C p2_simple

DTASelect v1.9
/data1/ms/shew/shew_thompson/global_analysis/Contrast/dosage/tryptic_1/interfractions/control/p2_simple

Included directories:	Location	Hidden
control_crude_run1	/auto/gtl/ms/shew/shew_thompson/global_analysis/Contrast/dosage/tryptic_1/runs/control_run1/crude/sequest	false
control_crude_run2	/auto/gtl/ms/shew/shew_thompson/global_analysis/Contrast/dosage/tryptic_1/runs/control_run2/crude/sequest	false
control_memb_run1	/auto/gtl/ms/shew/shew_thompson/global_analysis/Contrast/dosage/tryptic_1/runs/control_run1/memb/sequest	false
control_memb_run2	/auto/gtl/ms/shew/shew_thompson/global_analysis/Contrast/dosage/tryptic_1/runs/control_run2/memb/sequest	false

Criteria sets:

2pep_def
-p 2

true Use criteria

1.8 Minimum +1 XCorr

2.5 Minimum +2 XCorr

3.5 Minimum +3 XCorr

0.08 Minimum DeltCN

1 Minimum charge state

3 Maximum charge state

0.0 Minimum ion proportion

1000 Maximum Sp rank

-1.0 Minimum Sp score

Include Modified peptide inclusion

Any Tryptic status requirement

true Multiple, ambiguous IDs allowed

Ignore Peptide validation handling

XCorr Purge duplicate peptides by protein

false Include only loci with unique peptide

false Remove subset proteins

Ignore Locus validation handling

0 Minimum modified peptides per locus

10 Minimum redundancy for low coverage loci

2 Minimum peptides per locus

Numbers in table report the percentage of residues in protein sequence that are represented by at least one peptide passing the criteria.
Jump to summary table.

Locus control_crude_run1
2pep_def control_crude_run2
2pep_def control_memb_run1
2pep_def control_memb_run2
2pep_def Total Description

SO0008 17.4 10.9 5.0 7.4 18.9 chromosomal replication initiator protein DnaA (dnaA) {Shewanella oneidensis MR-1} MW: 51970.35 pI: 8.61

SO0021 18.2 14.8 8.8 5.3 20.0 fatty oxidation complex, alpha subunit (fadB) {Shewanella oneidensis MR-1} MW: 76692.77 pI: 5.84

SO0052 43.9 37.6 37.6 31.8 43.9 protein-export protein SecB (secB) {Shewanella oneidensis MR-1} MW: 17096.16 pI: 4.43

SO0166 8.8 8.8 22.9 18.6 24.6 general secretion pathway protein D (gspD) {Shewanella oneidensis MR-1} MW: 76859.75 pI: 5.45

SO0217 56.9 51.3 58.9 51.8 63.7 translation elongation factor Tu (tufB) {Shewanella oneidensis MR-1} MW: 43347.65 pI: 5.13

SO0220 62.7 62.7 38.0 21.1 62.7 ribosomal protein L11 (rplK) {Shewanella oneidensis MR-1} MW: 15107.63 pI: 9.64

SO0221 73.8 77.3 34.3 25.8 77.3 ribosomal protein L1 (rplA) {Shewanella oneidensis MR-1} MW: 24600.65 pI: 9.59

SO0222 79.5 77.1 59.6 58.4 79.5 ribosomal protein L10 (rplJ) {Shewanella oneidensis MR-1} MW: 17743.41 pI: 9.07

SO0223 38.5 26.2 29.5 29.5 38.5 ribosomal protein L7/L12 (rplL) {Shewanella oneidensis MR-1} MW: 12516.40 pI: 4.63

SO0224 48.8 50.6 12.8 14.6 54.3 DNA-directed RNA polymerase, beta subunit (rpoB) {Shewanella oneidensis MR-1} MW:150295.71 pI: 5.28

SO0225 39.0 34.2 9.4 9.6 40.9 DNA-directed RNA polymerase, beta subunit (rpoC) {Shewanella oneidensis MR-1} MW:155520.41 pI: 5.97

SO0227 57.1 57.7 47.4 48.1 57.7 ribosomal protein S7 (rpsG) {Shewanella oneidensis MR-1} MW: 17730.73 pI:10.21

SO0229 57.4 51.8 59.4 52.3 64.2 translation elongation factor Tu (tufA) {Shewanella oneidensis MR-1} MW: 43284.60 pI: 5.08

SO0230 40.8 36.9 30.1 30.1 47.6 ribosomal protein S10 (rpsJ) {Shewanella oneidensis MR-1} MW: 11768.63 pI: 9.76

SO0231 58.5 55.2 28.3 36.3 58.5 ribosomal protein L3 (rplC) {Shewanella oneidensis MR-1} MW: 22531.91 pI: 9.94

SO0232 40.8 39.3 28.9 32.3 44.3 ribosomal protein L4 (rplD) {Shewanella oneidensis MR-1} MW: 21981.39 pI: 9.60

SO0233 44.6 30.7 34.7 20.8 44.6 ribosomal protein L23 (rplW) {Shewanella oneidensis MR-1} MW: 11067.87 pI: 9.85

SO0234 31.4 31.4 20.1 25.2 38.3 ribosomal protein L2 (rplB) {Shewanella oneidensis MR-1} MW: 29963.74 pI:10.86

SO0236 60.0 60.0 53.6 40.9 65.5 ribosomal protein L22 (rplV) {Shewanella oneidensis MR-1} MW: 12071.20 pI:10.22

SO0237 53.5 53.5 53.5 53.5 53.5 ribosomal protein S3 (rpsC) {Shewanella oneidensis MR-1} MW: 25754.92 pI:10.05

SO0238 49.3 47.8 43.4 47.8 49.3 ribosomal protein L16 (rplP) {Shewanella oneidensis MR-1} MW: 15396.41 pI:11.37

SO0239 22.2 38.1 22.2 22.2 38.1 ribosomal protein L29 (rpmC) {Shewanella oneidensis MR-1} MW: 7170.44 pI:10.51

SO0241 36.9 35.2 27.9 27.9 44.3 ribosomal protein L14 (rplN) {Shewanella oneidensis MR-1} MW: 13455.90 pI:10.75

SO0242 51.0 41.3 36.5 35.6 51.0 ribosomal protein L24 (rplX) {Shewanella oneidensis MR-1} MW: 11318.38 pI:10.29

SO0243 67.6 65.9 50.8 50.8 68.7 ribosomal protein L5 (rplE) {Shewanella oneidensis MR-1} MW: 20231.66 pI: 9.28

SO0244 30.7 30.7 42.6 42.6 42.6 ribosomal protein S14 (rpsN) {Shewanella oneidensis MR-1} MW: 11362.20 pI:11.49

SO0245 66.2 59.2 20.0 20.0 66.2 ribosomal protein S8 (rpsH) {Shewanella oneidensis MR-1} MW: 14039.65 pI: 9.52

SO0246 58.8 58.8 50.3 50.3 58.8 ribosomal protein L6 (rplF) {Shewanella oneidensis MR-1} MW: 18923.11 pI: 9.77

SO0247 55.2 44.8 49.1 49.1 58.6 ribosomal protein L18 (rplR) {Shewanella oneidensis MR-1} MW: 12722.70 pI:10.63

SO0248 70.7 67.1 31.7 31.7 74.3 ribosomal protein S5 (rpsE) {Shewanella oneidensis MR-1} MW: 17740.65 pI:10.24

SO0249 61.7 48.3 33.3 23.3 61.7 ribosomal protein L30 (rpmD) {Shewanella oneidensis MR-1} MW: 6682.92 pI:10.20

SO0250 47.2 47.2 59.7 47.2 59.7 ribosomal protein L15 (rplO) {Shewanella oneidensis MR-1} MW: 15080.75 pI:11.39

SO0253 56.8 54.2 41.5 41.5 56.8 ribosomal protein S13 (rpsM) {Shewanella oneidensis MR-1} MW: 13320.76 pI:11.10

SO0254 42.3 42.3 42.3 42.3 42.3 ribosomal protein S11 (rpsK) {Shewanella oneidensis MR-1} MW: 13891.87 pI:11.37

SO0255 54.9 54.4 47.1 50.5 57.8 ribosomal protein S4 (rpsD) {Shewanella oneidensis MR-1} MW: 23436.12 pI:10.12

SO0256 72.0 60.5 29.2 20.7 79.6 DNA-directed RNA polymerase, alpha subunit (rpoA) {Shewanella oneidensis MR-1} MW: 36160.36 pI: 4.77

SO0257 48.9 48.9 48.9 48.9 48.9 ribosomal protein L17 (rplQ) {Shewanella oneidensis MR-1} MW: 14714.01 pI:10.70

SO0404 17.8 16.1 52.3 54.6 56.9 hypothetical protein {Shewanella oneidensis MR-1} MW:128779.24 pI: 5.13

SO0406 78.7 62.0 23.1 23.1 78.7 thioredoxin 1 (trxA) {Shewanella oneidensis MR-1} MW: 11888.78 pI: 4.57

SO0425 16.0 16.8 6.2 7.4 16.8 pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase (aceF) {Shewanella oneidensis MR-1} MW: 69398.86 pI: 4.99

SO0426 37.1 33.5 32.0 29.7 43.2 pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (lpdA) {Shewanella oneidensis MR-1} MW: 50536.63 pI: 5.56

SO0432 37.9 39.7 8.7 11.9 39.7 aconitate hydratase 2 (acnB) {Shewanella oneidensis MR-1} MW: 93393.50 pI: 5.15

SO0608 27.6 27.6 56.6 43.4 56.6 ubiquinol-cytochrome c reductase, iron-sulfur subunit (petA) {Shewanella oneidensis MR-1} MW: 20905.05 pI: 7.70

SO0610 11.7 11.7 31.6 27.3 32.5 ubiquinol-cytochrome c reductase, cytochrome c1 (petC) {Shewanella oneidensis MR-1} MW: 25973.97 pI: 5.87

SO0704 82.8 75.6 69.0 71.9 87.5 chaperonin GroEL (groEL) {Shewanella oneidensis MR-1} MW: 57079.82 pI: 4.84

SO0840 9.2 8.4 30.7 36.1 42.5 acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylase {Shewanella oneidensis MR-1} MW:167623.86 pI: 5.77

SO0842 45.5 40.0 18.8 10.0 47.1 translation elongation factor G (fusA-2) {Shewanella oneidensis MR-1} MW: 76662.73 pI: 4.91

SO0845 16.1 16.1 27.3 21.7 32.9 cytochrome c-type protein NapB (napB) {Shewanella oneidensis MR-1} MW: 15431.74 pI: 8.60

SO0848 18.5 11.7 32.3 34.7 42.5 periplasmic nitrate reductase (napA) {Shewanella oneidensis MR-1} MW: 92474.90 pI: 8.06

SO0933 34.4 28.7 22.8 21.7 34.4 fructose-bisphosphate aldolase, class II, Calvin cycle subtype (fba) {Shewanella oneidensis MR-1} MW: 38511.01 pI: 5.71

SO1017 8.2 8.2 8.2 8.2 8.2 NADH dehydrogenase I, F subunit (nuoF) {Shewanella oneidensis MR-1} MW: 50220.83 pI: 8.00

SO1051 11.6 6.0 12.6 15.4 17.9 periplasmic glucan biosynthesis protein, putative {Shewanella oneidensis MR-1} MW: 67751.17 pI: 5.89

SO1065 16.9 23.1 49.4 47.1 67.1 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA (fkpA) {Shewanella oneidensis MR-1} MW: 27701.55 pI: 5.07

SO1126 68.9 71.8 54.1 42.1 76.7 chaperone protein DnaK (dnaK) {Shewanella oneidensis MR-1} MW: 68861.79 pI: 4.77

SO1127 25.4 25.9 26.5 17.7 43.9 chaperone protein DnaJ (dnaJ) {Shewanella oneidensis MR-1} MW: 40763.24 pI: 8.67

SO1197 6.2 5.9 31.3 35.4 38.1 cell division protein FtsH (ftsH) {Shewanella oneidensis MR-1} MW: 71227.64 pI: 5.32

SO1203 44.7 36.5 13.2 8.6 45.9 N utilization substance protein A (nusA) {Shewanella oneidensis MR-1} MW: 55273.55 pI: 4.49

SO1204 36.2 34.9 7.3 12.8 44.4 translation initiation factor IF-2 (infB) {Shewanella oneidensis MR-1} MW: 96113.50 pI: 5.93

SO1207 58.4 28.1 46.1 51.7 58.4 ribosomal protein S15 (rpsO) {Shewanella oneidensis MR-1} MW: 10215.85 pI:10.41

SO1209 35.6 34.8 17.2 16.7 40.3 polyribonucleotide nucleotidyltransferase (pnp) {Shewanella oneidensis MR-1} MW: 75832.00 pI: 5.11

SO1284 22.7 21.8 10.4 10.2 26.9 RNA polymerase sigma-70 factor (rpoD) {Shewanella oneidensis MR-1} MW: 70392.63 pI: 4.70

SO1288 39.4 39.4 43.7 42.3 43.7 ribosomal protein S21 (rpsU) {Shewanella oneidensis MR-1} MW: 8344.85 pI:11.18

SO1356 23.0 21.2 39.2 30.6 39.2 signal recognition particle protein Ffh (ffh) {Shewanella oneidensis MR-1} MW: 49912.72 pI: 9.58

SO1360 47.9 52.1 29.1 37.6 62.4 ribosomal protein L19 (rplS) {Shewanella oneidensis MR-1} MW: 13292.44 pI:10.78

SO1521 12.8 15.6 40.4 39.1 43.4 iron-sulfur cluster-binding protein {Shewanella oneidensis MR-1} MW:102163.74 pI: 6.60

SO1524 70.4 65.5 37.4 40.8 70.4 heat shock protein GrpE (grpE) {Shewanella oneidensis MR-1} MW: 22702.59 pI: 4.47

SO1629 43.0 37.6 46.3 46.3 50.4 ribosomal protein S2 (rpsB) {Shewanella oneidensis MR-1} MW: 26569.59 pI: 7.85

SO1630 52.3 49.8 15.2 21.2 57.6 translation elongation factor Ts (tsf) {Shewanella oneidensis MR-1} MW: 30413.95 pI: 5.31

SO1677 49.7 43.7 10.9 16.2 49.7 acetyl-CoA acetyltransferase (atoB) {Shewanella oneidensis MR-1} MW: 40673.17 pI: 5.85

SO1793 63.6 56.0 27.9 27.4 63.6 trigger factor (tig) {Shewanella oneidensis MR-1} MW: 47596.48 pI: 4.87

SO1798 17.9 20.1 76.8 74.6 77.1 peptidyl-prolyl cis-trans isomerase D (ppiD) {Shewanella oneidensis MR-1} MW: 67497.48 pI: 4.89

SO1807 30.8 29.5 69.2 46.3 69.2 phage shock protein A (pspA) {Shewanella oneidensis MR-1} MW: 25575.26 pI: 5.32

SO1824 60.2 66.1 82.4 82.4 86.4 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 24958.30 pI: 4.83

SO1825 14.6 7.3 58.3 55.7 60.5 MotA/TolQ/ExbB proton channel family protein {Shewanella oneidensis MR-1} MW: 48770.77 pI: 6.52

SO1928 7.7 6.1 42.0 37.4 42.0 succinate dehydrogenase, flavoprotein subunit (sdhA) {Shewanella oneidensis MR-1} MW: 64229.02 pI: 5.81

SO1929 15.3 9.8 38.3 37.4 43.8 succinate dehydrogenase, iron-sulfur protein (sdhB) {Shewanella oneidensis MR-1} MW: 26623.04 pI: 6.93

SO1930 15.2 9.9 6.3 7.1 18.2 2-oxoglutarate dehydrogenase, E1 component (sucA) {Shewanella oneidensis MR-1} MW:104864.85 pI: 6.01

SO1931 36.7 36.7 31.6 34.4 36.7 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase (sucB) {Shewanella oneidensis MR-1} MW: 42831.36 pI: 5.60

SO1932 52.3 50.0 16.2 14.7 52.3 succinyl-CoA synthase, beta subunit (sucC) {Shewanella oneidensis MR-1} MW: 41361.89 pI: 5.18

SO1933 32.4 32.4 7.9 9.0 32.4 succinyl-CoA synthase, alpha subunit (sucD) {Shewanella oneidensis MR-1} MW: 29707.51 pI: 5.70

SO2001 16.0 7.6 45.5 47.1 48.5 5-nucleotidase (ushA) {Shewanella oneidensis MR-1} MW: 60992.14 pI: 5.06

SO2014 41.3 34.9 32.1 32.1 41.3 conserved hypothetical protein TIGR00103 {Shewanella oneidensis MR-1} MW: 12001.25 pI: 5.19

SO2016 42.9 39.2 8.9 5.8 45.1 heat shock protein HtpG (htpG) {Shewanella oneidensis MR-1} MW: 71767.43 pI: 5.25

SO2300 59.4 59.4 35.7 24.5 60.8 translation initiation factor IF-3 (infC) {Shewanella oneidensis MR-1} MW: 16468.18 pI: 9.28

SO2302 52.5 33.9 22.9 29.7 53.4 ribosomal protein L20 (rplT) {Shewanella oneidensis MR-1} MW: 13566.96 pI:11.34

SO2339 29.8 26.5 33.4 39.3 45.9 alpha keto acid dehydrogenase complex, E1 component, alpha subunit {Shewanella oneidensis MR-1} MW: 43555.89 pI: 6.39

SO2340 20.0 20.0 32.6 29.2 32.6 alpha keto acid dehydrogenase complex, E1 component, beta subunit {Shewanella oneidensis MR-1} MW: 35372.43 pI: 5.13

SO2341 14.0 25.0 31.0 30.7 32.7 alpha keto acid dehydrogenase complex, E2 component {Shewanella oneidensis MR-1} MW: 57320.24 pI: 5.32

SO2347 35.2 28.3 13.2 12.8 35.2 glyceraldehyde 3-phosphate dehydrogenase (gapA-3) {Shewanella oneidensis MR-1} MW: 52288.85 pI: 6.40

SO2363 10.6 10.6 28.4 38.0 38.0 cytochrome c oxidase, cbb3-type, subunit II (ccoO) {Shewanella oneidensis MR-1} MW: 23430.91 pI: 6.24

SO2402 55.1 50.8 32.8 20.7 55.7 ribosomal protein S1 (rpsA) {Shewanella oneidensis MR-1} MW: 61262.43 pI: 4.91

SO2415 12.9 8.9 3.9 4.6 16.7 ribonucleoside-diphosphate reductase, alpha subunit (nrdA) {Shewanella oneidensis MR-1} MW: 85712.20 pI: 6.14

SO2427 7.4 7.4 33.3 31.9 33.9 TonB-dependent receptor, putative {Shewanella oneidensis MR-1} MW: 91958.40 pI: 4.38

SO2592 10.3 13.3 33.3 33.0 36.0 dihydroorotate dehydrogenase (pyrD) {Shewanella oneidensis MR-1} MW: 36582.66 pI: 8.61

SO2593 18.0 13.9 6.3 7.8 20.5 conserved hypothetical protein {Shewanella oneidensis MR-1} MW:182333.90 pI: 5.91

SO2637 18.0 18.0 18.0 18.0 18.0 hypothetical protein {Shewanella oneidensis MR-1} MW: 17500.06 pI: 9.39

SO2749 7.5 7.5 21.2 21.2 21.2 tolA protein (tolA) {Shewanella oneidensis MR-1} MW: 37734.89 pI: 8.97

SO2756 57.2 57.2 21.9 32.3 57.2 antioxidant, AhpC/Tsa family, authentic frameshift {Shewanella oneidensis MR-1} MW: 21840.94 pI: 5.19

SO2785 20.6 19.5 21.5 22.1 26.8 ribonuclease E (rne) {Shewanella oneidensis MR-1} MW:120494.07 pI: 5.56

SO2787 100.0 100.0 63.8 78.3 100.0 cold shock domain family protein {Shewanella oneidensis MR-1} MW: 7523.42 pI: 5.08

SO2903 41.6 47.5 30.1 38.8 47.5 cysteine synthase A (cysK) {Shewanella oneidensis MR-1} MW: 34420.67 pI: 5.80

SO2907 4.9 7.2 40.6 44.8 46.7 TonB-dependent receptor domain protein {Shewanella oneidensis MR-1} MW: 95761.02 pI: 4.54

SO2929 12.1 12.1 36.9 44.5 48.5 hypothetical protein {Shewanella oneidensis MR-1} MW: 40937.71 pI: 8.18

SO3090 11.4 11.4 11.4 15.8 15.8 MoxR domain protein {Shewanella oneidensis MR-1} MW: 35336.68 pI: 5.25

SO3193 7.4 3.7 21.4 31.5 34.0 polysaccharide biosynthesis protein {Shewanella oneidensis MR-1} MW:100375.80 pI: 5.65

SO3207 10.8 8.4 8.4 8.4 13.2 chemotaxis protein {Shewanella oneidensis MR-1} MW: 80821.75 pI: 4.75

SO3237 26.8 18.8 43.4 51.8 54.4 flagellin {Shewanella oneidensis MR-1} MW: 28467.97 pI: 7.90

SO3238 33.0 33.0 51.3 48.7 51.3 flagellin {Shewanella oneidensis MR-1} MW: 28674.21 pI: 7.94

SO3247 3.3 3.3 7.3 6.8 10.8 flagellar hook protein FlgE (flgE) {Shewanella oneidensis MR-1} MW: 47179.92 pI: 4.54

SO3293 64.3 55.1 28.7 15.4 66.4 inosine-5-monophosphate dehydrogenase (guaB) {Shewanella oneidensis MR-1} MW: 51684.67 pI: 6.45

SO3310 47.6 37.4 75.7 65.5 75.7 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 22275.32 pI: 4.87

SO3417 22.5 30.6 22.5 22.5 30.6 peptidyl-prolyl cis-trans isomerase SlyD (slyD) {Shewanella oneidensis MR-1} MW: 23490.85 pI: 5.01

SO3430 45.9 42.6 38.7 42.0 51.0 recA protein (recA) {Shewanella oneidensis MR-1} MW: 38072.71 pI: 5.13

SO3466 34.8 34.8 44.3 44.3 44.3 riboflavin synthase, beta subunit (ribH) {Shewanella oneidensis MR-1} MW: 16689.33 pI: 5.03

SO3483 9.5 9.5 14.4 14.4 21.4 HlyD family secretion protein {Shewanella oneidensis MR-1} MW: 39820.12 pI: 6.62

SO3537 22.7 17.0 22.7 22.7 22.7 ribosomal protein S20 (rpsT) {Shewanella oneidensis MR-1} MW: 9757.50 pI:11.86

SO3545 14.1 14.1 49.5 44.3 51.4 OmpA family protein {Shewanella oneidensis MR-1} MW: 40181.61 pI: 4.76

SO3637 13.1 14.5 12.9 10.6 22.8 survival protein surA (surA) {Shewanella oneidensis MR-1} MW: 48913.96 pI: 5.67

SO3652 61.2 51.5 50.5 29.1 61.2 ribosomal protein L21 (rplU) {Shewanella oneidensis MR-1} MW: 11345.22 pI:10.07

SO3733 11.6 9.5 23.7 25.6 26.8 hypothetical protein {Shewanella oneidensis MR-1} MW: 62799.39 pI: 4.92

SO3748 18.8 17.1 18.8 23.0 23.0 LysM domain protein {Shewanella oneidensis MR-1} MW: 33564.15 pI: 9.23

SO3765 31.4 28.8 63.8 62.9 63.8 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 25389.56 pI: 6.38

SO3772 40.1 37.4 65.4 66.5 66.5 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 20154.98 pI: 5.77

SO3774 20.1 17.9 18.0 14.6 23.5 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase, putative {Shewanella oneidensis MR-1} MW:115071.97 pI: 5.90

SO3811 20.2 20.2 47.9 47.9 47.9 lipoprotein, putative {Shewanella oneidensis MR-1} MW: 21120.34 pI: 6.75

SO3844 9.4 5.6 47.8 46.1 48.4 peptidase, M13 family {Shewanella oneidensis MR-1} MW: 77206.40 pI: 5.52

SO3896 36.3 41.2 72.9 75.3 78.6 outer membrane porin, putative {Shewanella oneidensis MR-1} MW: 39898.07 pI: 4.70

SO3904 10.3 11.7 54.3 53.8 58.2 outer membrane protein TolC (tolC) {Shewanella oneidensis MR-1} MW: 47677.48 pI: 5.38

SO3927 76.7 64.0 37.3 44.0 76.7 ribosomal protein L9 (rplI) {Shewanella oneidensis MR-1} MW: 15662.03 pI: 5.51

SO3928 57.3 50.7 50.7 50.7 57.3 ribosomal protein S18 (rpsR) {Shewanella oneidensis MR-1} MW: 8845.31 pI:10.28

SO3930 63.4 68.7 50.4 50.4 68.7 ribosomal protein S6 (rpsF) {Shewanella oneidensis MR-1} MW: 15002.83 pI: 5.26

SO3939 51.5 51.5 34.6 46.2 51.5 ribosomal protein S9 (rpsI) {Shewanella oneidensis MR-1} MW: 14535.92 pI:11.39

SO3940 47.2 57.7 26.1 12.7 57.7 ribosomal protein L13 (rplM) {Shewanella oneidensis MR-1} MW: 15743.31 pI: 9.63

SO3942 31.3 26.0 25.3 21.8 33.8 serine protease, HtrA/DegQ/DegS family {Shewanella oneidensis MR-1} MW: 46550.63 pI: 5.95

SO4034 28.7 26.8 14.0 11.4 30.7 ATP-dependent RNA helicase DeaD (deaD) {Shewanella oneidensis MR-1} MW: 69382.27 pI: 8.95

SO4098 17.5 14.6 9.2 10.6 17.5 rod shape-determining protein MreB (mreB) {Shewanella oneidensis MR-1} MW: 37272.82 pI: 4.97

SO4105 60.2 45.6 60.2 49.7 60.2 MSHA pilin protein MshA (mshA) {Shewanella oneidensis MR-1} MW: 17656.36 pI: 5.75

SO4163 13.9 16.6 22.5 21.8 32.3 heat shock protein HslVU, ATPase subunit HslU (hslU) {Shewanella oneidensis MR-1} MW: 49800.28 pI: 5.29

SO4199 19.5 10.8 21.9 16.3 25.1 ubiquinone/menaquinone biosynthesis methlytransferase UbiE (ubiE) {Shewanella oneidensis MR-1} MW: 28065.31 pI: 7.11

SO4211 10.4 12.9 37.0 41.1 45.0 preprotein translocase, SecA subunit (secA) {Shewanella oneidensis MR-1} MW:102623.24 pI: 5.26

SO4320 14.6 17.8 27.2 28.9 32.1 agglutination protein (aggA) {Shewanella oneidensis MR-1} MW: 52343.46 pI: 5.17

SO4384 23.9 23.9 19.4 23.9 23.9 hypothetical protein {Shewanella oneidensis MR-1} MW: 27872.79 pI: 8.86

SO4586 16.1 17.3 31.6 37.5 43.9 cell division protein FtsY (ftsY) {Shewanella oneidensis MR-1} MW: 55476.91 pI: 4.93

SO4747 51.0 47.9 83.4 79.5 83.4 ATP synthase F1, beta subunit (atpD) {Shewanella oneidensis MR-1} MW: 49773.89 pI: 4.88

SO4748 40.6 34.3 70.3 63.3 70.3 ATP synthase F1, gamma subunit (atpG) {Shewanella oneidensis MR-1} MW: 31515.32 pI: 7.68

SO4749 42.3 33.7 66.9 70.8 70.8 ATP synthase F1, alpha subunit (atpA) {Shewanella oneidensis MR-1} MW: 55148.27 pI: 5.38

SO4751 23.1 21.8 67.3 67.3 67.3 ATP synthase F0, B subunit (atpF) {Shewanella oneidensis MR-1} MW: 17369.15 pI: 5.97

contam_gi|136429|sp|P00761|TRYP_PIG 23.8 27.3 23.8 23.8 27.3 Trypsin precursor MW: 24409.68 pI: 7.00

148 X X X X

Locus control_crude_run1
2pep_def control_crude_run2
2pep_def control_memb_run1
2pep_def control_memb_run2
2pep_def Total Description

SO0429 7.2 42.1 46.2 46.2 peptidase, M13 family {Shewanella oneidensis MR-1} MW: 76198.24 pI: 5.46

SO1103 5.6 41.9 37.4 47.7 NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit (nqrA-2) {Shewanella oneidensis MR-1} MW: 47801.23 pI: 6.03

SO4202 33.0 54.5 43.2 54.5 Sec-independent protein translocase protein TatA (tatA) {Shewanella oneidensis MR-1} MW: 9338.81 pI: 7.99

SO4693 8.1 40.6 55.2 55.2 multidrug resistance protein, AcrA/AcrE family {Shewanella oneidensis MR-1} MW: 40186.35 pI: 9.07

4 X X X

Locus control_crude_run1
2pep_def control_crude_run2
2pep_def control_memb_run1
2pep_def control_memb_run2
2pep_def Total Description

SO1518 6.9 24.9 34.4 34.4 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 20071.25 pI: 5.39

SO1829 5.3 61.2 58.1 63.1 TPR domain protein {Shewanella oneidensis MR-1} MW: 46436.51 pI: 8.77

SO1854 5.9 27.5 31.5 35.1 hypothetical protein {Shewanella oneidensis MR-1} MW: 66401.82 pI: 4.86

SO2361 17.7 44.1 45.3 45.3 cytochrome c oxidase, cbb3-type, subunit III (ccoP) {Shewanella oneidensis MR-1} MW: 35018.30 pI: 5.92

SO2796 3.2 36.1 32.4 36.1 conserved hypothetical protein {Shewanella oneidensis MR-1} MW:117081.16 pI: 5.85

SO2938 16.7 16.7 16.7 16.7 hypothetical protein {Shewanella oneidensis MR-1} MW: 19241.98 pI: 4.69

SO3099 10.5 28.6 33.0 33.0 long-chain fatty acid transport protein, putative {Shewanella oneidensis MR-1} MW: 47063.51 pI: 4.53

SO3404 3.3 3.3 3.3 3.3 methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 57432.99 pI: 6.58

SO4106 21.5 60.0 63.9 63.9 MSHA pilin protein MshB (mshB) {Shewanella oneidensis MR-1} MW: 21273.92 pI: 4.78

SO4329 39.3 41.7 41.7 41.7 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 9739.28 pI: 5.47

SO4509 4.5 20.7 25.0 27.7 formate dehydrogenase, alpha subunit {Shewanella oneidensis MR-1} MW:105856.46 pI: 6.77

SO4679 26.0 18.8 18.8 26.0 glycosyl transferase, group 1 family protein {Shewanella oneidensis MR-1} MW: 40136.79 pI: 8.95

SO4681 5.9 7.4 5.9 7.4 glycosyl transferase, group 1 family protein {Shewanella oneidensis MR-1} MW: 45659.22 pI: 8.17

13 X X X

Locus control_crude_run1
2pep_def control_crude_run2
2pep_def control_memb_run1
2pep_def control_memb_run2
2pep_def Total Description

SO0235 20.7 8.7 20.7 20.7 ribosomal protein S19 (rpsS) {Shewanella oneidensis MR-1} MW: 10472.50 pI:10.52

SO0424 42.6 35.4 5.4 45.5 pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (aceE) {Shewanella oneidensis MR-1} MW: 99387.91 pI: 5.39

SO1139 25.9 26.3 13.2 26.3 peptidyl-prolyl cis-trans isomerase FklB (fklB) {Shewanella oneidensis MR-1} MW: 21868.46 pI: 4.45

SO1142 23.8 24.6 4.5 27.7 carbamoyl-phosphate synthase, large subunit (carB) {Shewanella oneidensis MR-1} MW:117982.45 pI: 5.04

SO1690 12.6 11.1 9.2 12.6 ABC transporter, ATP-binding protein {Shewanella oneidensis MR-1} MW: 59607.00 pI: 4.94

SO1797 58.9 58.9 26.7 58.9 DNA-binding protein, HU family {Shewanella oneidensis MR-1} MW: 9445.80 pI: 9.05

SO2644 34.7 35.6 6.2 39.2 phosphoenolpyruvate synthase (ppsA) {Shewanella oneidensis MR-1} MW: 86776.93 pI: 4.99

SO2916 12.4 7.4 5.3 12.4 phosphate acetyltransferase (pta) {Shewanella oneidensis MR-1} MW: 77852.59 pI: 5.59

SO3428 18.0 16.8 4.3 23.7 alanyl-tRNA synthetase (alaS) {Shewanella oneidensis MR-1} MW: 94893.38 pI: 5.46

SO3440 30.7 30.9 9.3 33.9 enolase (eno) {Shewanella oneidensis MR-1} MW: 42150.91 pI: 4.99

SO3472 21.4 24.1 5.6 33.5 ABC transporter, ATP-binding protein {Shewanella oneidensis MR-1} MW: 62175.69 pI: 5.16

SO3934 22.8 22.8 9.3 22.8 RNA methyltransferase, TrmH family, group 3 {Shewanella oneidensis MR-1} MW: 26535.98 pI: 7.00

SO4215 13.4 13.4 9.1 13.4 cell division protein FtsZ (ftsZ) {Shewanella oneidensis MR-1} MW: 40935.73 pI: 4.82

SO4410 21.1 18.8 14.7 21.1 glutamine synthetase, type I (glnA) {Shewanella oneidensis MR-1} MW: 51773.51 pI: 5.12

SO4719 63.9 65.0 12.8 66.8 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 29366.81 pI: 6.46

15 X X X

Locus control_crude_run1
2pep_def control_crude_run2
2pep_def control_memb_run1
2pep_def control_memb_run2
2pep_def Total Description

SO0219 37.7 37.7 7.7 41.5 transcription antitermination protein NusG (nusG) {Shewanella oneidensis MR-1} MW: 20902.91 pI: 5.74

SO0226 26.6 21.0 8.9 26.6 ribosomal protein S12 (rpsL) {Shewanella oneidensis MR-1} MW: 13649.88 pI:11.18

SO0240 17.1 17.1 34.1 51.2 ribosomal protein S17 (rpsQ) {Shewanella oneidensis MR-1} MW: 9351.89 pI: 9.74

SO0335 54.8 71.2 16.4 71.2 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 8401.67 pI: 4.40

SO0405 43.7 38.2 8.3 43.7 transcription termination factor Rho (rho) {Shewanella oneidensis MR-1} MW: 47161.51 pI: 7.76

SO0407 11.4 5.9 13.0 13.0 ATP-dependent RNA helicase, DEAD box family {Shewanella oneidensis MR-1} MW: 49262.52 pI: 6.96

SO0770 84.6 76.2 11.9 84.6 malate dehydrogenase (mdh) {Shewanella oneidensis MR-1} MW: 32137.43 pI: 5.37

SO1357 35.4 28.0 17.1 35.4 ribosomal protein S16 (rpsP) {Shewanella oneidensis MR-1} MW: 9108.48 pI:10.85

SO1631 26.4 35.5 16.9 35.5 uridylate kinase (pyrH) {Shewanella oneidensis MR-1} MW: 26252.78 pI: 5.53

SO1726 12.3 12.3 12.3 12.3 phosphate transport system regulatory protein PhoU (phoU) {Shewanella oneidensis MR-1} MW: 26820.05 pI: 5.37

SO2490 27.8 23.2 15.5 31.0 transcriptional regulator, RpiR family {Shewanella oneidensis MR-1} MW: 31389.14 pI: 8.32

SO3190 26.5 19.7 6.3 26.5 polysaccharide biosynthesis protein {Shewanella oneidensis MR-1} MW: 47233.71 pI: 5.53

12 X X X

Locus control_crude_run1
2pep_def control_crude_run2
2pep_def control_memb_run1
2pep_def control_memb_run2
2pep_def Total Description

SO0004 10.7 12.2 12.2 inner membrane protein, 60 kDa {Shewanella oneidensis MR-1} MW: 60451.74 pI: 6.67

SO0029 6.4 10.0 10.0 potassium uptake protein TrkA (trkA) {Shewanella oneidensis MR-1} MW: 51354.14 pI: 5.25

SO0050 17.4 17.4 17.4 rhodanese domain protein {Shewanella oneidensis MR-1} MW: 15945.68 pI: 9.59

SO0075 6.5 4.8 11.3 AMP-binding family protein {Shewanella oneidensis MR-1} MW: 63531.67 pI: 7.60

SO0135 58.3 47.9 58.3 hemolysin protein, putative {Shewanella oneidensis MR-1} MW: 10360.58 pI: 4.91

SO0167 11.7 9.2 11.7 general secretion pathway protein E (gspE) {Shewanella oneidensis MR-1} MW: 57660.28 pI: 5.32

SO0169 48.6 48.6 48.6 general secretion pathway protein G (gspG) {Shewanella oneidensis MR-1} MW: 16161.54 pI: 4.84

SO0174 16.7 11.9 16.7 general secretion pathway protein L (gspL) {Shewanella oneidensis MR-1} MW: 43450.47 pI: 6.35

SO0208 17.5 23.4 23.4 RNA-binding protein {Shewanella oneidensis MR-1} MW: 16947.61 pI: 7.93

SO0259 9.9 9.9 9.9 cytochrome c biogenesis protein CcmE (ccmE) {Shewanella oneidensis MR-1} MW: 17357.94 pI: 5.78

SO0263 18.5 13.4 18.5 heme exporter protein CcmA (ccmA) {Shewanella oneidensis MR-1} MW: 24372.79 pI: 5.08

SO0265 28.0 33.3 34.0 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 45262.12 pI: 5.20

SO0266 7.4 5.5 7.4 cytochrome c-type biogenesis protein CcmF (ccmF-1) {Shewanella oneidensis MR-1} MW: 72256.61 pI: 9.46

SO0267 33.7 33.7 33.7 thiol:disulfide interchange protein DsbE (dsbE) {Shewanella oneidensis MR-1} MW: 21084.77 pI: 6.74

SO0280 5.4 12.2 12.2 penicillin-binding protein 1A (mrcA) {Shewanella oneidensis MR-1} MW: 92284.13 pI: 6.84

SO0288 15.3 15.3 15.3 damX domain protein {Shewanella oneidensis MR-1} MW: 51963.70 pI: 5.06

SO0300 10.8 4.7 12.4 lipoprotein, putative {Shewanella oneidensis MR-1} MW: 68247.82 pI: 7.13

SO0347 14.9 14.9 14.9 acyltransferase family protein {Shewanella oneidensis MR-1} MW: 34418.34 pI: 9.28

SO0348 28.7 18.3 28.7 acyltransferase family protein {Shewanella oneidensis MR-1} MW: 34567.81 pI: 9.56

SO0362 15.9 16.3 19.8 hypothetical protein {Shewanella oneidensis MR-1} MW: 56124.69 pI: 6.13

SO0417 29.0 29.0 29.0 pilin, putative {Shewanella oneidensis MR-1} MW: 13894.02 pI: 5.29

SO0428 5.0 5.0 5.0 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 81125.24 pI: 4.89

SO0491 34.9 34.7 37.1 peptidase, M13 family {Shewanella oneidensis MR-1} MW: 76884.30 pI: 5.14

SO0501 28.9 32.6 39.0 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 24343.30 pI: 8.84

SO0520 3.6 6.2 6.2 heavy metal efflux pump, CzcA family {Shewanella oneidensis MR-1} MW:114964.02 pI: 5.01

SO0605 37.8 47.2 50.1 hflK protein (hflK) {Shewanella oneidensis MR-1} MW: 42653.10 pI: 5.24

SO0606 52.5 60.6 63.3 hflC protein (hflC) {Shewanella oneidensis MR-1} MW: 33205.04 pI: 9.15

SO0609 2.2 4.5 4.5 ubiquinol-cytochrome c reductase, cytochrome b (petB) {Shewanella oneidensis MR-1} MW: 45895.63 pI: 8.80

SO0633 12.5 10.4 15.0 penicillin-binding protein 1B (mrcB) {Shewanella oneidensis MR-1} MW: 84798.47 pI: 9.33

SO0695 5.9 5.9 8.6 glutathione-regulated potassium-efflux system protein KefC, putative {Shewanella oneidensis MR-1} MW: 59541.22 pI: 6.88

SO0719 11.1 9.1 12.6 TonB-dependent receptor, putative {Shewanella oneidensis MR-1} MW: 84129.65 pI: 4.57

SO0815 8.7 11.6 11.6 TonB-dependent receptor C-terminal domain protein {Shewanella oneidensis MR-1} MW: 71557.92 pI: 4.76

SO0919 4.9 4.9 4.9 serine transporter, putative {Shewanella oneidensis MR-1} MW: 46891.37 pI: 9.36

SO0923 44.9 44.9 44.9 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 14932.30 pI: 6.06

SO0987 5.4 3.8 7.4 methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 60033.44 pI: 5.03

SO1004 9.5 13.8 13.8 hypothetical protein {Shewanella oneidensis MR-1} MW: 80057.83 pI: 5.26

SO1019 7.2 5.3 7.2 NADH dehydrogenase I, C/D subunits (nuoCD) {Shewanella oneidensis MR-1} MW: 68855.98 pI: 6.12

SO1056 17.0 7.9 17.0 methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 68576.67 pI: 5.03

SO1060 12.2 18.3 21.3 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 22099.58 pI: 7.73

SO1105 23.3 18.7 23.3 NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit (nqrC-2) {Shewanella oneidensis MR-1} MW: 28414.57 pI: 6.97

SO1108 25.1 27.3 29.7 NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (nqrF-2) {Shewanella oneidensis MR-1} MW: 46090.04 pI: 5.02

SO1109 16.1 27.4 27.4 thiamin biosynthesis lipoprotein ApbE (apbE) {Shewanella oneidensis MR-1} MW: 38216.14 pI: 6.02

SO1144 2.8 9.4 9.4 methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 40296.38 pI: 6.09

SO1164 44.1 43.6 50.0 D-alanyl-D-alanine carboxypeptidase (dacA-1) {Shewanella oneidensis MR-1} MW: 43109.00 pI: 5.72

SO1201 23.4 23.4 23.4 preprotein translocase, SecG subunit (secG) {Shewanella oneidensis MR-1} MW: 11561.28 pI: 4.75

SO1222 9.6 12.5 12.5 hypothetical protein {Shewanella oneidensis MR-1} MW: 45216.37 pI: 5.73

SO1295 26.1 23.9 36.4 major outer membrane lipoprotein, putative {Shewanella oneidensis MR-1} MW: 9183.51 pI: 8.79

SO1347 23.9 25.6 28.2 signal peptidase I (lepB) {Shewanella oneidensis MR-1} MW: 34474.09 pI: 5.31

SO1369 5.9 10.8 10.8 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 41175.15 pI: 9.08

SO1377 24.2 29.2 29.2 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 65642.59 pI: 5.13

SO1385 3.1 4.6 5.8 methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 57341.80 pI: 6.37

SO1475 30.6 30.6 30.6 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 12363.31 pI: 9.39

SO1476 20.2 20.2 20.2 small protein A (smpA) {Shewanella oneidensis MR-1} MW: 18644.40 pI: 5.93

SO1482 7.5 10.3 14.7 TonB-dependent receptor, putative {Shewanella oneidensis MR-1} MW: 90370.42 pI: 4.81

SO1519 18.3 20.5 20.7 iron-sulfur cluster-binding protein {Shewanella oneidensis MR-1} MW: 51432.69 pI: 8.89

SO1539 7.4 7.6 11.2 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 59732.34 pI: 5.72

SO1568 18.4 18.4 18.4 hypothetical protein {Shewanella oneidensis MR-1} MW: 19485.84 pI: 4.80

SO1637 17.2 22.0 27.6 bacterial surface antigen {Shewanella oneidensis MR-1} MW: 92517.68 pI: 4.94

SO1675 26.4 34.4 34.4 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 13670.11 pI: 5.64

SO1725 24.2 20.1 24.2 phosphate ABC transporter, ATP-binding protein (pstB-1) {Shewanella oneidensis MR-1} MW: 29824.22 pI: 6.13

SO1750 30.5 40.8 45.5 ABC transporter, ATP-binding protein {Shewanella oneidensis MR-1} MW: 31655.53 pI: 5.91

SO1776 4.4 11.8 11.8 outer membrane protein precursor MtrB (mtrB) {Shewanella oneidensis MR-1} MW: 77677.53 pI: 4.62

SO1778 30.8 25.3 30.8 decaheme cytochrome c (omcB) {Shewanella oneidensis MR-1} MW: 71236.89 pI: 5.68

SO1779 14.3 12.1 22.7 decaheme cytochrome c (omcA) {Shewanella oneidensis MR-1} MW: 78616.62 pI: 6.36

SO1784 18.2 16.1 22.9 ferrous iron transport protein B (feoB) {Shewanella oneidensis MR-1} MW: 81848.79 pI: 5.75

SO1808 45.6 45.6 45.6 phage shock protein B (pspB) {Shewanella oneidensis MR-1} MW: 9153.71 pI: 5.02

SO1821 14.1 18.6 18.6 outer membrane porin, putative {Shewanella oneidensis MR-1} MW: 43883.65 pI: 4.50

SO1827 53.7 40.3 53.7 TonB system transport protein ExbD2 (exbD2) {Shewanella oneidensis MR-1} MW: 14610.98 pI: 5.67

SO1828 28.0 24.2 28.0 TonB2 protein (tonB2) {Shewanella oneidensis MR-1} MW: 22367.79 pI: 6.63

SO1831 13.3 10.0 14.6 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 68456.00 pI: 5.24

SO1865 8.9 8.9 8.9 ABC transporter, ATP-binding protein {Shewanella oneidensis MR-1} MW: 32653.89 pI: 6.31

SO1880 27.1 36.7 36.7 lipoprotein-34 NlpB (nlpB) {Shewanella oneidensis MR-1} MW: 41641.29 pI: 4.98

SO1948 6.9 6.9 6.9 sodium:dicarboxylate symporter family protein {Shewanella oneidensis MR-1} MW: 46799.98 pI: 5.89

SO1949 9.8 5.7 9.8 invasin domain protein {Shewanella oneidensis MR-1} MW:126523.87 pI: 4.53

SO1994 18.5 13.4 18.5 membrane-bound lytic transglycolase-related protein {Shewanella oneidensis MR-1} MW: 47845.23 pI: 8.20

SO2062 34.5 34.5 34.5 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 12713.92 pI: 9.86

SO2088 14.4 18.3 18.3 lipid A biosynthesis acyltransferase, putative {Shewanella oneidensis MR-1} MW: 35114.52 pI: 9.76

SO2108 8.1 5.9 8.1 periplasmic glucans biosynthesis protein MdoH (mdoH) {Shewanella oneidensis MR-1} MW: 81034.33 pI: 8.74

SO2240 18.7 22.2 22.4 methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 59322.35 pI: 4.90

SO2254 16.6 11.4 23.2 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 36461.29 pI: 5.98

SO2262 28.2 28.2 31.9 serine acetyltransferase (cysE) {Shewanella oneidensis MR-1} MW: 29861.20 pI: 6.59

SO2420 11.7 15.6 15.6 signal peptide peptidase SppA, 67K type (sppA) {Shewanella oneidensis MR-1} MW: 67004.67 pI: 5.09

SO2492 14.4 15.5 19.8 oxidoreductase, acyl-CoA dehydrogenase family {Shewanella oneidensis MR-1} MW: 83426.90 pI: 6.65

SO2510 7.2 18.1 20.0 iron-sulfur cluster-binding protein {Shewanella oneidensis MR-1} MW: 83125.65 pI: 6.30

SO2536 24.0 22.1 28.1 oxidoreductase, acyl-CoA dehydrogenase family {Shewanella oneidensis MR-1} MW: 89393.80 pI: 6.93

SO2606 11.2 9.8 11.2 PqiB family protein {Shewanella oneidensis MR-1} MW: 93274.87 pI: 6.77

SO2643 14.0 16.0 18.0 oxidoreductase, FAD-binding, putative {Shewanella oneidensis MR-1} MW:111596.60 pI: 7.99

SO2747 45.8 40.1 45.8 peptidoglycan-associated lipoprotein (pal) {Shewanella oneidensis MR-1} MW: 19386.88 pI: 4.95

SO2766 10.3 22.6 22.6 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 57236.91 pI: 4.98

SO2802 11.1 10.3 13.3 ABC transporter, ATP-binding protein MsbA (msbA) {Shewanella oneidensis MR-1} MW: 65712.37 pI: 6.69

SO2878 20.6 20.6 20.6 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 39537.50 pI: 5.32

SO2897 24.7 27.0 30.5 cell division protein ZipA (zipA) {Shewanella oneidensis MR-1} MW: 38231.28 pI: 5.21

SO2991 24.3 37.9 37.9 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 14584.74 pI: 6.71

SO3033 6.9 4.0 6.9 ferric alcaligin siderophore receptor {Shewanella oneidensis MR-1} MW: 77996.10 pI: 4.74

SO3066 8.9 10.3 15.3 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 30371.68 pI: 8.42

SO3094 6.9 6.2 8.4 TPR domain protein {Shewanella oneidensis MR-1} MW: 75068.62 pI: 4.92

SO3101 29.8 29.8 29.8 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 26777.70 pI: 7.68

SO3110 15.9 11.7 17.5 protein-export membrane protein SecF (secF-2) {Shewanella oneidensis MR-1} MW: 34095.27 pI: 5.34

SO3111 37.8 36.7 39.4 protein-export membrane protein SecD (secD-2) {Shewanella oneidensis MR-1} MW: 66493.56 pI: 6.61

SO3112 28.2 28.2 28.2 preprotein translocase, YajC subunit (yajC) {Shewanella oneidensis MR-1} MW: 11992.14 pI: 8.93

SO3122 3.7 6.1 6.1 sodium/dicarboxylate symporter {Shewanella oneidensis MR-1} MW: 42173.39 pI: 7.68

SO3142 18.7 16.2 25.6 peptidyl-dipeptidase Dcp (dcp-1) {Shewanella oneidensis MR-1} MW: 79764.35 pI: 6.18

SO3150 36.5 29.4 36.5 lipoprotein, putative {Shewanella oneidensis MR-1} MW: 13200.10 pI: 4.80

SO3158 20.3 23.8 23.8 polysaccharide synthesis-related protein {Shewanella oneidensis MR-1} MW: 28872.03 pI: 4.70

SO3172 50.8 50.8 50.8 galactosyl transferase {Shewanella oneidensis MR-1} MW: 20324.18 pI: 9.65

SO3175 11.4 13.1 13.1 asparagine synthetase, glutamine-hydrolyzing (asnB-2) {Shewanella oneidensis MR-1} MW: 73404.50 pI: 6.10

SO3178 14.8 8.9 14.8 hypothetical protein {Shewanella oneidensis MR-1} MW: 37851.98 pI: 7.18

SO3197 33.0 23.4 33.0 vacJ lipoprotein, putative {Shewanella oneidensis MR-1} MW: 29709.95 pI: 4.65

SO3286 14.9 15.3 16.2 cytochrome d ubiquinol oxidase, subunit I (cydA) {Shewanella oneidensis MR-1} MW: 58116.17 pI: 6.10

SO3309 13.9 11.6 13.9 PQQ enzyme repeat domain protein {Shewanella oneidensis MR-1} MW: 42690.17 pI: 4.82

SO3313 4.0 12.3 12.3 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 39381.55 pI: 5.11

SO3316 24.5 22.0 26.7 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 40277.89 pI: 5.09

SO3343 39.8 48.4 48.4 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 20653.40 pI: 6.58

SO3539 16.9 30.0 30.0 peptidase, M28D family {Shewanella oneidensis MR-1} MW: 44028.36 pI: 5.95

SO3541 7.0 5.1 7.0 sodium:alanine symporter family protein {Shewanella oneidensis MR-1} MW: 52080.61 pI: 6.44

SO3560 23.9 22.1 26.6 peptidase, M16 family {Shewanella oneidensis MR-1} MW:104608.37 pI: 5.32

SO3564 23.3 23.6 23.6 peptidyl-dipeptidase Dcp (dcp-2) {Shewanella oneidensis MR-1} MW: 78723.09 pI: 5.63

SO3565 26.7 20.9 26.7 2,3-cyclic-nucleotide 2-phosphodiesterase (cpdB) {Shewanella oneidensis MR-1} MW: 74928.80 pI: 5.06

SO3580 25.7 25.7 25.7 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 30517.65 pI: 6.33

SO3602 22.1 14.1 22.1 sulfate ABC transporter, ATP-binding protein (cysA-1) {Shewanella oneidensis MR-1} MW: 42193.30 pI: 6.68

SO3683 8.6 8.6 8.6 coniferyl aldehyde dehydrogenase {Shewanella oneidensis MR-1} MW: 52426.09 pI: 8.47

SO3740 35.4 36.8 36.8 NAD(P) transhydrogenase, alpha subunit (pntA) {Shewanella oneidensis MR-1} MW: 53563.50 pI: 5.88

SO3741 11.7 17.7 17.7 NAD(P) transhydrogenase, beta subunit (pntB) {Shewanella oneidensis MR-1} MW: 49439.34 pI: 5.45

SO3746 14.9 14.9 14.9 lipid A biosynthesis lauroyl acyltransferase (htrB) {Shewanella oneidensis MR-1} MW: 35422.17 pI: 9.28

SO3761 21.9 17.9 21.9 hypothetical protein {Shewanella oneidensis MR-1} MW: 36690.69 pI: 9.33

SO3906 19.6 21.7 21.7 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 36010.95 pI: 5.40

SO3914 9.9 12.2 14.1 TonB-dependent receptor, putative {Shewanella oneidensis MR-1} MW: 79970.12 pI: 4.87

SO3943 24.4 19.4 24.4 protease DegS (degS) {Shewanella oneidensis MR-1} MW: 38045.26 pI: 5.86

SO3954 10.3 10.3 10.3 ABC transporter, ATP-binding protein, putative {Shewanella oneidensis MR-1} MW: 29811.63 pI: 5.54

SO3960 18.1 8.6 18.1 ABC transporter, ATP-binding protein {Shewanella oneidensis MR-1} MW: 27008.24 pI: 6.45

SO3969 33.3 37.7 37.7 OmpA family protein {Shewanella oneidensis MR-1} MW: 23318.48 pI: 9.54

SO4014 11.5 11.2 14.8 AcrB/AcrD/AcrF family protein {Shewanella oneidensis MR-1} MW:110553.91 pI: 5.23

SO4017 7.3 7.3 7.3 transglycosylase, Slt family {Shewanella oneidensis MR-1} MW: 52910.32 pI: 9.16

SO4097 10.4 23.4 23.4 rod shape-determining protein MreC (mreC) {Shewanella oneidensis MR-1} MW: 38448.86 pI: 6.46

SO4128 10.3 10.3 10.3 SPFH domain/Band 7 family protein {Shewanella oneidensis MR-1} MW: 34955.02 pI: 5.26

SO4129 22.2 16.1 25.7 SPFH domain/Band 7 family protein {Shewanella oneidensis MR-1} MW: 35068.91 pI: 7.82

SO4139 7.2 7.2 7.2 conserved domain protein {Shewanella oneidensis MR-1} MW: 58421.23 pI: 5.30

SO4219 22.9 18.8 22.9 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (murG) {Shewanella oneidensis MR-1} MW: 38380.89 pI: 9.02

SO4247 10.3 10.3 10.3 ribosomal protein L28 (rpmB) {Shewanella oneidensis MR-1} MW: 9112.75 pI:11.42

SO4310 28.1 28.1 28.1 hypothetical protein {Shewanella oneidensis MR-1} MW: 6990.17 pI: 9.58

SO4315 43.2 44.4 49.3 hemX protein (hemX) {Shewanella oneidensis MR-1} MW: 45886.13 pI: 5.38

SO4319 15.9 9.1 22.1 HlyD family secretion protein {Shewanella oneidensis MR-1} MW: 53908.68 pI: 5.31

SO4321 57.7 57.7 57.7 OmpA family protein {Shewanella oneidensis MR-1} MW: 22175.69 pI: 4.70

SO4323 9.9 8.3 12.8 GGDEF domain protein {Shewanella oneidensis MR-1} MW: 72874.97 pI: 5.65

SO4327 23.1 27.2 40.3 HlyD family secretion domain protein {Shewanella oneidensis MR-1} MW: 41038.58 pI: 6.39

SO4340 25.1 25.1 25.1 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 31284.91 pI: 6.32

SO4365 25.6 36.0 36.0 hypothetical protein {Shewanella oneidensis MR-1} MW: 32887.61 pI: 4.84

SO4399 14.2 14.2 14.2 hypothetical protein {Shewanella oneidensis MR-1} MW: 21728.33 pI: 5.21

SO4505 68.8 51.4 68.8 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 23975.20 pI: 4.21

SO4513 6.9 7.8 8.4 formate dehydrogenase, alpha subunit {Shewanella oneidensis MR-1} MW:105444.36 pI: 6.96

SO4520 17.8 21.6 32.6 oxygen-independent coproporphyrinogen III oxidase, putative {Shewanella oneidensis MR-1} MW: 50890.84 pI: 6.68

SO4523 18.2 13.1 18.2 iron-regulated outer membrane virulence protein (irgA) {Shewanella oneidensis MR-1} MW: 73306.75 pI: 4.81

SO4557 14.8 13.8 16.4 methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 67305.10 pI: 4.73

SO4602 17.2 13.8 19.0 glycerol-3-phosphate acyltransferase (plsB) {Shewanella oneidensis MR-1} MW: 91562.11 pI: 8.55

SO4666 46.9 46.9 46.9 cytochrome c (cytcB) {Shewanella oneidensis MR-1} MW: 21917.29 pI: 7.68

SO4685 6.5 6.5 6.5 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 55157.81 pI: 5.14

SO4692 9.5 11.7 14.4 AcrB/AcrD/AcrF family protein {Shewanella oneidensis MR-1} MW:112544.80 pI: 5.29

SO4743 23.0 33.5 33.5 TonB-dependent receptor, putative {Shewanella oneidensis MR-1} MW: 77216.68 pI: 4.59

SO4746 50.7 50.0 50.7 ATP synthase F1, epsilon subunit (atpC) {Shewanella oneidensis MR-1} MW: 15176.52 pI: 5.35

SO4750 74.0 59.3 74.0 ATP synthase F1, delta subunit (atpH) {Shewanella oneidensis MR-1} MW: 19175.16 pI: 5.32

SOA0106 24.5 19.4 24.5 methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 59669.86 pI: 4.89

SOA0110 5.1 6.2 7.0 lipoprotein, putative {Shewanella oneidensis MR-1} MW:145926.16 pI: 4.35

SOA0112
SOA0115 8.1 11.3 12.0
12.0 lipoprotein, putative {Shewanella oneidensis MR-1} MW:145615.76 pI: 4.36
lipoprotein, putative {Shewanella oneidensis MR-1} MW:145615.76 pI: 4.36

SOA0114 19.0 12.0 19.0 outer membrane protein A (ompA) {Shewanella oneidensis MR-1} MW: 37372.71 pI: 6.24

SOA0140 10.3 15.9 15.9 hypothetical protein {Shewanella oneidensis MR-1} MW: 87639.91 pI: 5.25

165 X X

Locus control_crude_run1
2pep_def control_crude_run2
2pep_def control_memb_run1
2pep_def control_memb_run2
2pep_def Total Description

SO4510 14.1 14.1 14.1 formate dehydrogenase, iron-sulfur subunit (fdhB-1) {Shewanella oneidensis MR-1} MW: 21556.87 pI: 7.36

1 X X

Locus control_crude_run1
2pep_def control_crude_run2
2pep_def control_memb_run1
2pep_def control_memb_run2
2pep_def Total Description

SO0011 14.0 15.8 15.8 DNA gyrase, B subunit (gyrB) {Shewanella oneidensis MR-1} MW: 89987.21 pI: 5.43

SO0014 18.9 12.8 18.9 glycyl-tRNA synthetase, beta subunit (glyS) {Shewanella oneidensis MR-1} MW: 74936.23 pI: 5.36

SO0020 11.6 21.4 21.4 fatty oxidation complex, beta subunit (fadA) {Shewanella oneidensis MR-1} MW: 40755.49 pI: 6.21

SO0031 16.7 16.7 16.7 methionyl-tRNA formyltransferase (fmt) {Shewanella oneidensis MR-1} MW: 34593.70 pI: 6.10

SO0049 7.8 8.4 11.9 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (gpmA) {Shewanella oneidensis MR-1} MW: 55921.96 pI: 5.29

SO0065 31.6 32.2 37.3 molybdenum cofactor biosynthesis protein Mog (mog) {Shewanella oneidensis MR-1} MW: 19328.43 pI: 4.66

SO0076 15.0 15.9 24.0 hypothetical protein {Shewanella oneidensis MR-1} MW: 93317.06 pI: 5.26

SO0097 9.9 10.1 12.1 urocanate hydratase (hutU) {Shewanella oneidensis MR-1} MW: 60392.00 pI: 5.71

SO0138 10.8 8.4 12.9 molybdopterin biosynthesis MoeA protein (moeA) {Shewanella oneidensis MR-1} MW: 44756.44 pI: 5.38

SO0139 21.3 21.3 21.3 ferritin (ftn) {Shewanella oneidensis MR-1} MW: 20318.07 pI: 4.77

SO0228 36.0 28.7 37.2 translation elongation factor G (fusA-1) {Shewanella oneidensis MR-1} MW: 76949.76 pI: 5.04

SO0264 29.3 29.3 29.3 cytochrome c (scyA) {Shewanella oneidensis MR-1} MW: 10423.11 pI: 7.66

SO0274 4.3 4.3 4.3 phosphoenolpyruvate carboxylase (ppc) {Shewanella oneidensis MR-1} MW: 99543.92 pI: 6.00

SO0286 18.7 18.7 18.7 shikimate kinase (aroK) {Shewanella oneidensis MR-1} MW: 19147.78 pI: 5.30

SO0294 11.7 14.2 14.2 tryptophanyl-tRNA synthetase (trpS) {Shewanella oneidensis MR-1} MW: 36769.56 pI: 6.19

SO0298 11.7 11.7 11.7 phosphoheptose isomerase (gmhA) {Shewanella oneidensis MR-1} MW: 20946.01 pI: 4.54

SO0301 22.4 14.2 22.4 conserved hypothetical protein TIGR00096 {Shewanella oneidensis MR-1} MW: 30428.09 pI: 5.87

SO0314 8.5 8.5 8.5 ornithine decarboxylase, inducible (speF) {Shewanella oneidensis MR-1} MW: 81101.31 pI: 5.99

SO0333 11.4 18.8 24.3 thiol:disulfide interchange protein DsbA (dsbA) {Shewanella oneidensis MR-1} MW: 22303.78 pI: 7.75

SO0393 39.6 39.6 39.6 DNA-binding protein Fis (fis) {Shewanella oneidensis MR-1} MW: 11390.19 pI: 9.10

SO0435 20.6 20.6 20.6 uroporphyrinogen decarboxylase (hemE) {Shewanella oneidensis MR-1} MW: 39236.24 pI: 6.01

SO0441 21.5 23.6 28.5 phosphoribosylamine--glycine ligase (purD) {Shewanella oneidensis MR-1} MW: 45538.59 pI: 4.80

SO0442 25.4 26.0 32.2 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (purH) {Shewanella oneidensis MR-1} MW: 58221.48 pI: 5.78

SO0456 11.3 11.3 11.3 immunogenic-related protein {Shewanella oneidensis MR-1} MW: 33532.62 pI: 7.80

SO0548 51.1 28.9 51.1 DNA-binding protein, HU family {Shewanella oneidensis MR-1} MW: 9686.04 pI: 9.82

SO0575 8.4 8.1 10.2 RNA polymerase-associated protein HepA (hepA) {Shewanella oneidensis MR-1} MW:109262.50 pI: 5.14

SO0578 6.6 6.6 6.6 hypothetical protein {Shewanella oneidensis MR-1} MW: 88272.66 pI: 5.63

SO0617 31.9 31.9 31.9 acetylornithine aminotransferase (argD) {Shewanella oneidensis MR-1} MW: 43214.49 pI: 5.43

SO0624 38.4 26.5 38.4 catabolite gene activator (crp) {Shewanella oneidensis MR-1} MW: 23706.80 pI: 7.74

SO0691 29.9 22.4 43.3 hypothetical protein {Shewanella oneidensis MR-1} MW: 15127.66 pI: 4.62

SO0703 60.4 60.4 60.4 chaperonin GroES (groES) {Shewanella oneidensis MR-1} MW: 10212.89 pI: 5.37

SO0769 38.5 25.0 50.0 arginine repressor (argR) {Shewanella oneidensis MR-1} MW: 16983.62 pI: 5.47

SO0775 29.0 29.0 29.0 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 11291.99 pI: 7.88

SO0779 15.9 19.5 19.5 glycine cleavage system T protein (gcvT) {Shewanella oneidensis MR-1} MW: 39624.34 pI: 5.13

SO0781 11.9 11.9 11.9 glycine cleavage system P protein (gcvP) {Shewanella oneidensis MR-1} MW:104673.76 pI: 5.70

SO0832 21.8 21.8 21.8 conserved hypothetical protein TIGR00046 {Shewanella oneidensis MR-1} MW: 26601.71 pI: 6.39

SO0869 22.4 17.1 27.0 pantoate--beta-alanine ligase (panC) {Shewanella oneidensis MR-1} MW: 30435.12 pI: 5.89

SO0870 20.1 20.1 20.1 3-methyl-2-oxobutanoate hydroxymethyltransferase (panB) {Shewanella oneidensis MR-1} MW: 28208.39 pI: 5.38

SO0874 48.3 42.9 48.3 DnaK suppressor protein (dksA) {Shewanella oneidensis MR-1} MW: 16824.19 pI: 5.13

SO0887 24.4 24.4 24.4 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 38484.81 pI: 4.97

SO0888 8.8 6.5 12.3 amidase family protein {Shewanella oneidensis MR-1} MW: 60996.10 pI: 5.16

SO0897 17.9 9.8 17.9 ATP-dependent RNA helicase DbpA (dbpA) {Shewanella oneidensis MR-1} MW: 50408.29 pI: 6.44

SO0929 13.6 13.6 15.7 S-adenosylmethionine synthetase (metK) {Shewanella oneidensis MR-1} MW: 41380.04 pI: 5.29

SO0930 27.0 22.7 28.5 transketolase (tkt) {Shewanella oneidensis MR-1} MW: 71616.11 pI: 5.42

SO0932 40.7 34.3 43.7 phosphoglycerate kinase (pgk) {Shewanella oneidensis MR-1} MW: 40598.51 pI: 4.80

SO0947 9.0 18.3 18.3 ATP-dependent RNA helicase SrmB (srmB) {Shewanella oneidensis MR-1} MW: 46809.53 pI: 9.50

SO0951 29.5 7.5 32.4 thiol:disulfide interchange protein DsbC (dsbC) {Shewanella oneidensis MR-1} MW: 26234.49 pI: 6.90

SO0958 15.9 43.9 43.9 alkyl hydroperoxide reductase, C subunit (ahpC) {Shewanella oneidensis MR-1} MW: 20857.80 pI: 5.15

SO0959 20.5 10.4 20.5 cytosol aminopeptidase (pepA-1) {Shewanella oneidensis MR-1} MW: 54331.26 pI: 6.48

SO0970 28.2 29.7 29.7 fumarate reductase flavoprotein subunit precursor {Shewanella oneidensis MR-1} MW: 62448.13 pI: 7.27

SO0992 10.4 10.4 10.4 lysyl-tRNA synthetase (lysS) {Shewanella oneidensis MR-1} MW: 57060.15 pI: 5.19

SO1016 7.3 5.3 10.9 NADH dehydrogenase I, G subunit (nuoG) {Shewanella oneidensis MR-1} MW:100079.69 pI: 5.96

SO1075 12.0 14.1 18.8 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 80675.83 pI: 5.85

SO1101 47.9 40.8 47.9 autoinducer-2 production protein LuxS (luxS) {Shewanella oneidensis MR-1} MW: 18874.61 pI: 4.77

SO1112 15.5 14.8 23.9 bacterioferritin subunit 1 (bfr1) {Shewanella oneidensis MR-1} MW: 17974.51 pI: 4.72

SO1121 7.3 7.3 7.3 glutamate 5-kinase (proB) {Shewanella oneidensis MR-1} MW: 39672.92 pI: 6.32

SO1141 46.9 31.6 46.9 carbamoyl-phosphate synthase, small subunit (carA) {Shewanella oneidensis MR-1} MW: 41347.30 pI: 5.73

SO1150 21.0 24.2 28.3 ribose 5-phosphate isomerase (rpiA) {Shewanella oneidensis MR-1} MW: 23312.04 pI: 5.04

SO1161 11.5 11.5 11.5 lipoic acid synthetase (lipA) {Shewanella oneidensis MR-1} MW: 36464.24 pI: 8.36

SO1174 17.2 12.2 17.2 leucyl-tRNA synthetase (leuS) {Shewanella oneidensis MR-1} MW: 96827.36 pI: 5.13

SO1185 23.7 17.9 23.7 conserved hypothetical protein TIGR00092 {Shewanella oneidensis MR-1} MW: 39457.18 pI: 4.73

SO1190 12.1 5.9 14.3 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 29973.18 pI: 6.47

SO1191 30.4 20.9 30.4 transcription elongation factor GreA (greA) {Shewanella oneidensis MR-1} MW: 17433.92 pI: 4.78

SO1196 29.2 29.7 42.1 ribosomal RNA large subunit methyltransferase J (rrmJ) {Shewanella oneidensis MR-1} MW: 23134.86 pI: 8.77

SO1200 32.3 47.7 47.7 triosephosphate isomerase (tpiA) {Shewanella oneidensis MR-1} MW: 28073.16 pI: 5.67

SO1202 26.5 19.9 26.5 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 16408.89 pI: 4.66

SO1205 36.7 27.9 38.1 ribosome-binding factor A (rbfA) {Shewanella oneidensis MR-1} MW: 16765.09 pI: 4.77

SO1217 21.5 28.5 28.5 deoxyribose-phosphate aldolase (deoC) {Shewanella oneidensis MR-1} MW: 27445.53 pI: 4.83

SO1218 5.2 5.2 5.2 thymidine phosphorylase (deoA) {Shewanella oneidensis MR-1} MW: 47015.98 pI: 4.99

SO1221 47.5 37.7 47.5 purine nucleoside phosphorylase (deoD-2) {Shewanella oneidensis MR-1} MW: 25602.65 pI: 5.30

SO1287 17.0 17.0 17.0 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 15926.68 pI: 5.52

SO1300 34.9 19.8 34.9 glutamate-1-semialdehyde-2,1-aminomutase (hemL) {Shewanella oneidensis MR-1} MW: 46133.10 pI: 5.51

SO1315 29.4 18.1 33.4 tyrosyl-tRNA synthetase (tyrS) {Shewanella oneidensis MR-1} MW: 44027.99 pI: 5.79

SO1349 19.2 19.2 19.2 GTP-binding protein Era (era) {Shewanella oneidensis MR-1} MW: 38099.91 pI: 5.97

SO1351 9.0 4.5 9.0 pyridoxal phosphate biosynthetic protein PdxJ (pdxJ) {Shewanella oneidensis MR-1} MW: 26559.64 pI: 6.00

SO1368 7.4 7.4 7.4 cytosol aminopeptidase (pepA-2) {Shewanella oneidensis MR-1} MW: 54723.08 pI: 6.06

SO1388 12.0 14.5 14.5 aminopeptidase P, putative {Shewanella oneidensis MR-1} MW: 65716.64 pI: 5.31

SO1457 8.2 8.0 8.2 type I restriction-modification system, M subunit, putative {Shewanella oneidensis MR-1} MW: 78430.66 pI: 5.29

SO1460 8.1 3.6 8.1 type I restriction-modification system, S subunit, putative {Shewanella oneidensis MR-1} MW: 49422.94 pI: 7.26

SO1489 19.3 19.3 19.3 hypothetical protein {Shewanella oneidensis MR-1} MW: 15614.64 pI: 5.94

SO1490 27.5 41.1 41.1 alcohol dehydrogenase II (adhB) {Shewanella oneidensis MR-1} MW: 40013.46 pI: 5.68

SO1538 16.4 20.9 20.9 isocitrate dehydrogenase, NAD-dependent {Shewanella oneidensis MR-1} MW: 36024.51 pI: 5.74

SO1556 25.3 28.9 28.9 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 33649.67 pI: 5.15

SO1581 18.7 18.7 18.7 phnA protein (phnA) {Shewanella oneidensis MR-1} MW: 20482.28 pI: 4.56

SO1582 26.8 32.4 32.4 transcriptional regulator, MarR family {Shewanella oneidensis MR-1} MW: 19723.68 pI: 6.30

SO1602 6.0 4.0 6.0 multi-domain beta-ketoacyl synthase {Shewanella oneidensis MR-1} MW:271567.63 pI: 5.02

SO1611 59.8 48.0 59.8 hypothetical protein {Shewanella oneidensis MR-1} MW: 13875.37 pI: 6.31

SO1625 8.8 8.8 8.8 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (dapD) {Shewanella oneidensis MR-1} MW: 29873.41 pI: 6.02

SO1627 32.1 25.3 32.1 methionine aminopeptidase, type I (map) {Shewanella oneidensis MR-1} MW: 29453.97 pI: 6.08

SO1632 36.8 32.4 40.5 ribosome recycling factor (frr) {Shewanella oneidensis MR-1} MW: 20586.70 pI: 6.76

SO1638 34.5 21.4 34.5 outer membrane protein OmpH (ompH) {Shewanella oneidensis MR-1} MW: 18992.20 pI: 9.02

SO1639 9.1 9.1 9.1 UDP-3-O-(3-hydroxymyristoyl) glucosamine n-acyltransferase (lpxD) {Shewanella oneidensis MR-1} MW: 35769.66 pI: 5.74

SO1641 9.0 9.0 9.0 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (lpxA) {Shewanella oneidensis MR-1} MW: 27669.73 pI: 6.83

SO1648 66.7 66.7 66.7 cold shock domain family protein {Shewanella oneidensis MR-1} MW: 8913.22 pI: 6.55

SO1665 29.8 40.4 40.4 UTP-glucose-1-phosphate uridylyltransferase (galU) {Shewanella oneidensis MR-1} MW: 32870.23 pI: 5.59

SO1679 28.1 21.0 34.8 acyl-CoA dehydrogenase family protein {Shewanella oneidensis MR-1} MW: 41972.81 pI: 4.98

SO1683 28.6 19.4 28.6 3-oxoacyl-(acyl-carrier-protein) reductase, putative {Shewanella oneidensis MR-1} MW: 26466.37 pI: 4.90

SO1755 13.6 5.9 13.6 phosphoglucomutase/phosphomannomutase family protein {Shewanella oneidensis MR-1} MW: 62212.64 pI: 5.64

SO1790 18.9 18.9 18.9 peptidyl-prolyl cis-trans isomerase B (ppiB-1) {Shewanella oneidensis MR-1} MW: 18054.59 pI: 5.30

SO1791 8.3 7.6 11.3 cysteinyl-tRNA synthetase (cysS) {Shewanella oneidensis MR-1} MW: 52139.12 pI: 5.38

SO1795 10.1 3.1 10.1 ATP-dependent Clp protease, ATP-binding subunit ClpX (clpX) {Shewanella oneidensis MR-1} MW: 46507.31 pI: 5.17

SO1796 22.7 23.8 25.1 ATP-dependent protease La (lon) {Shewanella oneidensis MR-1} MW: 87523.52 pI: 5.60

SO1800 27.8 18.5 30.2 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 43912.15 pI: 5.04

SO1816 19.0 13.3 23.5 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 24378.48 pI: 5.37

SO1849 24.6 18.4 24.6 hypothetical protein {Shewanella oneidensis MR-1} MW: 20517.39 pI: 4.14

SO1856 18.1 18.1 18.1 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase (fabA) {Shewanella oneidensis MR-1} MW: 18807.99 pI: 5.92

SO1870 3.8 3.8 3.8 biosynthetic arginine decarboxylase (speA) {Shewanella oneidensis MR-1} MW: 71004.79 pI: 4.81

SO1877 20.5 20.5 20.5 bacterioferritin comigratory protein (bcp) {Shewanella oneidensis MR-1} MW: 16897.29 pI: 6.27

SO1879 19.7 26.2 33.0 dihydrodipicolinate synthase (dapA) {Shewanella oneidensis MR-1} MW: 30944.84 pI: 5.29

SO1891 11.0 18.3 18.3 3-oxoadipate CoA-succinyl transferase, beta subunit {Shewanella oneidensis MR-1} MW: 23300.25 pI: 4.76

SO1892 26.1 20.1 26.1 acetate CoA-transferase, subunit A (atoD) {Shewanella oneidensis MR-1} MW: 25153.15 pI: 5.65

SO1893 19.4 19.4 19.4 hydroxymethylglutaryl-CoA lyase (mvaB) {Shewanella oneidensis MR-1} MW: 33111.27 pI: 6.01

SO1894 9.8 7.1 12.4 acetyl-CoA carboxylase, biotin carboxylase, putative {Shewanella oneidensis MR-1} MW: 75656.84 pI: 5.28

SO1896 19.3 21.1 23.0 3-methylcrotonyl CoA carboxylase, beta subunit (pccB-1) {Shewanella oneidensis MR-1} MW: 57985.80 pI: 6.42

SO1897 33.9 36.5 36.5 isovaleryl-CoA dehydrogenase (ivd) {Shewanella oneidensis MR-1} MW: 42075.18 pI: 5.56

SO1926 21.5 14.5 21.5 citrate synthase (gltA) {Shewanella oneidensis MR-1} MW: 48080.35 pI: 5.74

SO1995 14.2 8.6 14.2 peptidyl-prolyl cis-trans isomerase, FkbP family {Shewanella oneidensis MR-1} MW: 17694.99 pI: 5.79

SO2012 7.2 7.2 7.2 adenine phosphoribosyltransferase (apt) {Shewanella oneidensis MR-1} MW: 19543.67 pI: 5.16

SO2018 47.7 60.3 60.3 adenylate kinase (adk) {Shewanella oneidensis MR-1} MW: 23093.51 pI: 5.57

SO2040 2.7 2.7 2.7 soluble lytic murein transglycosylase, putative {Shewanella oneidensis MR-1} MW: 73585.87 pI: 9.19

SO2085 18.3 16.2 18.3 phenylalanyl-tRNA synthetase, alpha subunit (pheS) {Shewanella oneidensis MR-1} MW: 37337.88 pI: 5.38

SO2086 19.4 13.6 21.1 phenylalanyl-tRNA synthetase, beta subunit (pheT) {Shewanella oneidensis MR-1} MW: 86574.88 pI: 5.14

SO2087 52.0 41.8 52.0 integration host factor, alpha subunit (ihfA) {Shewanella oneidensis MR-1} MW: 10976.58 pI: 9.69

SO2177 14.3 25.1 25.1 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 38148.97 pI: 4.78

SO2180 12.2 12.2 12.2 peptidase, M23/M37 family {Shewanella oneidensis MR-1} MW: 33539.69 pI: 9.54

SO2218 5.6 6.9 10.1 asparaginyl-tRNA synthetase (asnS) {Shewanella oneidensis MR-1} MW: 52189.97 pI: 5.09

SO2222 27.5 25.0 29.8 fumarate hydratase, class I, anaerobic, putative {Shewanella oneidensis MR-1} MW: 55156.10 pI: 5.53

SO2223 8.4 8.4 8.4 peptidase, putative {Shewanella oneidensis MR-1} MW: 77004.86 pI: 5.28

SO2260 25.5 12.7 31.1 extragenic suppressor protein SuhB (suhB) {Shewanella oneidensis MR-1} MW: 29309.54 pI: 6.61

SO2263 20.3 20.3 20.3 Rrf2 family protein {Shewanella oneidensis MR-1} MW: 16530.17 pI: 8.49

SO2264 21.0 30.0 30.0 cysteine desulfurase (iscS) {Shewanella oneidensis MR-1} MW: 44860.38 pI: 6.11

SO2265 29.9 29.9 29.9 NifU family protein {Shewanella oneidensis MR-1} MW: 13543.55 pI: 5.36

SO2268 13.1 6.9 13.1 chaperone protein HscA (hscA) {Shewanella oneidensis MR-1} MW: 66419.96 pI: 4.93

SO2269 36.0 25.2 36.0 ferredoxin, 2Fe-2S {Shewanella oneidensis MR-1} MW: 12219.06 pI: 4.26

SO2274 63.6 55.2 63.6 nucleoside diphosphate kinase (ndk) {Shewanella oneidensis MR-1} MW: 15482.55 pI: 5.50

SO2303 36.6 37.2 37.2 thioredoxin reductase (trxB) {Shewanella oneidensis MR-1} MW: 34084.77 pI: 5.22

SO2304 28.3 29.1 30.2 alanine dehydrogenase, authentic point mutation (ald) {Shewanella oneidensis MR-1} MW: 39181.74 pI: 5.89

SO2305 16.1 29.8 36.3 leucine-responsive regulatory protein (lrp) {Shewanella oneidensis MR-1} MW: 19177.20 pI: 6.91

SO2310 26.2 33.4 36.9 seryl-tRNA synthetase (serS) {Shewanella oneidensis MR-1} MW: 46883.67 pI: 5.36

SO2328 11.8 21.0 21.0 translation elongation factor P (efp) {Shewanella oneidensis MR-1} MW: 20619.43 pI: 4.79

SO2342 9.2 9.2 9.2 quinolinate synthetase complex, subunit A (nadA) {Shewanella oneidensis MR-1} MW: 38708.73 pI: 5.71

SO2345 34.5 26.8 34.5 glyceraldehyde 3-phosphate dehydrogenase (gapA-2) {Shewanella oneidensis MR-1} MW: 36480.58 pI: 5.83

SO2396 21.7 21.7 21.7 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 20629.64 pI: 7.74

SO2398 20.3 19.9 33.3 orotidine 5`-phosphate decarboxylase (pyrF) {Shewanella oneidensis MR-1} MW: 24985.34 pI: 5.78

SO2401 29.5 30.5 37.9 integration host factor, beta subunit (ihfB) {Shewanella oneidensis MR-1} MW: 10648.16 pI: 9.05

SO2411 11.0 6.7 11.0 DNA gyrase, A subunit (gyrA) {Shewanella oneidensis MR-1} MW:101689.28 pI: 4.79

SO2433 33.7 28.3 33.7 aspartyl-tRNA synthetase (aspS) {Shewanella oneidensis MR-1} MW: 66075.76 pI: 5.25

SO2471 10.9 10.9 10.9 succinyl-diaminopimelate desuccinylase (dapE) {Shewanella oneidensis MR-1} MW: 41525.21 pI: 5.09

SO2476 23.8 21.0 23.8 polysaccharide biosynthesis protein {Shewanella oneidensis MR-1} MW: 43644.39 pI: 5.65

SO2477 18.0 17.4 20.5 alcohol dehydrogenase, iron-containing {Shewanella oneidensis MR-1} MW: 39435.65 pI: 4.92

SO2489 5.1 5.1 5.1 glucose-6-phosphate 1-dehydrogenase (zwf) {Shewanella oneidensis MR-1} MW: 55850.78 pI: 6.08

SO2491 30.3 28.4 33.2 pyruvate kinase II (pykA) {Shewanella oneidensis MR-1} MW: 51185.97 pI: 5.81

SO2530 8.6 8.6 8.6 polypeptide deformylase (def-3) {Shewanella oneidensis MR-1} MW: 18221.12 pI: 5.12

SO2587 8.7 8.7 8.7 delta-aminolevulinic acid dehydratase (hemB-1) {Shewanella oneidensis MR-1} MW: 36802.25 pI: 5.53

SO2590 22.4 18.5 22.4 GTP-binding protein {Shewanella oneidensis MR-1} MW: 34982.79 pI: 8.54

SO2601 23.0 20.4 23.2 carboxyl-terminal protease {Shewanella oneidensis MR-1} MW: 76443.11 pI: 5.57

SO2602 18.3 18.3 18.3 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 23369.23 pI: 9.52

SO2618 10.2 12.7 12.7 ATP-binding protein, Mrp/Nbp35 family {Shewanella oneidensis MR-1} MW: 39180.49 pI: 4.93

SO2619 7.2 9.0 10.9 methionyl-tRNA synthetase (metG) {Shewanella oneidensis MR-1} MW: 76286.98 pI: 5.39

SO2625 25.0 25.0 25.0 translation initiation factor IF-1 (infA) {Shewanella oneidensis MR-1} MW: 8272.77 pI: 9.60

SO2629 42.1 34.4 42.1 isocitrate dehydrogenase, NADP-dependent (icd) {Shewanella oneidensis MR-1} MW: 80501.14 pI: 5.62

SO2635 30.5 25.0 30.5 adenylosuccinate lyase (purB) {Shewanella oneidensis MR-1} MW: 50808.33 pI: 5.62

SO2638 48.0 43.3 48.0 leucine dehydrogenase (ldh) {Shewanella oneidensis MR-1} MW: 37081.41 pI: 5.77

SO2646 7.1 9.3 9.3 phospho-2-dehydro-3-deoxyheptonate aldolase, trp-sensitive (aroH) {Shewanella oneidensis MR-1} MW: 39336.30 pI: 6.02

SO2705 19.0 18.2 20.7 DNA topoisomerase I (topA) {Shewanella oneidensis MR-1} MW: 98008.04 pI: 8.26

SO2706 6.1 7.2 9.7 succinylarginine dihydrolase (astB) {Shewanella oneidensis MR-1} MW: 49060.81 pI: 6.01

SO2730 22.9 22.9 22.9 peptidase E (pepE) {Shewanella oneidensis MR-1} MW: 25956.90 pI: 5.71

SO2731 9.1 9.1 11.4 periplasmic glucans biosynthesis protein MdoG (mdoG-2) {Shewanella oneidensis MR-1} MW: 59631.78 pI: 8.23

SO2740 10.3 5.4 10.3 biotin synthase (bioB) {Shewanella oneidensis MR-1} MW: 38790.34 pI: 5.17

SO2743 9.8 9.8 9.8 acetyl-coenzyme A synthetase (acs) {Shewanella oneidensis MR-1} MW: 72342.29 pI: 5.99

SO2746 41.2 20.4 41.2 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 27236.67 pI: 8.65

SO2748 5.2 9.7 9.7 tolB protein (tolB) {Shewanella oneidensis MR-1} MW: 48400.43 pI: 8.89

SO2759 37.5 37.5 37.5 uracil phosphoribosyltransferase (upp) {Shewanella oneidensis MR-1} MW: 22570.44 pI: 5.33

SO2760 16.2 11.6 16.2 phosphoribosylformylglycinamidine cyclo-ligase (purM) {Shewanella oneidensis MR-1} MW: 37508.11 pI: 4.67

SO2761 7.0 23.8 23.8 phosphoribosylglycinamide formyltransferase (purN) {Shewanella oneidensis MR-1} MW: 23482.62 pI: 5.03

SO2774 18.7 13.1 18.7 3-oxoacyl-(acyl-carrier-protein) synthase II (fabF-1) {Shewanella oneidensis MR-1} MW: 42863.86 pI: 5.72

SO2775 40.3 31.2 40.3 acyl carrier protein (acpP) {Shewanella oneidensis MR-1} MW: 8570.55 pI: 4.01

SO2776 53.2 39.1 53.2 3-oxoacyl-(acyl-carrier-protein) reductase (fabG-1) {Shewanella oneidensis MR-1} MW: 26381.42 pI: 5.15

SO2777 14.3 14.3 16.6 malonyl CoA-acyl carrier protein transacylase (fabD) {Shewanella oneidensis MR-1} MW: 31808.86 pI: 4.82

SO2832 12.7 18.6 18.6 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 13304.65 pI:10.06

SO2838 2.9 2.9 2.9 ATP-dependent RNA helicase, DEAD box family {Shewanella oneidensis MR-1} MW: 49401.35 pI: 9.56

SO2853 12.4 10.5 12.4 3-oxoacyl-(acyl-carrier-protein) synthase III, putative {Shewanella oneidensis MR-1} MW: 37799.28 pI: 4.92

SO2912 17.2 18.6 18.6 formate acetyltransferase (pflB) {Shewanella oneidensis MR-1} MW: 84860.42 pI: 5.54

SO2937 19.2 14.8 19.2 RNA pseudouridylate synthase family protein {Shewanella oneidensis MR-1} MW: 32785.80 pI: 9.99

SO3024 38.5 38.5 38.5 tryptophan synthase, alpha subunit (trpA) {Shewanella oneidensis MR-1} MW: 28808.02 pI: 5.03

SO3064 14.5 8.7 16.9 amidophosphoribosyltransferase (purF) {Shewanella oneidensis MR-1} MW: 55754.53 pI: 5.62

SO3072 34.0 27.3 34.0 3-oxoacyl-(acyl-carrier-protein) synthase I (fabB) {Shewanella oneidensis MR-1} MW: 43133.22 pI: 5.48

SO3113 20.3 20.3 20.3 queuine tRNA-ribosyltransferase (tgt) {Shewanella oneidensis MR-1} MW: 42578.62 pI: 5.56

SO3125 8.4 8.4 8.4 ATP-dependent RNA helicase, DEAD box family {Shewanella oneidensis MR-1} MW: 46220.43 pI: 9.24

SO3144 18.2 14.3 19.8 electron transfer flavoprotein, alpha subunit (etfA) {Shewanella oneidensis MR-1} MW: 31382.01 pI: 4.97

SO3145 26.5 43.0 43.0 electron transfer flavoprotein, beta subunit (etfB) {Shewanella oneidensis MR-1} MW: 26674.23 pI: 7.77

SO3146 71.5 43.1 71.5 DNA-binding protein, H-NS family {Shewanella oneidensis MR-1} MW: 14599.83 pI: 5.57

SO3154 10.2 5.6 10.2 prolyl-tRNA synthetase (proS) {Shewanella oneidensis MR-1} MW: 63196.54 pI: 5.24

SO3189 12.1 16.8 16.8 polysaccharide biosynthesis protein {Shewanella oneidensis MR-1} MW: 37783.58 pI: 5.34

SO3194 24.7 24.7 24.7 transcriptional activator rfaH, putative {Shewanella oneidensis MR-1} MW: 19277.58 pI: 9.16

SO3206 22.2 17.9 22.2 protein-glutamate methylesterase CheB (cheB-3) {Shewanella oneidensis MR-1} MW: 39483.91 pI: 8.75

SO3287 5.2 6.3 7.3 phosphoribosylformylglycinamidine synthase (purL) {Shewanella oneidensis MR-1} MW:140598.89 pI: 5.09

SO3292 16.0 14.1 16.0 GMP synthase (guaA) {Shewanella oneidensis MR-1} MW: 58084.07 pI: 5.37

SO3308 11.7 8.2 11.7 GTP-binding protein EngA (engA) {Shewanella oneidensis MR-1} MW: 54531.41 pI: 6.56

SO3312 16.7 9.4 16.7 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (ispG) {Shewanella oneidensis MR-1} MW: 40603.70 pI: 6.08

SO3367 12.6 12.6 12.6 conserved hypothetical protein TIGR00091 {Shewanella oneidensis MR-1} MW: 26773.69 pI: 6.64

SO3403 22.0 16.1 22.0 ribosomal subunit interface protein (yfiA-1) {Shewanella oneidensis MR-1} MW: 13151.12 pI: 6.43

SO3411 3.7 3.7 3.7 protease, putative {Shewanella oneidensis MR-1} MW:121200.07 pI: 5.82

SO3420 32.9 32.9 32.9 cytochrome c {Shewanella oneidensis MR-1} MW: 16282.63 pI: 6.83

SO3424 9.3 9.5 10.8 valyl-tRNA synthetase (valS) {Shewanella oneidensis MR-1} MW:108756.48 pI: 5.13

SO3441 28.0 22.5 29.3 CTP synthase (pyrG) {Shewanella oneidensis MR-1} MW: 60149.05 pI: 6.03

SO3442 12.9 12.9 12.9 MazG family protein {Shewanella oneidensis MR-1} MW: 30029.05 pI: 4.87

SO3467 19.3 22.3 22.3 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative (ribBA) {Shewanella oneidensis MR-1} MW: 40196.21 pI: 5.57

SO3471 34.1 25.7 43.6 serine hydroxymethyltransferase (glyA) {Shewanella oneidensis MR-1} MW: 45282.82 pI: 6.13

SO3529 18.6 18.6 18.6 penicillin tolerance protein LytB (lytB) {Shewanella oneidensis MR-1} MW: 34718.52 pI: 5.17

SO3532 9.7 2.1 9.7 isoleucyl-tRNA synthetase (ileS) {Shewanella oneidensis MR-1} MW:105792.32 pI: 5.56

SO3546 27.4 23.6 27.4 transaldolase (tal) {Shewanella oneidensis MR-1} MW: 35022.16 pI: 4.88

SO3547 7.2 9.2 9.2 glucose-6-phosphate isomerase (pgi) {Shewanella oneidensis MR-1} MW: 59662.52 pI: 6.22

SO3554 19.0 19.0 19.0 phosphoribosylaminoimidazole carboxylase, catalytic subunit (purE) {Shewanella oneidensis MR-1} MW: 16943.80 pI: 5.87

SO3571 20.3 20.3 20.3 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 23617.99 pI: 8.73

SO3577 14.0 5.8 16.8 clpB protein (clpB) {Shewanella oneidensis MR-1} MW: 95476.82 pI: 5.36

SO3599 14.0 10.4 14.0 sulfate ABC transporter, periplasmic sulfate-binding protein (cysP) {Shewanella oneidensis MR-1} MW: 37109.25 pI: 8.46

SO3695 19.5 14.9 22.4 dihydroorotase, homodimeric type (pyrC) {Shewanella oneidensis MR-1} MW: 37851.16 pI: 5.89

SO3715 12.4 12.4 12.4 oxygen-insensitive NAD(P)H nitroreductase {Shewanella oneidensis MR-1} MW: 24184.80 pI: 6.17

SO3770 25.7 28.8 28.8 conserved hypothetical protein TIGR00153 {Shewanella oneidensis MR-1} MW: 25519.85 pI: 4.73

SO3783 9.9 12.5 12.5 ATP-dependent RNA helicase, DEAD box family {Shewanella oneidensis MR-1} MW: 57867.76 pI:10.12

SO3812 29.7 36.9 36.9 peptidyl-prolyl cis-trans isomerase A (ppiA) {Shewanella oneidensis MR-1} MW: 21630.87 pI: 5.73

SO3815 16.8 16.8 16.8 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 18352.84 pI: 6.75

SO3827 32.6 30.1 32.6 2-dehydro-3-deoxyphosphooctonate aldolase (kdsA) {Shewanella oneidensis MR-1} MW: 30950.84 pI: 5.59

SO3833 20.4 18.5 25.1 peptide chain release factor 1 (prfA) {Shewanella oneidensis MR-1} MW: 40344.24 pI: 4.93

SO3837 42.2 53.0 53.3 ribose-phosphate pyrophosphokinase (prsA) {Shewanella oneidensis MR-1} MW: 33985.30 pI: 5.46

SO3842 22.3 11.3 25.2 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 34113.60 pI: 5.56

SO3855 11.7 17.6 21.0 malate oxidoreductase (sfcA) {Shewanella oneidensis MR-1} MW: 62162.32 pI: 5.25

SO3856 16.0 16.0 16.0 hypothetical protein {Shewanella oneidensis MR-1} MW: 16377.62 pI: 5.14

SO3863 45.3 45.3 45.3 molybdenum ABC transporter, periplasmic molybdenum-binding protein (modA) {Shewanella oneidensis MR-1} MW: 27338.01 pI: 5.77

SO3897 11.9 9.6 13.6 DNA topoisomerase IV, A subunit (parC) {Shewanella oneidensis MR-1} MW: 84476.40 pI: 6.06

SO3918 6.4 8.7 12.0 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 82006.92 pI: 5.52

SO3937 17.4 7.2 17.4 adenylosuccinate synthetase (purA) {Shewanella oneidensis MR-1} MW: 46927.15 pI: 5.57

SO3967 16.3 10.9 16.3 molybdenum ABC transporter, periplasmic molybdenum-binding protein, putative {Shewanella oneidensis MR-1} MW: 27097.24 pI: 6.74

SO3980 18.2 13.5 18.2 cytochrome c552 nitrite reductase {Shewanella oneidensis MR-1} MW: 52333.97 pI: 8.14

SO3988 45.8 37.8 48.3 aerobic respiration control protein ArcA (arcA) {Shewanella oneidensis MR-1} MW: 27220.13 pI: 5.51

SO3991 16.3 22.2 22.2 fructose-1,6-bisphosphatase (fbp) {Shewanella oneidensis MR-1} MW: 35301.28 pI: 5.19

SO4008 5.3 7.9 9.5 hypothetical protein {Shewanella oneidensis MR-1} MW:139422.09 pI: 5.79

SO4015 9.7 9.7 9.7 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 46360.10 pI: 6.12

SO4028 16.4 14.3 18.1 single-strand binding protein (ssb) {Shewanella oneidensis MR-1} MW: 25773.42 pI: 5.90

SO4066 28.6 22.3 31.1 phosphoribosylaminoimidazole-succinocarboxamide synthase, putative {Shewanella oneidensis MR-1} MW: 40901.97 pI: 5.25

SO4079 22.0 17.5 22.0 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 20627.62 pI: 7.79

SO4091 17.4 8.3 17.4 tldD protein (tldD) {Shewanella oneidensis MR-1} MW: 51047.15 pI: 5.26

SO4118 14.7 11.4 18.1 malate oxidoreductase, putative {Shewanella oneidensis MR-1} MW: 44112.94 pI: 5.55

SO4123 5.3 7.2 7.2 arginyl-tRNA synthetase (argS) {Shewanella oneidensis MR-1} MW: 64637.80 pI: 5.45

SO4133 21.8 17.5 26.6 uridine phosphorylase (udp) {Shewanella oneidensis MR-1} MW: 26852.78 pI: 5.25

SO4162 10.3 14.4 14.4 ATP-dependent protease HslV (hslV) {Shewanella oneidensis MR-1} MW: 18917.79 pI: 6.08

SO4190 22.2 11.1 25.8 inorganic pyrophosphatase, manganese-dependent (ppaC) {Shewanella oneidensis MR-1} MW: 33449.89 pI: 4.75

SO4223 8.0 11.5 11.5 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase (murF) {Shewanella oneidensis MR-1} MW: 48943.14 pI: 6.01

SO4227 15.7 12.1 15.7 conserved hypothetical protein TIGR00006 {Shewanella oneidensis MR-1} MW: 35135.96 pI: 6.11

SO4246 29.8 31.6 45.6 ribosomal protein L33 (rpmG) {Shewanella oneidensis MR-1} MW: 6733.05 pI:10.17

SO4249 21.3 12.5 25.5 DNA/pantothenate metabolism flavoprotein (dfp) {Shewanella oneidensis MR-1} MW: 43322.99 pI: 5.72

SO4250 23.7 31.6 31.6 deoxyuridine 5-triphosphate nucleotidohydrolase (dut) {Shewanella oneidensis MR-1} MW: 16113.61 pI: 5.01

SO4254 16.2 16.2 16.2 GTP cyclohydrolase I (folE) {Shewanella oneidensis MR-1} MW: 24223.15 pI: 7.02

SO4256 9.7 9.7 9.7 ribonuclease PH (rph) {Shewanella oneidensis MR-1} MW: 25620.33 pI: 5.54

SO4265 15.1 11.5 16.6 type I restriction-modification system, M subunit (hsdM-2) {Shewanella oneidensis MR-1} MW: 59377.30 pI: 5.01

SO4313 50.0 38.1 50.0 porphobilinogen deaminase (hemC) {Shewanella oneidensis MR-1} MW: 33463.74 pI: 5.07

SO4317 1.1 1.8 1.8 RTX toxin, putative {Shewanella oneidensis MR-1} MW:285096.59 pI: 3.86

SO4408 20.6 12.1 20.6 virulence regulator BipA (bipA) {Shewanella oneidensis MR-1} MW: 65981.28 pI: 5.06

SO4561 44.6 38.3 44.6 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 17870.43 pI: 5.06

SO4619 6.2 6.2 6.2 yhgI protein (yhgI) {Shewanella oneidensis MR-1} MW: 20516.22 pI: 4.41

SO4629 9.4 5.7 11.0 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 85794.37 pI: 6.30

SO4640 31.0 21.5 31.0 antioxidant, AhpC/Tsa family {Shewanella oneidensis MR-1} MW: 16573.28 pI: 4.94

SO4667 19.2 19.2 19.2 GTP-binding protein EngB (engB) {Shewanella oneidensis MR-1} MW: 24432.31 pI: 6.92

SO4674 12.8 12.8 12.8 2-amino-3-ketobutyrate coenzyme A ligase (kbl) {Shewanella oneidensis MR-1} MW: 42905.11 pI: 5.95

SO4684 15.3 15.3 15.3 phosphopantetheine adenylyltransferase (coaD) {Shewanella oneidensis MR-1} MW: 17950.61 pI: 6.30

SO4699 5.7 8.1 8.1 oligopeptidase A (prlC) {Shewanella oneidensis MR-1} MW: 76808.98 pI: 4.96

SO4702 13.1 9.3 13.1 glutathione reductase (gor) {Shewanella oneidensis MR-1} MW: 48270.30 pI: 6.01

SO4723 13.5 13.5 13.5 molybdopterin biosynthesis MoeA protein, putative {Shewanella oneidensis MR-1} MW: 64726.93 pI: 5.08

SO4741 8.2 5.7 12.2 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (glmS) {Shewanella oneidensis MR-1} MW: 66729.27 pI: 5.41

SO4745 5.5 5.5 5.5 UDP-N-acetylglucosamine pyrophosphorylase (glmU) {Shewanella oneidensis MR-1} MW: 48153.54 pI: 5.54

SO4758 8.9 6.8 10.7 glucose-inhibited division protein A (gidA) {Shewanella oneidensis MR-1} MW: 69250.29 pI: 6.44

SOA0051 35.2 28.7 36.9 hypothetical protein {Shewanella oneidensis MR-1} MW: 13951.89 pI: 5.90

SOA0061 17.1 17.1 17.1 parA protein, putative {Shewanella oneidensis MR-1} MW: 24230.79 pI: 6.73

SOA0096 23.4 18.1 23.4 partitioning protein B {Shewanella oneidensis MR-1} MW: 40409.40 pI: 8.64

275 X X

Locus control_crude_run1
2pep_def control_crude_run2
2pep_def control_memb_run1
2pep_def control_memb_run2
2pep_def Total Description

SO0066 2.4 2.4 conserved hypothetical protein {Shewanella oneidensis MR-1} MW:209120.09 pI: 5.19

SO0168 7.1 7.1 general secretion pathway protein F (gspF) {Shewanella oneidensis MR-1} MW: 44531.84 pI: 9.36

SO0176 13.4 13.4 general secretion pathway protein N (gspN) {Shewanella oneidensis MR-1} MW: 27558.32 pI: 8.81

SO0778 6.9 6.9 oxidoreductase, FAD-binding, UbiH/Coq6 family {Shewanella oneidensis MR-1} MW: 44594.17 pI: 5.81

SO0813 9.4 9.4 hypothetical protein {Shewanella oneidensis MR-1} MW: 52878.23 pI: 5.80

SO0847 9.4 9.4 iron-sulfur cluster-binding protein NapG (napG) {Shewanella oneidensis MR-1} MW: 26269.52 pI: 5.97

SO1166 6.8 6.8 membrane-bound lytic transglycosylase, putative {Shewanella oneidensis MR-1} MW: 39714.62 pI: 8.52

SO1168 8.6 8.6 penicillin-binding protein 2 (mrdA) {Shewanella oneidensis MR-1} MW: 69998.06 pI: 8.84

SO1390 7.7 7.7 peptidyl-prolyl cis-trans isomerase, FKBP-type {Shewanella oneidensis MR-1} MW: 17072.73 pI: 6.83

SO1424 5.1 5.1 hypothetical protein {Shewanella oneidensis MR-1} MW: 83620.73 pI: 5.00

SO1520 9.7 9.7 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 26630.18 pI: 5.88

SO1945 6.7 6.7 sensor protein PhoQ (phoQ) {Shewanella oneidensis MR-1} MW: 50842.80 pI: 5.86

SO2041 7.1 7.1 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 61511.68 pI: 5.38

SO2306 5.2 5.2 cell division protein FtsK, putative {Shewanella oneidensis MR-1} MW:100321.61 pI: 5.15

SO2494 7.9 7.9 zinc-dependent metallopeptidase {Shewanella oneidensis MR-1} MW: 69377.94 pI: 5.41

SO2566 12.7 12.7 asmA protein (asmA) {Shewanella oneidensis MR-1} MW: 65119.06 pI: 5.56

SO2581 9.2 9.2 long-chain-fatty-acid--CoA ligase (fadD-1) {Shewanella oneidensis MR-1} MW: 61707.86 pI: 8.55

SO2616 11.4 11.4 deoxycytidine triphosphate deaminase (dcd) {Shewanella oneidensis MR-1} MW: 21218.28 pI: 5.59

SO2751 15.4 15.4 MotA/TolQ/ExbB proton channel family protein {Shewanella oneidensis MR-1} MW: 25103.36 pI: 7.88

SO2753 7.3 7.3 prolyl endopeptidase {Shewanella oneidensis MR-1} MW: 81106.73 pI: 5.50

SO2842 15.4 15.4 peptidase, M23/M37 family {Shewanella oneidensis MR-1} MW: 47752.79 pI: 9.34

SO3069 8.5 8.5 conserved hypothetical protein {Shewanella oneidensis MR-1} MW:119594.76 pI: 3.94

SO3088 6.5 6.5 fatty oxidation complex, alpha subunit {Shewanella oneidensis MR-1} MW: 75872.66 pI: 8.75

SO3095 8.1 8.1 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 60456.42 pI: 5.41

SO3340 10.2 10.2 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 29889.04 pI: 6.15

SO3562 7.0 7.0 proton/glutamate symporter, putative {Shewanella oneidensis MR-1} MW: 43552.47 pI: 8.43

SO3597 16.3 16.3 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 19328.82 pI: 8.61

SO3718 14.8 14.8 thiol:disulfide interchange protein, DsbA family {Shewanella oneidensis MR-1} MW: 27726.47 pI: 5.89

SO3781 36.0 36.0 hypothetical protein {Shewanella oneidensis MR-1} MW: 18414.02 pI: 8.47

SO3959 32.8 32.8 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 19902.72 pI: 6.32

SO3966 15.0 15.0 magnesium transporter (mgtE-2) {Shewanella oneidensis MR-1} MW: 49452.60 pI: 4.52

SO3984 7.2 7.2 magnesium transporter, putative {Shewanella oneidensis MR-1} MW: 36171.95 pI: 5.31

SO4080 8.8 8.8 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 84799.79 pI: 4.70

SO4173 9.8 9.8 sensor histidine kinase {Shewanella oneidensis MR-1} MW: 46948.68 pI: 5.64

SO4201 4.9 4.9 ubiquinone biosynthesis protein AarF (aarF) {Shewanella oneidensis MR-1} MW: 63246.10 pI: 7.61

SO4225 8.2 8.2 peptidoglycan synthetase FtsI (ftsI) {Shewanella oneidensis MR-1} MW: 63717.22 pI: 9.38

SO4403 11.7 11.7 hypothetical protein {Shewanella oneidensis MR-1} MW: 25009.46 pI: 6.04

SO4662 11.2 11.2 lemA protein {Shewanella oneidensis MR-1} MW: 21055.49 pI: 5.67

SOA0141 5.9 5.9 hypothetical protein {Shewanella oneidensis MR-1} MW: 67118.72 pI: 5.69

39 X

Locus control_crude_run1
2pep_def control_crude_run2
2pep_def control_memb_run1
2pep_def control_memb_run2
2pep_def Total Description

SO0070 22.5 22.5 ATP-binding transport protein NatA (natA) {Shewanella oneidensis MR-1} MW: 26257.45 pI: 5.57

SO0398 6.9 6.9 fumarate reductase flavoprotein subunit (frdA) {Shewanella oneidensis MR-1} MW: 73303.84 pI: 6.07

SO0500
SO3890
SO2317
SO2117
SO1434
SO0584 1.8 1.8
1.9
2.6
2.7
1.8
1.9 methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 58942.29 pI: 4.94
methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 58452.87 pI: 5.89
methyl-accepting chemotaxis protein, truncation {Shewanella oneidensis MR-1} MW: 43822.97 pI: 5.48
methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 41771.52 pI: 4.88
methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 59346.60 pI: 4.97
methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 57277.83 pI: 6.07

SO0696 4.6 4.6 thiol:disulfide interchange protein DsbD (dsbD) {Shewanella oneidensis MR-1} MW: 66031.49 pI: 5.96

SO0918 4.8 4.8 aculeacin A acylase (aac) {Shewanella oneidensis MR-1} MW: 92309.50 pI: 5.01

SO0994 10.3 10.3 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 16074.64 pI: 8.66

SO1278
SO3838
SO3642
SO3582
SO3396
SO3282
SO3052
SO2083 2.3 2.3
2.6
2.4
3.0
3.4
2.4
2.8
3.2 methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 76425.26 pI: 4.94
methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 68435.93 pI: 4.85
methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 72503.13 pI: 5.02
methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 58677.88 pI: 4.95
methyl-accepting chemotaxis protein, truncation {Shewanella oneidensis MR-1} MW: 51258.98 pI: 6.18
methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 73021.25 pI: 5.60
methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 63769.04 pI: 5.03
methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 54968.51 pI: 5.15

SO1565 4.4 4.4 magnesium transporter, putative {Shewanella oneidensis MR-1} MW: 50475.07 pI: 4.38

SO2258 10.9 10.9 lipoprotein releasing system ATP-binding protein LolD (lolD) {Shewanella oneidensis MR-1} MW: 25065.83 pI: 6.16

SO2578 11.8 11.8 cell division topological specificity factor MinE (minE) {Shewanella oneidensis MR-1} MW: 9862.36 pI: 6.55

SO2614 10.4 10.4 conserved hypothetical protein TIGR00247 {Shewanella oneidensis MR-1} MW: 37847.94 pI: 8.37

SO3159 4.3 4.3 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 88982.98 pI: 4.93

SO3171 6.3 6.3 polysaccharide biosynthesis protein {Shewanella oneidensis MR-1} MW: 70973.18 pI: 8.62

SO3517 4.2 4.2 NADH dehydrogenase (ndh) {Shewanella oneidensis MR-1} MW: 47318.27 pI: 8.74

SO3834 8.9 8.9 glutamyl-tRNA reductase (hemA) {Shewanella oneidensis MR-1} MW: 45686.41 pI: 5.47

SO4053 6.2 6.2 methyl-accepting chemotaxis protein {Shewanella oneidensis MR-1} MW: 69249.69 pI: 5.24

SO4316 3.9 3.9 hemY protein, putative {Shewanella oneidensis MR-1} MW: 44115.55 pI: 9.09

SO4453 5.8 5.8 electron transfer flavoprotein-ubiquinone oxidoreductase, putative {Shewanella oneidensis MR-1} MW: 60196.66 pI: 5.52

SO4514 8.5 8.5 formate dehydrogenase, iron-sulfur subunit (fdhB-2) {Shewanella oneidensis MR-1} MW: 20491.60 pI: 7.36

SO4584 8.4 8.4 cell division permease protein FtsX (ftsX) {Shewanella oneidensis MR-1} MW: 35985.44 pI: 6.79

20 X

Locus control_crude_run1
2pep_def control_crude_run2
2pep_def control_memb_run1
2pep_def control_memb_run2
2pep_def Total Description

SO0053 11.2 11.2 glycerol-3-phosphate dehydrogenase (NAD(P)+) (gpsA) {Shewanella oneidensis MR-1} MW: 35778.38 pI: 5.91

SO0098 2.1 2.1 histidine ammonia-lyase (hutH) {Shewanella oneidensis MR-1} MW: 54431.61 pI: 5.08

SO0152 9.1 9.1 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 69775.96 pI: 5.36

SO0285 5.8 5.8 type IV pilus biogenesis protein PilQ {Shewanella oneidensis MR-1} MW: 74857.56 pI: 4.99

SO0356
SO3451
SO3443
SO3399
SO3044
SO2817
SO2811
SO2392
SO2344
SO2321
SO2292
SO2272
SO2078
SO1875
SO1767
SO1616
SO1438
SO1269
SO1026
SO0596
SO0378 6.5 6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5
6.5 ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45556.63 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45560.62 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45556.63 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45556.63 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80
ISSo4, transposase {Shewanella oneidensis MR-1} MW: 45586.66 pI: 8.80

SO0361 16.4 16.4 guanylate kinase (gmk) {Shewanella oneidensis MR-1} MW: 22991.97 pI: 5.30

SO0744 9.6 9.6 iron(III) ABC transporter, periplasmic iron(III)-binding protein {Shewanella oneidensis MR-1} MW: 37246.60 pI: 6.02

SO0788 11.1 11.1 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 9147.42 pI: 6.82

SO0808 26.7 26.7 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 11304.36 pI: 4.97

SO1111 21.7 21.7 bacterioferritin subunit 2 (bfr2) {Shewanella oneidensis MR-1} MW: 18385.23 pI: 4.82

SO1115 5.6 5.6 aminoacyl-histidine dipeptidase (pepD) {Shewanella oneidensis MR-1} MW: 52939.97 pI: 4.85

SO1149 10.1 10.1 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 44101.63 pI: 6.48

SO1219 6.7 6.7 phosphopentomutase (deoB) {Shewanella oneidensis MR-1} MW: 43508.03 pI: 5.06

SO1252 6.4 6.4 peptidase, U32 family {Shewanella oneidensis MR-1} MW: 50888.94 pI: 5.86

SO1304 20.4 20.4 HesB/YadR/YfhF family protein {Shewanella oneidensis MR-1} MW: 11559.10 pI: 4.68

SO1327 30.6 30.6 sensor histidine kinase-related protein {Shewanella oneidensis MR-1} MW: 13246.24 pI: 4.95

SO1383 6.2 6.2 ATP-dependent RNA helicase, DEAD box family {Shewanella oneidensis MR-1} MW: 48223.04 pI: 9.80

SO1536 27.4 27.4 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 40922.15 pI: 6.63

SO1680 34.2 34.2 enoyl-CoA hydratase/isomerase family protein {Shewanella oneidensis MR-1} MW: 27348.41 pI: 5.22

SO1682 8.3 8.3 3-hydroxyisobutyrate dehydrogenase (mmsB) {Shewanella oneidensis MR-1} MW: 30819.70 pI: 6.29

SO1869 28.0 28.0 hypothetical protein {Shewanella oneidensis MR-1} MW: 5707.68 pI: 8.80

SO1895 10.8 10.8 enoyl-CoA hydratase/isomerase family protein {Shewanella oneidensis MR-1} MW: 31677.24 pI: 5.36

SO2198 7.3 7.3 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 55693.99 pI: 5.81

SO2387 10.8 10.8 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 27928.47 pI: 8.56

SO2483 6.7 6.7 aspartate aminotransferase, putative {Shewanella oneidensis MR-1} MW: 45382.58 pI: 5.79

SO2486 29.1 29.1 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (eda) {Shewanella oneidensis MR-1} MW: 22286.17 pI: 5.04

SO2610 13.7 13.7 hydrolase, TatD family {Shewanella oneidensis MR-1} MW: 29592.94 pI: 5.37

SO2896 6.7 6.7 DNA ligase, NAD-dependent (ligA) {Shewanella oneidensis MR-1} MW: 75338.53 pI: 5.36

SO2935 15.5 15.5 oxidoreductase, short-chain dehydrogenase/reductase family {Shewanella oneidensis MR-1} MW: 26441.46 pI: 5.56

SO3016 9.7 9.7 Sua5/YciO/YrdC/YwlC family protein {Shewanella oneidensis MR-1} MW: 22918.40 pI: 5.13

SO3209 34.6 34.6 chemotaxis protein CheY (cheY-3) {Shewanella oneidensis MR-1} MW: 14196.61 pI: 5.79

SO3311 5.4 5.4 histidyl-tRNA synthetase (hisS) {Shewanella oneidensis MR-1} MW: 47524.30 pI: 5.33

SO3664 7.9 7.9 long-chain-fatty-acid--CoA ligase (fadD-2) {Shewanella oneidensis MR-1} MW: 58038.04 pI: 5.93

SO3743 18.2 18.2 transcriptional regulator, TetR family {Shewanella oneidensis MR-1} MW: 17786.45 pI: 7.97

SO3917 5.8 5.8 replicative DNA helicase (dnaB) {Shewanella oneidensis MR-1} MW: 52006.09 pI: 4.92

SO3948 3.1 3.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (murA) {Shewanella oneidensis MR-1} MW: 44766.31 pI: 5.44

SO4095 13.4 13.4 maf protein (maf) {Shewanella oneidensis MR-1} MW: 20687.68 pI: 4.77

SO4343 2.6 2.6 aminotransferase, class V {Shewanella oneidensis MR-1} MW: 40909.56 pI: 6.52

SO4669 2.5 2.5 DNA polymerase I (polA) {Shewanella oneidensis MR-1} MW:101908.79 pI: 5.20

SOA0004 7.2 7.2 type II DNA modification methyltransferase {Shewanella oneidensis MR-1} MW: 65861.74 pI: 5.41

SOA0041 11.4 11.4 transcriptional regulator, PemK family {Shewanella oneidensis MR-1} MW: 11665.70 pI: 8.93

41 X

Locus control_crude_run1
2pep_def control_crude_run2
2pep_def control_memb_run1
2pep_def control_memb_run2
2pep_def Total Description

SO0009 8.5 8.5 DNA polymerase III, beta subunit (dnaN) {Shewanella oneidensis MR-1} MW: 40933.24 pI: 5.21

SO0162 9.0 9.0 phosphoenolpyruvate carboxykinase (ATP) (pckA) {Shewanella oneidensis MR-1} MW: 55883.43 pI: 5.56

SO0358 22.8 22.8 endoribonuclease L-PSP, putative {Shewanella oneidensis MR-1} MW: 13708.86 pI: 4.64

SO0360 44.6 44.6 DNA-directed RNA polymerase, omega subunit (rpoZ) {Shewanella oneidensis MR-1} MW: 10124.57 pI: 4.84

SO0591 12.4 12.4 conserved hypothetical protein TIGR00157 {Shewanella oneidensis MR-1} MW: 38831.21 pI: 6.14

SO0603 23.3 23.3 host factor-I protein (hfq) {Shewanella oneidensis MR-1} MW: 9873.33 pI: 8.11

SO0756 7.4 7.4 phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive (aroG) {Shewanella oneidensis MR-1} MW: 39022.61 pI: 5.83

SO0830 7.0 7.0 alkaline phosphatase {Shewanella oneidensis MR-1} MW: 48544.65 pI: 5.01

SO0831 11.1 11.1 glutathione synthetase (gshB) {Shewanella oneidensis MR-1} MW: 34962.56 pI: 5.05

SO1063 50.0 50.0 slyX protein (slyX) {Shewanella oneidensis MR-1} MW: 8016.21 pI: 4.62

SO1122 8.0 8.0 gamma-glutamyl phosphate reductase (proA) {Shewanella oneidensis MR-1} MW: 45429.26 pI: 5.33

SO1163 21.6 21.6 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 9820.25 pI: 6.26

SO1180 18.3 18.3 PhoH family protein {Shewanella oneidensis MR-1} MW: 40194.04 pI: 6.18

SO1181 5.3 5.3 tRNA-i(6)A37 modification enzyme MiaB (miaB) {Shewanella oneidensis MR-1} MW: 53760.53 pI: 5.35

SO1265 8.2 8.2 transcriptional regulator, putative {Shewanella oneidensis MR-1} MW: 20157.87 pI: 4.98

SO1270 21.8 21.8 polyamine ABC transporter, periplasmic polyamine-binding protein {Shewanella oneidensis MR-1} MW: 40745.70 pI: 5.35

SO1339 41.5 41.5 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 9641.28 pI: 4.59

SO1358 12.4 12.4 16S rRNA processing protein RimM (rimM) {Shewanella oneidensis MR-1} MW: 20016.16 pI: 4.77

SO1404 11.7 11.7 endoribonuclease L-PSP, putative {Shewanella oneidensis MR-1} MW: 13824.89 pI: 5.56

SO1461 1.1 1.1 protein kinase, putative {Shewanella oneidensis MR-1} MW:155361.39 pI: 5.71

SO1608 10.4 10.4 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 33928.45 pI: 5.31

SO1670 13.4 13.4 fumarylacetoacetate hydrolase family protein {Shewanella oneidensis MR-1} MW: 36019.01 pI: 5.00

SO1756 18.6 18.6 glyoxalase family protein {Shewanella oneidensis MR-1} MW: 14189.43 pI: 4.61

SO1786 8.6 8.6 glutaminyl-tRNA synthetase (glnS) {Shewanella oneidensis MR-1} MW: 64103.45 pI: 5.59

SO1792 4.2 4.2 methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase (folD) {Shewanella oneidensis MR-1} MW: 30502.27 pI: 5.21

SO1853 6.6 6.6 ABC transporter, ATP-binding protein {Shewanella oneidensis MR-1} MW: 72183.19 pI: 5.07

SO1867 18.9 18.9 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 24784.29 pI: 5.41

SO1937 9.1 9.1 ferric uptake regulation protein (fur) {Shewanella oneidensis MR-1} MW: 16286.50 pI: 5.64

SO1952 5.7 5.7 gamma-glutamyltranspeptidase (ggt-2) {Shewanella oneidensis MR-1} MW: 62274.45 pI: 6.45

SO2107 8.8 8.8 periplasmic glucans biosynthesis protein MdoG (mdoG-1) {Shewanella oneidensis MR-1} MW: 55960.16 pI: 5.84

SO2136 4.7 4.7 aldehyde-alcohol dehydrogenase (adhE) {Shewanella oneidensis MR-1} MW: 93020.20 pI: 5.86

SO2215 8.9 8.9 sun protein, putative {Shewanella oneidensis MR-1} MW: 45111.10 pI: 6.64

SO2350 9.6 9.6 aspartate aminotransferase (aspC-1) {Shewanella oneidensis MR-1} MW: 42991.31 pI: 5.62

SO2487 4.8 4.8 6-phosphogluconate dehydratase (edd) {Shewanella oneidensis MR-1} MW: 64609.42 pI: 6.11

SO2626 3.3 3.3 ATP-dependent Clp protease, ATP-binding subunit ClpA (clpA) {Shewanella oneidensis MR-1} MW: 83667.75 pI: 5.93

SO2636 16.6 16.6 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 42755.12 pI: 4.23

SO2745 32.6 32.6 glutaredoxin {Shewanella oneidensis MR-1} MW: 9808.26 pI: 5.27

SO2778 3.8 3.8 3-oxoacyl-(acyl-carrier-protein) synthase III (fabH-1) {Shewanella oneidensis MR-1} MW: 34026.14 pI: 5.11

SO2780 17.9 17.9 ribosomal protein L32 (rpmF) {Shewanella oneidensis MR-1} MW: 6285.15 pI:11.04

SO2781 13.8 13.8 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 19198.31 pI: 4.44

SO2915 13.5 13.5 acetate kinase (ackA) {Shewanella oneidensis MR-1} MW: 43525.39 pI: 6.60

SO3070 8.3 8.3 aspartate semialdehyde dehydrogenese (asd) {Shewanella oneidensis MR-1} MW: 37189.28 pI: 4.95

SO3208 19.2 19.2 chemotaxis protein CheZ (cheZ) {Shewanella oneidensis MR-1} MW: 27850.97 pI: 4.53

SO3227 6.0 6.0 flagellar motor switch protein FliG (fliG) {Shewanella oneidensis MR-1} MW: 38249.02 pI: 4.55

SO3341 21.3 21.3 antioxidant, AhpC/TSA family {Shewanella oneidensis MR-1} MW: 21996.76 pI: 5.76

SO3354 10.3 10.3 pyrroline-5-carboxylate reductase (proC) {Shewanella oneidensis MR-1} MW: 28988.55 pI: 5.37

SO3426 26.2 26.2 carbon storage regulator (csrA) {Shewanella oneidensis MR-1} MW: 7125.22 pI: 6.56

SO3465 14.9 14.9 N utilization substance protein B (nusB) {Shewanella oneidensis MR-1} MW: 15150.45 pI: 6.31

SO3555 6.6 6.6 phosphoribosylaminoimidazole carboxylase, ATPase subunit (purK) {Shewanella oneidensis MR-1} MW: 40841.04 pI: 5.75

SO3656 40.0 40.0 hypothetical protein {Shewanella oneidensis MR-1} MW: 11513.65 pI: 4.09

SO3737 2.7 2.7 sulfite reductase (NADPH) hemoprotein beta-component (cysI) (cysI) {Shewanella oneidensis MR-1} MW: 63062.92 pI: 6.24

SO3745 7.8 7.8 ADP-heptose synthase (rfaE) {Shewanella oneidensis MR-1} MW: 50485.12 pI: 5.23

SO3749 13.1 13.1 hypothetical protein {Shewanella oneidensis MR-1} MW: 30280.37 pI: 5.06

SO3963 8.8 8.8 nitrogen regulatory IIA protein (ptsN) {Shewanella oneidensis MR-1} MW: 16100.95 pI: 5.90

SO3973 13.7 13.7 RIO1/ZK632.3/MJ0444 family, putative {Shewanella oneidensis MR-1} MW: 32115.50 pI: 4.96

SO4013
SOA0135 6.1 6.1
6.5 hypothetical protein {Shewanella oneidensis MR-1} MW: 68539.57 pI: 6.12
hypothetical protein {Shewanella oneidensis MR-1} MW: 63776.85 pI: 5.57

SO4047 8.0 8.0 cytochrome c family protein {Shewanella oneidensis MR-1} MW: 38364.53 pI: 7.00

SO4072 6.2 6.2 MiaB-like putative RNA modifying enzyme YliG (yliG) {Shewanella oneidensis MR-1} MW: 53634.07 pI: 4.72

SO4078 8.1 8.1 pmba protein (pmbA) {Shewanella oneidensis MR-1} MW: 47981.24 pI: 5.26

SO4109 4.3 4.3 MSHA biogenesis protein MshE (mshE) {Shewanella oneidensis MR-1} MW: 65209.43 pI: 5.75

SO4255 13.0 13.0 orotate phosphoribosyltransferase (pyrE) {Shewanella oneidensis MR-1} MW: 23828.42 pI: 5.49

SO4599 9.6 9.6 ribonuclease, T2 family {Shewanella oneidensis MR-1} MW: 43087.92 pI: 7.91

SO4659 7.8 7.8 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 31780.40 pI: 5.46

SO4718 7.2 7.2 sigma-54 dependent response regulator {Shewanella oneidensis MR-1} MW: 51633.45 pI: 5.97

SO4755 13.7 13.7 ParB family protein {Shewanella oneidensis MR-1} MW: 32530.75 pI: 6.22

SOA0002 34.7 34.7 type II restriction-modification system activator, putative {Shewanella oneidensis MR-1} MW: 8487.77 pI: 8.98

SOA0048 6.7 6.7 prolyl oligopeptidase family protein {Shewanella oneidensis MR-1} MW: 72173.32 pI: 6.53

SOA0062 21.8 21.8 hypothetical protein {Shewanella oneidensis MR-1} MW: 13303.30 pI: 7.93

SOA0100 4.8 4.8 conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 65539.66 pI: 6.84

69 X

Redundant
Count Nonredundant
Count Percent control_crude_run1
2pep_def control_crude_run2
2pep_def control_memb_run1
2pep_def control_memb_run2
2pep_def

148 148 18.5% X X X X

4 4 0.5% X X X

13 13 1.6% X X X

15 15 1.9% X X X

12 12 1.5% X X X

166 165 20.6% X X

1 1 0.1% X X

275 275 34.3% X X

39 39 4.9% X

32 20 2.5% X

61 41 5.1% X

70 69 8.6% X

836 802 533 495 363 384

The cells of the following table show the percentage of the row sample proteins which are found in the column sample.

Sample	Proteins	control_crude_run1-2pep_def	control_crude_run2-2pep_def	control_memb_run1-2pep_def	control_memb_run2-2pep_def
control_crude_run1-2pep_def	533	100.0%	84.4%	32.6%	33.0%
control_crude_run2-2pep_def	495	90.9%	100.0%	33.1%	33.7%
control_memb_run1-2pep_def	363	47.9%	45.2%	100.0%	90.9%
control_memb_run2-2pep_def	384	45.8%	43.5%	85.9%	100.0%

Locus	control_crude_run1 2pep_def	control_crude_run2 2pep_def	control_memb_run1 2pep_def	control_memb_run2 2pep_def	Total	Description
SO0008	17.4	10.9	5.0	7.4	18.9	chromosomal replication initiator protein DnaA (dnaA) {Shewanella oneidensis MR-1} MW: 51970.35 pI: 8.61
SO0021	18.2	14.8	8.8	5.3	20.0	fatty oxidation complex, alpha subunit (fadB) {Shewanella oneidensis MR-1} MW: 76692.77 pI: 5.84
SO0052	43.9	37.6	37.6	31.8	43.9	protein-export protein SecB (secB) {Shewanella oneidensis MR-1} MW: 17096.16 pI: 4.43
SO0166	8.8	8.8	22.9	18.6	24.6	general secretion pathway protein D (gspD) {Shewanella oneidensis MR-1} MW: 76859.75 pI: 5.45
SO0217	56.9	51.3	58.9	51.8	63.7	translation elongation factor Tu (tufB) {Shewanella oneidensis MR-1} MW: 43347.65 pI: 5.13
SO0220	62.7	62.7	38.0	21.1	62.7	ribosomal protein L11 (rplK) {Shewanella oneidensis MR-1} MW: 15107.63 pI: 9.64
SO0221	73.8	77.3	34.3	25.8	77.3	ribosomal protein L1 (rplA) {Shewanella oneidensis MR-1} MW: 24600.65 pI: 9.59
SO0222	79.5	77.1	59.6	58.4	79.5	ribosomal protein L10 (rplJ) {Shewanella oneidensis MR-1} MW: 17743.41 pI: 9.07
SO0223	38.5	26.2	29.5	29.5	38.5	ribosomal protein L7/L12 (rplL) {Shewanella oneidensis MR-1} MW: 12516.40 pI: 4.63
SO0224	48.8	50.6	12.8	14.6	54.3	DNA-directed RNA polymerase, beta subunit (rpoB) {Shewanella oneidensis MR-1} MW:150295.71 pI: 5.28
SO0225	39.0	34.2	9.4	9.6	40.9	DNA-directed RNA polymerase, beta subunit (rpoC) {Shewanella oneidensis MR-1} MW:155520.41 pI: 5.97
SO0227	57.1	57.7	47.4	48.1	57.7	ribosomal protein S7 (rpsG) {Shewanella oneidensis MR-1} MW: 17730.73 pI:10.21
SO0229	57.4	51.8	59.4	52.3	64.2	translation elongation factor Tu (tufA) {Shewanella oneidensis MR-1} MW: 43284.60 pI: 5.08
SO0230	40.8	36.9	30.1	30.1	47.6	ribosomal protein S10 (rpsJ) {Shewanella oneidensis MR-1} MW: 11768.63 pI: 9.76
SO0231	58.5	55.2	28.3	36.3	58.5	ribosomal protein L3 (rplC) {Shewanella oneidensis MR-1} MW: 22531.91 pI: 9.94
SO0232	40.8	39.3	28.9	32.3	44.3	ribosomal protein L4 (rplD) {Shewanella oneidensis MR-1} MW: 21981.39 pI: 9.60
SO0233	44.6	30.7	34.7	20.8	44.6	ribosomal protein L23 (rplW) {Shewanella oneidensis MR-1} MW: 11067.87 pI: 9.85
SO0234	31.4	31.4	20.1	25.2	38.3	ribosomal protein L2 (rplB) {Shewanella oneidensis MR-1} MW: 29963.74 pI:10.86
SO0236	60.0	60.0	53.6	40.9	65.5	ribosomal protein L22 (rplV) {Shewanella oneidensis MR-1} MW: 12071.20 pI:10.22
SO0237	53.5	53.5	53.5	53.5	53.5	ribosomal protein S3 (rpsC) {Shewanella oneidensis MR-1} MW: 25754.92 pI:10.05
SO0238	49.3	47.8	43.4	47.8	49.3	ribosomal protein L16 (rplP) {Shewanella oneidensis MR-1} MW: 15396.41 pI:11.37
SO0239	22.2	38.1	22.2	22.2	38.1	ribosomal protein L29 (rpmC) {Shewanella oneidensis MR-1} MW: 7170.44 pI:10.51
SO0241	36.9	35.2	27.9	27.9	44.3	ribosomal protein L14 (rplN) {Shewanella oneidensis MR-1} MW: 13455.90 pI:10.75
SO0242	51.0	41.3	36.5	35.6	51.0	ribosomal protein L24 (rplX) {Shewanella oneidensis MR-1} MW: 11318.38 pI:10.29
SO0243	67.6	65.9	50.8	50.8	68.7	ribosomal protein L5 (rplE) {Shewanella oneidensis MR-1} MW: 20231.66 pI: 9.28
SO0244	30.7	30.7	42.6	42.6	42.6	ribosomal protein S14 (rpsN) {Shewanella oneidensis MR-1} MW: 11362.20 pI:11.49
SO0245	66.2	59.2	20.0	20.0	66.2	ribosomal protein S8 (rpsH) {Shewanella oneidensis MR-1} MW: 14039.65 pI: 9.52
SO0246	58.8	58.8	50.3	50.3	58.8	ribosomal protein L6 (rplF) {Shewanella oneidensis MR-1} MW: 18923.11 pI: 9.77
SO0247	55.2	44.8	49.1	49.1	58.6	ribosomal protein L18 (rplR) {Shewanella oneidensis MR-1} MW: 12722.70 pI:10.63
SO0248	70.7	67.1	31.7	31.7	74.3	ribosomal protein S5 (rpsE) {Shewanella oneidensis MR-1} MW: 17740.65 pI:10.24
SO0249	61.7	48.3	33.3	23.3	61.7	ribosomal protein L30 (rpmD) {Shewanella oneidensis MR-1} MW: 6682.92 pI:10.20
SO0250	47.2	47.2	59.7	47.2	59.7	ribosomal protein L15 (rplO) {Shewanella oneidensis MR-1} MW: 15080.75 pI:11.39
SO0253	56.8	54.2	41.5	41.5	56.8	ribosomal protein S13 (rpsM) {Shewanella oneidensis MR-1} MW: 13320.76 pI:11.10
SO0254	42.3	42.3	42.3	42.3	42.3	ribosomal protein S11 (rpsK) {Shewanella oneidensis MR-1} MW: 13891.87 pI:11.37
SO0255	54.9	54.4	47.1	50.5	57.8	ribosomal protein S4 (rpsD) {Shewanella oneidensis MR-1} MW: 23436.12 pI:10.12
SO0256	72.0	60.5	29.2	20.7	79.6	DNA-directed RNA polymerase, alpha subunit (rpoA) {Shewanella oneidensis MR-1} MW: 36160.36 pI: 4.77
SO0257	48.9	48.9	48.9	48.9	48.9	ribosomal protein L17 (rplQ) {Shewanella oneidensis MR-1} MW: 14714.01 pI:10.70
SO0404	17.8	16.1	52.3	54.6	56.9	hypothetical protein {Shewanella oneidensis MR-1} MW:128779.24 pI: 5.13
SO0406	78.7	62.0	23.1	23.1	78.7	thioredoxin 1 (trxA) {Shewanella oneidensis MR-1} MW: 11888.78 pI: 4.57
SO0425	16.0	16.8	6.2	7.4	16.8	pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase (aceF) {Shewanella oneidensis MR-1} MW: 69398.86 pI: 4.99
SO0426	37.1	33.5	32.0	29.7	43.2	pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (lpdA) {Shewanella oneidensis MR-1} MW: 50536.63 pI: 5.56
SO0432	37.9	39.7	8.7	11.9	39.7	aconitate hydratase 2 (acnB) {Shewanella oneidensis MR-1} MW: 93393.50 pI: 5.15
SO0608	27.6	27.6	56.6	43.4	56.6	ubiquinol-cytochrome c reductase, iron-sulfur subunit (petA) {Shewanella oneidensis MR-1} MW: 20905.05 pI: 7.70
SO0610	11.7	11.7	31.6	27.3	32.5	ubiquinol-cytochrome c reductase, cytochrome c1 (petC) {Shewanella oneidensis MR-1} MW: 25973.97 pI: 5.87
SO0704	82.8	75.6	69.0	71.9	87.5	chaperonin GroEL (groEL) {Shewanella oneidensis MR-1} MW: 57079.82 pI: 4.84
SO0840	9.2	8.4	30.7	36.1	42.5	acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylase {Shewanella oneidensis MR-1} MW:167623.86 pI: 5.77
SO0842	45.5	40.0	18.8	10.0	47.1	translation elongation factor G (fusA-2) {Shewanella oneidensis MR-1} MW: 76662.73 pI: 4.91
SO0845	16.1	16.1	27.3	21.7	32.9	cytochrome c-type protein NapB (napB) {Shewanella oneidensis MR-1} MW: 15431.74 pI: 8.60
SO0848	18.5	11.7	32.3	34.7	42.5	periplasmic nitrate reductase (napA) {Shewanella oneidensis MR-1} MW: 92474.90 pI: 8.06
SO0933	34.4	28.7	22.8	21.7	34.4	fructose-bisphosphate aldolase, class II, Calvin cycle subtype (fba) {Shewanella oneidensis MR-1} MW: 38511.01 pI: 5.71
SO1017	8.2	8.2	8.2	8.2	8.2	NADH dehydrogenase I, F subunit (nuoF) {Shewanella oneidensis MR-1} MW: 50220.83 pI: 8.00
SO1051	11.6	6.0	12.6	15.4	17.9	periplasmic glucan biosynthesis protein, putative {Shewanella oneidensis MR-1} MW: 67751.17 pI: 5.89
SO1065	16.9	23.1	49.4	47.1	67.1	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA (fkpA) {Shewanella oneidensis MR-1} MW: 27701.55 pI: 5.07
SO1126	68.9	71.8	54.1	42.1	76.7	chaperone protein DnaK (dnaK) {Shewanella oneidensis MR-1} MW: 68861.79 pI: 4.77
SO1127	25.4	25.9	26.5	17.7	43.9	chaperone protein DnaJ (dnaJ) {Shewanella oneidensis MR-1} MW: 40763.24 pI: 8.67
SO1197	6.2	5.9	31.3	35.4	38.1	cell division protein FtsH (ftsH) {Shewanella oneidensis MR-1} MW: 71227.64 pI: 5.32
SO1203	44.7	36.5	13.2	8.6	45.9	N utilization substance protein A (nusA) {Shewanella oneidensis MR-1} MW: 55273.55 pI: 4.49
SO1204	36.2	34.9	7.3	12.8	44.4	translation initiation factor IF-2 (infB) {Shewanella oneidensis MR-1} MW: 96113.50 pI: 5.93
SO1207	58.4	28.1	46.1	51.7	58.4	ribosomal protein S15 (rpsO) {Shewanella oneidensis MR-1} MW: 10215.85 pI:10.41
SO1209	35.6	34.8	17.2	16.7	40.3	polyribonucleotide nucleotidyltransferase (pnp) {Shewanella oneidensis MR-1} MW: 75832.00 pI: 5.11
SO1284	22.7	21.8	10.4	10.2	26.9	RNA polymerase sigma-70 factor (rpoD) {Shewanella oneidensis MR-1} MW: 70392.63 pI: 4.70
SO1288	39.4	39.4	43.7	42.3	43.7	ribosomal protein S21 (rpsU) {Shewanella oneidensis MR-1} MW: 8344.85 pI:11.18
SO1356	23.0	21.2	39.2	30.6	39.2	signal recognition particle protein Ffh (ffh) {Shewanella oneidensis MR-1} MW: 49912.72 pI: 9.58
SO1360	47.9	52.1	29.1	37.6	62.4	ribosomal protein L19 (rplS) {Shewanella oneidensis MR-1} MW: 13292.44 pI:10.78
SO1521	12.8	15.6	40.4	39.1	43.4	iron-sulfur cluster-binding protein {Shewanella oneidensis MR-1} MW:102163.74 pI: 6.60
SO1524	70.4	65.5	37.4	40.8	70.4	heat shock protein GrpE (grpE) {Shewanella oneidensis MR-1} MW: 22702.59 pI: 4.47
SO1629	43.0	37.6	46.3	46.3	50.4	ribosomal protein S2 (rpsB) {Shewanella oneidensis MR-1} MW: 26569.59 pI: 7.85
SO1630	52.3	49.8	15.2	21.2	57.6	translation elongation factor Ts (tsf) {Shewanella oneidensis MR-1} MW: 30413.95 pI: 5.31
SO1677	49.7	43.7	10.9	16.2	49.7	acetyl-CoA acetyltransferase (atoB) {Shewanella oneidensis MR-1} MW: 40673.17 pI: 5.85
SO1793	63.6	56.0	27.9	27.4	63.6	trigger factor (tig) {Shewanella oneidensis MR-1} MW: 47596.48 pI: 4.87
SO1798	17.9	20.1	76.8	74.6	77.1	peptidyl-prolyl cis-trans isomerase D (ppiD) {Shewanella oneidensis MR-1} MW: 67497.48 pI: 4.89
SO1807	30.8	29.5	69.2	46.3	69.2	phage shock protein A (pspA) {Shewanella oneidensis MR-1} MW: 25575.26 pI: 5.32
SO1824	60.2	66.1	82.4	82.4	86.4	conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 24958.30 pI: 4.83
SO1825	14.6	7.3	58.3	55.7	60.5	MotA/TolQ/ExbB proton channel family protein {Shewanella oneidensis MR-1} MW: 48770.77 pI: 6.52
SO1928	7.7	6.1	42.0	37.4	42.0	succinate dehydrogenase, flavoprotein subunit (sdhA) {Shewanella oneidensis MR-1} MW: 64229.02 pI: 5.81
SO1929	15.3	9.8	38.3	37.4	43.8	succinate dehydrogenase, iron-sulfur protein (sdhB) {Shewanella oneidensis MR-1} MW: 26623.04 pI: 6.93
SO1930	15.2	9.9	6.3	7.1	18.2	2-oxoglutarate dehydrogenase, E1 component (sucA) {Shewanella oneidensis MR-1} MW:104864.85 pI: 6.01
SO1931	36.7	36.7	31.6	34.4	36.7	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase (sucB) {Shewanella oneidensis MR-1} MW: 42831.36 pI: 5.60
SO1932	52.3	50.0	16.2	14.7	52.3	succinyl-CoA synthase, beta subunit (sucC) {Shewanella oneidensis MR-1} MW: 41361.89 pI: 5.18
SO1933	32.4	32.4	7.9	9.0	32.4	succinyl-CoA synthase, alpha subunit (sucD) {Shewanella oneidensis MR-1} MW: 29707.51 pI: 5.70
SO2001	16.0	7.6	45.5	47.1	48.5	5-nucleotidase (ushA) {Shewanella oneidensis MR-1} MW: 60992.14 pI: 5.06
SO2014	41.3	34.9	32.1	32.1	41.3	conserved hypothetical protein TIGR00103 {Shewanella oneidensis MR-1} MW: 12001.25 pI: 5.19
SO2016	42.9	39.2	8.9	5.8	45.1	heat shock protein HtpG (htpG) {Shewanella oneidensis MR-1} MW: 71767.43 pI: 5.25
SO2300	59.4	59.4	35.7	24.5	60.8	translation initiation factor IF-3 (infC) {Shewanella oneidensis MR-1} MW: 16468.18 pI: 9.28
SO2302	52.5	33.9	22.9	29.7	53.4	ribosomal protein L20 (rplT) {Shewanella oneidensis MR-1} MW: 13566.96 pI:11.34
SO2339	29.8	26.5	33.4	39.3	45.9	alpha keto acid dehydrogenase complex, E1 component, alpha subunit {Shewanella oneidensis MR-1} MW: 43555.89 pI: 6.39
SO2340	20.0	20.0	32.6	29.2	32.6	alpha keto acid dehydrogenase complex, E1 component, beta subunit {Shewanella oneidensis MR-1} MW: 35372.43 pI: 5.13
SO2341	14.0	25.0	31.0	30.7	32.7	alpha keto acid dehydrogenase complex, E2 component {Shewanella oneidensis MR-1} MW: 57320.24 pI: 5.32
SO2347	35.2	28.3	13.2	12.8	35.2	glyceraldehyde 3-phosphate dehydrogenase (gapA-3) {Shewanella oneidensis MR-1} MW: 52288.85 pI: 6.40
SO2363	10.6	10.6	28.4	38.0	38.0	cytochrome c oxidase, cbb3-type, subunit II (ccoO) {Shewanella oneidensis MR-1} MW: 23430.91 pI: 6.24
SO2402	55.1	50.8	32.8	20.7	55.7	ribosomal protein S1 (rpsA) {Shewanella oneidensis MR-1} MW: 61262.43 pI: 4.91
SO2415	12.9	8.9	3.9	4.6	16.7	ribonucleoside-diphosphate reductase, alpha subunit (nrdA) {Shewanella oneidensis MR-1} MW: 85712.20 pI: 6.14
SO2427	7.4	7.4	33.3	31.9	33.9	TonB-dependent receptor, putative {Shewanella oneidensis MR-1} MW: 91958.40 pI: 4.38
SO2592	10.3	13.3	33.3	33.0	36.0	dihydroorotate dehydrogenase (pyrD) {Shewanella oneidensis MR-1} MW: 36582.66 pI: 8.61
SO2593	18.0	13.9	6.3	7.8	20.5	conserved hypothetical protein {Shewanella oneidensis MR-1} MW:182333.90 pI: 5.91
SO2637	18.0	18.0	18.0	18.0	18.0	hypothetical protein {Shewanella oneidensis MR-1} MW: 17500.06 pI: 9.39
SO2749	7.5	7.5	21.2	21.2	21.2	tolA protein (tolA) {Shewanella oneidensis MR-1} MW: 37734.89 pI: 8.97
SO2756	57.2	57.2	21.9	32.3	57.2	antioxidant, AhpC/Tsa family, authentic frameshift {Shewanella oneidensis MR-1} MW: 21840.94 pI: 5.19
SO2785	20.6	19.5	21.5	22.1	26.8	ribonuclease E (rne) {Shewanella oneidensis MR-1} MW:120494.07 pI: 5.56
SO2787	100.0	100.0	63.8	78.3	100.0	cold shock domain family protein {Shewanella oneidensis MR-1} MW: 7523.42 pI: 5.08
SO2903	41.6	47.5	30.1	38.8	47.5	cysteine synthase A (cysK) {Shewanella oneidensis MR-1} MW: 34420.67 pI: 5.80
SO2907	4.9	7.2	40.6	44.8	46.7	TonB-dependent receptor domain protein {Shewanella oneidensis MR-1} MW: 95761.02 pI: 4.54
SO2929	12.1	12.1	36.9	44.5	48.5	hypothetical protein {Shewanella oneidensis MR-1} MW: 40937.71 pI: 8.18
SO3090	11.4	11.4	11.4	15.8	15.8	MoxR domain protein {Shewanella oneidensis MR-1} MW: 35336.68 pI: 5.25
SO3193	7.4	3.7	21.4	31.5	34.0	polysaccharide biosynthesis protein {Shewanella oneidensis MR-1} MW:100375.80 pI: 5.65
SO3207	10.8	8.4	8.4	8.4	13.2	chemotaxis protein {Shewanella oneidensis MR-1} MW: 80821.75 pI: 4.75
SO3237	26.8	18.8	43.4	51.8	54.4	flagellin {Shewanella oneidensis MR-1} MW: 28467.97 pI: 7.90
SO3238	33.0	33.0	51.3	48.7	51.3	flagellin {Shewanella oneidensis MR-1} MW: 28674.21 pI: 7.94
SO3247	3.3	3.3	7.3	6.8	10.8	flagellar hook protein FlgE (flgE) {Shewanella oneidensis MR-1} MW: 47179.92 pI: 4.54
SO3293	64.3	55.1	28.7	15.4	66.4	inosine-5-monophosphate dehydrogenase (guaB) {Shewanella oneidensis MR-1} MW: 51684.67 pI: 6.45
SO3310	47.6	37.4	75.7	65.5	75.7	conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 22275.32 pI: 4.87
SO3417	22.5	30.6	22.5	22.5	30.6	peptidyl-prolyl cis-trans isomerase SlyD (slyD) {Shewanella oneidensis MR-1} MW: 23490.85 pI: 5.01
SO3430	45.9	42.6	38.7	42.0	51.0	recA protein (recA) {Shewanella oneidensis MR-1} MW: 38072.71 pI: 5.13
SO3466	34.8	34.8	44.3	44.3	44.3	riboflavin synthase, beta subunit (ribH) {Shewanella oneidensis MR-1} MW: 16689.33 pI: 5.03
SO3483	9.5	9.5	14.4	14.4	21.4	HlyD family secretion protein {Shewanella oneidensis MR-1} MW: 39820.12 pI: 6.62
SO3537	22.7	17.0	22.7	22.7	22.7	ribosomal protein S20 (rpsT) {Shewanella oneidensis MR-1} MW: 9757.50 pI:11.86
SO3545	14.1	14.1	49.5	44.3	51.4	OmpA family protein {Shewanella oneidensis MR-1} MW: 40181.61 pI: 4.76
SO3637	13.1	14.5	12.9	10.6	22.8	survival protein surA (surA) {Shewanella oneidensis MR-1} MW: 48913.96 pI: 5.67
SO3652	61.2	51.5	50.5	29.1	61.2	ribosomal protein L21 (rplU) {Shewanella oneidensis MR-1} MW: 11345.22 pI:10.07
SO3733	11.6	9.5	23.7	25.6	26.8	hypothetical protein {Shewanella oneidensis MR-1} MW: 62799.39 pI: 4.92
SO3748	18.8	17.1	18.8	23.0	23.0	LysM domain protein {Shewanella oneidensis MR-1} MW: 33564.15 pI: 9.23
SO3765	31.4	28.8	63.8	62.9	63.8	conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 25389.56 pI: 6.38
SO3772	40.1	37.4	65.4	66.5	66.5	conserved hypothetical protein {Shewanella oneidensis MR-1} MW: 20154.98 pI: 5.77
SO3774	20.1	17.9	18.0	14.6	23.5	proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase, putative {Shewanella oneidensis MR-1} MW:115071.97 pI: 5.90
SO3811	20.2	20.2	47.9	47.9	47.9	lipoprotein, putative {Shewanella oneidensis MR-1} MW: 21120.34 pI: 6.75
SO3844	9.4	5.6	47.8	46.1	48.4	peptidase, M13 family {Shewanella oneidensis MR-1} MW: 77206.40 pI: 5.52
SO3896	36.3	41.2	72.9	75.3	78.6	outer membrane porin, putative {Shewanella oneidensis MR-1} MW: 39898.07 pI: 4.70
SO3904	10.3	11.7	54.3	53.8	58.2	outer membrane protein TolC (tolC) {Shewanella oneidensis MR-1} MW: 47677.48 pI: 5.38
SO3927	76.7	64.0	37.3	44.0	76.7	ribosomal protein L9 (rplI) {Shewanella oneidensis MR-1} MW: 15662.03 pI: 5.51
SO3928	57.3	50.7	50.7	50.7	57.3	ribosomal protein S18 (rpsR) {Shewanella oneidensis MR-1} MW: 8845.31 pI:10.28
SO3930	63.4	68.7	50.4	50.4	68.7	ribosomal protein S6 (rpsF) {Shewanella oneidensis MR-1} MW: 15002.83 pI: 5.26
SO3939	51.5	51.5	34.6	46.2	51.5	ribosomal protein S9 (rpsI) {Shewanella oneidensis MR-1} MW: 14535.92 pI:11.39
SO3940	47.2	57.7	26.1	12.7	57.7	ribosomal protein L13 (rplM) {Shewanella oneidensis MR-1} MW: 15743.31 pI: 9.63
SO3942	31.3	26.0	25.3	21.8	33.8	serine protease, HtrA/DegQ/DegS family {Shewanella oneidensis MR-1} MW: 46550.63 pI: 5.95
SO4034	28.7	26.8	14.0	11.4	30.7	ATP-dependent RNA helicase DeaD (deaD) {Shewanella oneidensis MR-1} MW: 69382.27 pI: 8.95
SO4098	17.5	14.6	9.2	10.6	17.5	rod shape-determining protein MreB (mreB) {Shewanella oneidensis MR-1} MW: 37272.82 pI: 4.97
SO4105	60.2	45.6	60.2	49.7	60.2	MSHA pilin protein MshA (mshA) {Shewanella oneidensis MR-1} MW: 17656.36 pI: 5.75
SO4163	13.9	16.6	22.5	21.8	32.3	heat shock protein HslVU, ATPase subunit HslU (hslU) {Shewanella oneidensis MR-1} MW: 49800.28 pI: 5.29
SO4199	19.5	10.8	21.9	16.3	25.1	ubiquinone/menaquinone biosynthesis methlytransferase UbiE (ubiE) {Shewanella oneidensis MR-1} MW: 28065.31 pI: 7.11
SO4211	10.4	12.9	37.0	41.1	45.0	preprotein translocase, SecA subunit (secA) {Shewanella oneidensis MR-1} MW:102623.24 pI: 5.26
SO4320	14.6	17.8	27.2	28.9	32.1	agglutination protein (aggA) {Shewanella oneidensis MR-1} MW: 52343.46 pI: 5.17
SO4384	23.9	23.9	19.4	23.9	23.9	hypothetical protein {Shewanella oneidensis MR-1} MW: 27872.79 pI: 8.86
SO4586	16.1	17.3	31.6	37.5	43.9	cell division protein FtsY (ftsY) {Shewanella oneidensis MR-1} MW: 55476.91 pI: 4.93
SO4747	51.0	47.9	83.4	79.5	83.4	ATP synthase F1, beta subunit (atpD) {Shewanella oneidensis MR-1} MW: 49773.89 pI: 4.88
SO4748	40.6	34.3	70.3	63.3	70.3	ATP synthase F1, gamma subunit (atpG) {Shewanella oneidensis MR-1} MW: 31515.32 pI: 7.68
SO4749	42.3	33.7	66.9	70.8	70.8	ATP synthase F1, alpha subunit (atpA) {Shewanella oneidensis MR-1} MW: 55148.27 pI: 5.38
SO4751	23.1	21.8	67.3	67.3	67.3	ATP synthase F0, B subunit (atpF) {Shewanella oneidensis MR-1} MW: 17369.15 pI: 5.97
contam_gi\|136429\|sp\|P00761\|TRYP_PIG	23.8	27.3	23.8	23.8	27.3	Trypsin precursor MW: 24409.68 pI: 7.00
148	X	X	X	X

Redundant Count	Nonredundant Count	Percent	control_crude_run1 2pep_def	control_crude_run2 2pep_def	control_memb_run1 2pep_def	control_memb_run2 2pep_def
148	148	18.5%	X	X	X	X
4	4	0.5%		X	X	X
13	13	1.6%	X		X	X
15	15	1.9%	X	X		X
12	12	1.5%	X	X	X
166	165	20.6%			X	X
1	1	0.1%	X		X
275	275	34.3%	X	X
39	39	4.9%				X
32	20	2.5%			X
61	41	5.1%		X
70	69	8.6%	X
836	802		533	495	363	384