLTNHAPLITALDIGVTLI-RSNS---NWN 58

Query: 63  -VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            VA+ GG   V ++QVTI+ + AE A+ I ++ AE A + A+  LE++Q  +   E   A
Sbjct: 59  PVALMGGFALVKQNQVTILVNEAESAQTIGVDEAEIAFQEAKTKLEQSQGEKQRVE---A 115

Query: 122 EVALRRAINRISVGKK 137
               +RA  R  V K+
Sbjct: 116 TFVFKRARARYQVVKQ 131
>gi|16762462|ref|NP_458079.1| ATP synthase epsilon subunit
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|16767148|ref|NP_462763.1| membrane-bound ATP synthase, F1
           sector, epsilon-subunit [Salmonella typhimurium LT2]
 gi|29143950|ref|NP_807292.1| ATP synthase epsilon subunit
           [Salmonella enterica subsp. enterica serovar Typhi Ty2]
 gi|20137552|sp|Q9RFL2|ATPE_SALTY ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|25290501|pir||AG0954 ATP synthase epsilon chain [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16422438|gb|AAL22722.1| membrane-bound ATP synthase, F1 sector,
           epsilon-subunit [Salmonella typhimurium LT2]
 gi|16504767|emb|CAD03131.1| ATP synthase epsilon subunit
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29139586|gb|AAO71152.1| ATP synthase epsilon subunit [Salmonella
           enterica subsp. enterica serovar Typhi Ty2]
          Length = 139

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 4/129 (3%)

Query: 6   VQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWVAV 65
           + VV+ +   +      I V   +GE+GI PGH  L+  +    ++I + H    +++ +
Sbjct: 7   LDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHE-EFIYL 65

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
           +GGI+EV    VT++AD+A R +D+D  RA  AK +AE   E  +++    +  +A   L
Sbjct: 66  SGGILEVQPGSVTVLADTAIRGQDLDEARALEAKRKAE---EHIKSSHGDVDYAQASAEL 122

Query: 126 RRAINRISV 134
            +AI ++ V
Sbjct: 123 AKAIAKLRV 131
>gi|22795897|emb|CAD23899.1| ATP synthase epsilon subunit [Cornus
           mas]
          Length = 132

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 40/131 (30%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22795493|emb|CAD23903.1| ATP synthase epsilon subunit [Actinidia
           kolomikta]
          Length = 132

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW- 62
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W 
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 63  -VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            +A+  G   +  +++T++ + AE++ DID   A++  E AE  L+KA+  + I E   A
Sbjct: 58  TLALMDGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22796627|emb|CAD23985.1| ATP synthase epsilon subunit [Ilex sp.
           Erixon and Bremer 52]
          Length = 132

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22795917|emb|CAD23943.1| ATP synthase epsilon subunit [Avicennia
           marina]
          Length = 132

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPVATAVDIGILRIRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  + +T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNGITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797149|emb|CAD23977.1| ATP synthase epsilon subunit [Polyosma
           cunninghamii]
          Length = 132

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LKLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22796623|emb|CAD23968.1| ATP synthase epsilon subunit [Kaliphora
           madagascariensis]
          Length = 132

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++GILP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILYTTSGQIGILPNHAPIATAVDIGILRIRLNGQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++TI+ + AE+   ID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNKITILVNDAEKGSGIDPQEAQQTLETAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797820|emb|CAD22405.1| ATP synthase epsilon chain
           [Tetramerista sp. Coode 7925]
          Length = 133

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 39/126 (30%), Positives = 71/126 (55%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE++ DID   A++  E AE  L+KA+  + I E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQIIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|30468213|ref|NP_849100.1| ATP synthase CF1 epsilon chain
           [Cyanidioschyzon merolae]
 gi|30409313|dbj|BAC76262.1| ATP synthase CF1 epsilon chain
           [Cyanidioschyzon merolae]
          Length = 131

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 6/132 (4%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           + ++++TPDG  +D     + + +  G++GIL  H  L+  L++  M+   +      WV
Sbjct: 1   MKMKIITPDGYVWDREIEEVILPSSTGQLGILAHHAPLLTALDIGVMRAKTAQ----GWV 56

Query: 64  AVN--GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
           A+   GG  EV  +Q+TI+ + A+ A +IDL  A++ + +A   L++A T     E R+ 
Sbjct: 57  ALVLFGGFAEVLNNQITILVNGAQEAHEIDLQHAQQEEAKALEQLQQAATPTAQIEARQN 116

Query: 122 EVALRRAINRIS 133
               R  +  +S
Sbjct: 117 LAKWRARVQAVS 128
>gi|14715607|gb|AAK72444.1|AF283808_9 ATP synthase epsilon subunit
           [Clostridium pasteurianum]
          Length = 107

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 35/105 (33%), Positives = 62/105 (58%), Gaps = 7/105 (6%)

Query: 2   AQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGH---INLIAPLNVHQMKINRSHQE 58
           +++ + ++TP    Y+   S +   T  G +GILP H   I L+ P  V ++K +   ++
Sbjct: 3   SKIKLNILTPMEKFYEGDVSEVNTSTTSGGIGILPQHSPFIGLLIP-TVTKLKFDDGSEK 61

Query: 59  GVDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAE 103
               +  + GI++V ++++ I+ D AE   DID++RAE+AKERAE
Sbjct: 62  S---LFTSTGILQVTKEEIKIIVDDAEWPEDIDIDRAEQAKERAE 103
>gi|22797143|emb|CAD23958.1| ATP synthase epsilon subunit [Plantago
           argentea]
          Length = 132

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 40/131 (30%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  +++    Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQVGVLPNHAPIATAVDIGILRMRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A +  E AE  L+KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDSKEALQTLEIAEENLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|11465963|ref|NP_054505.1| ATP synthase CF1 epsilon chain
           [Nicotiana tabacum]
 gi|114610|sp|P00834|ATPE_TOBAC ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|67866|pir||PWNTE H+-transporting two-sector ATPase (EC 3.6.3.14)
           epsilon chain - common tobacco chloroplast
 gi|11839|emb|CAA77359.1| ATPase epsilon subunit [Nicotiana tabacum]
 gi|552955|gb|AAA84677.1| ATPase epsilon subunit
 gi|225207|prf||1211235AM ATPase epsilon
          Length = 133

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++GILP H  +   +++  ++I  + Q    W+
Sbjct: 3   LNLSVLTPNRIVWDSEVEEIVLSTNSGQIGILPNHAPIATAVDIGILRIRLNDQ----WL 58

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  ++KA+  +   E   A
Sbjct: 59  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLELAEANVKKAEGRRQKIE---A 115

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 116 NLALRRARTRV 126
>gi|22796613|emb|CAD23944.1| ATP synthase epsilon subunit [Jacaranda
           mimosifolia]
          Length = 132

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 40/131 (30%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I ++     I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRIVWNSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|18860317|ref|NP_569635.1| ATP synthase CF1 epsilon chain
           [Psilotum nudum]
 gi|22653658|sp|Q8WI12|ATPE_PSINU ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|18389470|dbj|BAB84222.1| ATP synthase epsilon subunit [Psilotum
           nudum]
          Length = 133

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 5/129 (3%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L ++V+ P+ I ++     I + T +G+MGILP H  L+  L++  MKI     E    +
Sbjct: 2   LNLRVIAPNRIVWNSEVREIILSTNNGQMGILPNHAPLLTALDIGVMKIRID--ERWSNM 59

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
           A+ GG   ++ +Q+TI+ + AE++ +ID   A+   ++A+  L +A+  +   E   A +
Sbjct: 60  ALMGGFATIDNNQITILVNEAEKSSEIDPEEAQETFQKAQANLTRAEGKRKTIE---AHL 116

Query: 124 ALRRAINRI 132
           A +RA  R+
Sbjct: 117 AFKRAKARL 125
>gi|22797531|emb|CAD23949.1| ATP synthase epsilon subunit
           [Pinguicula sp. Erixon and Bremer 54]
          Length = 129

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 40/127 (31%), Positives = 69/127 (53%), Gaps = 9/127 (7%)

Query: 8   VVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AV 65
           V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I    +    WV  A+
Sbjct: 3   VLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDR----WVTMAL 58

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
            GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A +AL
Sbjct: 59  MGGFARIGNNEITVLVNDAEKGNDIDPQEAQQTLEIAEANLTKAEGKRQIIE---ANLAL 115

Query: 126 RRAINRI 132
           RRA  R+
Sbjct: 116 RRARTRV 122
>gi|22797517|emb|CAD23921.1| ATP synthase epsilon subunit [Symplocos
           bogotensis]
          Length = 126

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 39/126 (30%), Positives = 71/126 (55%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW--VAVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W  +A+ 
Sbjct: 1   LTPNRIVWDSEVKEIVLSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTLALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE++ DID   A++  E AE  L+KA+  + I E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQIIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|22797519|emb|CAD23923.1| ATP synthase epsilon subunit
           [Pelliciera rhizophorae]
          Length = 126

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 39/126 (30%), Positives = 71/126 (55%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE++ DID   A++  E AE  L+KA+  + I E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKSSDIDSQEAQQTLEIAETNLKKAEGKRQIIE---ATLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|22797133|emb|CAD23909.1| ATP synthase epsilon subunit
           [Marcgravia sp. Anderberg s.n.]
          Length = 126

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 39/126 (30%), Positives = 71/126 (55%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE++ DID   A++  E AE  L+KA+  + I E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQIIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|22795889|emb|CAD22404.1| ATP synthase epsilon chain [Cyrilla
           racemiflora]
          Length = 125

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 39/125 (31%), Positives = 70/125 (55%), Gaps = 9/125 (7%)

Query: 10  TPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW--VAVNG 67
           TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W  +A+ G
Sbjct: 1   TPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTIALMG 56

Query: 68  GIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALRR 127
           G   +  +++T++ + AE++ DID   A++  E AE  L+KA+  + I E   A +ALRR
Sbjct: 57  GFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQIIE---ANLALRR 113

Query: 128 AINRI 132
           A  R+
Sbjct: 114 ARTRV 118
>gi|22796619|emb|CAD23965.1| ATP synthase epsilon subunit [Ipomoea
           batatas]
          Length = 132

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++GILP H  +   +++  ++I  + Q    WV
Sbjct: 2   LKLCVLTPNRIVWDSEVKEIILSTNSGQIGILPNHAPIATAVDIGILRIRLNDQ----WV 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE    KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDSLEAQQTLEIAEANFRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|114598|sp|P07138|ATPE_IPOBA ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|82301|pir||B26850 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - sweet potato chloroplast
 gi|58337|emb|CAA29394.1| unnamed protein product [Ipomoea batatas]
          Length = 133

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++GILP H  +   +++  ++I  + Q    WV
Sbjct: 3   LKLCVLTPNRIVWDSEVKEIILSTNSGQIGILPNHAPIATAVDIGILRIRLNDQ----WV 58

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE    KA+  +   E   A
Sbjct: 59  TMALMGGFARIGNNEITVLVNDAEKGSDIDSLEAQQTLEIAEANFRKAEGKRQTIE---A 115

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 116 NLALRRARTRV 126
>gi|22797525|emb|CAD23945.1| ATP synthase epsilon subunit
           [Peltanthera floribunda]
          Length = 126

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I    Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE+  DID   A++  E AE  L KAQ  + I E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAQGKRQIIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|22795941|emb|CAD23989.1| ATP synthase epsilon subunit
           [Argophyllum sp. Telford 5462]
          Length = 129

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 39/127 (30%), Positives = 70/127 (54%), Gaps = 9/127 (7%)

Query: 8   VVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AV 65
           V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+
Sbjct: 3   VLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMAL 58

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
            GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A +AL
Sbjct: 59  MGGFARIGNNEITVLVNDAEKSGDIDPQEAQQTLEIAEANLRKAEGKRQTIE---ANLAL 115

Query: 126 RRAINRI 132
           RRA  R+
Sbjct: 116 RRAKTRV 122
>gi|28195664|gb|AAO27798.1| ATP synthase epsilon subunit [Phoenix
           dactylifera]
          Length = 123

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 9/127 (7%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW- 62
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W 
Sbjct: 3   LNLCVLTPNRIIWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGLLRIRLNDQ----WL 58

Query: 63  -VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            VA+ GG   +  + +TI+ + AE + DID   A++A E AE  L +A+  +   E   A
Sbjct: 59  TVALMGGFARIGNNDITILGNDAEMSTDIDPQEAQQALEIAEANLSRAEGKRQAIE---A 115

Query: 122 EVALRRA 128
            +ALRRA
Sbjct: 116 NLALRRA 122
>gi|2914167|pdb|1AQT| Epsilon Subunit Of F1f0-Atp Synthase From
           Escherichia Coli
 gi|6573687|pdb|1QO1|J Chain J, Molecular Architecture Of The Rotary
           Motor In Atp Synthase From Yeast Mitochondria
          Length = 138

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 4/129 (3%)

Query: 6   VQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWVAV 65
           + VV+ +   +      I V   +GE+GI PGH  L+  +    ++I + H    +++ +
Sbjct: 6   LDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHE-EFIYL 64

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
           +GGI+EV    VT++AD+A R +D+D  RA  AK +AE   E   ++    +  +A   L
Sbjct: 65  SGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAE---EHISSSHGDVDYAQASAEL 121

Query: 126 RRAINRISV 134
            +AI ++ V
Sbjct: 122 AKAIAQLRV 130
>gi|16131599|ref|NP_418187.1| membrane-bound ATP synthase, F1
           sector, epsilon-subunit [Escherichia coli K12]
 gi|24115034|ref|NP_709544.1| membrane-bound ATP synthase, F1
           sector, epsilon-subunit [Shigella flexneri 2a str. 301]
 gi|26250475|ref|NP_756515.1| ATP synthase epsilon chain
           [Escherichia coli CFT073]
 gi|114596|sp|P00832|ATPE_ECOLI ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|67860|pir||PWECE H+-transporting two-sector ATPase (EC 3.6.3.14)
           epsilon chain - Escherichia coli (strain K-12)
 gi|42278|emb|CAA23595.1| unnamed protein product [Escherichia coli]
 gi|43266|emb|CAA25783.1| unnamed protein product [Escherichia coli]
 gi|146326|gb|AAA83876.1| H+ ATPase F1 epsilon subunit
 gi|148140|gb|AAA24738.1| ATP synthase epsilon subunit (atp-9)
 gi|290580|gb|AAA62083.1| ATP synthase F1 epsilon subunit
 gi|1790169|gb|AAC76754.1| membrane-bound ATP synthase, F1 sector,
           epsilon-subunit [Escherichia coli K12]
 gi|24054293|gb|AAN45251.1|AE015388_4 membrane-bound ATP synthase,
           F1 sector, epsilon-subunit [Shigella flexneri 2a str.
           301]
 gi|26110905|gb|AAN83089.1|AE016769_204 ATP synthase epsilon chain
           [Escherichia coli CFT073]
          Length = 139

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 4/129 (3%)

Query: 6   VQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWVAV 65
           + VV+ +   +      I V   +GE+GI PGH  L+  +    ++I + H    +++ +
Sbjct: 7   LDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHE-EFIYL 65

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
           +GGI+EV    VT++AD+A R +D+D  RA  AK +AE   E   ++    +  +A   L
Sbjct: 66  SGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAE---EHISSSHGDVDYAQASAEL 122

Query: 126 RRAINRISV 134
            +AI ++ V
Sbjct: 123 AKAIAQLRV 131
>gi|30064964|ref|NP_839135.1| membrane-bound ATP synthase, F1
           sector, epsilon-subunit [Shigella flexneri 2a str.
           2457T]
 gi|6625704|gb|AAF19363.1|AF188265_9 ATP synthase subunit epsilon
           [Salmonella typhimurium]
 gi|30043225|gb|AAP18946.1| membrane-bound ATP synthase, F1 sector,
           epsilon-subunit [Shigella flexneri 2a str. 2457T]
          Length = 137

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 4/129 (3%)

Query: 6   VQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWVAV 65
           + VV+ +   +      I V   +GE+GI PGH  L+  +    ++I + H    +++ +
Sbjct: 5   LDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHE-EFIYL 63

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
           +GGI+EV    VT++AD+A R +D+D  RA  AK +AE   E   ++    +  +A   L
Sbjct: 64  SGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAE---EHISSSHGDVDYAQASAEL 120

Query: 126 RRAINRISV 134
            +AI ++ V
Sbjct: 121 AKAIAQLRV 129
>gi|6729899|pdb|1BSH|A Chain A, Solution Structure Of The Epsilon
           Subunit Of The F1- Atpsynthase From Escherichia Coli And
           Orientation Of The Subunit Relative To The Beta Subunits
           Of The Complex
 gi|6729900|pdb|1BSN|A Chain A, Solution Structure Of The Epsilon
           Subunit Of The F1- Atpsynthase From Escherichia Coli And
           Orientation Of The Subunit Relative To The Beta Subunits
           Of The Complex
 gi|14278248|pdb|1FS0|E Chain E, Complex Of GammaEPSILON ATP
           SYNTHASE FROM E.COLI
          Length = 138

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 4/129 (3%)

Query: 6   VQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWVAV 65
           + VV+ +   +      I V   +GE+GI PGH  L+  +    ++I + H    +++ +
Sbjct: 6   LDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHE-EFIYL 64

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
           +GGI+EV    VT++AD+A R +D+D  RA  AK +AE   E   ++    +  +A   L
Sbjct: 65  SGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAE---EHISSSHGDVDYAQASAEL 121

Query: 126 RRAINRISV 134
            +AI ++ V
Sbjct: 122 AKAIAQLRV 130
>gi|11465726|ref|NP_053870.1| ATP synthase CF1 epsilon chain
           [Porphyra purpurea]
 gi|1703740|sp|P51260|ATPE_PORPU ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|2147447|pir||S73181 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - red alga (Porphyra purpurea)
           chloroplast
 gi|1276726|gb|AAC08146.1| ATP synthase CF1 epsilon chain [Porphyra
           purpurea]
          Length = 134

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 41/123 (33%), Positives = 68/123 (54%), Gaps = 9/123 (7%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L ++++ PD   +D  A  I + +  G++GIL GH  L+  L++  M++ R  +E +  V
Sbjct: 3   LNIRIIAPDRTVWDAEAQEIILPSSTGQLGILTGHAPLLTALDIGVMRV-RVDKEWMPIV 61

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERAL-------EKAQTTQNID 116
            + GG  E+  +Q+TI+ + AE A  IDL  AE+  + A + L       EK + TQNI 
Sbjct: 62  LL-GGFAEIENNQLTILVNGAEEASQIDLVEAEKNLDTATQLLNDASSSKEKIEATQNIR 120

Query: 117 EMR 119
           + R
Sbjct: 121 KAR 123
>gi|29655230|ref|NP_820922.1| ATP synthase F1, epsilon subunit
           [Coxiella burnetii RSA 493]
 gi|29542502|gb|AAO91436.1| ATP synthase F1, epsilon subunit
           [Coxiella burnetii RSA 493]
          Length = 142

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 7/128 (5%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMK-INRSHQEGVDW 62
           + +++V+ +   +     +I V    GE+GI PGH  L+  L   Q+K I    +E V +
Sbjct: 5   MQLEIVSAEAAIFSGKVEMIVVTGGMGELGIYPGHRQLLTSLKPGQIKAILEGGKEEVFY 64

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQT----TQNIDEM 118
           ++  GG++EV  + VTI+AD+A RA D+D   A  AKE AER L K +     ++ + E+
Sbjct: 65  MS--GGMLEVQPEIVTILADTALRAVDLDEAAAISAKEEAERRLAKQKAGIEYSKAMTEL 122

Query: 119 RRAEVALR 126
             A   LR
Sbjct: 123 AEAAAQLR 130
>gi|22796597|emb|CAD23902.1| ATP synthase epsilon subunit [Nasa
           triphylla]
          Length = 132

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 40/131 (30%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    WV
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WV 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DI+   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIEPQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797505|emb|CAD23913.1| ATP synthase epsilon subunit [Primula
           veris]
          Length = 132

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 39/131 (29%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+   ID   A++  E AE  L+KA+  + + E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSAIDPQEAQQTLEIAEANLKKAEGKRQLIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797503|emb|CAD23912.1| ATP synthase epsilon subunit
           [Polemonium pulcherrimum]
          Length = 126

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 39/126 (30%), Positives = 71/126 (55%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAIDIGILRIRINDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE++ DID   A++  E AE  L+KA+  + I E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKSSDIDSQEAQQTLEIAEANLKKAEGKRQIIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|6635347|gb|AAF19791.1|AF162208_1 ATPase epsilon chain [Lactuca
           sativa]
          Length = 126

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 39/126 (30%), Positives = 70/126 (54%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATSVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE++ DID   A++  E AE AL KA+  +   E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKSGDIDPQEAQQTLEIAEAALRKAEGKRQTIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|22797521|emb|CAD23925.1| ATP synthase epsilon subunit [Schima
           superba]
          Length = 126

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 38/126 (30%), Positives = 71/126 (56%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIVLSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE++ DID   A++  E +E  L+KA+  + I E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEISEANLKKAEGKRQIIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|28899842|ref|NP_799447.1| ATP synthase F1, epsilon subunit
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|31339962|sp|Q87KA9|ATPE_VIBPA ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|28808094|dbj|BAC61331.1| ATP synthase F1, epsilon subunit
           [Vibrio parahaemolyticus]
          Length = 140

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 42/136 (30%), Positives = 71/136 (51%), Gaps = 6/136 (4%)

Query: 1   MAQLT--VQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQE 58
           MA +T  + VV+ +   +        V   +GE+GI  GH  L++ +    ++I + H  
Sbjct: 1   MAPITFHLDVVSAEKRIFSGRVETFQVTGSEGELGIFHGHTPLLSAIKPGMVRIVKQHGH 60

Query: 59  GVDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEM 118
             +++ V+GG++EV     T++AD+A R  D+D  +AE AK RAE   EK Q      + 
Sbjct: 61  E-EFIYVSGGMVEVQPGTATVLADTAIRGEDLDAAKAEEAKRRAE---EKIQNQHGDMDF 116

Query: 119 RRAEVALRRAINRISV 134
            +A   L +AI ++ V
Sbjct: 117 AQAASELAKAIAQLRV 132
>gi|7525039|ref|NP_051065.1| ATP synthase CF1 epsilon chain
           [Arabidopsis thaliana]
 gi|5881700|dbj|BAA84391.1| ATPase epsilon subunit [Arabidopsis
           thaliana]
          Length = 132

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 41/131 (31%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+L  H  +   +++  +KI  ++Q    W+
Sbjct: 3   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLANHAPIATAVDIGILKIRLANQ----WL 58

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++TI+ + AE+  DID   A++  E AE  L KA+  +   E   A
Sbjct: 59  TMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 115

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 116 NLALRRARTRV 126
>gi|22797838|emb|CAD24005.1| ATP synthase epsilon subunit [Valeriana
           hirtella]
          Length = 132

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 40/131 (30%), Positives = 70/131 (52%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+   +D     I + T  G++G+LP H  +   +++  ++I  + Q    WV
Sbjct: 2   LNLCVLTPNRTVWDSEVKEIILATNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WV 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ ++AE+  DID   A +  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNNAEKGSDIDPEEARQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|15804331|ref|NP_290370.1| membrane-bound ATP synthase, F1
           sector, epsilon-subunit [Escherichia coli O157:H7
           EDL933]
 gi|15833927|ref|NP_312700.1| membrane-bound ATP synthase
           epsilon-subunit AtpC [Escherichia coli O157:H7]
 gi|20137293|sp|P58646|ATPE_ECO57 ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|25290493|pir||A98213 hypothetical protein ECs4673 [imported] -
           Escherichia coli  (strain O157:H7, substrain RIMD
           0509952)
 gi|25290497|pir||B86059 hypothetical protein atpC [imported] -
           Escherichia coli  (strain O157:H7, substrain EDL933)
 gi|12518588|gb|AAG58934.1|AE005605_2 membrane-bound ATP synthase,
           F1 sector, epsilon-subunit [Escherichia coli O157:H7
           EDL933]
 gi|13364148|dbj|BAB38096.1| membrane-bound ATP synthase
           epsilon-subunit AtpC [Escherichia coli O157:H7]
          Length = 139

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 4/129 (3%)

Query: 6   VQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWVAV 65
           + VV+ +   +      I V   +GE+GI PGH  L+  +    ++I + H    +++ +
Sbjct: 7   LDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHE-EFIYL 65

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
           +GGI+EV    VT++AD+A R +D+D  RA  AK +AE   E   ++    +  +A   L
Sbjct: 66  SGGILEVQLGNVTVLADTAIRGQDLDEARAMEAKRKAE---EHISSSHGDVDYAQASAEL 122

Query: 126 RRAINRISV 134
            +AI ++ V
Sbjct: 123 AKAIAQLRV 131
>gi|22797153|emb|CAD23995.1| ATP synthase epsilon subunit
           [Pentaphragma ellipticum]
          Length = 132

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 39/131 (29%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW- 62
           L + V+TP+ I +D   + I + T  G++G+LP H  +   +++  ++I    Q    W 
Sbjct: 2   LNLCVLTPNRIVWDSEVNEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKGQ----WF 57

Query: 63  -VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            + + GG   ++ +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMTLTGGFARIDNNEITVLVNDAEKSGDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARIRV 125
>gi|22795909|emb|CAD23928.1| ATP synthase epsilon subunit
           [Cardiopteris quinqueloba]
          Length = 132

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 39/131 (29%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  +++    WV
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPKHAPIATAVDIGILRIRLNNK----WV 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E A+  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAKANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|41039|emb|CAA23528.1| unnamed protein product [Escherichia coli]
          Length = 133

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 38/127 (29%), Positives = 68/127 (52%), Gaps = 4/127 (3%)

Query: 6   VQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWVAV 65
           + VV+ +   +      I V   +GE+GI PGH  L+  +    ++I + H    +++ +
Sbjct: 7   LDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHE-EFIYL 65

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
           +GGI+EV    VT++AD+A R +D+D  RA  AK +AE   E   ++    +  +A   L
Sbjct: 66  SGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAE---EHISSSHGDVDYAQASAEL 122

Query: 126 RRAINRI 132
            +AI ++
Sbjct: 123 AKAIAQL 129
>gi|13518305|ref|NP_084664.1| ATP synthase CF1 epsilon chain
           [Oenothera elata subsp. hookeri]
 gi|20137522|sp|Q9MTP6|ATPE_OENHO ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|6723720|emb|CAB67129.1| ATP synthase epsilon subunit [Oenothera
           elata subsp. hookeri]
          Length = 133

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 39/131 (29%), Positives = 69/131 (51%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I ++ Q    W+
Sbjct: 3   LNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRQNGQ----WL 58

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++TI+ + AE+  DID   A+     AE    KA+  +   E   A
Sbjct: 59  TMALMGGFARIGNNEITILVNDAEKGSDIDPQEAQETLGLAEANFRKAEGKRQTIE---A 115

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 116 NLALRRARTRV 126
>gi|7436143|pir||T09973 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - Mycobacterium leprae
 gi|699344|gb|AAA63105.1| atpC [Mycobacterium leprae]
          Length = 124

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 36/101 (35%), Positives = 63/101 (61%), Gaps = 2/101 (1%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPL-NVHQMKINRSHQEG 59
           M +L +++V  D   +    + +  RT  GE+GILP HI ++A L + + ++I R  ++ 
Sbjct: 4   MDELNIEIVAVDRKIWSGKGTFLFTRTTAGEIGILPRHIPMVAQLVDDNMVRIEREGEKD 63

Query: 60  VDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKE 100
           +  VAV+GG + V E++V+I+A+SAE   +ID N A++  E
Sbjct: 64  LR-VAVDGGFLSVTEERVSILAESAEFDSEIDENAAKQDAE 103
>gi|22795929|emb|CAD23972.1| ATP synthase epsilon subunit
           [Desfontainia spinosa]
          Length = 126

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    WV  A+ 
Sbjct: 1   LTPNRIIWDSEVKEIILSTNSGQIGVLPNHAPIATAVDISILRIRLNDQ----WVTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++TI+ + AE+  DID   A++  E AE  L+KA+  +   E   A +ALR
Sbjct: 57  GGFARIGNNEITILVNDAEKGSDIDPQEAQQTLEIAEANLKKAEGKRQKIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|22795927|emb|CAD23971.1| ATP synthase epsilon subunit
           [Columellia oblonga]
          Length = 129

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 39/127 (30%), Positives = 70/127 (54%), Gaps = 9/127 (7%)

Query: 8   VVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AV 65
           V+TP+ I  D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+
Sbjct: 3   VLTPNRIICDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMAL 58

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
            GG   +  +++T++ + AE++ DID   A++  E AE  L+KA+  +   E   A +AL
Sbjct: 59  MGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQTIE---ANLAL 115

Query: 126 RRAINRI 132
           RRA  R+
Sbjct: 116 RRARTRV 122
>gi|22795937|emb|CAD23981.1| ATP synthase epsilon subunit [Aralidium
           pinnatifidum]
 gi|22797834|emb|CAD23984.1| ATP synthase epsilon subunit
           [Torricellia tiliifolia]
          Length = 124

 Score = 56.2 bits (134), Expect = 9e-08
 Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 9/124 (7%)

Query: 11  PDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVNGG 68
           P+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ GG
Sbjct: 1   PNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALMGG 56

Query: 69  IIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALRRA 128
              +  +++TI+ + AE++ DIDL  A++  E AE  L KA+  +   E   A +ALRRA
Sbjct: 57  FARIGNNEITILVNDAEKSSDIDLQEAQQTLEIAEANLRKAEGKRQTIE---ANLALRRA 113

Query: 129 INRI 132
             R+
Sbjct: 114 RTRV 117
>gi|22797832|emb|CAD23978.1| ATP synthase epsilon subunit [Tribeles
           australis]
          Length = 122

 Score = 56.2 bits (134), Expect = 9e-08
 Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 9/125 (7%)

Query: 10  TPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW--VAVNG 67
           TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W  +A+ G
Sbjct: 1   TPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTIALMG 56

Query: 68  GIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALRR 127
           G   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A +ALRR
Sbjct: 57  GFARIGNNEITVLVNDAEKRSDIDPQEAQQTLETAEANLRKAKGKRQIIE---ANLALRR 113

Query: 128 AINRI 132
           A  R+
Sbjct: 114 ARTRV 118
>gi|67870|pir||PWBHE H+-transporting two-sector ATPase (EC 3.6.3.14)
           epsilon chain - barley chloroplast
          Length = 137

 Score = 56.2 bits (134), Expect = 9e-08
 Identities = 42/130 (32%), Positives = 73/130 (55%), Gaps = 4/130 (3%)

Query: 3   QLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW 62
           +L + V+TP  I +D     I + T  G++G+LP H  +   +++  ++I   + + +  
Sbjct: 2   KLNLYVLTPKRIIWDCEVKEIILSTNSGQIGVLPNHAPINTAVDMGPLRIRLLNDQWLTA 61

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
           V  +G    VN +++ I+ + AE   DID   A++A E AE  L KA+ T+++ E   A+
Sbjct: 62  VLWSGFARIVN-NEIIILGNDAELGSDIDPEEAQKALEIAEANLSKAEGTKSLVE---AK 117

Query: 123 VALRRAINRI 132
           +ALRRA  RI
Sbjct: 118 LALRRARIRI 127
>gi|231602|sp|P30400|ATPE_CUSRE ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|82304|pir||S20475 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - southern Asian dodder
           chloroplast
 gi|58332|emb|CAA43865.1| H(+)-transporting ATP synthase [Cuscuta
           reflexa]
          Length = 136

 Score = 56.2 bits (134), Expect = 9e-08
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 9/138 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++GILP H  +   +++  ++I  + +    W+
Sbjct: 3   LKLCVLTPNRIFWDSEVEEIILSTNSGQIGILPTHTPIATSVDIGILRIRLNGR----WL 58

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AER+ DID   A++  E AE    KA+  +   E   A
Sbjct: 59  TMALMGGFARIGNNEITVLVNDAERSSDIDPQEAQQTVEIAEANFRKAKGKRQKIEANIA 118

Query: 122 EVALR---RAINRISVGK 136
               R   +A++ ISVGK
Sbjct: 119 LCRARTRVKAVSPISVGK 136
>gi|14017578|ref|NP_114265.1| ATP synthase CF1 epsilon chain
           [Triticum aestivum]
 gi|114612|sp|P20859|ATPE_WHEAT ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|67869|pir||PWWTE H+-transporting two-sector ATPase (EC 3.6.3.14)
           epsilon chain - wheat chloroplast
 gi|343678|gb|AAA84727.1| ATP synthase epsilon subunit
 gi|343982|dbj|BAA01871.1| ATP synthase epsilon subunit [Aegilops
           columnaris]
 gi|343985|dbj|BAA01873.1| ATP synthase epsilon subunit [Aegilops
           crassa]
 gi|1334361|emb|CAA25115.1| ATPase, subunit E [Hordeum vulgare]
 gi|13928211|dbj|BAB47040.1| ATPase epsilon subunit [Triticum
           aestivum]
          Length = 137

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 42/130 (32%), Positives = 73/130 (55%), Gaps = 4/130 (3%)

Query: 3   QLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW 62
           +L + V+TP  I +D     I + T  G++G+LP H  +   +++  ++I   + + +  
Sbjct: 2   KLNLYVLTPKRIIWDCEVKEIILSTNSGQIGVLPNHAPINTAVDMGPLRIRLLNDQWLTA 61

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
           V  +G    VN +++ I+ + AE   DID   A++A E AE  L KA+ T+++ E   A+
Sbjct: 62  VLWSGFARIVN-NEIIILGNDAELGSDIDPEEAQKALEIAEANLSKAEGTKDLVE---AK 117

Query: 123 VALRRAINRI 132
           +ALRRA  RI
Sbjct: 118 LALRRARIRI 127
>gi|22795895|emb|CAD23897.1| ATP synthase epsilon subunit
           [Dipentodon sinicus]
          Length = 132

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 39/127 (30%), Positives = 69/127 (53%), Gaps = 9/127 (7%)

Query: 8   VVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AV 65
           V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+
Sbjct: 6   VLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMAL 61

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
            GG   +  +++TI+ + AE+  DID   A++  + AE  L KA+  +   E   A +AL
Sbjct: 62  MGGFARIGNNEITILVNDAEKGSDIDPQEAQQTLQIAETNLRKAEGKRQTIE---ANLAL 118

Query: 126 RRAINRI 132
           RRA  R+
Sbjct: 119 RRARTRV 125
>gi|22795913|emb|CAD23937.1| ATP synthase epsilon subunit [Alstonia
           scholaris]
          Length = 124

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 9/125 (7%)

Query: 10  TPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVNG 67
           TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ G
Sbjct: 1   TPNRIGWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALMG 56

Query: 68  GIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALRR 127
           G   +  +Q+T++ + AE+  DID   A++  E AE  L KA+  +   E   A +ALRR
Sbjct: 57  GFARIGNNQITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAKGKRQTIE---ANLALRR 113

Query: 128 AINRI 132
           A  R+
Sbjct: 114 ARTRV 118
>gi|15616639|ref|NP_239851.1| ATP synthase epsilon chain [Buchnera
           aphidicola str. APS (Acyrthosiphon pisum)]
 gi|11131218|sp|P57125|ATPE_BUCAI ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|25290505|pir||A84931 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain [imported] - Buchnera sp.
           (strain APS)
 gi|10038702|dbj|BAB12737.1| ATP synthase epsilon chain [Buchnera
           aphidicola str. APS (Acyrthosiphon pisum)]
          Length = 138

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 32/94 (34%), Positives = 52/94 (55%)

Query: 23  ITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWVAVNGGIIEVNEDQVTIVAD 82
           I V   +GE+GI PGH  L++ L    + I     +  + + ++GGI+EV    V+I+AD
Sbjct: 22  IRVSGSEGELGIYPGHAQLLSILKPGMVYIFHKKDKKEECIYISGGILEVQPSVVSILAD 81

Query: 83  SAERARDIDLNRAERAKERAERALEKAQTTQNID 116
            A  A D+D +R  + K+ AE +++   T  N D
Sbjct: 82  VAIHAIDLDRSRILKTKKNAEESIKSNNTKINKD 115
>gi|22796294|emb|CAD23967.1| ATP synthase epsilon subunit [Grevea
           sp. Thulin et al. s.n.]
          Length = 132

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 40/131 (30%), Positives = 70/131 (52%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + +  G++GILP H  +   +++  ++I  + +    W+
Sbjct: 2   LNLCVLTPNRIIWDSEVKEIILPSTSGQIGILPNHAPIATAVDIGILRIRLNDR----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++TI+ + AE+  DID   A++  E AE  L KA   +   E   A
Sbjct: 58  TMALMGGFARIGNNEITILVNDAEKGSDIDPQEAQQTLETAEANLRKAGGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|584814|sp|Q08808|ATPE_GALSU ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|2146719|pir||S70820 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - red alga (Cyanidium caldarium)
           chloroplast
 gi|396526|emb|CAA47242.1| H(+)-transporting ATP synthase [Cyanidium
           caldarium]
          Length = 138

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L ++V+ PD I ++  A  + + T  G++GIL GH  L+  L++  M++  ++     W 
Sbjct: 3   LNIRVIAPDRIVWNAKAEEVILPTSTGQLGILSGHAPLLTALDIGVMRVRITNT----WT 58

Query: 64  AVN--GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
           ++   GG  EV  D++ I+ + AE A  I+L++A +    +   L +A+T +   E   A
Sbjct: 59  SIVLFGGFAEVENDEILILVNGAEEASVINLDKANKELIESSSLLNEAKTNK---EKFEA 115

Query: 122 EVALRRAINRI 132
              LR+A  R+
Sbjct: 116 TQKLRKAKARV 126
>gi|227787|prf||1711264B CF1 ATPase:SUBUNIT=epsilon
          Length = 137

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 41/130 (31%), Positives = 73/130 (55%), Gaps = 4/130 (3%)

Query: 3   QLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW 62
           +L + V+TP  I +D     I + T  G++G+LP H  +   +++  ++I   + + +  
Sbjct: 2   KLNLYVLTPKRIIWDCEVKEIILSTNSGQIGVLPNHAPINTAVDMGPLRIRLLNDQWLTA 61

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
           V ++G    VN +++ I+ + AE   DID   A++A E AE  L KA+ T+   E+  A+
Sbjct: 62  VLMSGPARIVN-NEIIILGNDAELGSDIDPEEAQQALEIAEANLSKAEGTK---ELVEAK 117

Query: 123 VALRRAINRI 132
           +ALRRA  R+
Sbjct: 118 LALRRARIRV 127
>gi|25027872|ref|NP_737926.1| H+-ATPase epsilon subunit
           [Corynebacterium efficiens YS-314]
 gi|23493155|dbj|BAC18126.1| H+-ATPase epsilon subunit
           [Corynebacterium efficiens YS-314]
          Length = 124

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 3/126 (2%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           MA++TV++V+ + + +   AS++T +T +GE+G+LP H  ++  L V    +     +G 
Sbjct: 1   MAEITVELVSVERMLWSGQASIVTAQTTEGEIGVLPDHEPMLGQL-VENGVVTIQPTDGD 59

Query: 61  DWVA-VNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
             VA V GG + V++++VTI+AD A  A ++D   AE A   ++  L KA+    +  +R
Sbjct: 60  RLVAGVQGGFLSVSKEKVTILADFAVWAHEVDSASAE-ADLNSDDELAKARAEAGLRAVR 118

Query: 120 RAEVAL 125
           R+   L
Sbjct: 119 RSSEGL 124
>gi|15837744|ref|NP_298432.1| ATP synthase, epsilon chain [Xylella
           fastidiosa 9a5c]
 gi|11266752|pir||F82715 ATP synthase, epsilon chain XF1142
           [imported] - Xylella fastidiosa (strain 9a5c)
 gi|9106106|gb|AAF83952.1|AE003950_2 ATP synthase, epsilon chain
           [Xylella fastidiosa 9a5c]
          Length = 143

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M+ +   +V+ +   +   A+L+      GE+GI+P H  LI  L   ++ I   + E +
Sbjct: 4   MSTIRCDIVSAEQEIFHGEATLVVATGELGELGIVPKHAPLITRLKPGKVIITTVNGEQL 63

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNI 115
           D+ A++GGI+EV    VTI+ADSA RA  ID     +AKE AER L     T ++
Sbjct: 64  DF-AISGGILEVQPQVVTILADSAIRADTIDEVAVRKAKEEAERILANRGETIDV 117
>gi|20137536|sp|Q9PE86|ATPE_XYLFA ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
          Length = 140

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M+ +   +V+ +   +   A+L+      GE+GI+P H  LI  L   ++ I   + E +
Sbjct: 1   MSTIRCDIVSAEQEIFHGEATLVVATGELGELGIVPKHAPLITRLKPGKVIITTVNGEQL 60

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNI 115
           D+ A++GGI+EV    VTI+ADSA RA  ID     +AKE AER L     T ++
Sbjct: 61  DF-AISGGILEVQPQVVTILADSAIRADTIDEVAVRKAKEEAERILANRGETIDV 114
>gi|22796296|emb|CAD23982.1| ATP synthase epsilon subunit
           [Griselinia littoralis]
          Length = 126

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAIDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|22795911|emb|CAD23930.1| ATP synthase epsilon subunit
           [Cassinopsis ilicifolia]
          Length = 126

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 39/126 (30%), Positives = 69/126 (53%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPVATAVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++TI+ + AE++ DID   A++  E AE  L KA+  +   E   A +ALR
Sbjct: 57  GGFARIGNNEITILVNDAEKSSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|15827577|ref|NP_301840.1| ATP synthase [epsilon] chain
           [Mycobacterium leprae]
 gi|13432114|sp|P45822|ATPE_MYCLE ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|25290494|pir||D87052 ATP synthase [epsilon] chain [imported] -
           Mycobacterium leprae
 gi|13093127|emb|CAC31527.1| ATP synthase [epsilon] chain
           [Mycobacterium leprae]
          Length = 121

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 36/101 (35%), Positives = 63/101 (61%), Gaps = 2/101 (1%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPL-NVHQMKINRSHQEG 59
           M +L +++V  D   +    + +  RT  GE+GILP HI ++A L + + ++I R  ++ 
Sbjct: 1   MDELNIEIVAVDRKIWSGKGTFLFTRTTAGEIGILPRHIPMVAQLVDDNMVRIEREGEKD 60

Query: 60  VDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKE 100
           +  VAV+GG + V E++V+I+A+SAE   +ID N A++  E
Sbjct: 61  LR-VAVDGGFLSVTEERVSILAESAEFDSEIDENAAKQDAE 100
>gi|22796609|emb|CAD23940.1| ATP synthase epsilon subunit [Logania
           vaginalis]
          Length = 125

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  +   E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLELAEANLRKAEGKRQTIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|22797499|emb|CAD22411.1| ATP synthase epsilon chain [Sphenoclea
           zeylanica]
          Length = 134

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 39/131 (29%), Positives = 70/131 (52%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+ P+ I ++     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLXPNRIVWNSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLTDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++TI+ + AE+  DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITILVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797826|emb|CAD23926.1| ATP synthase epsilon subunit
           [Theophrasta americana]
          Length = 132

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 38/131 (29%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+ P+ I ++     I + T  G++G+ P H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLAPNRIVWESEVKEIILSTNSGQIGVXPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE  L+KA+  + I E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQILEIAETNLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22795495|emb|CAD23929.1| ATP synthase epsilon subunit [Apodytes
           dimidiata]
          Length = 126

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|22795931|emb|CAD23973.1| ATP synthase epsilon subunit [Eremosyne
           pectinata]
          Length = 126

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE+  DID   A+   E AE  L KA+  +   E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKGNDIDPQEAQETLEIAETNLRKAEGKRQTIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RAKTRV 119
>gi|22796599|emb|CAD23904.1| ATP synthase epsilon subunit [Impatiens
           capensis]
          Length = 133

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 38/131 (29%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+   ++   + I + T  G++G+LP H  +   +++  ++I    Q    W+
Sbjct: 2   LNLCVLTPNRSVWNSEVNEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLKDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
              + GG   +  +++T++ + AE++ DID   A+   E AE  L+KA+  + I E   A
Sbjct: 58  MMVLMGGFARIGNNEITVLVNDAEKSSDIDPQEAQETLEIAEANLKKAEGKRQIIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|22797822|emb|CAD23898.1| ATP synthase epsilon subunit [Vitis
           vinifera]
          Length = 125

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 9/125 (7%)

Query: 10  TPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVNG 67
           TP+ I +D     I + T  G++GILP H  +   +++  ++I  + Q    W+  A+ G
Sbjct: 1   TPNRIVWDSKVKEIILSTNSGQIGILPNHAPIATAVDIGILRIRLNDQ----WLTMALMG 56

Query: 68  GIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALRR 127
           G   +  +++T++ + AE+  DI+   A++  E AE  L KA+  + I E   A +ALRR
Sbjct: 57  GFARIGNNEITVLVNDAEKGSDIEPQEAQQTLEIAEANLRKAEGKRQIIE---ANLALRR 113

Query: 128 AINRI 132
           A  R+
Sbjct: 114 ARTRV 118
>gi|11467198|ref|NP_043031.1| ATP synthase CF1 epsilon chain [Zea
           mays]
 gi|114599|sp|P00835|ATPE_MAIZE ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|67867|pir||PWZME H+-transporting two-sector ATPase (EC 3.6.3.14)
           epsilon chain - maize chloroplast
 gi|342578|gb|AAA85357.1| coupling factor epsilon subunit [Zea mays]
 gi|902228|emb|CAA60292.1| ATPase epsilon subunit [Zea mays]
          Length = 137

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 41/130 (31%), Positives = 72/130 (54%), Gaps = 4/130 (3%)

Query: 3   QLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW 62
           +L + V+TP  I +D     I + T  G++G+LP H  +   +++  ++I   + + +  
Sbjct: 2   KLNLYVLTPKRIIWDCEVKEIILSTNSGQIGVLPNHAPINTAVDMGPLRIRLLNDQWLTA 61

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
           V  +G    VN +++ I+ + AE   DID   A++A E AE  L KA+ T+   E+  A+
Sbjct: 62  VLWSGFARIVN-NEIIILGNDAELGSDIDPEEAQQALEIAEANLSKAEGTK---ELVEAK 117

Query: 123 VALRRAINRI 132
           +ALRRA  R+
Sbjct: 118 LALRRARIRV 127
>gi|22797151|emb|CAD23994.1| ATP synthase epsilon subunit
           [Menyanthes trifoliata]
          Length = 126

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPSHAPIATAVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKSGDIDPQEAQQTLEIAEANLRKAEGKRQTIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|20137566|sp|Q9TJR8|ATPE_PROWI ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|5748665|emb|CAB53103.1| ATP synthase CF1 epsilon chain
           [Prototheca wickerhamii]
          Length = 134

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 33/108 (30%), Positives = 64/108 (58%), Gaps = 2/108 (1%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + ++ PDGI +++ A  I + T  G++GIL  H  LI  L++  + I R+ ++ V ++
Sbjct: 3   LKILIMIPDGIFWNNKAEEIILPTNTGQIGILKNHAPLITALDIGVILI-RTDKKWVPFI 61

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQT 111
            + GG   + ++++TI+ + AE A  + L ++E A + A   LE A++
Sbjct: 62  -IMGGFALIKQNKITILVNGAESAGTLKLVQSEAAFQEATNKLENAKS 108
>gi|21672303|ref|NP_660370.1| ATP synthase epsilon chain [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
 gi|4033369|sp|O51871|ATPE_BUCAP ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|2827017|gb|AAC38109.1| ATP synthase subunit epsilon [Buchnera
           aphidicola]
 gi|21622901|gb|AAM67581.1| ATP synthase epsilon chain [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
          Length = 138

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 7/99 (7%)

Query: 23  ITVRTPDGEMGILPGH---INLIAPLNVHQMKINRSHQEGVDWVAVNGGIIEVNEDQVTI 79
           I V   +GEMGI PGH   +++I P  ++    N++ +     + ++GGI+EV    V+I
Sbjct: 22  IQVSGSEGEMGIYPGHTQLLSIIKPGVIYIFHKNKTEE----CLYISGGILEVQPSVVSI 77

Query: 80  VADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEM 118
           +AD A R  D+D  R  +AK++AE   +K  T    D++
Sbjct: 78  LADVAIRGIDLDRKRVVKAKKQAEEYFKKETTNVKKDDV 116
>gi|22797507|emb|CAD23914.1| ATP synthase epsilon subunit [Roridula
           gorgonias]
          Length = 129

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 39/131 (29%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 8   VVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW--VAV 65
           V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W  +A+
Sbjct: 6   VLTPNRIVWDSEVKEILLSTNSGKIGVLPNHAPIATAVDIGVLRIRLNDQ----WLTIAL 61

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
             G   +  +++T++ + AE++ DID   A++  E AE  L+KA+  +   E   A +AL
Sbjct: 62  MDGFARIRNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQKIE---ANLAL 118

Query: 126 RRAINRISVGK 136
           RRA  R+   K
Sbjct: 119 RRARTRVEAIK 129
>gi|22797549|emb|CAD23987.1| ATP synthase epsilon subunit
           [Phyllonoma ruscifolia]
          Length = 133

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKSSDIDPQDAQQTLEIAEANLRKAEGKRQTIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|22795915|emb|CAD23942.1| ATP synthase epsilon subunit [Acanthus
           longifolius]
          Length = 132

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 38/127 (29%), Positives = 70/127 (54%), Gaps = 9/127 (7%)

Query: 8   VVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AV 65
           V+TP+ + +D   + I + T  G++G+L  H  +   +++  ++I  + Q    W+  A+
Sbjct: 6   VLTPNRVVWDSDVNEIILSTNSGQIGVLLNHAPIATAVDIGILRIRLTDQ----WLTMAL 61

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
            GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  + I E   A +AL
Sbjct: 62  LGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQIIE---ANLAL 118

Query: 126 RRAINRI 132
           RRA  R+
Sbjct: 119 RRARTRV 125
>gi|22797828|emb|CAD23934.1| ATP synthase epsilon subunit [Vahlia
           capensis]
          Length = 126

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE+  DID   A++  E AE  L KA+  +   E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKGSDIDPEEAQQTLEIAEANLRKAEGKRQTIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|15606086|ref|NP_213463.1| ATP synthase F1 epsilon subunit
           [Aquifex aeolicus]
 gi|14285355|sp|O66903|ATPE_AQUAE ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|7436142|pir||C70359 ATP synthase F1 epsilon subunit - Aquifex
           aeolicus
 gi|2983262|gb|AAC06856.1| ATP synthase F1 epsilon subunit [Aquifex
           aeolicus VF5]
          Length = 132

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 37/125 (29%), Positives = 64/125 (50%), Gaps = 5/125 (4%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           + V++V+P G+ Y      + V T +GE+GIL  H+ L+  L    +  N   + G   +
Sbjct: 2   IQVEIVSPQGMVYSGEVESVNVPTVEGEVGILENHMYLMTLLKPGLVYFNGDDKNG---I 58

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
           AV  G+++V   +V I+A+ A       L  A + KE  E A++K  T Q ++E++  E 
Sbjct: 59  AVTYGVLDVTPQKVLILAEEAYEVG--KLPPASKLKEEFEEAVKKMATAQTMEELKEWEK 116

Query: 124 ALRRA 128
              +A
Sbjct: 117 EAEKA 121
>gi|22796286|emb|CAD23900.1| ATP synthase epsilon subunit [Grubbia
           rosmarinifolia]
          Length = 126

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T + + AE+  DID   A++  E AE  L KA+  +   E   A +ALR
Sbjct: 57  GGFARIGNNEITFLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|22795939|emb|CAD23988.1| ATP synthase epsilon subunit
           [Alseuosmia macrophylla]
          Length = 126

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 9/126 (7%)

Query: 9   VTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVN 66
           +TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ 
Sbjct: 1   LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALM 56

Query: 67  GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALR 126
           GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A +ALR
Sbjct: 57  GGFARIGNNEITVLVNDAEKSGDIDPQEAQQTLEIAEANLRKAEGKRQTIE---ANLALR 113

Query: 127 RAINRI 132
           RA  R+
Sbjct: 114 RARTRV 119
>gi|114591|sp|P09468|ATPE_ARATH ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|81663|pir||S01903 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - Arabidopsis thaliana
           chloroplast
 gi|11334|emb|CAA31381.1| Cf1 ATPase epsilon subunit (AA 1-132)
           [Arabidopsis thaliana]
          Length = 132

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 40/131 (30%), Positives = 70/131 (52%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+L  H  +   +++  + I  ++Q    W+
Sbjct: 3   LNLCVLTPNRIVWDSEVEEIILSTNSGQIGVLANHAPIATAVDIGILTIRLANQ----WL 58

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++TI+ + AE+  DID   A++  E AE  L KA+  +   E   A
Sbjct: 59  TMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 115

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 116 NLALRRARTRV 126
>gi|22797836|emb|CAD23999.1| ATP synthase epsilon subunit [Viburnum
           rhytidophyllum]
          Length = 125

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 9/125 (7%)

Query: 10  TPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVNG 67
           TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ G
Sbjct: 1   TPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALMG 56

Query: 68  GIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALRR 127
           G   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A +ALRR
Sbjct: 57  GFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLRKAEGKRQTIE---ANLALRR 113

Query: 128 AINRI 132
           A  R+
Sbjct: 114 ARTRV 118
>gi|24215475|ref|NP_712956.1| ATP synthase F1, epsilon subunit
           [Leptospira interrogans serovar lai str. 56601]
 gi|24196606|gb|AAN49974.1|AE011443_3 ATP synthase F1, epsilon
           subunit [Leptospira interrogans serovar lai str. 56601]
          Length = 127

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 2/102 (1%)

Query: 3   QLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW 62
           +L V V++P+ I Y      + V   +G  GILP H  L+A L +  ++I +   E +  
Sbjct: 5   KLKVSVISPEKILYKGEVDSLIVPGSEGFFGILPNHAPLVATLGIGILEIRKG--EKLKV 62

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAER 104
           ++V GG +E+ ++ ++I+ D      DIDL   ++    AE+
Sbjct: 63  LSVEGGFVEIKDNSISILTDHGALKEDIDLEVEKKNLAEAEK 104
>gi|22795499|emb|CAD23979.1| ATP synthase epsilon subunit [Apium
           graveolens]
          Length = 139

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 39/131 (29%), Positives = 70/131 (52%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+   ++   + I + T  G++G+LP H ++   +++  +KI    Q    W+
Sbjct: 2   LNLCVLTPNRTVWNSKVNEIILSTNSGQIGVLPNHASVATAVDIGILKIRLDGQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A +  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKGSDIDSQEARQTLEIAEANLRKAEGKRQKIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|461577|sp|Q05375|ATPE_SYNP1 ATP synthase epsilon chain (ATP
          synthase F1 sector epsilon subunit)
 gi|480500|pir||S36973 H+-transporting two-sector ATPase (EC
          3.6.3.14) epsilon chain - Synechococcus sp
 gi|49228|emb|CAA49883.1| ATP synthase (epsilon);
          H(+)-transporting ATP synthase [Synechococcus sp.]
          Length = 138

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 32/96 (33%), Positives = 54/96 (55%), Gaps = 6/96 (6%)

Query: 4  LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
          +TV+V+ PD   +D  A  + + +  G++GIL  H  L+  L    M++ +  +    WV
Sbjct: 3  MTVRVIAPDKTVWDAPAEEVILPSTTGQLGILSNHAPLLTALETGVMRVRQERE----WV 58

Query: 64 AVN--GGIIEVNEDQVTIVADSAERARDIDLNRAER 97
          A+   GG  EV  ++VT++ ++AER   IDL  A+R
Sbjct: 59 AIALMGGFAEVENNEVTVLVNAAERGDTIDLETAKR 94
>gi|28261723|ref|NP_783238.1| ATPase epsilon subunit [Atropa
           belladonna]
 gi|20068337|emb|CAC88050.1| ATPase epsilon subunit [Atropa
           belladonna]
          Length = 133

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 39/131 (29%), Positives = 71/131 (53%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++GIL  H  +   +++  ++I  + Q    W+
Sbjct: 3   LNLSVLTPNRIVWDSEVEEIVLSTNSGQIGILSNHAPIATAVDIGILRIRLNDQ----WL 58

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE+  DID   A++  E AE  ++KA+  +   E   A
Sbjct: 59  TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANVKKAEGRRQKIE---A 115

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 116 NLALRRARTRV 126
>gi|15644357|ref|NP_229409.1| ATP synthase F1, subunit epsilon
          [Thermotoga maritima]
 gi|20137576|sp|Q9X1U5|ATPE_THEMA ATP synthase epsilon chain (ATP
          synthase F1 sector epsilon subunit)
 gi|7462072|pir||C72231 ATP synthase F1, subunit epsilon -
          Thermotoga maritima  (strain MSB8)
 gi|4982181|gb|AAD36676.1|AE001805_1 ATP synthase F1, subunit
          epsilon [Thermotoga maritima]
          Length = 108

 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 2/91 (2%)

Query: 4  LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
          + V++VTP GI YD  +  I+ RT +G MGILP    ++  L+V  +KI     E    +
Sbjct: 1  MKVKIVTPYGIVYDRESDFISFRTVEGSMGILPRRAPIVTQLSVCDVKIKSGDDEY--HL 58

Query: 64 AVNGGIIEVNEDQVTIVADSAERARDIDLNR 94
           V GG +  +   V I+ + A R  DI  +R
Sbjct: 59 KVAGGFLLCDGKDVIIITEEAGREEDISPDR 89
>gi|22797553|emb|CAD23996.1| ATP synthase epsilon subunit [Phelline
           lucida]
          Length = 125

 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 9/125 (7%)

Query: 10  TPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVNG 67
           TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ G
Sbjct: 1   TPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALMG 56

Query: 68  GIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALRR 127
           G   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A +ALRR
Sbjct: 57  GFARIGNNEITVLVNDAEKSGDIDPQEAQQTLEIAEANLRKAEGKRQTIE---ANLALRR 113

Query: 128 AINRI 132
           A  R+
Sbjct: 114 ARTRV 118
>gi|15608451|ref|NP_215827.1| atpC [Mycobacterium tuberculosis
           H37Rv]
 gi|15840762|ref|NP_335799.1| ATP synthase F1, epsilon subunit
           [Mycobacterium tuberculosis CDC1551]
 gi|31792504|ref|NP_854997.1| PROBABLE ATP SYNTHASE EPSILON CHAIN
           ATPC [Mycobacterium bovis subsp. bovis AF2122/97]
 gi|1703739|sp|Q10595|ATPE_MYCTU ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|7436147|pir||C70775 probable atpC protein - Mycobacterium
           tuberculosis (strain H37RV)
 gi|1322435|emb|CAA97744.1| atpC [Mycobacterium tuberculosis H37Rv]
 gi|13880954|gb|AAK45613.1| ATP synthase F1, epsilon subunit
           [Mycobacterium tuberculosis CDC1551]
 gi|31618093|emb|CAD94204.1| PROBABLE ATP SYNTHASE EPSILON CHAIN
           ATPC [Mycobacterium bovis subsp. bovis AF2122/97]
          Length = 121

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 38/101 (37%), Positives = 60/101 (58%), Gaps = 2/101 (1%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQM-KINRSHQEG 59
           MA+L V++V  D   +   A  +  RT  GE+GILP HI L+A L    M ++ R  ++ 
Sbjct: 1   MAELNVEIVAVDRNIWSGTAKFLFTRTTVGEIGILPRHIPLVAQLVDDAMVRVEREGEKD 60

Query: 60  VDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKE 100
           +  +AV+GG + V E+ V+I+A+SAE   +ID   A++  E
Sbjct: 61  LR-IAVDGGFLSVTEEGVSILAESAEFESEIDEAAAKQDSE 100
>gi|11467385|ref|NP_043242.1| ATP synthase CF1 epsilon chain
           [Cyanophora paradoxa]
 gi|1352037|sp|P48083|ATPE_CYAPA ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|7436135|pir||T06930 H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - Cyanophora paradoxa cyanelle
 gi|1016186|gb|AAA81273.1| epsilon subunit of the F1 portion of ATP
           synthase
          Length = 132

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 34/132 (25%), Positives = 70/132 (52%), Gaps = 6/132 (4%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L V+V+ P+ + +  +A  + + +  G +GIL  H  L   LN   MKI   ++ G   +
Sbjct: 3   LDVRVIAPNKVIWAKNAEEVILPSQSGMLGILTSHAPLYTALNTGVMKIR--NETGWTSI 60

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDE----MR 119
            V GG +EV +++V ++ ++ E   +IDL+ A++  E+A      A+  +  +E    ++
Sbjct: 61  VVMGGFVEVEKNEVLVLVNAGEYVDEIDLSAAKKDVEKALETFNSAEAPKEKEEAAEFLK 120

Query: 120 RAEVALRRAINR 131
            A+  L+  +++
Sbjct: 121 YAQARLKAVVDK 132
>gi|11497534|ref|NP_054942.1| ATP synthase CF1 epsilon chain
           [Spinacia oleracea]
 gi|114606|sp|P00833|ATPE_SPIOL ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|67865|pir||PWSPE H+-transporting two-sector ATPase (EC 3.6.3.14)
           epsilon chain - spinach chloroplast
 gi|343356|gb|AAA84627.1| ATPase epsilon subunit
 gi|7636115|emb|CAB88735.1| ATP synthase epsilon subunit [Spinacia
           oleracea]
          Length = 134

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW- 62
           L + V+TP+   ++     I + T  G++G+LP H      +++  ++I  + Q    W 
Sbjct: 3   LNLCVLTPNRSIWNSEVKEIILSTNSGQIGVLPNHAPTATAVDIGILRIRLNDQ----WL 58

Query: 63  -VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            +A+ GG   +  +++TI+ + AER  DID   A++  E AE  L KA+  +   E   A
Sbjct: 59  TLALMGGFARIGNNEITILVNDAERGSDIDPQEAQQTLEIAEANLRKAEGKRQKIE---A 115

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 116 NLALRRARTRV 126
>gi|32129413|sp|Q87E91|ATPE_XYLFT ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
          Length = 140

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 40/115 (34%), Positives = 61/115 (52%), Gaps = 1/115 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M+ +   +V+ +   +   A+ +      GE+GI P H  LI  L   ++ I   + E +
Sbjct: 1   MSTIRCDIVSAEQEIFHGEATFVVATGELGELGIAPKHAPLITRLKPGKVVITTVNGEQL 60

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNI 115
           D+ A++GGI+EV    VTI+ADSA RA  ID     +AKE AER L     T ++
Sbjct: 61  DF-AISGGILEVQPQVVTILADSAIRADTIDEVAVRKAKEEAERILANRGETIDV 114
>gi|22993903|ref|ZP_00038440.1| hypothetical protein [Xylella
           fastidiosa Dixon]
 gi|28198343|ref|NP_778657.1| ATP synthase epsilon chain [Xylella
           fastidiosa Temecula1]
 gi|28056413|gb|AAO28306.1| ATP synthase epsilon chain [Xylella
           fastidiosa Temecula1]
          Length = 143

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 40/115 (34%), Positives = 61/115 (52%), Gaps = 1/115 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M+ +   +V+ +   +   A+ +      GE+GI P H  LI  L   ++ I   + E +
Sbjct: 4   MSTIRCDIVSAEQEIFHGEATFVVATGELGELGIAPKHAPLITRLKPGKVVITTVNGEQL 63

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNI 115
           D+ A++GGI+EV    VTI+ADSA RA  ID     +AKE AER L     T ++
Sbjct: 64  DF-AISGGILEVQPQVVTILADSAIRADTIDEVAVRKAKEEAERILANRGETIDV 117
>gi|22797551|emb|CAD23993.1| ATP synthase epsilon subunit [Scaevola
           sp. Lundberg 55]
          Length = 132

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 39/131 (29%), Positives = 70/131 (52%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+   +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRKVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A +  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSGDIDPQEARQTLEIAEATLRKAEGKRQRIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|15642756|ref|NP_232389.1| ATP synthase F1, epsilon subunit
           [Vibrio cholerae]
 gi|20137514|sp|Q9KNH6|ATPE_VIBCH ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|11266754|pir||E82036 ATP synthase F1, epsilon chain VC2763
           [imported] - Vibrio cholerae (strain N16961 serogroup
           O1)
 gi|9657364|gb|AAF95902.1| ATP synthase F1, epsilon subunit [Vibrio
           cholerae]
          Length = 140

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 6/136 (4%)

Query: 1   MAQLT--VQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQE 58
           MA +T  + VV+ +   +        V   +GE+GI  GH  L+  +    ++I + H  
Sbjct: 1   MAAITFHLDVVSAEKKLFSGLVETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKLHGH 60

Query: 59  GVDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEM 118
             +++ V+GGI+EV     T++AD+A R  D+D  +AE AK RAE   E+        + 
Sbjct: 61  E-EYIYVSGGIVEVQPGTATVLADTAIRGEDLDAAKAEEAKRRAE---ERILNQHGDMDF 116

Query: 119 RRAEVALRRAINRISV 134
            +A   L +AI ++ V
Sbjct: 117 AQAASELAKAIAQLRV 132
>gi|22795893|emb|CAD22412.1| ATP synthase epsilon chain [Carpodetus
           serratus]
          Length = 132

 Score = 53.9 bits (128), Expect = 5e-07
 Identities = 37/131 (28%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I +D     I + T  G++G+LP H  +   +++  ++I  + +    W+
Sbjct: 2   LNLCVLTPNRIVWDSEVKEIVLSTNSGQIGVLPNHAPIATAVDIGILRIRLNDR----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++T++ + AE++ DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEITVLVNDAEKSDDIDPQEAQQTLEIAEANLRKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            ++L+RA  R+
Sbjct: 115 NLSLQRARTRV 125
>gi|27886882|gb|EAA24007.1| ATP synthase epsilon chain, sodium ion
          specific [Fusobacterium nucleatum subsp. vincentii ATCC
          49256]
          Length = 134

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 29/96 (30%), Positives = 55/96 (57%)

Query: 1  MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
          M+   V VVT      +  A  + +RT +G++GILP H   +A L++ +M+I   +++  
Sbjct: 1  MSSFNVSVVTQVKKILEQEAGYLRLRTSEGDIGILPNHAPFVAELSMGKMEIESPNKDRR 60

Query: 61 DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAE 96
          +   ++GG +E++ +QVTI+AD      +ID+   +
Sbjct: 61 NIYFLSGGFLEISNNQVTIIADEILPIEEIDIENEQ 96
>gi|22796290|emb|CAD23939.1| ATP synthase epsilon subunit [Gentiana
           purpurea]
          Length = 128

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 8   VVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AV 65
           V+TP+ I ++     I + T  G++G+LP H  +   +++  ++I    Q    WV  A+
Sbjct: 3   VLTPNRIVWNSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRIDAQ----WVTLAL 58

Query: 66  NGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVAL 125
            GG   +  +++ ++ + AE   DID   A++  E AE  L KAQ  +   E   A +AL
Sbjct: 59  MGGFARIGNNEILVLVNDAETGSDIDPQEAQQTLEIAEANLRKAQGKRQTIE---ANLAL 115

Query: 126 RRAINRI 132
           RRA  R+
Sbjct: 116 RRARTRV 122
>gi|22997188|ref|ZP_00041423.1| hypothetical protein [Xylella
           fastidiosa Ann-1]
          Length = 143

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 39/115 (33%), Positives = 61/115 (52%), Gaps = 1/115 (0%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M+ +   +V+ +   +   A+ +      GE+GI P H  LI  L   ++ I   + E +
Sbjct: 4   MSTIRCDIVSAEQEIFHGEATFVVATGELGELGIAPKHAPLITRLKPGKVVITTVNGEQL 63

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNI 115
           D+ A++GGI+EV    +TI+ADSA RA  ID     +AKE AER L     T ++
Sbjct: 64  DF-AISGGILEVQPQVITILADSAIRADTIDEVAVRKAKEEAERILANRGETIDV 117
>gi|19552436|ref|NP_600438.1| F0F1-type ATP synthase epsilon subunit
           [Corynebacterium glutamicum ATCC 13032]
 gi|20137470|sp|Q9ETA7|ATPE_CORGL ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|9757622|dbj|BAB08158.1| H+-ATPase epsilon subunit
           [Corynebacterium glutamicum]
 gi|10039453|dbj|BAB13361.1| H+-ATPase epsilon subunit
           [Brevibacterium flavum]
 gi|21323980|dbj|BAB98606.1| F0F1-type ATP synthase epsilon subunit
           (mitochondrial delta subunit) [Corynebacterium
           glutamicum ATCC 13032]
          Length = 124

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 40/126 (31%), Positives = 72/126 (56%), Gaps = 3/126 (2%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           MA++TV++V+ + + +   AS++T +T +GE+G+LP H  L+  L V    +     +G 
Sbjct: 1   MAEITVELVSVERMLWAGQASIVTAQTTEGEIGVLPDHEPLLGQL-VENGVVTIQPIDGE 59

Query: 61  DWVA-VNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMR 119
             +A V+ G + V++++VTI+AD A  A ++D   AE A   ++  L KA     +  +R
Sbjct: 60  KLIAGVSDGFLSVSKEKVTILADFAVWANEVDTASAE-ADLNSDDELAKAHAEAGLRAVR 118

Query: 120 RAEVAL 125
           R+   L
Sbjct: 119 RSSEGL 124
>gi|11466708|ref|NP_039304.1| ATP synthase CF1 epsilon chain
           [Marchantia polymorpha]
 gi|114600|sp|P06285|ATPE_MARPO ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|67864|pir||PWLVE H+-transporting two-sector ATPase (EC 3.6.3.14)
           epsilon chain - liverwort (Marchantia polymorpha)
           chloroplast
 gi|11678|emb|CAA28090.1| atpE [Marchantia polymorpha]
          Length = 135

 Score = 53.5 bits (127), Expect = 7e-07
 Identities = 30/107 (28%), Positives = 63/107 (58%), Gaps = 2/107 (1%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L ++++ P+ I ++     I + T  G++GILP H +++  L++  +KI  + Q     +
Sbjct: 2   LNLRIMAPNRIVWNSDIQEIILSTNSGQIGILPNHASVLTALDIGIVKIRLNDQWST--M 59

Query: 64  AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQ 110
           A+ GG   ++ + +TI+ + AE+A +ID   A+   ++A+  LE+A+
Sbjct: 60  ALMGGFAMIDNNNLTILVNDAEKASEIDYQEAQETFQKAKTNLEEAE 106
>gi|11466793|ref|NP_039389.1| ATP synthase CF1 epsilon chain [Oryza
           sativa (japonica cultivar-group)]
 gi|114601|sp|P12086|ATPE_ORYSA ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|67868|pir||PWRZE H+-transporting two-sector ATPase (EC 3.6.3.14)
           epsilon chain - rice chloroplast
 gi|11990|emb|CAA34002.1| unnamed protein product [Oryza sativa
           (japonica cultivar-group)]
 gi|343204|gb|AAA84589.1| atpE gene product
 gi|226611|prf||1603356AH ATPase epsilon
          Length = 137

 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 40/130 (30%), Positives = 72/130 (54%), Gaps = 4/130 (3%)

Query: 3   QLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW 62
           +L + V+TP  I +D     I + T  G++G+LP H  +   +++  ++I   + + +  
Sbjct: 2   KLNLYVLTPKRIIWDCEVKEIILSTNSGQIGVLPNHAPINTAVDMGPLRIRLLNDQWLTA 61

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
           V  +G    VN +++ I+ + AE   DID   A++A E AE  + +A+ T+   E+  A+
Sbjct: 62  VLWSGFARIVN-NEIIILGNDAELGSDIDPEEAQQALEIAEANVSRAEGTK---ELVEAK 117

Query: 123 VALRRAINRI 132
           VALRRA  R+
Sbjct: 118 VALRRARIRV 127
>gi|15677763|ref|NP_274927.1| ATP synthase F1, epsilon subunit
           [Neisseria meningitidis MC58]
 gi|20137497|sp|Q9JXQ3|ATPE_NEIMB ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|11266758|pir||F81024 ATP synthase F1, epsilon chain NMB1933
           [imported] - Neisseria meningitidis (strain MC58
           serogroup B)
 gi|7227191|gb|AAF42262.1| ATP synthase F1, epsilon subunit
           [Neisseria meningitidis MC58]
          Length = 140

 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 44/140 (31%), Positives = 80/140 (56%), Gaps = 3/140 (2%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M+ + V+VV+ +   Y   A+ I V T  GE+GI P H  +++ +    +++    ++  
Sbjct: 1   MSIMQVEVVSSEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSLVRPGALRLTVPGEDKE 60

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
             VAV+GG++EV  D+VT++AD A R+ ++D  RAE AK+ AE  + +A+  + + E  +
Sbjct: 61  VLVAVSGGVLEVQPDKVTVLADVAVRSAEMDRARAEEAKKAAEAGISQAKDDKALAEAHK 120

Query: 121 ---AEVALRRAINRISVGKK 137
              A +A  + ++ I   KK
Sbjct: 121 VLAAAIAQLKTLDYIRSHKK 140
>gi|23018729|ref|ZP_00058443.1| hypothetical protein [Thermobifida
           fusca]
          Length = 137

 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 38/106 (35%), Positives = 65/106 (60%), Gaps = 6/106 (5%)

Query: 3   QLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHI---NLIAPLNVHQMKINRSHQEG 59
           +L V++VTP+   +     ++  +T +GE+GI PGH+    L+AP +V  +++  + + G
Sbjct: 6   KLFVELVTPERELWAGEGDMVIAKTVEGEIGIQPGHVPVLALLAPGSV--VRVLGARESG 63

Query: 60  VDWVAVNGGIIEVN-EDQVTIVADSAERARDIDLNRAERAKERAER 104
               AV+GG + V   D+V+I+A+ AE A +ID+ RA  A + AER
Sbjct: 64  EVRAAVHGGFMSVTLSDRVSILAEIAELAEEIDVERARAALKSAER 109
>gi|27904522|ref|NP_777648.1| ATP synthase epsilon chain [Buchnera
           aphidicola (Baizongia pistaciae)]
 gi|31076613|sp|Q89B38|ATPE_BUCBP ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|27903919|gb|AAO26753.1| ATP synthase epsilon chain [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
          Length = 145

 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 7/119 (5%)

Query: 5   TVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWVA 64
           ++ VV+ + I ++     I V   +GE+GI PGH+ L++ +    + I   H +    + 
Sbjct: 8   SLNVVSFEKIIFNDFVKKIQVSGSEGELGIYPGHLQLLSLIKPGPLLILDDH-DYQHVIY 66

Query: 65  VNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEV 123
           ++GGIIEV    V+I+AD+A R  D+DLN     K + E  +       N+D + R +V
Sbjct: 67  ISGGIIEVQPTVVSILADTAIRGLDLDLNVVLDKKLKLENKI------SNVDCIDRNDV 119
>gi|15793518|ref|NP_283340.1| ATP synthase epsilon chain
          [Neisseria meningitidis Z2491]
 gi|20137496|sp|Q9JW69|ATPE_NEIMA ATP synthase epsilon chain (ATP
          synthase F1 sector epsilon subunit)
 gi|11266756|pir||D81970 H+-transporting two-sector ATPase (EC
          3.6.3.14) epsilon chain NMA0520 [imported] - Neisseria
          meningitidis (strain Z2491 serogroup A)
 gi|7379263|emb|CAB83812.1| ATP synthase epsilon chain [Neisseria
          meningitidis Z2491]
          Length = 140

 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 30/91 (32%), Positives = 56/91 (60%)

Query: 1  MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
          M+ + V+VV+ +   Y   A+ I V T  GE+GI P H  +++ + +  +++    ++  
Sbjct: 1  MSIMQVEVVSSEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSLVRLGALRLTVLGEDKE 60

Query: 61 DWVAVNGGIIEVNEDQVTIVADSAERARDID 91
            VAV+GG++EV  D+VT++AD A R+ ++D
Sbjct: 61 VLVAVSGGVLEVQPDKVTVLADVAVRSAEMD 91
>gi|114603|sp|P26534|ATPE_PYLLI ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|67863|pir||PWPFEL H+-transporting two-sector ATPase (EC
           3.6.3.14) epsilon chain - brown alga (Pylaiella
           littoralis) chloroplast
 gi|14182|emb|CAA42900.1| epsilon subunit of AIPase [Pylaiella
           littoralis]
          Length = 132

 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 6/114 (5%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW- 62
           L ++V+ PDG+ +D  A  + + +  G++GIL GH  LI  L +  ++I  + +    W 
Sbjct: 3   LNIRVIAPDGLIWDTTAEGVVLPSLTGQLGILTGHAPLITSLEIGILRIKTNSK----WT 58

Query: 63  -VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNI 115
            + V GG   + +D+V ++    E     D ++A+    +A+  L+ A+TT+ I
Sbjct: 59  PIIVLGGFAVIKDDEVLVLISGVEEVIKEDYSKAKSILAKAKIDLDSAKTTKEI 112
>gi|19920170|gb|AAM08602.1|AC092750_36 Putative atpE; ATPase epsilon
           subunit from chromosome 10 chloroplast insertion [Oryza
           sativa (japonica cultivar-group)]
 gi|21327362|gb|AAM48267.1|AC122148_20 Putative atpE; ATPase epsilon
           subunit from chromosome 10 chloroplast insertion [Oryza
           sativa (japonica cultivar-group)]
 gi|31431483|gb|AAP53256.1| putative atpE; ATPase epsilon subunit
           from chromosome 10 chloroplast insertion [Oryza sativa
           (japonica cultivar-group)]
          Length = 137

 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 4/130 (3%)

Query: 3   QLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDW 62
           +L + V+TP  I +D     I + T  G++G+LP H  +   +++  ++I   + + +  
Sbjct: 2   KLNLYVLTPKRIIWDCEVKEIILSTNSGQIGVLPNHAPINTAVDMGPLRIRLLNDQWLTA 61

Query: 63  VAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAE 122
           V +  G   +  +++ I+ + AE   DID   A++A E AE  + +A+ T+   E+  A+
Sbjct: 62  V-LWSGFARIINNEIIILGNDAELGSDIDPEEAQQALEIAEANVSRAEGTK---ELVEAK 117

Query: 123 VALRRAINRI 132
           VALRRA  R+
Sbjct: 118 VALRRARIRV 127
>gi|22797547|emb|CAD23983.1| ATP synthase epsilon subunit
           [Pittosporum undulatum]
          Length = 132

 Score = 52.8 bits (125), Expect = 9e-07
 Identities = 38/131 (29%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+   +D   + I + T  G++G+LP H ++   +++  ++I  + Q    W+
Sbjct: 2   LNLCVLTPNRTVWDSKVNEIILSTNSGQIGVLPDHASIATAVDIGILRIRLNGQ----WL 57

Query: 64  --AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
             A+ GG   +  +++ I+ + AE++ DID   A++  E AE  L KA+  +   E   A
Sbjct: 58  TMALMGGFARIGNNEIXILVNDAEKSSDIDSQEAQQTLEIAEANLRKAEGKRQKIE---A 114

Query: 122 EVALRRAINRI 132
            +A RRA  R+
Sbjct: 115 NLAXRRARTRV 125
>gi|24376218|ref|NP_720262.1| ATP synthase F1, epsilon subunit
           [Shewanella oneidensis MR-1]
 gi|24351278|gb|AAN57705.1|AE015907_3 ATP synthase F1, epsilon
           subunit [Shewanella oneidensis MR-1]
          Length = 142

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 44/137 (32%), Positives = 74/137 (53%), Gaps = 8/137 (5%)

Query: 1   MAQLTVQ--VVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQE 58
           MA +TVQ  +V+ +   +    + + V   +GE+GI+ GH  L++ +     +I +  Q+
Sbjct: 1   MAAMTVQLDIVSAESSIFSGRVASLQVTGSEGELGIMHGHAPLLSYIKPGMARIVK--QD 58

Query: 59  GVDWV-AVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDE 117
           G + V  ++GG++EV    V+++AD   RA+DID   A  AK RAE  +  A    N D 
Sbjct: 59  GNEEVFYLSGGLLEVQPSSVSVLADVVMRAKDIDEQAALEAKRRAEAHMATAGADFNYDA 118

Query: 118 MRRAEVALRRAINRISV 134
              A V L +A+ ++ V
Sbjct: 119 ---AMVELAKAMAQLRV 132
>gi|22796605|emb|CAD23918.1| ATP synthase epsilon subunit [Halesia
           carolina]
          Length = 122

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 37/121 (30%), Positives = 66/121 (53%), Gaps = 9/121 (7%)

Query: 14  IRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV--AVNGGIIE 71
           I +D     I + T  G++G+LP H  +   +++  ++I  + Q    W+  A+ GG   
Sbjct: 2   IVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQ----WLTMALMGGFAR 57

Query: 72  VNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALRRAINR 131
           +  +++T++ + AE+  DID   A++  E AE  L+KA+  + I E   A +ALRRA  R
Sbjct: 58  IGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKKAEGKRQIIE---ANLALRRARTR 114

Query: 132 I 132
           +
Sbjct: 115 V 115
>gi|18311168|ref|NP_563102.1| ATP synthase epsilon subunit
           [Clostridium perfringens]
 gi|20137356|sp|Q8XID5|ATPE_CLOPE ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|18145851|dbj|BAB81892.1| ATP synthase epsilon subunit
           [Clostridium perfringens str. 13]
          Length = 133

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 40/134 (29%), Positives = 70/134 (51%), Gaps = 4/134 (2%)

Query: 1   MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGV 60
           M +  + V TP+ +      S +  +   GE  IL GH   +        +I+  + E  
Sbjct: 1   MNKFKLIVTTPERVLISGEVSRVLCKNAVGEFEILAGHQPYLTATVPTVTRIDDENGES- 59

Query: 61  DWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRR 120
            ++  + G+++V  ++VT   +SAE   +ID  RA  AK+RAE  L+    T  +DE +R
Sbjct: 60  KYLFTSTGLMKVQNNEVTFCVNSAEWPEEIDEARAMNAKQRAEERLK--NKTDELDE-KR 116

Query: 121 AEVALRRAINRISV 134
           A++AL RA++R+ +
Sbjct: 117 AKLALARAMSRLKL 130
>gi|30352040|ref|NP_848066.1| ATP synthase CF1 epsilon chain
           [Adiantum capillus-veneris]
 gi|30266719|gb|AAP29398.1| ATP synthase CF1 epsilon chain [Adiantum
           capillus-veneris]
          Length = 132

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 5/125 (4%)

Query: 8   VVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWVAVNG 67
           V+ P+ I ++     I + T  G++GILP H  L+A L++  +KI    Q     +A  G
Sbjct: 7   VMAPNRIVWNSEVWEIILSTNSGQIGILPNHAPLLAALDMGVLKIRSDKQWSA--MAPMG 64

Query: 68  GIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRAEVALRR 127
           G   ++ ++V I+ + AERA +ID   A ++ + A+  L +A+  + + E   A +  +R
Sbjct: 65  GFAMIDNNRVIILVNEAERASEIDPEEARKSFQTAQAELAEAEGRRKLIE---ANLTFKR 121

Query: 128 AINRI 132
           A  R+
Sbjct: 122 AKARL 126
>gi|32265929|ref|NP_859961.1| FoF1-type ATP synthase [Helicobacter
          hepaticus ATCC 51449]
 gi|32261978|gb|AAP77027.1| FoF1-type ATP synthase [Helicobacter
          hepaticus ATCC 51449]
          Length = 131

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 3/85 (3%)

Query: 1  MAQLTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKI-NRSHQEG 59
          M  LT+ +VTP G  Y+     + +   +GE G+ PGH NL++ L V  ++  N    +G
Sbjct: 1  MENLTLSIVTPYGSIYNGEVKYVVIPGSEGEFGVFPGHCNLLSLLKVGVIEFENLEGNKG 60

Query: 60 VDWVAVNGGIIEVNEDQVTIVADSA 84
          +  VA+N G  ++++  V I+AD A
Sbjct: 61 L--VAINWGHAQISDTDVNIIADGA 83
>gi|22797564|emb|CAD22880.1| ATP synthase epsilon subunit [Paeonia
           veitchii]
          Length = 132

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 36/131 (27%), Positives = 70/131 (52%), Gaps = 9/131 (6%)

Query: 4   LTVQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQEGVDWV 63
           L + V+TP+ I ++     I + T  G++G+LP H  +   +++  ++I  + +    W+
Sbjct: 2   LNLCVLTPNRIVWNSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDR----WL 57

Query: 64  AVN--GGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAERALEKAQTTQNIDEMRRA 121
            +   GG   +  +++T++ + AE+  DID   A +  E AE  ++KA+  +   E   A
Sbjct: 58  TMTLMGGFARIGNNEITVLVNDAEKGSDIDPQEARQTLEIAEANVKKAEGKRQTIE---A 114

Query: 122 EVALRRAINRI 132
            +ALRRA  R+
Sbjct: 115 NLALRRARTRV 125
>gi|18146852|dbj|BAB82485.1| F0F1-ATPase subunit epsilon [Colwellia
           maris]
          Length = 140

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 38/106 (35%), Positives = 60/106 (55%), Gaps = 5/106 (4%)

Query: 1   MAQLTV--QVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQE 58
           MA LTV   VV+ +   +      + +   +GE+GI+PGH  L+  L      I +  ++
Sbjct: 1   MALLTVNLNVVSAEESLFSGSIKSLQITGSEGELGIMPGHAPLLTSLKPGMALITK--KD 58

Query: 59  GVDWVA-VNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAE 103
           G + V  ++GG++EV  + VT++AD A RA D+D   A  AK+RAE
Sbjct: 59  GSEEVIYLSGGMLEVQPNNVTVLADIATRAADLDEQAALEAKQRAE 104
>gi|27364455|ref|NP_759983.1| ATP synthase F1, epsilon subunit
           [Vibrio vulnificus CMCP6]
 gi|31339983|sp|Q8DDG7|ATPE_VIBVU ATP synthase epsilon chain (ATP
           synthase F1 sector epsilon subunit)
 gi|27360574|gb|AAO09510.1|AE016800_115 ATP synthase F1, epsilon
           subunit [Vibrio vulnificus CMCP6]
          Length = 140

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 34/105 (32%), Positives = 58/105 (54%), Gaps = 3/105 (2%)

Query: 1   MAQLT--VQVVTPDGIRYDHHASLITVRTPDGEMGILPGHINLIAPLNVHQMKINRSHQE 58
           MA +T  + VV+ +   +        V   +GE+GI  GH  L+  +    ++I + H E
Sbjct: 1   MAAITFHLDVVSAEKKIFSGRVETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKLHGE 60

Query: 59  GVDWVAVNGGIIEVNEDQVTIVADSAERARDIDLNRAERAKERAE 103
             +++ V+GGI+EV     T++AD+A R  ++D  +AE AK RA+
Sbjct: 61  E-EFIYVSGGIVEVQPGTATVLADTAIRGEELDAAKAEEAKRRAK 104
  Database: nr
    Posted date:  Aug 11, 2003  9:58 AM
  Number of letters in database: 479,114,161
  Number of sequences in database:  1,487,057
  
Lambda     K      H
   0.317    0.133    0.365 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,900,710
Number of Sequences: 1487057
Number of extensions: 4180725
Number of successful extensions: 16539
Number of sequences better than 1.0e-04: 296
Number of HSP's better than  0.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 237
Number of HSP's that attempted gapping in prelim test: 16158
Number of HSP's gapped (non-prelim): 300
length of query: 137
length of database: 479,114,161
effective HSP length: 113
effective length of query: 24
effective length of database: 311,076,720
effective search space: 7465841280
effective search space used: 7465841280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 108 (46.2 bits)