Xylella fastidiosa 9a5c

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178039-178138 (1-100) 178139-178238 (101-200) 178239-178338 (201-300) 178339-178438 (301-400) 178439-178538 (401-500)
[178539-178638 (501-600)] 178639-178738 (601-700) 178739-178838 (701-800) 178839-178938 (801-900) 178939-179038 (901-1000)
179039-179138 (1001-1100) 179139-179238 (1101-1200) 179239-179338 (1201-1300) 179339-179438 (1301-1400) 179439-179538 (1401-1500)
179539-179638 (1501-1600) 179639-179738 (1601-1700) 179739-179838 (1701-1800) 179839-179938 (1801-1900) 179939-180038 (1901-2000)
180039-180138 (2001-2100) 180139-180238 (2101-2200) 180239-180338 (2201-2300) 180339-180438 (2301-2400) 180439-180538 (2401-2500)
180539-180638 (2501-2600) 180639-180738 (2601-2700) 180739-180804 (2701-2766)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178539 hypothetical XF0504 hypothetical protein genbank 15837106 NP_297794.1 73 499492 499713
178540 hypothetical XF0505 hypothetical protein
hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -9
genbank 15837107 NP_297795.1 350 499912 500964
178541 hypothetical XF0506 virulence-associated protein E
similar to GI|563258 (percent identity: 31 %/query alignment coverage: 86.9 %/subject alignment coverage: 97.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837108 NP_297796.1 488 500964 502430
178542 hypothetical XF0507 hypothetical protein genbank 15837109 NP_297797.1 196 502845 503435
178543 hypothetical XF0508 phage-related terminase large subunit
similar to SP|P36693 (percent identity: 25 %/query alignment coverage: 92.8 %/subject alignment coverage: 101.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837110 NP_297798.1 699 503432 505531
178544 hypothetical XF0509 hypothetical protein genbank 15837111 NP_297799.1 78 505817 506053
178545 hypothetical XF0510 hypothetical protein
similar to GI|6723246 (percent identity: 25 %/query alignment coverage: 88.5 %/subject alignment coverage: 97.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837112 NP_297800.1 520 506050 507612
178546 hypothetical XF0511 hypothetical protein
hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 168
genbank 15837113 NP_297801.1 752 507660 509918
178547 hypothetical XF0512 hypothetical protein genbank 15837114 NP_297802.1 119 509991 510350
178548 hypothetical XF0513 phage-related endolysin
similar to SP|P27359 (percent identity: 46 %/query alignment coverage: 81.8 %/subject alignment coverage: 76.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837115 NP_297803.1 154 510678 511142
178549 hypothetical XF0514 hypothetical protein genbank 15837116 NP_297804.1 140 511121 511543
178550 hypothetical XF0515 hypothetical protein genbank 15837117 NP_297805.1 261 511664 512449
178551 hypothetical XF0516 hypothetical protein genbank 15837118 NP_297806.1 106 512446 512766
178552 hypothetical XF0517 hypothetical protein genbank 15837119 NP_297807.1 162 512748 513236
178553 hypothetical XF0518 hypothetical protein genbank 15837120 NP_297808.1 249 513233 513982
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178554 hypothetical XF0519 hypothetical protein
hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -3
genbank 15837121 NP_297809.1 148 513979 514425
178555 hypothetical XF0520 hypothetical protein genbank 15837122 NP_297810.1 55 514422 514589
178556 hypothetical XF0521 hypothetical protein
similar to GI|6863126 (percent identity: 21 %/query alignment coverage: 90.4 %/subject alignment coverage: 93.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837123 NP_297811.1 837 514590 517103
178557 hypothetical XF0522 hypothetical protein genbank 15837124 NP_297812.1 395 517096 518283
178558 hypothetical XF0523 hypothetical protein genbank 15837125 NP_297813.1 480 518273 519715
178559 hypothetical XF0524 hypothetical protein genbank 15837126 NP_297814.1 142 519706 520134
178560 hypothetical XF0525 hypothetical protein genbank 15837127 NP_297815.1 78 520131 520367
178561 hypothetical XF0526 hypothetical protein genbank 15837128 NP_297816.1 941 520357 523182
178562 hypothetical XF0527 hypothetical protein
hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 33
genbank 15837129 NP_297817.1 170 523175 523687
178563 hypothetical XF0528 hypothetical protein genbank 15837130 NP_297818.1 95 523823 524110
178564 hypothetical XF0529 hypothetical protein genbank 15837131 NP_297819.1 231 524186 524881
178565 hypothetical XF0530 hypothetical protein genbank 15837132 NP_297820.1 41 525069 525194
178566 hypothetical XF0531 hypothetical protein genbank 15837133 NP_297821.1 334 525339 526343
178567 hypothetical XF0532 hypothetical protein genbank 15837134 NP_297822.1 97 526772 527065
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178568 hypothetical XF0533 hypothetical protein
similar to GI|1652487 (percent identity: 43 %/query alignment coverage: 92.6 %/subject alignment coverage: 64.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837135 NP_297823.1 95 527049 527336
178569 hypothetical XF0534 hypothetical protein genbank 15837136 NP_297824.1 114 527619 527963
178570 hypothetical XF0535 transposase OrfA
similar to GI|6176523 (percent identity: 64 %/query alignment coverage: 64.4 %/subject alignment coverage: 30.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837137 NP_297825.1 104 528651 528965
178571 hypothetical XF0536 transposase OrfB
similar to GI|6176524 (percent identity: 35 %/query alignment coverage: 84.4 %/subject alignment coverage: 78.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -324
genbank 77747504 NP_297826.2 347 529095 530138
178572 hypothetical XF0537 hypothetical protein
similar to GI|1628368 (percent identity: 27 %/query alignment coverage: 62.2 %/subject alignment coverage: 53.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -36
genbank 15837139 NP_297827.1 135 530235 530642
178573 hypothetical XF0538 fimbrillin
similar to GI|1073087 (percent identity: 37 %/query alignment coverage: 95.2 %/subject alignment coverage: 130.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837140 NP_297828.1 186 530636 531196
178574 hypothetical XF0539 fimbrillin
similar to GI|2801829 (percent identity: 38 %/query alignment coverage: 64.7 %/subject alignment coverage: 82.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837141 NP_297829.1 187 531197 531760
178575 hypothetical XF0540 hypothetical protein genbank 15837142 NP_297830.1 126 532316 532696
178576 hypothetical XF0541 hypothetical protein genbank 15837143 NP_297831.1 61 532672 532857
178577 hypothetical XF0542 hypothetical protein genbank 15837144 NP_297832.1 62 532901 533089
178578 hypothetical XF0543 hypothetical protein
hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -96
genbank 15837145 NP_297833.1 222 533197 533865
178579 hypothetical XF0544 hypothetical protein genbank 15837146 NP_297834.1 55 533877 534044
178580 hypothetical XF0545 hypothetical protein genbank 15837147 NP_297835.1 60 534020 534202
178581 hypothetical XF0546 hypothetical protein genbank 15837148 NP_297836.1 66 534357 534557
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178582 hypothetical XF0547 ferredoxin
Involved in the electron transport chain
genbank 15837149 NP_297837.1 159 534674 535153
178583 hypothetical XF0548 hypothetical protein genbank 15837150 NP_297838.1 53 535158 535319
178584 hypothetical XF0549 methionyl-tRNA synthetase
Required for both initiation of translation and elongation of protein synthesis
genbank 77747505 NP_297839.2 690 535409 537481
178585 hypothetical XF0550 hypothetical protein
similar to GI|2529416 (percent identity: 27 %/query alignment coverage: 97.4 %/subject alignment coverage: 104.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837152 NP_297840.1 1041 537646 540771
178586 hypothetical XF0551 hypothetical protein genbank 15837153 NP_297841.1 64 540833 541027
178587 hypothetical XF0552 hypothetical protein
similar to SP|P45528 (percent identity: 52 %/query alignment coverage: 98.9 %/subject alignment coverage: 94.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837154 NP_297842.1 273 541289 542110
178588 hypothetical XF0553 hypothetical protein
similar to SP|P45299 (percent identity: 23 %/query alignment coverage: 105.6 %/subject alignment coverage: 105.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 105
genbank 15837155 NP_297843.1 576 542192 543922
178589 hypothetical XF0554 hypothetical protein
similar to SP|P45465 (percent identity: 48 %/query alignment coverage: 95.9 %/subject alignment coverage: 88.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837156 NP_297844.1 121 543926 544291
178590 hypothetical XF0555 hypothetical protein genbank 15837157 NP_297845.1 60 544425 544607
178591 hypothetical XF0556 ribosome-associated GTPase
circularly permuted GTPase; has the pattern G4-G1-G3 as opposed to other GTPases; indispensable for growth in Escherichia coli and Bacillus subtilis; interacts strongly with 30S ribosome which stimulates GTPase activity
genbank 15837158 NP_297846.1 341 544600 545625
178592 hypothetical XF0557 electron transfer protein azurin I
similar to GI|3721762 (percent identity: 49 %/query alignment coverage: 96.0 %/subject alignment coverage: 96.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -102
genbank 15837159 NP_297847.1 151 545847 546302
178593 hypothetical XF0558 hypothetical protein genbank 15837160 NP_297848.1 41 546449 546574
178594 hypothetical XF0559 hypothetical protein genbank 15837161 NP_297849.1 62 547063 547251
178595 hypothetical XF0560 glutamine amidotransferase
Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group
genbank 15837162 NP_297850.1 240 547223 547945
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178596 hypothetical XF0561 hypothetical protein genbank 77747506 NP_297851.2 298 548216 549112
178597 hypothetical XF0562 sec-independent protein translocase
similar to SP|P27857 (percent identity: 47 %/query alignment coverage: 92.7 %/subject alignment coverage: 88.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837164 NP_297852.1 246 549180 549920
178598 hypothetical XF0563 sec-independent translocase
mediates the export of protein precursors bearing twin-arginine signal peptides
genbank 15837165 NP_297853.1 140 549917 550339
178599 tatA hypothetical XF0564 twin argininte translocase protein A
TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar t
genbank 15837166 NP_297854.1 71 550357 550572
178600 hypothetical XF0565 hypothetical protein
similar to GI|4981219 (percent identity: 44 %/query alignment coverage: 47.2 %/subject alignment coverage: 65.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837167 NP_297855.1 301 550647 551552
178601 hypothetical XF0566 ferrochelatase
Catalyzes the ferrous insertion into protoporphyrin IX
genbank 15837168 NP_297856.1 337 551674 552687
178602 hypothetical XF0567 hypothetical protein
similar to GI|5051589 (percent identity: 24 %/query alignment coverage: 90.2 %/subject alignment coverage: 99.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837169 NP_297857.1 254 553023 553787
178603 rdgC hypothetical XF0568 recombination associated protein
Required for efficient pilin antigenic variation
genbank 15837170 NP_297858.1 302 553855 554763
178604 hypothetical XF0569 hypothetical protein
similar to SP|Q57184 (percent identity: 59 %/query alignment coverage: 87.5 %/subject alignment coverage: 87.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 77747507 NP_297859.2 299 554802 555701
178605 hypothetical XF0570 hypothetical protein genbank 15837172 NP_297860.1 76 556098 556328
178606 hypothetical XF0571 hypothetical protein genbank 15837173 NP_297861.1 56 556369 556539
178607 hypothetical XF0572 3-hydroxydecanoyl-ACP dehydratase
catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
genbank 15837174 NP_297862.1 173 556753 557274
178608 hypothetical XF0573 hypothetical protein genbank 15837175 NP_297863.1 57 557480 557653
178609 hypothetical XF0574 hypothetical protein genbank 15837176 NP_297864.1 136 557691 558101
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178610 hypothetical XF0575 hypothetical protein genbank 15837177 NP_297865.1 116 558092 558442
178611 hypothetical XF0576 metallopeptidase
similar to GI|2909596 (percent identity: 37 %/query alignment coverage: 93.1 %/subject alignment coverage: 98.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837178 NP_297866.1 700 558463 560565
178612 hypothetical XF0577 hypothetical protein genbank 15837179 NP_297867.1 49 560716 560865
178613 hypothetical XF0578 hypothetical protein genbank 15837180 NP_297868.1 45 560900 561037
178614 hypothetical XF0579 hypothetical protein genbank 15837181 NP_297869.1 73 561109 561330
178615 hypothetical XF0580 thymidylate kinase
catalyzes the phosphorylation of dTMP to form dTDP
genbank 15837182 NP_297870.1 217 561340 561993
178616 hypothetical XF0581 hypothetical protein genbank 15837183 NP_297871.1 69 562089 562298
178617 hypothetical XF0582 hypothetical protein genbank 15837184 NP_297872.1 63 562336 562527
178618 hypothetical XF0583 hypothetical protein genbank 77747508 NP_297873.2 227 562566 563249
178619 hypothetical XF0584 hypothetical protein genbank 77747509 NP_297874.2 285 563253 564110
178620 hypothetical XF0585 phosphoribosylglycinamide formyltransferase
Catalyzes two reactions: the first one is the production of beta-formyl glycinamide ribonucleotide (GAR) from formate, ATP and beta GAR; the second, a side reaction, is the production of acetyl phosphate and ADP from acetate and ATP
genbank 15837187 NP_297875.1 222 564176 564844
178621 hypothetical XF0586 hypothetical protein genbank 15837188 NP_297876.1 97 564862 565155
178622 hypothetical XF0587 phosphoribosylaminoimidazole synthetase
catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
genbank 15837189 NP_297877.1 351 565157 566212
178623 hypothetical XF0588 hypothetical protein genbank 15837190 NP_297878.1 390 566263 567435
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178624 hypothetical XF0589 permease
similar to GI|3861171 (percent identity: 28 %/query alignment coverage: 90.1 %/subject alignment coverage: 98.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837191 NP_297879.1 385 567432 568589
178625 hypothetical XF0590 hypothetical protein
similar to SP|P76570 (percent identity: 36 %/query alignment coverage: 97.4 %/subject alignment coverage: 91.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837192 NP_297880.1 233 568586 569287
178626 hypothetical XF0591 virulence factor
similar to GI|4545244 (percent identity: 48 %/query alignment coverage: 98.8 %/subject alignment coverage: 105.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837193 NP_297881.1 240 569473 570195
178627 hypothetical XF0592 hypothetical protein
similar to GI|4545243 (percent identity: 47 %/query alignment coverage: 89.1 %/subject alignment coverage: 97.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837194 NP_297882.1 368 570192 571298
178628 hypothetical XF0593 hypothetical protein
similar to SP|Q57134 (percent identity: 49 %/query alignment coverage: 57.8 %/subject alignment coverage: 56.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837195 NP_297883.1 109 571736 572065
178629 hypothetical XF0594 thiamine biosynthesis lipoprotein ApbE precursor
similar to SP|P33944 (percent identity: 33 %/query alignment coverage: 99.4 %/subject alignment coverage: 88.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837196 NP_297884.1 311 572810 573745
178630 hypothetical XF0595 hypothetical protein genbank 15837197 NP_297885.1 267 573856 574659
178631 hypothetical XF0596 hypothetical protein
similar to GI|6459571 (percent identity: 33 %/query alignment coverage: 69.0 %/subject alignment coverage: 61.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837198 NP_297886.1 174 574684 575208
178632 hypothetical XF0597 hypothetical protein
similar to GI|6459570 (percent identity: 30 %/query alignment coverage: 96.8 %/subject alignment coverage: 102.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837199 NP_297887.1 218 575234 575890
178633 hypothetical XF0598 putative hydroxylase
similar to GI|2981041 (percent identity: 51 %/query alignment coverage: 99.6 %/subject alignment coverage: 101.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837200 NP_297888.1 230 575900 576592
178634 hypothetical XF0599 TonB-dependent receptor for iron transport
similar to SP|P75780 (percent identity: 47 %/query alignment coverage: 96.3 %/subject alignment coverage: 98.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837201 NP_297889.1 776 576636 578966
178635 hypothetical XF0600 hypothetical protein genbank 15837202 NP_297890.1 136 579289 579699
178636 hypothetical XF0601 hypothetical protein genbank 15837203 NP_297891.1 297 579699 580592
178637 hypothetical XF0602 hypothetical protein genbank 15837204 NP_297892.1 73 580922 581143
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178638 hypothetical XF0603 cystathionine beta-synthase
similar to SP|P46794 (percent identity: 31 %/query alignment coverage: 103.7 %/subject alignment coverage: 95.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837205 NP_297893.1 456 581277 582647


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