A graphical extension for the Windows version of the Parallel Finite Element Micromagnetics Package (MagParExt), Tomasz Blachowicz and Bartlomiej Baron, 2008. BibTeX
Field induced vortex dynamics in magnetic Ni nanotriangles, R. Y. Jaafar, A Asenjo, O Chubykalo-Fesenko, M Vazquez, E M Gonzalez, and J L Vicent, Nanotechnology, 19, 2008. BibTeX
Micromagnetic Simulation of Magnetic Particles with Surface Anisotropy, Lin Yuan, Jianjun Jiang, Gang Du, Zhongyou Wang, and Huahui He, Journal of the Magnetics Society of Japan, 32, 50-53, 2008. BibTeX
Magnetic strip patterns induced by focused ion beam irradiation, D. Makarov, S. Tibus, C. T. Rettner, T. Thomson, B. D. Terris, T. Schrefl, and M. Albrecht, J. Appl. Phys., 103, 2008. BibTeX
Patterning of magnetic films by focused ion beam irradiation, S. Tibus, D. Makarov, C. T. Rettner, T. Thomson, B. D. Terris, T. Schrefl, and M. Albrecht, Intermag 2008 paper no. CM-05, submitted to IEEE Trans. Magn., 2008. BibTeX
Micromagnetic simulation of the magnetic dispersion angle and effective damping factor for the single-phase soft magnetic films, Lin Yuan, Jianju Jiang, Yongjiang di, Shaowei Bie, and Huahui He, J. Magn. Magn. Mater., 320, 7, 1393-1397. BibTeX
Micromagnetic simulation and experimental study on microwave permeability of nano-magnetic films, DENG Lian-wen, HUANG Xiao-zhong, ZH0U Ke-sheng, and YANG, Transactions of Nonferrous Metals Society of China, 756-759, 2007. BibTeX
Micromagnetic Simulation of Magnetic Particles with Surface Anisotropy, Lin Yuan, Jianjun Jiang, Gang Du, Zhongyou Wang, and Huahui He, Journal of the Magnetics Society of Japan, 32, 50-53, 2008. BibTeX
Micromagnetic study of magnetization reversal in patterned DyFeCo thin films, Ching-Ming Lee, L. X. Ye, J. M. Lee, and Te-Ho Wu, Phys. Stat. Sol., 204, 12, 4049-4052, 2007. BibTeX
Micromagnetic Simulations of Magnetic Recording Media, Simon Greaves, High Performance Computing on Vector Systems 2007. BibTeX
Magnetic Configurations and Phase Diagrams of sub-100 nm NiFe Nanorings, Nadjib Benatmane, Werner Scholz, and T.W. Clinton, IEEE Trans. Magn., 43, 2884-2886, 2007. BibTeX
A Systematic Approach to Multiphysics Extensions of Finite-Element-Based Micromagnetic Simulations: Nmag., T. Fischbacher, M. Franchin, G. Bordignon, and H. Fangohr, IEEE Trans. Magn. Volume, 43, 2896-2898. BibTeX
The Science of Hysteresis, R. Dittrich, J. Fidler, D. Suess, W. Schol, and H. Forster, T. Schrefl. BibTeX
Handbook of Theoretical and Computational Nanotechnology, J. Fidler, T. Schrefl, and W. Scholz. BibTeX
Handbook of Magnetism and Advanced Magnetic Materials, Thomas Schrefl, Gino Hrkac, Simon Bance, Dieter Suess, Otmar Ertl, and Josef Fidler. BibTeX
Handbook of Magnetic Materials, D. Suess, J. Fidler, and T. Schrefl. BibTeX
Writer Flux Closure and Transition Degradation Mechanism in Perpendicular Recording., J. Fernandez-de-Castro, Xiao Shen, Jianhua Xue, Yuming Zhou, and S. Sharma, IEEE Trans. Magn. Volume, 43, 2175-2177. BibTeX
Effect of write current waveform on magnetization and head field dynamics of perpendicular recording heads, W. Scholz and S. Batra, IEEE Trans. Magn., 42, 2264--2266, 2006. BibTeX
Effect of thermal fluctuation field on the noise performance of a perpendicular recording system, S. Batra, W. Scholz, and T. Roscamp, J. Appl. Phys., 99, 2006. BibTeX
Micromagnetic simulations of the dependence of domain wall width with grain size in systems with cubic and uniaxial anisotropy., F. Johnson, S. Amancherla, G.J. Parker, L.E. Iorio, and P.R. Subramanian, Intermag 2006 Conference. BibTeX
A Micromagnetic Study of the Effect of Spatial Variations in Damping in Perpendicular Recording Heads, A. Kaya, M. Benakli, M.L. Mallary, and J.A. Bain, IEEE Trans. Magn., 42, 2428--2430, 2006. BibTeX
Control of Domain Wall Motion in Permalloy Ring, C. C. Chang, Y. C. Chang, C. M. Lee, C. C. Chen, and J. Wu, IEEE Trans. Magn., 42, 2960--2962, 2006. BibTeX
Micromagnetic modelling of ferromagnetic cones, Richard P. Boardman, Hans Fangohr, Matthew J. Fairman, J. Zimmermann, Simon J. Cox, Alexander A. Zhukov, and Peter A.J. de Groot, J. Magn. Magn. Mater., 312, 234-238, 2007. BibTeX
Computer simulation studies of magnetic nanostructures, Richard Boardman, 2005. BibTeX
MPI Performance Analysis Tools on Blue Gene/L, I-Hsin Chung, Robert E. Walkup, Hui-Fang Wen, and Hao Yu, ACM/IEEE SC 2006 Conference (SC'06), 2006. BibTeX
A Case Study Using Automatic Performance Tuning for Large-Scale Scientific Programs, I.-H. Chung and J.K. Hollingsworth, High Performance Distributed Computing, 2006 15th IEEE International Symposium, 45--56. BibTeX
Multibit MRAM using a pair of memory cells, C. K. Lim, Y. S. Kim, N. Y. Park, and J. Lee, IEEE Trans. Magn., 41, 2670-2672, 2005. BibTeX
Vortex state oscillations in soft magnetic cylindrical dots, K. Yu. Guslienko, W. Scholz, R. W. Chantrell, and V. Novosad, Phys. Rev. B, 71, 2005. BibTeX
Nonlinear Magnetization Dynamics in Thin-Films and Nanoparticles, Massimiliano d'Aquino. BibTeX
Micromagnetic Simulations of Domainstructures in Softmagnetic Thin Films, T. Schrefl, W. Scholz, R. Dittrich, H. Forster, D. Suess, M. Stehno, and J. Fidler. BibTeX
Effect of write current waveform on magnetization and head field dynamics of perpendicular recording heads, W. Scholz and S. Batra, Intermag 2006 Conference, San Diego, CA, paper no. EF-03. BibTeX
Micromagnetic Simulation of Head Field and Write Bubble Dynamics in Perpendicular Recording, W. Scholz and S. Batra, IEEE Trans. Magn., submitted, 2005. BibTeX
Micromagnetic Modeling of Head Field Rise Time for High Data-Rate Recording, W. Scholz and S. Batra, IEEE Trans. Magn., 41, 702-706, 2005. BibTeX
Micromagnetic Analysis of Fast Precessional Switching, M. d'Aquino, W. Scholz, T. Schrefl, C. Serpico, and J. Fidler, J. Magn. Magn. Mater., 290-291, 510-513, 2005. BibTeX
Numerical and analytical study of fast precessional switching, M. d'Aquino, W. Scholz, T. Schrefl, C. Serpico, and J. Fidler, J. Appl. Phys., 95, 7055-7057, 2004. BibTeX
Multiprocessing of the Time Domain Analysis of Thin-Wire Antennas and Scatterers, E. M. Garzon, S. Tabik, I. Garcia, and A. R. Bretones, 12th Euromicro Conference on Parallel, Distributed and Network-Based Processing (PDP'04), 80--, 2004. BibTeX
Analysis of fast precessional switching in magnetic thin films, M. d'Aquino, W. Scholz, T. Schrefl, C. Serpico, and G. Miano, Proceedings of PIERS (Progress In Electromagnetic Research Symposium), 257-260, 2004. BibTeX
Numerical Micromagnetic Simulation of Fe-Pt Nanoparticles with Multiple Easy Axes, W. Scholz, J. Fidler, T. Schrefl, D. Suess, H. Forster, R. Dittrich, and V. Tsiantos, J. Magn. Magn. Mater., 1524-1525, 2004. BibTeX
Micromagnetic simulation studies of ferromagnetic part-spheres, Richard Boardman, Juergen Zimmermann, Hans Fangohr, Alexander Zhukov, and Peter de Groot, Journal of Applied Physics, 2005. BibTeX
High Density Magnetic Random Access Memory Using a Pair of Asymmetrical Cell, C. K. Lim, Y. S. Kim, N. Y. Park, and J. Lee, IEEE Trans. Magn., submitted. BibTeX
Micromagnetic simulation of magnetization reversal in small particles with surface anisotropy, W. Scholz, D. Suess, T. Schrefl, and and J. Fidler, J. Appl. Phys., 95, 6807-6809, 2004. BibTeX
Micromagnetic simulation of the pinning and depinning process in permanent magnets, W. Scholz, T. Schrefl, J. Fidler, T. Matthias, D. Suess, and V. Tsiantos, IEEE Trans. Magn., 39, 2920-2922, 2003. BibTeX
Transition from single-domain to vortex state in soft magnetic cylindrical nanodots, W. Scholz, K. Y. Guslienko, V. Novosad, D. Suess, T. Schrefl, R. W. Chantrell, and J. Fidler, J. Magn. Magn. Mater., 266, 155-163, 2003. BibTeX
Scalable Parallel Micromagnetic Solvers for Magnetic Nanostructures, W. Scholz, J. Fidler, T. Schrefl, D. Suess, R. Dittrich, H. Forster, and V. Tsiantos, Comp. Mat. Sci, 28, 366--383, 2003. BibTeX
Scalable Parallel Micromagnetic Solvers for Magnetic Nanostructures, W. Scholz, 2003. BibTeX
Implementation of a high performance parallel finite element micromagnetics package, W. Scholz, D. Suess, R. Dittrich, T. Schrefl, V. Tsiantos, H. Forster, and J. Fidler, J. Magn. Magn. Mater., 2004. BibTeX
Numerical Treatment of Multiphase Flows in Porous Media, Lecture Notes in Physics, vol. 552, W. Zhang and I. Gladwell, 2000. BibTeX
Combined Atomistic and Mesoscale simulation of grain growth in nanocrystalline thin films, A. J. Haslan, D. Moldovan, S. R. Phillpot, and V. Yamakov, Phil. Mag. A, 2003. BibTeX
Mesoscopic simulation of two dimensional grain growth with anisotropic grain-boundary properties, A. J. Haslan, D. Moldovan, S. R. Phillpot, and H. Gleiter, Computational Materials Science, 23, 15--32, 2001. BibTeX
Role of grain rotation in grain growth by mesoscale simulation, D. Moldovan, S. R. Phillpot, and A. J. Haslan, Phil. Mag. A, 82, 1271--1297, 2002. BibTeX
Bidimensional Study of the Maxwell-Bloch Model in a Nonlinear Crystal, Olivier Saut, SIAM Journal on Scientific Computing, submitted, 2004. BibTeX
Parallel implementation of the accelerated BEM approach for EMSI of the human brain, Y. Ataseven, Z. Akaliota n-Acar, C. E. Acar, and N. G. Gen\ccer, Medical and Biological Engineering and Computing, doi 10.1007/s11517-008-0316-0, 2008. BibTeX
Finite-element simulation of cooling of realistic 3-D human head and neck, B. H. Dennis, R. C. Eberhart, G. S. Dulikravich, and S.W. Radons, J Biomech Eng, 125, 6, 832-840, 2003. BibTeX
Computation of currents induced by ELF electric fields in anisotropic human tissues using the Finite Integration Technique, V. C. Motrescu and U. van Rienen, Advances in Radio Science, 3, 227--231, 2005. BibTeX
Computation of electrostatic fields in anisotropic human tissues using the Finite Integration Technique (FIT), V. C. Motrescu and U. van Rienen, Advances in Radio Science, 2, 309--313, 2004. BibTeX
Computational arterial flow modeling using a parallel Navier-Stokes solver, Enzo A. Dari, Mariano I. Cantero, and Raul A. Feijoo, ECCOMAS2000, 2000. BibTeX
Parallel Simulation Engines for Whole-Cell Models, Markus Schwehm, Nils Gehlenborg, Hendrik Post, Amelie Stein, and Kirstin Weber, University of Tubingen, ZBIT - Zentrum fur Bioinformatik Tubingen, Poster at Second International Conference on Systems Biology (ICSB) 2001, 2001. BibTeX
Ultrascalable Implicit Finite Element Analyses in Solid Mechanics with over a Half a Billion Degrees of Freedom, M. F. Adams, Harun H. Bayraktar, Tony M. Keaveny, and Panayiotis Papadopoulos, Proceedings of SC04, Winner of Gordon Bell Special Prize at SC2004: Large scale trabecular bone finite element modeling. BibTeX
Applications of Algebraic Multigrid to Large-Scale Finite Element Analysis of Whole Bone Micro-Mechanics on the IBM SP, Adams, M. F., Bayraktar, H.H., Keaveny, T.M., and Papadopoulos, P., ACM/IEEE Proceedings of SC2003: High Performance Networking and Computing, 2003. BibTeX
Parallel Multiscale Gauss-Newton-Krylov Methods For Inverse Wave Propagation, Volkan Akcelik, George Biros, and Omar Ghattas, Procceedings of SC2002, Winner of SC2002 Best Paper. A parallel algorithm for inverse problems governed by time-dependent PDEs, and scalability results for an inverse wave propagation problem of determining the material field of an acoustic medium. Using the algorithm, they solved a synthetic inverse wave propagation problem though a pelvic bone geometry involving 2.1 million inversion parameters in 3 hours on 256 processors., 2002. BibTeX
A Parallel Dynamic-Mesh Lagrangian Method for Simulation of Flows with Dynamic Interfaces, J. Antaki, G. Belloch, O. Ghattas, I. Malcevic, G. Miller, and N. Walkington, Procceedings of SC2000, Blood flow modeling at the microscale including effects on individual blood cells, for designing heart assist pumps, etc., 2000. BibTeX
Complex Systems in Biomedicine, P. Colli Franzone, L. F. Pavarino, and G. Savare, 2006. BibTeX
Determining recovery times from transmembrane action potentials and unipolar electrograms in normal heart tissue, P. Colli Franzone, L. F. Pavarino, S. Scacchi, and B. Taccardi, FIMH07, 139--149, 2007. BibTeX
Monodomain Simulations of Excitation and Recovery in Cardiac Blocks with Intramural Heterogeneity, Luca F. Pavarino, Piero Colli Franzone, and Bruno Taccardi, Functional Imaging and modeling of the Heart (FIMH05), 267--277, 2005. BibTeX
On the order of accuracy of the immersed boundary method: Higher order convergence rates for sufficiently smooth problems, Boyce E. Griffith and Charles S. Peskin, Journal of Computational Physics, 208, 75--105, 2005. BibTeX
Simulating the blood-muscle-valve mechanics of the heart by an adaptive and parallel version of the immersed boundary method, Boyce Griffith, 2005. BibTeX
Parallel Algorithms and Software for Time-Dependent System of Nonlinear Partial Differential Equations with an Application in Computational Biology, Maria S. Murillo, 2002. BibTeX
Parallel multigrid preconditioner for the cardiac bidomain model, Rodrigo Weber Dos Santos, G. Plank, and S. Bauer, IEEE Trans. Biomed. Eng, 51, 1960--1968, 2004. BibTeX
Computational Tools for Modeling Electrical Activity in Cardiac Tissue, E. J. Vigmond, M. Hughes, and G. Plank, L.J. Leon, J. Electrocardiol., 36, 69--74, 2003. BibTeX
Preconditioning Techniques for the Bidomain Equations, Rodrigo Weber Dos Santos, G. Plank, S. Bauer, and and E.J. Vigmond, Proceedings of the 15th International Conference on Domain Decomposition Methods, 571--580, 2003. BibTeX
A parallel solver for reaction-diffusion systems in computational electrocardiology, P. Colli Franzone and L. F. Pavarino, Mathematical Models and Methods in Applied Sciences, 14, 6, 883--912, 2004. BibTeX
Simulating patterns of excitation, repolarization and action potential durationwith cardiac Bidomain and Monodomain models, P. Colli Franzone, L. F. Pavarino, and B. Taccardi, Mathematical Biosciences, 197, 1, 35--66, 2005. BibTeX
Effects of transmural electrical heterogeneities and electrotonic interactions on the dispersion of cardiac repolarization and action potential duration: a simulation study, P. Colli Franzone, L. F. Pavarino, and B. Taccardi, Mathematical Biosciences, 204, 1, 132--165, 2006. BibTeX
MODELING ANISOTROPIC AND HETEROGENEOUS CARDIAC MODELS: PARALLEL SIMULATIONS, P. Colli-Franzone, L.F. Pavarino, and B. Taccardi, MEDICON and HEALTH TELEMATICS 2004, Health in the Information Society, X Mediterranean Conference on Medical and Biological Engineering, 2004. BibTeX
Parallel Solution of Cardiac Reaction-Diffusion Models, Luca F. Pavarino and Piero Colli Franzone, Proceedings of the 15th International Conference on Domain Decomposition Methods, 669--776, 2003. BibTeX
A fully implicit parallel algorithm for simulating the non-linear electrical activity of the heart, Maria Murillo and Xiao-Chuan Cai, Numerical Linear Algebra with Applications, 11, 261 - 277, 2004. BibTeX
TACC supercomputer performs laser cancer surgery on canine, In April, the Lonestar supercomputer at the Texas Advanced Computing Center in Austin performed laser surgery on a dog in Houston without the intervention of a surgeon. The treatment was developed collaboratively by computational experts from the Institute for Computational Engineering and Sciences (ICES) at UT-Austin, leading technologists from the M.D. Anderson Cancer Center in Houston, and cyberinfrastructure specialists and systems from TACC. Using precise lasers, state-of-the-art thermal imaging technology, and advanced computational methods, dynamic, data-driven treatments are being pursued as a minimally invasive alternative to the standard treatment of cancer.. BibTeX
Nanoshell-Mediated Laser Surgery Simulation for Prostate Cancer Treatment, Yusheng Feng, David Fuentes, Andrea Hawkins, Jon Bass, Marissa Nichole Rylander, Andrew Elliott, Anil Shetty, R. Jason Stafford, and J. Tinsley Oden, Engineering with Computers, Special issue on Computational Bioengineering, 2008. BibTeX
Computational Infrastructure for the Real-Time Patient-Specific Treatment of Cancer, K. R. Diller, J. T. Oden, C. Bajaj, J. C. Browne, J. Hazle, I. Babu����ska, J. Bass, L. Bidaut, L. Demkowicz, A. Elliott, Y. Feng, D. Fuentes, S. Goswami, A. Hawkins, S. Khoshnevis, B. Kwon, S. Prudhomme, and R. J. Stafford, University of Texas at Austin, 2008. BibTeX
Evaluation of the Adjoint Equation Based Algorithm for Elasticity Imaging, A.A. Oberai, N.H. Gokhale, M.M. Doyley, and J.C.Bamber, Physics in Medicine and Biology, 49, 2955--2947, 2004. BibTeX
A Dynamic Data Driven Grid System for Intra-Operative Image Guided Neurosurgery, A. Majumdar, A. Birnbaum, D. Choi, A. Trivedi, S. K. Warfield, K. Baldridge, and P. Krysl, ICCS 2005, V.S. Sunderam et al., 672--679, 2005. BibTeX
A parallel implementation of non-rigid registration using a volumetric biomechanical model, Sermesant, M., Clatz, O., Li, Z., Lanteri, S., Delingette, H., and Ayache, H., 2003. BibTeX
A Novel Nonrigid Registration Algorithm And Applications, J. Rexilius, S.K. Warfield, C.R.G. Guttmann, X. Wei, R. Benson, L. Wolfson, M. Shenton, H. Handels, and R. Kikinis, 2003. BibTeX
Capturing intraoperative deformations: research experience at Brigham and Women's hospital, Simon K. Warfield, Steven J. Haker, Ion-Florin Talos, Corey A. Kemper, Neil Weisenfeld, Andrea U.J. Mewes, Daniel Goldberg-Zimring, Kelly H. Zou, Carl-Fredrik Westin, William M. Wells, Clare M.C. Tempany, Alexandra Golby, Peter M. Black, Ferenc A. Jolesz, and Ron Kikinis, Medical Image Analysis, 2005. BibTeX
Real-Time Registration of Volumetic Brain MRI by Biomechanical Simulation of Deformation during Image Guided Neurosurgery, Simon K. Warfield, Florin Talos, Alida Tei, Arya Nabavi, Matthieu Ferrant, Peter McL. Black, Ferenc A. Jolesz, and Ron Kikinis, Computing and Visualization in Science, 2002. BibTeX
Registration of 3D Intraoperative MR Images of the Brain using a Finite Element Biomechanical Model, Matthieu Ferrant, Arya Nabavi, Benoit Macq, Ferenc A. Jolesz, Ron Kikinis, and Simon K. Warfield, IEEE Transactions on Medical Imaging, 2001. BibTeX
Real-Time Biomechanical Simulation of Volumetric Brain Deformation for Image Guided Neurosurgery, Simon K. Warfield, Matthieu Ferrant, Xavier Gallez, Arya Nabavi, Ferenc A. Jolesz, and Ron Kikinis, Proceedings of SC2000, 2000. BibTeX
Parallelized Bayesian inversion for three-dimensional dental X-ray imaging, V. Kolehmainen, A. Vanne, S. Siltanen, S. Jarvenpaa, J.P. Kaipio, M. Lassas, and M. Kalke, IEEE Transactions on Medical Imaging, 25, 2, 218--228, 2006. BibTeX
Performance enhancements to ELMFIRE gyrokinetic code leading to new ranges of application, F. Ogando, A. Signell, J.A. Heikkinen, M. Aspn��s, S. Henriksson, S.J. Janhunen, and T.P. Kiviniemi, 33rd EPS Conference on Plasma Phys., European fusion code, 2006. BibTeX
Intermediate nonlinear evolution of the Parker instability: Formation of convection-induced discontinuities and absence of finite-time singularities, P. Zhu, A. Bhattacharjee, and K. Germaschewski, Phys. Rev. Lett., 96, 065001, doi:10.1103/PhysRevLett.96.065001, 2006. BibTeX
Solution of Reduced Resistive Magnetohydrodynamics using Implicit Adaptive Mesh Refinement, B. Philip, M. Pernice, and L.Chacon, Proceedings of the 16th International Conference on Domain Decomposition methods, 2005. BibTeX
Solution of Equilibrium Radiation Diffusion Problems using Adaptive Mesh Refinement, M. Pernice and B. Philip, SIAM J. of Sci. Comput., 2005. BibTeX
The SEL macroscopic modeling code, A. H. Glasser and X. Z. Tang, Computer Physics Communications, 164, 237--243, 2004. BibTeX
A finite element mesh in a tokamak edge geometry, Y. Nishimura and Z.Lin, Contributions to Plasma Physics, 22, 2006. BibTeX
A finite element Poisson solver for gyrokinetic particle simulations in a global field aligned mesh, Y. Nishimura, Z.Lin, J.Lewandowski, and S.Ethier, J. Comput. Phys., 214, 657, 2006. BibTeX
Global gyrokinetic Particle-in-cell Simulations with Trapped Electrons, J.L.V Lewandowski, Y.Nishimura, W.W.Lee, Z.Lin, and S. Ethier, Sherwood Fusion Theory Conference, Missoula, MT, 2004. BibTeX
Electromagnetic gyrokinetic simulation with a fluid-kinetic hybrid electron model, Y. Nishimura, Z.Lin, L.Chen, J.Lewandowski, S.Ethier, and W. Wang, Sherwood Fusion Theory Conference, Missoula, MT, 2004. BibTeX
Numerical studies of a steady state axisymmetric co-axial helicity injection plasma, X. Z.~Tang and A.~H.~Boozer, Physics of Plasmas, 11, 171--185, 2004. BibTeX
Inclusion of electromagnetic effects into gyrokinetic particle simulations, Y. Nishimura, Z.Lin, L.Chen, and W. Wang, American Physical Society 45th Annual Meeting Division of Plasma Physics, Albuquerque, New Mexico, October 2003, 2003. BibTeX
Resistive Magnetohydrodynamics Simulation of Fusion Plasmas, X. Z. Tang, G. Y. Fu, S. C. Jardin, L. L. Lowe, W. Park, and H. R. Strauss, Princeton Plasma Physics Laboratory, PPPL-3532, Presented at 10th Society for Industrial and Applied Mathematics (SIAM) Conference on Parallel Processing for Scientific Computing, Portsmouth, Virginia, March 12-14, 2001., 2001. BibTeX
Magma dynamics with the Enthalpy Method: Benchmark solutions and magmatic focusing at mid-ocean ridges, Richard F. Katz, J. Petrology, 49, 2099--2121, 2008. BibTeX
On preconditioning for a parallel solution of the Richards equation, Michael Herbst, Swen Gottschalk, Martin Reissel, Horst Hardelauf, Roy Kasteel, Matthieu Javaux, Jan Vanderborght, and Harry Vereeckena, Computers and Geosciences, 34, 1958--1963, 2008. BibTeX
Preconditioned iterative methods for Stokes flow problems arising in computational geodynamics, Dave A. May and Louis Moresi, Physics of the Earth and Planetary Interiors, 171, 1-4, 33 - 47, Recent Advances in Computational Geodynamics: Theory, Numerics and Applications, 2008. BibTeX
Simulation of directional solidification, thermochemical convection, and chimney formation in a Hele-Shaw cell, R.F. Katz and M.G. Worster, J. Comp. Phys., 227, 9823-9840, 2008. BibTeX
Full waveform inversion for seismic velocity and anelastic losses in heterogeneous structures, A. Askan, V. Akcelik, J. Bielak, and O. Ghattas, Bulletin of Seismological Society of America, 97, 1990--2008, 2007. BibTeX
The dynamics of melt and shear localization in partially molten aggregates, Richard F. Katz, Marc Spiegelman, and Benjamin Holtzman, Nature, 442, 676--679, 2006. BibTeX
Parallel Preconditioning for Sedimentary Basin Simulations, Roland Masson, Philippe Quandalle, Stephane Requena, and Robert Scheichl, Large-Scale Scientific Computing: 4th International Conference, LSSC 2003, Sozopol, Bulgaria, June 4-8, 2003, 2003. BibTeX
PFLOTRAN: Massively Parallel 3-D Simulator for CO2 Sequestration in Geologic Media, Chuan Lu and Peter C. Lichtner, Fourth Annual Conference on Carbon Capture and Sequestration DOE/NETL, 2005. BibTeX
Decoupling and Block Preconditioning for Sedimentary Basin Simulations, R. Scheichl, R. Masson, and J. Wendebourg, Computational Geosciences, 7, 295--318, 2003. BibTeX
Versatile multilevel Schwarz preconditioners for multiphase flow, C. E. Kees, C.T. Miller, E.W. Jenkins, and C.T. Kelley, Computational Geosciences, 7, 91--114, 2003. BibTeX
Improving depth imaging by automated model updating, JN Buur and T Kuehnel, The Leading Edge, 22, 310-318, 2003. BibTeX
Mantle convection modeling with viscoelastic/brittle lithosphere: Numerical and computational methodology, B. Appelbe, D. May, S. Quenette, S. Tang, F. Wang, and L. Moresi, Lecture Notes in Computer Science, volume 2659, part of the ICCS Conference Proceedings, 2003. BibTeX
Parallelization of a 3D Seismic Migration Code with PETSc, Guillaume Dumont and Michel Kern, Proceedings of the Ninth SIAM Conference on Parallel Processing for Scientific Computing, 1999. BibTeX
The deep roots of volcanoes: models of magma dynamics with applications to subduction zones, R.F. Katz, 2005. BibTeX
Numerical Solution of Partial Differential Equations, Matthew G. Knepley, Richard~F. Katz, and Barry~F. Smith, 2004. BibTeX
Ridge migration, asthenospheric flow and the origin of magmatic segmentation in the global mid-ocean ridge system, Richard F. Katz, Marc Spiegelman, and S.M. Carbotte, Geophys.\ Res.\ Letts., 31, L15605, 2004. BibTeX
Numerical simulation of geodynamic processes with the Portable Extensible Toolkit for Scientific Computation, Richard F. Katz, Matthew G. Knepley, Barry Smith, Marc Spiegelman, and Ethan Coon, Phys. Earth Planet. In., 2007. BibTeX
Lithosphere tearing at STEP faults: response to edges of subduction zones, R. Govers and M.J.R. Wortel, Earth and Planetary Science Letters, 236/1-2, 505-523, 2005. BibTeX
Towards Rapid Geoscience Model Development - The Snark Project, B. Appelbe, D. May, S. Quenette, S. Tang, F. Wang, and L. Moresi, Proceedings of 3rd ACES (APEC Cooperation for Earthquake Simulation) Workshop, 2002. BibTeX
Snark - A Reusable Framwork for Geoscience Computational Models, Bill Appelbe, David May, Louis Moresi, Steve Quenette, Siew-Chiang Tan, and Feng Wang, Submitted to Pure and Applied Geosciences. BibTeX
High Resolution Forward and Inverse Earthquake Modeling on Terascale Computers, Volkan Akcelik, Jacobo Bielak, George Biros, Ioannis Epanomeritakis, Antonio Fernandez Omar Ghattas, Eui Joong Kim, David O'Hallaron, and Tiankai Tu, Proceedings of SC2003, A winner of the Gordon Bell Prize for special achievement at SC2003, 2003. BibTeX
A computational framework for simulation of biogeochemical tracers in the ocean, Khatiwala, S., Glob. Biogeochem. Cycles, 21, 2007. BibTeX
A finite-element Ocean Model: Principles and Evaluation, Sergey Danilov, Gennady Kivman and Jens Schroeter, Ocean Modelling, 6(2), 125-150, 2004. BibTeX
Evaluation of an eddy-permitting finite-element ocean model in the North Atlantic, S. Danilov, G. Kivman, and J. Schroter, Ocean Modelling, 2004. BibTeX
Data Assimilation with the Ensemble Kalman Filter and the SEIK Filter applied to a Finite Element Model of the North Atlantic, L. Nerger, S. Danilov, G. Kivman, W. Hiller, and J. Schroter, Journal of marine systems, 2004. BibTeX
GrossrAumige Zirkulationsstrukturen in einem nichtlinearen adaptiven AtmosphArenmodell, M. Lauter, Berichte zur Polar- und Meeresforschung, 2004. BibTeX
Unsteady analytical solutions of the spherical shallow water equations, M. Lauter, D. Handorf, and K. Dethloff, Journal of computational physics, 2004. BibTeX
GrossAumige Zirkulationsstrukturen in einem nichtlinearen adaptiven AtmosphArenmodell, M. Lauter, UniversitAt Potsdam, 134 P., UniversitAt Potsdam, 2004. BibTeX
FoSSI : The Family of Simplified Solver Interfaces for the rapid development of parallel numerical atmosphere and ocean models, S. Frickenhaus, W. Hiller, and M. Best, Ocean Modelling, 10, 185--191, 2005. BibTeX
A Newton-CG method for large-scale three-dimensional elastic full-waveform seismic inversion, I Epanomeritakis, V Ak\ccelik, O Ghattas, and J Bielak, Inverse Problems, 24, 3, 034015 (26pp), 2008. BibTeX
STOMP (Subsurface Transport Over Multiple Phases) webpage. BibTeX
Methods and Experiences For Parallelizing Flood Models, L. Hluchy, V.D. Tran, D.Froehlich, and W.Castaings, Recent Advances in Parallel Virtual Machine and Message Passing Interface: 10th European PVM/MPI User's Group Meeting, Springer Lecture Notes in Computer Science, Volume 2840, 2003. BibTeX
Flood Modeling System and Its Parallelization, L. Hluchy, V.D. Tran, J. Astalos, M. Dobrucky, G. T. Nguyen, and D.Froehlich, Proceedings of the International Conference on Parallel Computing in Electrical Engineering, 2002. BibTeX
High-Performance Simulation of Surface-Subsurface Coupled Flow and Reactive Transport at Watershed Scale, J. P. Gwo and G. T. Yeh, The International Conference on Computational Methods, 2004. BibTeX
The South Florida Regional Simulation Model and Hydrologic Simulation Engine, Simulates overland, groundwater and canal flows for south Florida. Uses PETSc for its linear solves. BibTeX
Dynamic data driven inversion for terascale simulations: real-time indentification of airborne contaminants, Volkan Ak\c celik, George Biros, Andrei Dr{\ua}g{\ua}nescu, Omar Ghattas, Judith C. Hill, and Gart~G. van Bloemen Waanders, Proceedings of SC2005, 2005. BibTeX
Comparison of Two Local Refinement Methods for Large Scale Air Pollution Simulations, Anton Antonov, Krassimir Georgiev, Emilia Komsalova, and Zahari Zlatev, Large-Scale Scientific Computing: 4th International Conference, LSSC 2003, 2003. BibTeX
Object-Oriented Framework for Large Scale Air Pollution Modeling, Anton Antonov, Large-Scale Scientific Computing : Third International Conference, LSSC 2001, Sozopol, Bulgaria, Springer Lecture Notes in Computer Science, Volume 2179, 2001. BibTeX
Mineralogical heterogeneity in fractured, porous media and its representation in reactive transport models, William E. Glassley, Ardyth M. Simmons, and James R. Kercher, Applied Geochemistry, 17, 699--708, 2000. BibTeX
The impact of climate change on vadose zone pore waters and its implication for long-term monitoring, William E. Glassley, John J. Nitao, Charles W. Grant, James W. Johnson, Carl I. Steefel, and James R. Kercher, Computers and Geosciences, 29, 399-411, 2003. BibTeX
Reactive transport modeling: An essential tool and a new research approach for the Earth sciences, Carl I. Steefel, Donald J. DePaolo, and Peter C. Lichtner, Earth and Planetary Science Letters, 2005. BibTeX
Numerical Modeling of NAPL Source Zone Treatment, Hammond, G.E., A.J. Valocchi and P.C. Lichtner, Poster at American Geophysical Union Fall 2002 Meeting, San Francisco, CA., 2002. BibTeX
Innovative Methods for Solving Multicomponent Biogeochemical Groundwater Transport on Supercomputers, Glenn E. Hammond, 2003. BibTeX
Parallel Least-Squares Finite Element Method for Large Eddy Simulation of Large Scale Environmental Flows and Transport Processes, EPA funded work to simulate turbulent dispersion of toxic chemicals around buildings and in Green Bay. Used PETSc for its linear solvers, 1999. BibTeX
Modeling Multicomponent Reactive Transport on Parallel Computers Using Jacobian-Free Newton Krylov with Operator-Split Preconditioners, Glenn E. Hammond, Albert J. Valocchi, and Peter C. Lichtner, Proceedings of the XIV International Conference on Computational Methods in Water Resources, Delft, The Netherlands., 2002. BibTeX
Software for modeling multicomponent, multidimensional reactive transport, C. I. Steefel, Lawrence Livermore National Laboratory, UCRL-MA-143182, 2001. BibTeX
A coupled model for transport of multiple chemical-species and kinetic precipitation dissolution reactions with application to reactive flow in single-phase hydrothermal systems, C. I. Steefel and A. C. Lasaga, Americal Journal of Science, 294, 5, 529-592, 1994. BibTeX
OS3D/GIMRT, Software for Multicomponent-Multidimensional reactive transport: User's manual and programmer's guide, C. I. Steefel and S. B. Yabusaki, Pacific Northwest National Laboratory, PNNL-11166, 1996. BibTeX
Application of Jacobian-free Newton-Krylov with physics-based preconditioning to biogeochemical transport, G. E. Hammond, A.J. Valocchi, and P.C. Lichtner, Advances in Water Resources, 28, 359--376, 2005. BibTeX
A Markov random field model of contamination source identification in porous media flow, J Wang and N Zabaras, Int. J. Heat and Mass Transfer, 2005. BibTeX
Lecture Notes in Computer Science, Jong G. Kim and Hyoung W. Park, 2004. BibTeX
Parallel Implementation of Finite Element Groundwater Flow Model, Kim, J. G. and Kim, J., AGU Spring Meeting Abstracts, 32-+, 2001. BibTeX
CASE STUDY: A MODEL TO SIMULATE REGIONAL FLOW IN SOUTH FLORIDA, A. M. Wasantha Lal, Randy Van Zee, and Mark Belnap, Journal of Hydraulic Engineering, 131, 4, 247--258, 2005. BibTeX
A parallel RMA2 model for simulating large-scale free surface flows, Prasada Rao, Environmental Modelling and Software, 47--53, 2005. BibTeX
An Efficient Scalable Finite Element Model for Simulating Large Scale Hydrodynamic Flows, Prasada Rao, Proceedings of the American Society of Civil Engineers 16th Engineering Mechanics Conference, 2003. BibTeX
Modeling Thermal-Hydrological-Chemical (THC) Coupled Processes with Applications to Underground Nuclear Tests at the Nevada Test Site; A Grand Challenge Supercomputing Problem, Peter C. Lichtner and Andrew Wolfsberg, MPU Workshop: Conceptual Model Development for Subsurface Reactive Transport Modeling of Inorganic Contaminants, Radionuclides and Nutrients, Also Los Alamos National Laboratory report: LA-UR-04-1826, 2004. BibTeX
Parallel Compositional Reservior Simulation on Clusters of PCs, Jason Abate, Peng Wang, and Kamy Sepehrnoori, Int. J. High Performance Computing Applications, 15, 1, 13--21, 2001. BibTeX
Preconditioned Newton Methods for Simulation of Reservoirs with Surface Facilities, Thomas James Byer, 2000. BibTeX
Experience with Parallel Computing for Reservoir and Geomechanics Simulation on a Win32 Cluster, Peter J. Puchyr, Proceedings of the Canadian International Petroleum Conference, Paper number CIPC2006-207, 2006. BibTeX
A Fully Implicit Parallel EOS Compositional Simulator for Large Scale Reservoir Simulation, P. Wang, S. Balay, K. Seperhrnoori, J. Wheeler, J. Abate, B. Smith, and G. A. Pope, Proceedings of the 1999 Society of Petroleum Engineers 15th Reservoir Simulation Symposium, also available as Argonne preprint ANL/MCS-P743-1298, 1998. BibTeX
Variational Space-time (Dis)continuous Galerkin Method for Linear Free Surface Waves, V.R. Ambati, J.J.W. van der Vegt, and O. Bokhove, University of Twente, the Netherlands, 2008. BibTeX
Towards Numerical Simulation of Flapping Foils on Fixed Cartesian Grids, M. Bozkurttas, H. Dong, V. Seshadri, and R. Mittal, 43rd AIAA Aerospace Sciences Meeting and Exhibit, 2005. BibTeX
A MULTILEVEL FINITE VOLUME METHOD WITH MULTISCALE-BASED GRID ADAPTATION FOR STEADY COMPRESSIBLE FLOWS, S. Muller and Y. Stiriba, European Conference on Computational Fluid Dynamics: ECCOMAS CFD 2006, 2006. BibTeX
Parallel three-dimensional simulation of the injection molding process, B. J. Araújo, J. C. F. Teixeira, A. M. Cunha, and C. P. T. Groth, International Journal for Numerical Methods in Fluids, 2008. BibTeX
a parallel coupled algorithm for collocated grids and its application to Large Eddy Simulation of a turbulent wake, A. Cubero, 2008. BibTeX
A Compact Momentum Interpolation Method for unsteady flows and relaxation, A. Cubero and N. Fueyo, Numerical Heat Transfer, part B-Fundamentals, 56, 6, 507--529, 2007. BibTeX
Preconditioning based on a partially implicit implementation of Momentum Interpolation for coupled solvers, A. Cubero and N. Fueyo, Fluid Mechanics Group of the University of Zaragoza (Spain), 2007. BibTeX
Robust Mesh Deformation using the Linear Elasticity Equations, Richard Dwight, Computational Fluid Dynamics 2006, H. Deconinck and E. Dick, 2006. BibTeX
Effect of Various Approximations of the Discrete Adjoint on Gradient-Based Optimization, Richard Dwight and Joel Brezillon, Proceedings of the 44th AIAA Aerospace Sciences Meeting and Exhibit, Reno NV. AIAA-2006-0690, 2006. BibTeX
Efficiency Improvements of RANS-Based Analysis and Optimization using Implicit and Adjoint Methods on Unstructured Grids, Richard Dwight, 2006. BibTeX
An adaptive Lagrange-Galerkin shallow-water model on the sphere, M. Lauter, D. Handorf, K. Dethloff, S. Frickenhaus, N. Rakowsky, and W. Hiller, Workshop Proceedings Current Development in Shallow Water Models on the Sphere March, 10-14, 2003, Munich University of Technology, German, 2003. BibTeX
The Embedded Boundary Integral Method (EBI) for the Incompressible Navier-Stokes equations, George Biros, Lexing Ying, and Denis Zorin, IABEM 2002, International Association for Boundary Element Methods, UT Austin, 2002. BibTeX
Benchmarking of a 3D, unstructured, finite volume code for incompressible Navier-Stokes equation on a cluster of distributed-memory computers, S.A. Mohsen Karimian and Anthony G. Straatman, Proceedings of the 19th International Symposium on High Performance Computing Systems and Applications, 11--16, 2005. BibTeX
Multidimensional Residual Distribution Schemes for the Pseudo-Compressible Euler and Navier-Stokes equations on Unstructured Meshes, A. Bonglioli, Universita della Basilicata via della Tecnica 3, 1996. BibTeX
A new fully coupled method for computing turbulent flows, G. B. Deng, J. Piquet, X. Vasseur, and M. Visonneau", Computers and Fluids, 30, 445--472, 2001. BibTeX
Fast Elliptic Solver for Incompressible Navier Stokes Flow and Heat Transfer Problems on the Grid, M. Garbey, B. Hadri, and W. Shyy., Aerospace Sciences Meeting and Exhibit, Paper No. 2005-1386, 2005. BibTeX
A Multidimensional Two-Phase Flow Model for the Total Dissolved Gas Downstream of Spillways, M. S. Politano, P. M. Carrica, C. Turan, and L. Weber, Journal of Hydraulic Research, accepted for publication, 2004. BibTeX
Unsteady RANS Method for Ship Motions with Application to Roll for a Surface Combatant, R. V. Wilson, P. M. Carrica, and F. Stern, Computers and Fluids, in press, 2004. BibTeX
Unsteady RANS Simulation of the Ship Forward Speed Diffraction Problem, P. M. Carrica, R. V. Wilson, and F. Stern, Computers and Fluids, accepted for publication, 2005. BibTeX
Toward Large-Scale Computations of Ship Motions with Dynamic Overset Curvilinear Grids, P. M. Carrica, J. Huang, R. Noack, D. Kaushik, B. Smith, and F. Stern, Proceedings of the 27th Symposium on Naval Hydrodynamics, Seoul, Korea, 2008. BibTeX
Application of Algebraic Multigrid Methods to the Solution of Stratified Flows About Submerged Bodies, M. T. Jozkowski, 2005. BibTeX
Detached-Eddy Simulation of High Reynolds Number Beveled-Trailing-Edge Flows and Wakes, E. G. Paterson and L. J. Peltier, ASME Journal of Fluids Engineering, In press, 2005. BibTeX
Computational Study of the Wake and Contaminant Transport of a Walking Human, B. A. Edge, E. G. Paterson, and G. Settles, ASME Journal of Fluids Engineering, In press, 2005. BibTeX
Computation of Maneuvering Coefficients for Non-Body-of-Revolution Submarines Using Unsteady RANS CFD, B. Racine and E. G. Paterson, 35th AIAA Fluid Dynamics Conference and Exhibit, 2005. BibTeX
Prediction of Forces and Moments on a Sonobuoy Configuration Using Overset Grids and DES, B. A. Edge, M. F. Trujillo, E. G. Paterson, and L. J. Peltier, 7th Overset Composite Grid and Solution Technology Symposium, 2004. BibTeX
Localized turbulence simulation for naval hydrodynamics: issues in using overset refinement grids and detached-eddy simulation, E. G. Paterson and L. J. Peltier, 7th Overset Composite Grid and Solution Technology Symposium, 2004. BibTeX
Experimental and Computational Study of Cavitation Inception on Co-Flow Nozzles, R. Meyer, F. J. Zajackowski, and W. A. Straka,and E. G. Paterson, 25th Symposium on Naval Hydrodynamics, 2004. BibTeX
A Physics-Based Simulation Methodology for Predicting Trailing-Edge Singing, E. G. Paterson, J. E. Poremba, L. J. Peltier, and S. A. Hambric, 25th Symposium on Naval Hydrodynamics, 2004. BibTeX
Detached-Eddy Simulation of High Reynolds Number Trailing-Edge Flows and Wakes, E. G. Paterson and L. J. Peltier, Symposium on LES Advancements and Applications, ASME FED Summer Meeting, 2004. BibTeX
Simulation of Steady Circulation Control for the General Aviation Circulation Control Wing, W. J. Baker, E. G., and Paterson, NASA/ONR Workshop on Circulation Control, 2004. BibTeX
RANS and Detached-Eddy Simulation of the NCCR airfoil, E. G. Paterson and W. J. Baker, NASA/ONR Workshop on Circulation Control, 2004. BibTeX
Simulation of Steady and Pulsed Circulation Controlfor Marine-Vehicle Control Surfaces, E. G. Paterson and W. J. Baker, 42nd AIAA Aerospace Sciences Meeting, 2004. BibTeX
CFD Modelling of the Flow Around the Ahmed Vehicle Model, G. Frank and J. D'Elia, Proceedings of the 2nd Conference on Advances and Applications of GiD, 2004. BibTeX
Science and Supercomputing at CINECA, A.Bonfiglioli, 2001. BibTeX
Computing high-Reynolds number vortical flows: a highly accurate method with a fully meshless formulation, L. A. Barba, International Conference on Parallel CFD, Grand Canary, May 2004, Submitted, 2004. BibTeX
Computation of Viscous Vortices with Fully Meshless Method, L. A. Barba and A. Leonard, Proceedings of ICTAM meeting in Warsaw, August 2004, Submitted, 2004. BibTeX
Experimental Validation of 3-D Lagrangian VOF Model: Bubble Shape and Rise Velocity, B. G. M. Van Wachem and J. C. Schouten, AIChE, 12, 2002. BibTeX
Precondizionatori paralleli per la fluidodinamica computazionale, P. Leggiero, A. Bonfiglioli, P. Amodio, and F. Mazzi, Dipartimento Interuniversitario di Matematica Universiti degli Studi-Politecnico di Bari Italy, 25/02, 2002. BibTeX
Higher Order Time Integration Methods for Two-Phase Flow, C. E. Kees and C. T. Miller, Advances in Water Resources, 25, 2, 159-177., 2002. BibTeX
Multilevel Parallel High Order Schemes for Invisid Flow Computations on 3D Unstructured Meshes, I. Lepot, F. Meers, and J.A. Essers, ECCOMAS Computational Fluid Dynamics Conference 2001, 2001. BibTeX
Parallel Building Blocks for Finite Element Simulations: Application to Solid-Liquid Mixture Flows, Matthew Knepley and Denis Vanderstraeten, Proceedings of Parallel CFD'97, 281--287, 1998. BibTeX
Parallel Implicit PDE Computations: Algorithms and Software, William D. Gropp, David E. Keyes, Lois Curfman McInnes, and M. D. Tidriri, Proceedings of Parallel CFD'97, 333-344, 1998. BibTeX
Lecture Notes in Computer Science 1457, Matthew Knepley, Ahmed H. Sameh, and Vivek Sarin, 1998. BibTeX
Globalized Newton-Krylov-Schwarz Algorithms and Software for Parallel Implicit CFD, William D. Gropp, David E. Keyes, Lois Curfman McInnes, and M. D. Tidriri, Int. J. High Performance Computing Applications, 14, 102-136, 2000. BibTeX
Achieving High Sustained Performance in an Unstructured Mesh CFD Application, W. K. Anderson, W. D. Gropp, D. K. Kaushik, D. E. Keyes, and B. F. Smith, Proceedings of SC 99, Winner of Gordon Bell Special Prize at SC1999, 1999. BibTeX
High Performance Parallel Implicit CFD, W. D. Gropp, D. K. Kaushik, D. E. Keyes, and B. F. Smith, Journal of Parallel Computing, 27, 337-362, 2001. BibTeX
Finite Difference lattice Boltzmann model for Liquid Vapour Systems, Artur Cristea and Victor Sofonea, Proceedings of the Romanian Academy, Series A: Mathematics, Physics, Technical Sciences, Information Sciences, 3, 3, 2002. BibTeX
Two component lattice Boltzmann model with flux limiter techniques, Artur Cristea and Victor Sofonea, Proceedings of the Romanian Academy, Series A: Mathematics, Physics, Technical Sciences, Information Sciences, 4, 1, 59--64, 2003. BibTeX
Two component lattice Boltzmann model with flux limiters, Artur Cristea and Victor Sofonea, Central European Journal of Physics, 2, 2, 382--396, 2004. BibTeX
Finite-difference lattice Boltzmann model with flux limiters for liquid-vapor systems, Victor Sofonea, Antonio Lamura, Giuseppe Gonnella, and Artur Cristea, Physical Review E, 70, 4, 046702-1 / 046702-9, 2004. BibTeX
Latency, Bandwidth, and Concurrent Issue Limitations in High-Performance CFD, W. D. Gropp, D. K. Kaushik, D. E. Keyes, and B. F. Smith, Proceedings of the First MIT Conference on Computational Fluid and Solid Mechanics, 2001. BibTeX
Understanding the Parallel Scalability of An Implicit Unstructured Mesh CFD Code, W. D. Gropp, D. K. Kaushik, D. E. Keyes, and B. F. Smith, Proceedings of the 7th International Conference on High Performance Computing (HiPC '2000), 395--404, 2000. BibTeX
Performance Modeling and Tuning of an Unstructured Mesh CFD Application, W. D. Gropp, D. K. Kaushik, D. E. Keyes, and B. F. Smith, Proceedings of SC2000, 2000. BibTeX
Design of Large Scale Parallel Simulations, Matthew Knepley, Ahmed H. Sameh, and Vivek Sarin, Proceedings of Parallel CFD'99, A. Ecer et al., 1999. BibTeX
Towards Realistic Performance Bounds for Implicit CFD codes, W. D. Gropp, D. K. Kaushik, D. E. Keyes, and B. F. Smith, Proceedings of Parallel CFD'99, A. Ecer et al., 1999. BibTeX
On the Interaction of Architecture and Algorithm in the Domain-Based Parallelization of an Unstructured Grid Incompressible Flow Code, D. K. Kaushik, D. E. Keyes, and B. F. Smith, Proceedings of the 10th International Conference on Domain Decomposition Methods, J. Mandel et al., 311--319, 1997. BibTeX
Newton-Krylov-Schwarz Methods for Aerodynamic Problems: Compressible and Incompressible Flows on Unstructured Grids, D. K. Kaushik, D. E. Keyes, and B. F. Smith, Proceedings of the 11th International Conference on Domain Decomposition Methods, C.-H. Lai et al., 1999. BibTeX
Perspectives for CFD on Petaflops Systems, D. E. Keyes, D. K. Kaushik, and B. F. Smith, CFD Review 1998, M. Hafez and K. Oshima, 1079--1096, 1998. BibTeX
Parallel Simulation of Compressible Flow Using Automatic Differentiation and PETSc, P. D. Hovland and L. C. McInnes, Parallel Computing, special issue of Parallel Computing on ``Parallel Computing in Aerospace'', 2000. BibTeX
Fast Multipole Method for particle interactions: an open source parallel library component, Felipe A. Cruz, Lorena A. Barba, and Matthew G. Knepley, Proceedings of ParCFD2008, Tromeur-Dervout et. al., 2008. BibTeX
A parallel nonlinear additive Schwarz preconditioned inexact Newton algorithm for incompressible Navier-Stokes equations, F.-N. Hwang and X.-C. Cai, J. Comput. Phys., 204, 666--691, 2005. BibTeX
A parallel computing approach for solving the Helmholtz equation in 3D domains: Application to the study of acoustic behaviour of silencers, J.M., Alonso, G. Garcia, V. Hernandez, F.D. Denia, and F.J. Fuenmayor, Eurppean Congress on Computational Methods in Applied Sciences and Engineering (ECCOMAS), 2004. BibTeX
Comparison of Quasi Minimal Residual and Bi-Conjugate Gradient Iterative Methods to Solve Complex Symmetric Systems Arising from Time-Harmonic Simulations, H. De Gersem, Domenico Lahaye, S. Vandewalle, and K. Hameyer, COMPEL, 18, 3, 298--310, 1999. BibTeX
Schwarz Methods for Helmholtz's Equation, Olof B. Widlund, Mathematical and Numerical Aspects of Wave Propagation, John A. DeSanto, 620--622, Proceedings of the Fourth International Conference on Mathematical and Numerical Aspects of Wave Propagation, Golden, Colorado, June 1--5, 1998. BibTeX
Overlapping Schwarz Methods for Maxwell's Equations in Conductive Media, Andrea Toselli, Mathematical and Numerical Aspects of Wave Propagation, John A. DeSanto, 540--542, Proceedings of the Fourth International Conference on Mathematical and Numerical Aspects of Wave Propagation, Golden, Colorado, June 1--5, 1998. BibTeX
Parallel Solution of Helmholtz Problems using Additive Schwarz Methods, L. C. McInnes, R. Susan-Resiga, H. M. Atassi, and D. E. Keyes, Mathematical and Numerical Aspects of Wave Propagation, John A. DeSanto, 623--625, Proceedings of the Fourth International Conference on Mathematical and Numerical Aspects of Wave Propagation, Golden, Colorado, June 1--5, 1998. BibTeX
Additive Schwarz Methods with Nonreflecting Boundary Conditions for the Parallel Computation of Helmholtz Problems, L. C. McInnes, R. Susan-Resiga, D. E. Keyes, and H. M. Atassi, Proceedings of the 10th Intl. Conf. on Domain Decomposition Methods, J. Mandel et al., 349--357, 1998. BibTeX
Overlapping Schwarz Algorithms for Solving Helmholtz's Equation, X.-C. Cai, M. A. Casarin, Jr., F. W. Elliott, Jr., and O. B. Widlund, Proceedings of the 10th Intl. Conf. on Domain Decomposition Methods, J. Mandel et al., 437-445, 1998. BibTeX
Parallel Computing Using Schwarz Domain Decomposition Method for Aeroacoustic Problems, R. Susan-Resiga and H. M. Atassi, Proceedings of the 4th AIAA/CEAS Aeroacoustics Conference, 86-96, AIAA paper 98-2218, 1998. BibTeX
Parallel Computation of Harmonic Waves using Domain Decomposition, Part I: General Formulation, H. M. Atassi and R. Susan-Resiga, Proceedings of the ASME Noise Control and Acoustics Division, 375-379, NCA-25, 1998. BibTeX
Parallel Computation of Harmonic Waves using Domain Decomposition, Part II: Numerical Implementation and Applications, R. Susan-Resiga and H. M. Atassi, Proceedings of the ASME Noise Control and Acoustics Division, 381 -388, NCA-25, 1998. BibTeX
Overlapping Schwarz methods for solving Helmholtz's Equation, Xiao-Chuan Cai, Mario A. Casarin, Frank W. Elliott, Jr., and Olof B. Widlund, Domain Decomposition Methods 10, 437--445, 1998. BibTeX
Parallel Fully Coupled Lagrange-Newton-Krylov-Schwarz Algorithmsand Software for Optimization Problems Constrained by Partial Differential Equations, Ernesto Prudencio, 2005. BibTeX
Parallel multilevel restricted Schwarz preconditioners with pollution removing for PDE-constrained optimization, Ernesto Prudencio and X. C. Cai, SIAM J. Sci. Comp., Submitted with revisions. BibTeX
Parallel full space SQP Lagrange-Newton-Krylov-Schwarz algorithms for PDE-constrained Optimization Problems, Ernesto Prudencio, R. Byrd, and X. C. Cai, SIAM J. Sci. Comp., 27, 1305--1328, 2006. BibTeX
Domain decomposition methods for PDE-constrained optimization problems, Ernesto Prudencio, R. Byrd, and X. C. Cai, VECPAR 2004, M. Dayde, J. Dongarra, V. Hernandex, and J. Palma, 569--582, 2004. BibTeX
Three-dimensional anisotropic mesh adaptation for phase change problems, Youssef Belhamadia, Andre Fortin, and Eric Chamberland, Journal of Computational Physics, 201, 753-770, 2004. BibTeX
A Lagrange-Newton-Krylov-Schur Method for PDE Constrained Optimization, George Biros and Omar Ghattas, SIAG-Opt Views and News, 11, 2, 2000. BibTeX
GPCG: A case study in the performance and scalability of optimization algorithms, Steve Benson, Lois Curfman McInnes, and Jorge Moré, Mathematics and Computer Science Division, Argonne National Laboratory, ANL/MCS-P768-0799, 1999. BibTeX
Parallel preconditioners for KKT systems arising in optimal control of viscous incompressible flows, George Biros and Omar Ghattas, Proceedings of Parallel CFD '99, Williamsburg, Virginia, USA, May 23-26, 1999, 1999. BibTeX
Using Automatic Differentiation for Second-order Matrix-free Methods in PDE-constrained Optimization, P. D. Hovland, D. E. Keyes, L. C. McInnes, and W. Samyono, Automatic Differentiation of Algorithms: From Simulation to Optimization, George Corliss, Christèle Faure, Andreas Griewank, Laurent Hascoët, and Uwe Naumann, 2002. BibTeX
Parallel Lagrange-Newton-Krylov-Schur Methods for PDE-Constrained Optimization. Part I: The Krylov-Schur Solver, George Biros and Omar Ghattas, Laboratory for Mechanics, Algorithms, and Computing, Carnegie Mellon University, 2001. BibTeX
Parallel Lagrange-Newton-Krylov-Schur Methods for PDE-Constrained Optimization. Part II: The Lagrange-Newton Solver, and its Application to Optimal Control of Steady Viscous Flows, George Biros and Omar Ghattas, Laboratory for Mechanics, Algorithms, and Computing, Carnegie Mellon University, 2001. BibTeX
PARALLEL FINITE ELEMENT METHOD FOR COUPLED CHLORIDE MOISTURE DIFFUSION IN CONCRETE, SUWITO AND XIAO-CHUAN CAI AND YUNPING XI, INTERNATIONAL JOURNAL OF NUMERICAL ANALYSIS AND MODELING, 3, 4, 2006. BibTeX
High Performance Simulations of Electrokinetic Flow and Transport in Microfluidic Chips, Pablo A. Klera, Lisandro D. Dalcin, Fabio A. Guarnieria, and Mario A. Stortia, 2008. BibTeX
Parallel Finite Element Computations for Soil-Foundation-Structure Interaction Problems Report, Boris Jeremic and Guanzhou Jie, UCD CompGeoMech 02--2007, 2007. BibTeX
Fast 3D frequency-dependent Radiative Transfer for Magneto-Hydrodynamics, Rolf Kuiper, Max-Planck-Institute for Astronomy, 2008. BibTeX
Fast reactor core simulations using the UNIC code, M. A. Smith, C. Rabiti, D. Kaushik, B. Smith, W. S. Yang, and G. Palmiotti, Proceedings of the International Conference on the Physics of Reactors ����Nuclear Power: A Sustainable Resource����, 2008. BibTeX
UN��C: Ultimate Neutronic Investigation Code, G. Palmiotti, M. A. Smith, C. Rabiti, M. Leclere, D. Kaushik, A. Siegel, B. Smith, and E. E. Lewis, Joint International Topical Meeting on Mathematics and Computation and Supercomputing in Nuclear Applications, 2007. BibTeX
PNFE Component of the UNIC Code, M. A. Smith, G. Palmiotti, C. Rabiti, D. Kaushik, A. Siegel, B. Smith, and E. E. Lewis, Joint International Topical Meeting on Mathematics and Computation and Supercomputing in Nuclear Applications, 2007. BibTeX
Object-oriented programming for fast-and-easy development of parallel applications in forming processes simulation, H. Digonnet and T. Coupez, Proceedings of the Second MIT Conference on Computational Fluid and Solid Mechanics, 2003. BibTeX
Calcul parallele en mise en forme des materiaux, H. Digonnet and T. Coupez, XVIeme Congres Francais de Mecanique, 2003. BibTeX
Parallel computation for solving efficiently viscoelastic fluid flow problems, H. Digonnet, L. Silva, and T. Coupez, Proceedings of ECCOMAS 2004, 2004. BibTeX
Parallel computation applied to 3D FE simulation of polymer injection molding, H. Digonnet, L. Silva, and T. Coupez, Proceedings of WCCM VI, 2004. BibTeX
Calcul parallele appliqu aux coulements de fluides complexe, H. Digonnet, O. Basset, T. Coupez, and L. Silva, Proceedings of Eme Congres Francais de Mecanique, 2005. BibTeX
SIPs: Shift-and-Invert Parallel Spectral Transformations, H. Zhang, B. Smith, M. Sternberg, and and P. Zapol, TOMS, 2, 2007. BibTeX
The detachment of a viscous drop in a viscous solution in the presence of a soluble surfactant, Fang Jin, Nivedita R. Gupta, and Kathleen J. Stebe, Phys. Fluids, 18, 2006. BibTeX
Phase Field Simulations of Liquid-Liquid Demixing During Immersion Precipitation of Polymeric Membranes in 2D and 3D, Bo Zhou and Adam Powell, J. Membrane Sci., 268, 2, 150--164, 2006. BibTeX
Flame Acceleration Distance in Obstacle-Laden Tubes, Anke Veser, Wolfgang Breitung, Sergey Dorofeev, and Alexander Efimenko, Proceedings of the NINTH INTERNATIONAL CONFERENCE ON NUMERICAL COMBUSTION, 2002. BibTeX
Discrete Willmore Flow, Alexander I. Bobenko and Peter Schrader, Eurographics Symposium on Geometry Processing, M. Desbrun and H. Pottmann, 2005. BibTeX
A numerical method for inverse design based on the inverse Euler equations, A. Scascighini, A. Troxler, and R. Jeltsch, International Journal for Numerical Methods in Fluids, 41, 339--355, 2003. BibTeX
A Numerical Method for the Design of Internal Flow Configurations Based on the Inverse Euler Equations, ANDREA SCASCIGHINI, 2001. BibTeX
A fast, higher-order solver for scattering by penetrable bodies in three dimensions, E. McKay Hyde and Oscar P. Bruno, Journal of Computational Physics, 202, 236--261, 2005. BibTeX
PARALLEL SOLUTION OF HIGH ORDER FINITE DIFFERENCE SCHEMES FOR PRICING MULTI-DIMENSIONAL AMERICAN OPTIONS, Matthew F Dixon, 2002. BibTeX
Fast Parallel PageRank: A Linear System Approach, David Gleich, Leonid Zhukov, and Pavel Berkhin, Stanford University, 2004. BibTeX
A DIAL-AN-OPERATOR APPROACH TO SIMULATION OF IMPURITY DIFFUSION IN SEMICONDUCTORS, Daniel W. Yergeau, 1999. BibTeX
KULL: LLNL's ASCI Inertial Confinement Fusion Simulation Code, J.A. Rathkopf, D.S. Miller, J.M. Owen, L.M. Stuart, M.R. Zika, P.G. Eltgroth, N.K. Madsen, K.P. McCandless, P.F. Nowak, M.K. Nemanic, N.A. Gentile, N.D. Keen, and T.S. Palmer, Physor 2000 American Nuclear Society Topical Meeting on Advances in Reactor Physics and Mathematics and Computation into the Next Millennium, 2000. BibTeX
An Implicit Fluctuation Splitting Scheme for Turbomachinery Flows, A. Bonfiglioli, P. De Palma, G. Pascazio, and M. Napolitano, Journal of Turbomachinery, 127, 395-401, 2005. BibTeX
High Performance Algorithms for Scalable Spin-Qubit Circuits with Quantum Dots, John Fettig, Nahil Sobh, Dmitriy V. Melnikov, and Jean-Pierre Leburton, Proceedings of the 5th International Conference on Linux Clusters, 2005. BibTeX
Spin configurations in circular and rectangular vertical quantum dots in a magnetic field: Three-dimensional self-consistent simulation, Dmitriy V. Melnikov, Philippe Matagne, Jean-Pierre Leburton, D.G. Austing, G. Yu, S. Tarucha, John Fettig, and Nahil Sobh, Arxiv preprint cond-mat/0506585, 2005. BibTeX
PARALLEL THERMAL RADIATION TRANSPORT IN TWO DIMENSIONS, Richard P. Smedley-Stevenson, 18th International Conference on Transport Theory (18 ICTT), 2003. BibTeX
Comparison Between Non-Equilibrium Green's Function and Monte Carlo Simulations for Transport in a Silicon Quantum Wire Structure, D. Guan, A. Godoy, U. Ravaioli, and F. Gamiz, Journal of Computational Electronics, 2, 335--339, 2003. BibTeX
One-level Newton-Krylov-Schwarz algorithm for unsteady nonlinear radiation diffusion problem, S. Ovtchinnikov and X.-C. Cai, Numer. Lin. Alg. Applics, 11, 867--881, 2004. BibTeX
Floating Solids: Combining Phase Field and Fluid-Structure Interactions, Adam Powell and David Dussault, Appl. Numer. Anal. Comp. Math., 2, 1, 157--166 , 2005. BibTeX
Accuracy analysis of the thrust force in 2D-3D finite element models, G. Deliége, F. Henrotte, and K. Hameyer, International Journal for Computation and Mathematics in Electrical and Electronic Engineering (COMPEL), 2005. BibTeX
Finite element modelling of ion convection by electrostatic forces, G. Deliége, F. Henrotte, W. Deprez, and K. Hameyer, IEE Proceedings Science, Measurement and Technology, 151, 6, 2004. BibTeX
Algebraic multigrid techniques for strongly indefinite linear systems from direct frequency response analysis in solid mechanics, Mark F. Adams, Computional Mechanics, 2005. BibTeX
Computational Modeling of Ion Beam-Neutralizer Interactions in Two and Three Dimensions, A. Wheelock and D. Cooke, 40th AIAA/ASME/SAE/ASEE Joint Propulsion Conference and Exhibit, 2004. BibTeX
Parallelizing Pre-rendering Computations on a Net Juggler PC Cluster, Jeremie Allard, Valerie Gouranton, Emmanuel Melin, and Bruno Raffin, Immersive Projection Technology Symposium, 2002. BibTeX
Hybrid and concurrent algorithms for nonlinear magnetic field problems, D Ioan, G Ciuprina, and C Ciobotaru, IEEE Transactions on Magnetics, 2000. BibTeX
Development and Performance Analysis of a Parallel Finite Element Application Implemented in an Object-Oriented Programming Framework, Brian J. Henz and Dale R. Shires, PDPTA 2003, 1286-1292, Resin Transfer Modeling, 2003. BibTeX
Least-Squares Finite Element Methods for Electromagnetic Applications, Rickard Bergstrom, Chalmers, 2000-05, 2000. BibTeX
A Moving Overset Grid Method for Interface Dynamics Applied to Non-Newtonian Hele Shaw Flow, Petri Fast and Michael J. Shelley, Journal of Computational Physics, 195, 117-142, 2004. BibTeX
Efficient Training of Conditional Random Fields, Hanna Wallach, 2002. BibTeX
Stability of explicit-implicit hybrid time-stepping schemes for Maxwells equations, T Rylander and A Bondeson, Journal of Computational Physics, 179, 426-438, 2002. BibTeX
Comparison of two implementations of AMG-preconditioned CG considering an electrostatic problem, Uwe Fabricius, Friedrich Alexander Universitat Erlangen Nurnberg Germany, 04-1, 2004. BibTeX
Lecture Notes in Computer Science, Natalia Seoane and A.J.Garca-Loureiro, 2004. BibTeX
Modulized Coupled Simulation of Localized Pit Initiation in Stainless Steel, Yuan He, Joshua Gray, Richard Braatz, and Richard Alkire, American Institute of Chemical Engineers 2004 Annual Meeting, 2004. BibTeX
Algorithms and Computing Architectures for Solving Differential-Algebraic Equation Systems Typically Encountered in Models of Corrosion Pit Initiation, J. Gray, and C. Homescu, L. Petzold, and Richard Alkire, Abstracts of the Electrochemical Society 204th meeting, 2003. BibTeX
A multiscale modeling approach to crack initiation in metallic polycrystals, Erin Lesulauro, Anthony R. Ingraffea, Gerd Heber, and Paul A. Wawrzynek, 44th AIAA/ASME/ASCE/AHS/ASC Structures, Structural Dynamics, and Materials Conference, 2003. BibTeX
Fracture Mechanics on the Intel Itanium Architecture, Gerd Heber, Andrew J. Dolgert, Maxirn Alt, Karen A. Mazurkiewicz, and Lynd Stringer, Intel Corporation, 2001. BibTeX
Modeling of 3D Metallic Polycrystals and Simulation of Crack Initiation, E. Iesulauro, G. Heber, P. A. Wawrzynek, and A. R. Ingraffea, International Conference ON Computational Engineering and Sciences, 2002. BibTeX
Parallel FEM Simulation of Crack Propagation, Bruce Carter, Chuin-Shan Chen, L. Paul Chew, Nikos Chrisochoides, Guang R. Gao, Gerd Heber, Antony R. Ingraffea, Roland Krause, Chris Myers, Demian Nave, Keshav Pingali, Paul Stodghill, Stephen Vavasis, and Paul A. Wawrzynek, Proceedings of Irregular 2000, 2000. BibTeX
Use of Polycrystal Plasticity Theory in Assessing Material Performance, A. J. Beaudoin, Simulation of materials processing: Theory, methods, and applications - Proceedings of the Sixth International Conference, NUMIFORM'98, J. Huétink and F. P. T. Baaijens, 1998. BibTeX
RF3P-A New Parallel Driven Frequency Electromagnetic Solver, JF DeFord and BL Held, Simulation Technology and Applied Research, Inc, Discusses their parallel commercial solver that uses PETSc, 2002. BibTeX
Modelling and Finite Element Simulation of Non-Linear and Anisotropic Quasi-Static Electromagnetic Systems, Hans Vande Sande, 2003. BibTeX
Reducing the Computation Time of Non-Linear Problems by an Adaptive Linear System Tolerance, H. Vande Sande, W. Deprez, J. De Coster, F. Henrotte, and K. Hameyer, IEEE Transactions on Magnetics, 40, 1306--1309, 2004. BibTeX
Optimal constraint projection for hyperbolic evolution systems, Michael Holst, Lee Lindblom, Robert Owen, Harald P. Pfeiffer, Mark A. Scheel, and Lawrence E. Kidder, Phys. Rev. D, 70, 084017, 2004. BibTeX
Extended Lifetime in Computational Evolution of Isolated Black Holes, Matthew Anderson and Richard A. Matzner, Foundations of Physics, 35, 1572--9516, 2005. BibTeX
Excision boundary conditions for black hole initial data, Cook, Gregory B. and Pfeiffer, Harald P., Phys. Rev. D, 70, 104016--24, 2004. BibTeX
Initial data for Einstein's equations with superposed gravitational waves, Harald P. Pfeiffer, Lawrence E. Kidder, Mark A. Scheel, and Deirdre Shoemaker, Phys. Rev. D, 71, 024020, 2005. BibTeX
A multidomain spectral method for solving elliptic equations, Pfeiffer, Harald P., Kidder, Lawrence E., Scheel, Mark A., and Teukolsky, Saul A., CPC, 152, 253--273, Solves nonlinear coupled 3-D elliptic equations that arise in general relativity. For a related online version, see arXiv:gr-qc/0202096, 2003. BibTeX
Comparing initial-data sets for binary black hole, Pfeiffer, Harald P., Cook, Gregory B., and Teukolsky, Saul A., PRD, 66, 024047, for a related online version, seearXiv:gr-qc/0203085, 2002. BibTeX
Initial Data for Black Hole Evolutions, Pfeiffer, Harald P., 2003. BibTeX
A fast apparent horizon algorithm, Erik Schnetter, Arxiv preprint gr-qc/0206003, 2002. BibTeX
Finding apparent horizons and other 2-surfaces of constant expansion, Erik Schnetter, Class. Quantum Grav., 20, 4719-4737, 2003. BibTeX
Algebraic multrigrid methods for constrained linear systems with applications to contact problems in solid mechanics, Adams, M. F., Numerical Linear Algebra with Applications, To appear, 2004. BibTeX
Solving Nonlinear Magnetic Problems Using Newton Trust Region Methods, H. Vande Sande, H. De Gersem, F. Henrotte, and K. Hameyer, IEEE TRANSACTIONS ON MAGNETICS, 39, 1709--1712, 2003. BibTeX
Parallelization and Integration of a Large Scale Hydrocarbon Pool Fire in the Uintah PSE, Rajesh Rawat, Jennifer P. Spinti, Wing Yee, and Philip J. Smith, In Proceedings of Ninth Internation Conference on Numerical Combustion - ICNC 2002, 49-55, Extended abstract, 2002. BibTeX
An Inherently-Parallel Method for Solving Discretized Diffusion Equations, Bradley R. Eccleston and Todd S. Palmer, Department of Nuclear Engineering, Oregon State University, Funded under the ASCI Level III: Computational Transport Issues for Large-Scale Parallel Simulations, 1999. BibTeX
A comparison of algorithms for maximum entropy Parameter estimation, Robert Malouf, In Proceedings of the Sixth Conference on Natural Language Learning (CoNLL-2002), 49-55, 2002. BibTeX
Computing the Lambda Modes of a Nuclear Reactor with SLEPc and PETSc, V. Hernandex, J. E. Roman, and V. Vidal, Submitted to CMMSE. BibTeX
Solving finite difference schemes arising in trivariate option pricing, Manfred Gilli, Evis Kellezi, and Giorgio Pauletto, Journal of Economic Dynamics and Control, 26, 1499-1515, 2002. BibTeX
Comparison of three algorithms for nonlinear metal cutting problems, C.J.Palansuriya, C-H.Lai, C.S.Ierotheou, K.A.Pericleous, and D.E.Keyes, Proceedings of the 11th International Conference on Domain Decomposition Methods, C.-H. Lai et al., 1999. BibTeX
Multi-Model Multi-Domain Computational Methods in Aerodynamics and Acoustics Web Page, David E. Keyes, Old Dominion University. BibTeX
New Generation Framework for Petroleum, Reservoir Simulation, University of Texas at Austin and Argonne National Laboratory. BibTeX
Adapting EMAP3D to parallel processing, V. Thiagarajan, K. Milfeld, and KT. Milfeld, IEEE TRANSACTIONS ON MAGNETICS , 37, 143--146, 2001. BibTeX
Parallel computation for electronic waves in quantum corrals, HK Harbury and W Porod, VLSI Design, 6, 47--51, 1998. BibTeX
Mixed Finite Element Beam Propagation Method, Mark Bludszuweit, Journal of Lightwave Technology, 16, 7, 1336--42, 1998. BibTeX
J. L. Friedman and N. Stergioulas, Astrophysics Journal, 492, 301, 1998. BibTeX
S. M. Morsink, N. Stergioulas, and S. Blattnig, Astrophysics Journal, 510, 854, 1999. BibTeX
Ph. D. thesis, N. Stergioulas, University of Wisconsin-Milwaukee, 1996. BibTeX
Solutions of TEAM Problem #13 Using Integral Equations in a Sequential and Parallel Computing Environment, L. Kettunen, K. Forsman, D. Levine, and W. Gropp, Proceedings of the Miami TEAM Workshop, 1993. BibTeX
Solutions of TEAM Problems 13 and 20 Using a Volume Integral Formulation, L. Kettunen, K. Forsman, D. Levine, and W. Gropp, Proceedings of Aix-les-Bains TEAM Workshop, 1994. BibTeX
Computational Electromagnetics and Parallel Dense Matrix Computations, L. Kettunen, K. Forsman, D. Levine, and W. Gropp, Proceedings of the SIAM Parallel Processing for Scientific Computing Conference, 1995. BibTeX
Evaluation of Multigrid as a Solver for Stress Analysis Problems in Semiconductor Process Simulation, Slobodan Mijalkovi\'c, Multigrid Methods VI: Proceedings of the Sixth European Multigrid Conference Held Gent, Belgium, September 27--30, 1999., Erik Dick, Kris Riemslagh, Jan Vierendeels, 2000. BibTeX
Mixed Finite Element Beam Propagation Method, Mark Bludszuweit, Journal of Lightwave Technology, 16, 7, 1336--42, 1998. BibTeX
Parallel Krylov Methods for Econometric Model Simulation, Manfred Gilli and Giorgio Pauletto, Computational Economics, 16, 173--186, 2000. BibTeX
PISM: a Parallel Ice Sheet Model, The PISM Team, We have developed a numerical model of ice sheets called PISM (a Parallel Ice Sheet Model). The thickness, temperature, velocity and age of the ice are all simulated, as is the deformation of the earth underneath the ice. New techniques for fast ice dynamics, earth deformation, and verification have are included.. BibTeX
OOFEM - an object oriented finite element package, Borek Patzak. BibTeX
OpenFVM - a finite volume based general purpose CFD solver, Open source development. BibTeX
DENDRO: a parallel geometric multigrid library for trilinear finite elements on octree meshes, H. Sundar, R.S. Sampath, S.S. Adavani, C. Davatzikos, and G. Biros, University of Pennsylvania. BibTeX
A computational framework for simulation of biogeochemical tracers in the ocean, Khatiwala, S., Columbia University. BibTeX
Lecture Notes in Computer Science, Xiangmin Jiao, Xiang-Yang Li, and Xiaosong Ma, 1999. BibTeX
DistSolve: An Open Source Web Service for Solving Sparse Systems of Equations, C. S. Crow IV, Hopkins Undergraduate Research Journal, 2003. BibTeX
PETSc for Python, L. Dalcin, R. Paz, and M. Storti, International Center for Computer Methods in Engineering, Provides Python bindings for PETSc via SWIG. BibTeX
CFDShip-Iowa, Pablo M. Carrica, Robert V. Wilson, and Fred Stern, University of Iowa, CFDShip-Iowa is a multiblock free surface flow solver that uses overset structured grids, designed for ship applications. BibTeX
Multiflow, Berend van Wachem, Mechanical Engineering - Chalmers University of Technology, MultiFlow is a curvlinear, multiblock, multiprocessor flowsolver for multiphase flows.. BibTeX
FENA - A Finite Element Model for the North Atlantic, Jens Schroeter, Alfred-Wegener-Institute for Polar and Marine Research. BibTeX
Magpar: Parallel Micromagnetics Code, W. Scholz, Vienna University of Technology. BibTeX
libMesh:a C++ framework for the numerical simulation of partial differential equations on serial and parallel platforms, [Online]. BibTeX
UnderWorld: A Geodynamics Modelling Code, Louis Moresi, Monash University. BibTeX
Snark: A suite of software for geoscientific applications and a philosophy of scientific software development, Victorian Partnership for Advanced Computing. BibTeX
Innovative Modern Object-Oriented Solving Environment - iMOOSE, Guido Arians, Thomas Bauer, Christian Kaehler, Wolfgang Mai, Christoph Monzel, Dirk van Riesen, and Christoph Schlensok, [Online]. BibTeX
FoSSI: Family of Simplified Solver Interfaces, offers scalable access to MPI-parallel solvers from CSR-matrix format frequently used in sequential/vector codes, Stephan Frickenhaus, AWI-Bremerhaven, Germanny. BibTeX
PETSC-FUN3D Benchmark Page, Dinesh Kaushik, ODU/ANL, CFD Benchmark of some solvers in PETSc. BibTeX
SCIRun, SCIRun Development Team, University of Utah, SCIRun now uses PETSc linear solvers. BibTeX
Prometheus - A scalable unstructured finite element solver, Mark F. Adams, Berkeley. BibTeX
Illuminator Distributed Visualization Library, Adam C. Powell, IV. BibTeX
RheoPlast Phase Field Multi-Physics Code, Adam Powell, David Dussault, and Bo Zhou. BibTeX
Toolkit for Advanced Optimization (TAO) Web Page, Steve Benson, Lois Curfman McInnes, Jorge Moré, and Jason Sarich, Mathematics and Computer Science Division, Argonne National Laboratory. BibTeX
Toolkit for Advanced Optimization (TAO) Users Manual, Steve Benson, Lois Curfman McInnes, Jorge Moré, and Jason Sarich, Argonne National Laboratory, ANL/MCS-TM-242 - Revision 1.5, 2003. BibTeX
MEF++ Web Page, Eric Chamberland, Groupe Interdisiplinaire de Recherche en Elements Finis, A finite element code for fluid dynamics, solid mechanics, thermal and multiphysics. BibTeX
Ti-PETSc - an interface to PETSc from Titanium, Berkeley. BibTeX
Multiphase flow with PETSc, Q. Zou, LANL. BibTeX
EMSolve Web page, Daniel White et al., LLNL. BibTeX
Finite element software, Kuleuven. BibTeX
PETSc Web page, Satish Balay, Kris Buschelman, Victor Eijkhout, William D. Gropp, Dinesh Kaushik, Matthew G. Knepley, Lois Curfman McInnes, Barry F. Smith, and Hong Zhang, 2007. BibTeX
Debian package for PETSc, Adam C. Powell, IV. BibTeX
Cactus Website, Provides two interface to the PETSc solvers. BibTeX
PETSc-FEM: A General Purpose, Parallel, Multi-Physics FEM Program, Mario Storti and Norberto Nigro, Centro Internacional de Metodos Computacionales en Ingenieria (CIMEC). BibTeX
FIDAP 8.5, Fluent's commercial finite element fluid code uses PETSc for parallel linear solves.. BibTeX
SLEPc Homepage, Vicente Hernández, Jos\'e E. Rom\'an, and Vicent Vidal, Scalable Library for Eigenvalue Problem Computations. BibTeX
deal.II, deal.II is a C++ library targeting adaptive finite elements and error estimation. It allows PETSc linear algebra and solvers to be used underneath.. BibTeX
Global Arrays, Jarek Nieplocha et al., Pacific Northwest National Laboratories, Global arrays can use PETSc linear solvers. BibTeX
Computación científica en paralelo con interfaz MATLAB a PETSc, Carlos D. Acosta and Carlos E. Mejía, Lecturas Matemáticas, 27, 213--224, 2006. BibTeX
Explaining StGermain: An aspect oriented environment for building extensible computational mechanics modeling software, Steve Quenette, Louis Moresi, P. D. Sunter, and Bill F. Appelbe, Parallel and Distributed Processing Symposium, IPDPS 2007, 1--8. BibTeX
Vectorized sparse matrix multiply for compressed row storage format, E. F. D'Azevedo, M. R. Fahey, and R. T. Mills, Lecture Notes in Computer Science, 3514, 99--106, 2005. BibTeX
The COOLFluiD Framework: Design Solutions for High Performance Object Oriented Scientific Computing Software, Andrea Lani, Tiago Quintino, Dries Kimpe, Herman Deconinck, Stefan Vandewalle, and Stefaan Poedts, Computational Science ICCS 2005: 5th International Conference, Lecture Notes in Computer Science, 2005. BibTeX
Desarrollo de Aplicaciones Paralelas en Python, L. Dalcin, R. Paz, and M. Storti, Proceedings of *XIV Congress on Numerical Methods and its Applications (ENIEF). Bariloche, Argentina, 2004. BibTeX
MPI for Python, L. Dalcin, R. Paz, and M. Storti, Journal of Parallel and Distributed Computing, 2005. BibTeX
SLEPc: Scalable Library for Eigenvalue Problem Computations, V. Hernandex, J. E. Roman, and V. Vidal, Submited to VecPar 2002, 2002. BibTeX
Time Dependent Solution of the Schrodinger Equation for Parallel Computers, Asbjorn Hoiland Aarrestad, Implemented Runge-Kutta methods using PETSc, 2003. BibTeX
Performance Modeling and Prediction for the Scalable Solution of Partial Differential Equations on Unstructured Grids, D. K. Kaushik, 2002. BibTeX
Object Oriented Implementation of a General Finite Element Code, Rickard Bergstrom, Chalmers Finite Element Center, Chalmers University of Technology, 2002-13, Discribes a finite element software package that uses PETSc for its solvers, 2002. BibTeX
A Parallel General Purpose Finite Element System, Enzo A. Dari, Gustavo C. Buscaglia, and Adrian J. Lew, IX SIAM Conference on Parallel Processing for Scientific Computing, Describes software that uses PETSc for its parallel linear solves, 1999. BibTeX
Parallel Components for PDEs and Optimization: Some Issues and Experiences, B. Norris, S. Balay, S. Benson, L. Freitag, P. Hovland, L. McInnes, and B. Smith, Parallel Computing, 28 (12), 1811--1831, 2002. BibTeX
Making Automatic Differentiation Truly Automatic: Coupling PETSc with ADIC, Paul Hovland, Boyana Norris, and Barry Smith, Future Generation Computer Systems, 21, 8, 1426--1438, 2005. BibTeX
Remote Access to Mathematical Software, Elizabeth Dolan, Paul Hovland, Jorge Moré, Boyana Norris, and Barry Smith, Mathematics and Computer Science Division, Argonne National Laboratory, ANL/MCS-P889-0601, 2001. BibTeX
Exploiting Existing Software in Libraries: Successes, Failures, and Reasons Why, William D. Gropp, Proceedings of the SIAM Workshop on Object Oriented Methods for Inter-operable Scientific and Engineering Computing, 21-29, 1999. BibTeX
Algorithm Development for Large Scale Computing, Matthew Knepley and Vivek Sarin, Proceedings of the SIAM Workshop on Object Oriented Methods for Inter-operable Scientific and Engineering Computing, 1999. BibTeX
CRPC Handbook of Parallel Computing, S. Balay, W. D. Gropp, L. C. McInnes, and B. F. Smith, 2002. BibTeX
Developing a Derivative-Enhanced Object-Oriented Toolkit for Scientific Computations, Paul Hovland, Boyana Norris, Lucas Roh, and Barry Smith, Proceedings of the SIAM Workshop on Object Oriented Methods for Inter-operable Scientific and Engineering Computing, 129-137, also available as Argonne preprint ANL/MCS-P731-1098, 1999. BibTeX
Efficient Management of Parallelism in Object Oriented Numerical Software Libraries, Satish Balay, William D. Gropp, Lois Curfman McInnes, and Barry F. Smith, Modern Software Tools in Scientific Computing, E. Arge, A. M. Bruaset, and H. P. Langtangen, 163--202, 1997. BibTeX
PETSc Users Manual, Satish Balay, Kris Buschelman, Victor Eijkhout, William D. Gropp, Dinesh Kaushik, Matthew~G. Knepley, Lois Curfman McInnes, Barry F. Smith, and Hong Zhang, Argonne National Laboratory, ANL-95/11 - Revision 2.3.2, see http://www.mcs.anl.gov/petsc, 2006. BibTeX
Rozwiazywanie ukladow rownan przy pomocy pakietu PETSc, Marcin Bojko and Piotr Krzyzanowski, Instytut Matematyki, Stosowanej i Mechaniki, Uniwersytet Warszawski, An introduction to PETSc in Polish, 1998. BibTeX
Integrating Automatic Differentiation with Object-Oriented Toolkits for High-Performance Scientific Computing, J. Abate, S. Benson, L. Grignon, P. Hovland, L. C. McInnes, and B. Norris, Automatic Differentiation of Algorithms: From Simulation to Optimization, George Corliss, Christèle Faure, Andreas Griewank, Laurent Hascoët, and Uwe Naumann, 2002. BibTeX
PETSc 2.0: A Case Study of Using MPI to Develop Numerical Software Libraries, Lois Curfman McInnes and Barry F. Smith, Proceedings of the MPI Developers Conference, Notre Dame, IN, 1995. BibTeX
Scalable, Extensible, and Portable Numerical Libraries, William D. Gropp and Barry F. Smith, Proceedings of the Scalable Parallel Libraries Conference, 87--93, 1994. BibTeX
Scalable Libraries for Solving Systems of Nonlinear Equations and Unconstrained Minimization Problems, William D. Gropp, Lois Curfman McInnes, and Barry F. Smith, Proceedings of the Scalable Parallel Libraries Conference, 60-67, 1995. BibTeX
The Design of Data-structure-neutral Libraries for the Iterative Solution of Sparse Linear Systems, Barry F. Smith and William D. Gropp, Scientific Programming, 5, 329--336, 1996. BibTeX
A Microkernel Design for Component-based Parallel Numerical Software Systems, Satish Balay, William D. Gropp, Lois Curfman McInnes, and Barry F. Smith, Proceedings of the SIAM Workshop on Object Oriented Methods for Inter-operable Scientific and Engineering Computing, 58-67, also available as Argonne preprint ANL/MCS-P727-0998, 1998. BibTeX
A Comparison of the PETSc Library and HPF Implementations of an Archetypal PDE Computation, M. E. Hayder, D. E. Keyes, and P. Mehrotra, Advances in Engineering Software, 29, 415-424, 1998. BibTeX
Infrastructure and Interfaces for Large-Scale Numerical Software, L. A. Freitag, W. D. Gropp, P. D. Hovland, L. C. McInnes, and B. F. Smith, Mathematics and Computer Science Division, Argonne National Laboratory, ANL/MCS-P751-0599, to appear in the Proceedings of the 1999 International Conference on Parallel and Distributed Processing Techniques and Applications, June 28 - July 1, 1999, Las Vegas, Nevada, 1999. BibTeX
On Combining Computational Differentiation and Toolkits for Parallel Scientific Computing, C. H. Bischof, H. M. Bücker, and P. D. Hovland, Euro-Par 2000 -- Parallel Processing, Proceedings of the 6th International Euro-Par Conference, Munich, Germany, August/September 2000, A. Bode, T. Ludwig, W. Karl, and R. Wismüller, 86--94, 2000. BibTeX
PETSc and Overture: Lessons Learned Developing an Interface between Components, K. R. Buschelman, W. D. Gropp, L. C. McInnes, and B. F. Smith, Proceedings of the International Federation for Information Processing Working Conference on Software Architectures for Scientific Computing, Kluwer, 57--68, 2000. BibTeX
An Interface for Efficient Vector Scatters and Gathers on Parallel Machines, Barry F. Smith, Mathematics and Computer Science Division, Argonne National Laboratory, ANL/MCS-P701. BibTeX
The Transition of Numerical Software: From Nuts-and-Bolts to Abstraction, Barry Smith, SIGNUM Newsletter, 1998. BibTeX
Using ADIFOR and ADIC to Provide a Jacobian for the SNES Component of PETSc, Christian Bischof, Paul Hovland, and Po-Ting Wu, ANL, ANL/MCS-TM-233, 1997. BibTeX
A Technique for Accelerating the Convergence of Restarted GMRES, AH Baker, ER Jessup, and T Manteuffel, SIAM JOURNAL ON MATRIX ANALYSIS AND APPLICATIONS, 2005. BibTeX
A parallel geometric multigrid method for finite elements on octree meshes, R.S. Sampath and G. Biros. BibTeX
Bottom-up construction and 2:1 balance refinement of linear octrees in parallel, H. Sundar, R.S. Sampath, and G. Biros, SIAM Journal on Scientific Computing, 2008. BibTeX
Low-constant parallel algorithms for finite element simulations using linear octrees, H. Sundar, R.S. Sampath, S.S. Adavani, C. Davatzikos, and G. Biros, SC'07: ACM/IEEE Conference on Supercomputing, 2007. BibTeX
A Parallel Maximal Independent Set Algorithm, Adams, Mark F., Proceedings 5th copper mountain conference on iterative methods, 1998 . BibTeX
Frontiers of Parallel Computing, V. Akcelik, G. Biros, Omar Ghattas, J. Hill, David Keyes, and B. van Bloemen Waanders, 2006. BibTeX
Using Distributed Computers to Deterministically Approximate Higher Dimensional Convection Diffusion Equations, Matthew F. Dixon and C. J. Kenneth Tan, The Journal of Supercomputing, 28, 235--253, 2004. BibTeX
Some Parallel Linear and Nonlinear Schwarz Methods with Applications in Computational Fluid Dynamics, Feng-Nan Hwang, 2004. BibTeX
On improving the performance of the linear solver restarted GMRES, A. H. Baker, 2003. BibTeX
Numerical Implementation of Overlapping Balancing Domain Decomposition Methods on Unstructured Meshes, Jung-Han Kimn and Blaise Bourdin, Proceedings of the 16th International Conference on Domain Decomposition Methods, 2005. BibTeX
A Parallel Implementation of Dual-Primal FETI-DP Methods for Three Dimensional Linear Elasticity Using a Transformation of Basis, Axel Klawonn and Oliver Rheinbach, Universität Duisburg-Essen, SM-E-601, 2005. BibTeX
Inexact FETI-DP Methods, Axel Klawonn and Oliver Rheinbach, Universität Duisburg-Essen, SM-E-609, 2005. BibTeX
Robust FETI-DP Methods for Heterogeneous Three Dimensional Elasticity Problems, Axel Klawonn and Oliver Rheinbach, Universität Duisburg-Essen, SM-E-607, 2005. BibTeX
Performance of a parallel mixed finite element implementation for fourth order clamped anisotropic plate bending problems in distributed memory environments, Kshitij Kulshreshtha, Neela Nataraj, and Michael Jung, Applied Mathematics and Computation, 155, 3, 753--777, 2004. BibTeX
{Using Exact Jacobians in an Implicit Newton-Krylov Method}, F. D. Bramkamp, H. M. Bücker, and A. Rasch, RWTH Aachen University, RWTH--CS--SC--04--04, 2004. BibTeX
An explicit expression for the penalty parameter of the interior penalty method, Khosro Shahbazi, Journal of Computational Physics, 205, 401--407, 2005. BibTeX
A Parallel Lanczos Algorithm for Eigensystem Calculation, Hans-Peter Kersken and Uwe Kuster, University of Stuttgart, 310, 1999. BibTeX
A component decomposition preconditioning for 3D stress analysis problems, M. D. Mihajlovi and S. Mijalkovi, Numerical Linear Algebra with Applications, 9, 567--583, 2002. BibTeX
Numerical experiments with parallel orderings for ILU preconditioners, M Benzi, W Joubert, and G Mateescu, Electronic Transactions on Numerical Analysis, 8, 88--114, 1999. BibTeX
Fast, High-Order Methods for Scattering by Inhomogeneous Media, EMK Hyde, 2003. BibTeX
Parallel Solution of Stochastic PDEs, A. Keese and H. G. Matthies, Proceedings in Applied Mathematics and Mechanics, 2, 485--486, 2003. BibTeX
Fast parallel algorithms for a broad class of nonlinear variational diffusion approaches, Joachim Weickert, Josef Heers, Christoph Schnorr, Karel J. Zuiderveld, Otmar Scherzer, and H. Siegfried Stiehl, Real Time Imaging, 7, 31--45, 2001. BibTeX
An Efficient Block Variant of GMRES, A. H. Baker, J. M. Dennis, and E. R. Jessup, University of Colorado, Boulder, CU-CS-957-03, 2003. BibTeX
Parallel Performance of Some Two-Level ASPIN Algorithms, Leszek Marcinkowski and Xiao-Chuan Cai, Proceedings of the 15th International Conference on Domain Decomposition Methods, 639--646, 2003. BibTeX
A Domain Decomposition Based Two-Level Newton Scheme for Nonlinear Problems, Deepak V. Kulkarni and Daniel A. Tortorelli, Proceedings of the 15th International Conference on Domain Decomposition Methods, 615--622, 2003. BibTeX
Some Computational Results for Dual-Primal FETI Methods for Elliptic Problems in 3D, Axel Klawonn, Oliver Rheinbach, and Olof B. Widlund, Proceedings of the 15th International Conference on Domain Decomposition Methods, 361--368, 2003. BibTeX
Improving Robustness and Parallel Scalability of Newton's Method Through Nonlinear Preconditioning, Feng-Nan Hwang and Xiao-Chuan Cai, Proceedings of the 15th International Conference on Domain Decomposition Methods, 201--208, 2003. BibTeX
Balancing Neumann-Neumann for (In)Compressible Linear Elasticity and (Generalized) Stokes and Parallel Implementation, P. Goldfeld, Proceedings of the 14th International Conference on Domain Decomposition Methods, I. Herrera, D. Keyes, O. Widlund, and R. Yates, 209--216, 2003. BibTeX
Toward scalable FETI algorithm for variational inequalities with applications to composites, Zdenek Dostal, David Horak, and Oldrich Vlach, Proceedings of the 14th International Conference on Domain Decomposition Methods, I. Herrera, D. Keyes, O. Widlund, and R. Yates, 395--401, 2003. BibTeX
Scalabilities of FETI for variational inequalities and contact shape optimization, Zdenek Dostal, David Horak, Jan Szweda, and Vit Vondrak, Proceedings of the 13th International Conference on Domain Decomposition Methods, N. Debit, M.Garbey, R. Hoppe, J. Periaux, D. Keyes, and Y. Kuznetsov, 359--367, 2002. BibTeX
A Nonlinear Additive Schwarz Preconditioned Inexact Newton Method for Shocked Duct Flows, Xiao-Chuan Cai, David E. Keyes, and David P. Young, Proceedings of the 13th International Conference on Domain Decomposition Methods, N. Debit, M.Garbey, R. Hoppe, J. Periaux, D. Keyes, and Y. Kuznetsov, 343--350, 2002. BibTeX
Multiplicative-additive preconditioning combination for general sparse linear systems, Li, Z., Lanteri S., and Saad, Y., 2003. BibTeX
Model Reduction for Large Scale Applications in Microsystem Technology, Abul K. M. Fahimuddin and Heike Fassbender, Proceedings of the 2004 SIAM Parallel Processing Conference, 2003. BibTeX
A New Parallel Kernel-independent Fast Multipole Method, Lexing Ying, G. Biros, D. Zorin, and H. Langston, Proceedings of the ACM/IEEE conference on Supercomputing 2003, Winner of the the Best Student Paper at SC2003, 2003. BibTeX
Parallel Computation of a Fully Implicit Finite Volume Method Using Different Ordering Strategies, Masoud Darbandi, Gerry E. Schneider, and Seyed Mehi Bostandoost, Proceedings of AIAA Conference, Reno, Nevada, 2004. BibTeX
A Comparative Study of Preconditioned Methods for Solving Fully Coupled Fluid Flow Equations, Masoud Darbandi, Gerry E. Schneider, and Soheyl Vakili, The 13th Annual Conference on Computational Fluid Dynamics, 2005. BibTeX
The Employment of Algebraic Multigrid as a Preconditioner to Solve Fully Implicit Mixed Convection Equations, Masoud Darbandi, Soheyl Vakili, and Gerry E. Schneider, The 44th AIAA Aerospace Sciences Meeting and Exhibit, 2006. BibTeX
Using Different Preconditioned Krylov Subspace Methods to Solve Coupled Fluid Flow Equations, Masoud Darbandi, Gerry E. Schneider, and Soheyl Vakili, Computational Fluid Dynamics, 15, 1, 2006. BibTeX
An Algebraic Multilevel Preconditioner for Field-Circuit Coupled Problems, Lahaye, D., Vandewalle, S., and Hameyer, K., J. Comput. Appl. Math., 168, 267--275, 2004. BibTeX
Faster PDE-based Simulations Using Robust Composite Linear Solvers, S. Bhowmick, P. Raghavan, L. McInnes, and B. Norris, ANL, ANL/MCS-P993-0902, To appear in Future Generation Computer Systems, 2002. BibTeX
Adaptive Sparse Linear Solvers for Implicit CFD Using Newton-Krylov Algorithms, L. McInnes, B. Norris, S. Bhowmick, and P. Raghavan, Proceedings of the Second MIT Conference on Computational Fluid and Solid Mechanics, 2003. BibTeX
The Role of Multi-Method Linear Solvers in PDE-based Simulations, S. Bhowmick, L. McInnes, B. Norris, and P. Raghavan, Proceedings of the 2003 International Conference on Computational Science and its Applications, Lecture notes in Computer Science 2677, V. Kumar, M. L. Gavrilova, C. J. K. Tan, and P. L'Ecuyer, 828--839, 2003. BibTeX
Newton-Krylov-FAC Methods for Problems Discretized on Locally Refined Grids, M. Pernice and R. D. Hornung, Computing and Visualization in Science, 2003. BibTeX
Parallel multigrid smoothing: polynomial versus Gauss-Seidel, Adams, M. F., Brezina, M., Hu, J. J., and Tuminaro, R. S., Submitted to JCP. BibTeX
Static and Dynamic Graph Partitioning. A comparative study of existing algorithms, Ulrich Elsner, 2002. BibTeX
Pseudo-Transient Continuation and Differential-Algebraic Equations, Todd S. Coffey, C. T. Kelley, and David E. Keyes, ODU, Submitted to the special issue of the SIAM Journal of Scientific Computing dedicated to papers from the 2002 Copper Mountain Conference on Iterative Methods, 2002. BibTeX
Balancing Neumann-Neumann Preconditioners for Mixed Approximations of Heterogeneous Problems in Linear Elasticity, Paulo Goldfeld, Luca F. Pavarino, and Olof B. Widlund, Numerische Mathematik, 95, 283--324, 2003. BibTeX
Scalability and FETI based algorithm for large discretized variational inequalities, Z Dostal and D Horak, Mathematics and Computers in Simulation, 61, 347--357, 2003. BibTeX
36 Scalabilities of FETI for Variational Inequalities and Contact Shape Optimization, Zdenek Dostal, David Horak, Jan Szweda, and Vit Vondrak, Proceedings of the 13th International Conference on Domain Decomposition Methods, N. Debit, M. Garbey, R. Hoppe, J. Periaus, D. Keyes, and Y. Kuznetsov. BibTeX
An Algebraic Multilevel Preconditioner for Field-Circuit Coupled Problems, Domenico Lahaye, S. Vandewalle, and K. Hameyer, IEEEMAGN, 38, 2, 413-416, 2002. BibTeX
Nonlinear additive Schwarz preconditioners and applications in computational fluid dynamics, X.-C. Cai, D. E. Keyes, and L. Marcinkowski, International Journal of Numerical Methods in Fluid Mechanics, 40, 1463--1470, 2002. BibTeX
A nonlinear additive Schwarz preconditioned inexact Newton method for shocked duct flow, X.-C. Cai, D. E. Keyes, and D. P. Young, Proceedings of the 13th International Conference on Domain Decomposition Methods, N. Debit, M. Garbey, R. Hoppe, J. Periaus, D. Keyes, and Y. Kuznetsov, 2002. BibTeX
Nonlinearly preconditioned inexact Newton algorithms, X.-C. Cai and D. E. Keyes, SIAM J. Sci. Comput., 24, 183--200, 2002. BibTeX
A parallel nonlinear additive Schwarz preconditioned inexact Newton algorithm for incompressible Navier-Stokes equations, Feng-Nan Hwang and X.-C. Cai, Journal of Computational Physics, 204, 666--691, 2005. BibTeX
A Class of Parallel Two-Level Nonlinear Schwarz Preconditioned Inexact Newton Algorithms, Feng-Nan Hwang and X.-C. Cai, Computer Methods in Applied Mechanics and Engineering, 196, 1603--1611, 2006. BibTeX
A Distributed Memory Unstructured Gauss-Seidel Algorithm for Multigrid Smoothers, Mark F. Adams, ACM/IEEE Proceedings of SC2001: High Performance Networking and Computing, 2001 . BibTeX
Algebraic Multigrid for Two Dimensional Time-Harmonic Magnetic Field Computations, Domenico Lahaye, Katholieke Universiteit Leuven, 2001. BibTeX
Evaluation of Three Unstructured Multigrid Methods on 3D Finite Element Problems in Solid Mechanics, Mark F. Adams, International Journal for Numerical Methods in Engineering, To Appear. BibTeX
Algebraic Multigrid for Complex Symmetric Systems, Domenico Lahaye, De Gersem, H., Vandewalle, S., and Hameyer, K., IEEEMAGN, 36, 4, 1535--1538, 2000. BibTeX
Parallel Multigrid Solvers for 3D Unstructured Finite Element Problems in Large Deformation Elasticity and Plasticity, Mark F. Adams, International Journal for Numerical Methods in Engineering, 48, 8, 1241-1262, 2000. BibTeX
Parallel Multigrid Solver Algorithms and Implementations for 3D Unstructured Finite Element Problems, Mark F. Adams and J. Demmel, Proceedings of SC99: High Performance Networking and Computing, 1999 . BibTeX
Overlapping Schwarz Methods on Unstructured Meshes using Non-matching Coarse Grids, T. Chan, B. Smith, and J. Zou, Numer. Math., 73, 149--167, 1995. BibTeX
A Parallel Maximal Independent Set Algorithm, Mark F. Adams and James Demmel, University of California, Berkeley, CSD-98-993, 1998. BibTeX
An Optimal Preconditioner for a Class of Saddle Point Problems with a Penalty Term, Axel Klawonn, New York University, TR1994-676, 1994. BibTeX
Preconditioners for Indefinite Problems, Axel Klawonn, Westfalishen Wilhelms-Universitat Munster, 1995. BibTeX
Optimal Evaluation of Finite Element Matrices, Robert C. Kirby, Matthew G. Knepley, and L. Ridgway Scott, University of Chicago, TR-2004-04, 2004. BibTeX
Flexible Representation of Computational Meshes, Matthew G. Knepley and Dmitry A. Karpeev, Argonne National Laboratory, ANL/MCS-P1295-1005, 2005. BibTeX
Mesh Algorithms for PDE with Sieve I: Mesh Distribution, Matthew G. Knepley and Dmitry A. Karpeev, Argonne National Laboratory, ANL/MCS-P1455-0907, 2007. BibTeX
Mesh Algorithms for PDE with Sieve I: Mesh Distribution, Matthew G. Knepley and Dmitry A. Karpeev, Scientific Programming, to appear, 2008. BibTeX
Sieve Concepts and Interfaces, Matthew G. Knepley and Dmitry A. Karpeev, Argonne National Laboratory, ANL/MCS-P????-????, 2007. BibTeX
Sieve Implementation, Matthew G. Knepley and Dmitry A. Karpeev, Argonne National Laboratory, ANL/MCS to appear, 2008. BibTeX
Parallel Programming with MPI, Peter Pacheco, Morgan-Kaufmann, Devotes a couple of sections to PETSc, 1997. BibTeX
Domain Decomposition: Parallel Multilevel Methods for Elliptic Partial Differential Equations, Barry F. Smith, Petter Bjørstad, and William D. Gropp, Cambridge University Press, 1996. BibTeX
ParPre Web Page, Victor Eijkhout, University of Tennessee, This is no longer supported. A set of preconditioners built on PETSc. BibTeX
Development of software for studying earthquakes across multiple spatial and temporal scales by coupling quasi-static and dynamic simulations, Charles A. Williams, Brad Aagaard, and Matthew G. Knepley, Eos Transactions of the AGU, Fall Meeting Supplemental, Abstract S53A-1072, 2005. BibTeX
Modeling of Multiple Earthquake Cycles in Southern California Using the SCEC Community Fault Model, Charles A. Williams, Carl Gable, Bradford H. Hager, Brendan Meade, Brad Aagaard, and Matthew G. Knepley, Proceedings of Geosciences '08, 2008. BibTeX