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| UGID:2874122 UniGene Str.66747 Xenopus tropicalis (western clawed frog) actc1 |
Order cDNA clone,
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Actin, alpha, cardiac muscle 1 (actc1), mRNA (actc1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
| Reference Protein | Species | Id(%) | Len(aa) |
|
NP_033738.1 |
actin, alpha, cardiac muscle 1 |
M. musculus |
100.0 |
376 |
|
NP_062056.1 |
actin alpha cardiac 1 |
R. norvegicus |
100.0 |
376 |
|
XP_001370562.1 |
PREDICTED: similar to alpha-cardiac actin |
M. domestica |
100.0 |
376 |
|
NP_001002066.1 |
cardiac muscle alpha actin 1 |
D. rerio |
100.0 |
376 |
|
NP_001085220.1 |
hypothetical protein LOC432314 |
X. laevis |
100.0 |
376 |
|
NP_989094.1 |
actin, alpha, cardiac muscle 1 |
X. tropicalis |
100.0 |
376 |
|
XP_421217.2 |
PREDICTED: similar to alpha-cardiac actin |
G. gallus |
100.0 |
376 |
|
XP_001088312.1 |
PREDICTED: similar to Actin, alpha cardiac (Alpha-cardiac actin) isoform 2 |
M. mulatta |
100.0 |
376 |
|
XP_001135141.1 |
PREDICTED: similar to alpha-cardiac actin isoform 2 |
P. troglodytes |
100.0 |
376 |
|
NP_005150.1 |
cardiac muscle alpha actin 1 proprotein |
H. sapiens |
100.0 |
376 |
|
XP_535424.1 |
PREDICTED: similar to Actin, alpha cardiac (Alpha-cardiac actin) isoform 3 |
C. lupus familiaris |
100.0 |
376 |
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XP_001503700.1 |
PREDICTED: actin, alpha, cardiac muscle 1 |
E. caballus |
100.0 |
376 |
|
XP_001924531.1 |
PREDICTED: actin, alpha, cardiac muscle 1 |
S. scrofa |
100.0 |
376 |
|
NP_001029757.1 |
cardiac muscle alpha actin 1 |
B. taurus |
100.0 |
376 |
|
NP_001133115.1 |
fast myotomal muscle actin 2 |
S. salar |
99.7 |
376 |
|
NP_001098276.1 |
muscle actin OlMA1 |
O. latipes |
99.7 |
376 |
|
NP_001095152.1 |
alpha-smooth muscle actin |
O. cuniculus |
99.7 |
376 |
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NP_508841.1 |
ACTin family member (act-4) |
C. elegans |
95.7 |
375 |
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NP_511052.1 |
Actin 5C CG4027-PB, isoform B |
D. melanogaster |
95.2 |
375 |
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XP_001699068.1 |
actin |
C. reinhardtii |
93.4 |
376 |
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NP_187818.1 |
ACT11 (ACTIN-11); structural constituent of cytoskeleton |
A. thaliana |
91.8 |
376 |
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NP_116614.1 |
Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions; Act1p |
S. cerevisiae |
89.3 |
374 |
|
XP_961133.2 |
actin |
N. crassa |
88.0 |
374 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
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Restricted Expression: |
heart [show more like this] |
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cDNA Sources: |
whole body; heart; limb; head; tail; skeletal muscle; brain; intestine |
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (2)
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BC062494.1 |
Xenopus tropicalis actin, alpha, cardiac muscle 1, mRNA (cDNA clone MGC:75679 IMAGE:5380133), complete cds |
PAM |
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NM_203763.1 |
Xenopus tropicalis actin, alpha, cardiac muscle 1 (actc1), mRNA |
PA |
EST sequences (10 of 860) [Show all sequences]
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AL637063.2 |
Clone TNeu003d22 |
whole body |
5' read |
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AL642139.2 |
Clone TNeu024j15 |
whole body |
5' read |
PM |
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AL641931.2 |
Clone TNeu022c04 |
whole body |
5' read |
PM |
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AL643528.2 |
Clone TNeu015k09 |
whole body |
5' read |
PM |
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AL650614.2 |
Clone TNeu028j16 |
whole body |
5' read |
PM |
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AL655510.2 |
Clone TNeu031i20 |
whole body |
5' read |
PM |
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AL658244.2 |
Clone TNeu044c22 |
whole body |
5' read |
PM |
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AL661542.2 |
Clone TNeu036h17 |
whole body |
5' read |
PM |
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AL675401.2 |
Clone TNeu057i10 |
whole body |
5' read |
PM |
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AL776274.2 |
Clone TNeu076l10 |
whole body |
5' read |
PM |
Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
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