Ubiquitin specific protease 48 (Usp48)

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UGID:889811 UniGene Rn.100022 Rattus norvegicus (Norway rat) Usp48

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Ubiquitin specific protease 48 (Usp48)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_942080.1	ubiquitin specific protease 48	R. norvegicus	100.0	1035
NP_570949.2	ubiquitin specific protease 48	M. musculus	97.0	1051
NP_115612.4	ubiquitin specific protease 48 isoform a	H. sapiens	95.3	1034
NP_001019581.1	hypothetical protein LOC554111	D. rerio	75.0	507

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	embryonic tissue; mixed; eye; kidney; artery; connective tissue; brain; ovary; lung; placenta; prostate; pituitary gland; small intestine; uncharacterized tissue; heart; thymus; liver; spleen; inner ear; pancreas; muscle

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	5
Map position:	5q36
UniSTS entry:		RH128097
UniSTS entry:		AW533548

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	AB073880.1	Rattus norvegicus synUSP mRNA for synaptic ubiquitin-specific protease, complete cds	PA
	NM_198785.1	Rattus norvegicus ubiquitin specific protease 48 (Usp48), mRNA	PA

EST sequences (10 of 69) [Show all sequences]

AA859745.1	Clone UI-R-E0-bx-b-11-0-UI	embryonic tissue	3' read	A
AA924007.1	Clone UI-R-A1-dq-h-10-0-UI	mixed	3' read	A
AI013256.1	Clone RSPBI71	spleen	3' read	A
AI170116.1	Clone RLUCC59	lung	3' read	A
AI171345.1	Clone RMUBJ45	muscle	3' read	A
AI710571.1	Clone UI-R-AG1-aal-f-09-0-UI	heart	3' read	PA
AW143413.1	Clone RGIBT70	embryonic tissue	5' read
AI406922.1	Clone ROVDV04	ovary	3' read	P
AW254606.1	Clone UI-R-BJ0-aep-d-06-0-UI	heart	3' read	P
AW533590.1	Clone UI-R-BU0-and-g-03-0-UI	eye	3' read	PA

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria