Vibrio cholerae O1 biovar eltor str. N16961 chromosome I

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217561-217660 (1-100) 217661-217760 (101-200) 217761-217860 (201-300) 217861-217960 (301-400) 217961-218060 (401-500)
218061-218160 (501-600) [218161-218260 (601-700)] 218261-218360 (701-800) 218361-218460 (801-900) 218461-218560 (901-1000)
218561-218660 (1001-1100) 218661-218760 (1101-1200) 218761-218860 (1201-1300) 218861-218960 (1301-1400) 218961-219060 (1401-1500)
219061-219160 (1501-1600) 219161-219260 (1601-1700) 219261-219360 (1701-1800) 219361-219460 (1801-1900) 219461-219560 (1901-2000)
219561-219660 (2001-2100) 219661-219760 (2101-2200) 219761-219860 (2201-2300) 219861-219960 (2301-2400) 219961-220060 (2401-2500)
220061-220160 (2501-2600) 220161-220260 (2601-2700) 220261-220302 (2701-2742)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
218161 hypothetical VC0611 phosphoglucomutase/phosphomannomutase, putative
similar to GB:AE000657; identified by sequence similarity; putative
genbank 15640631 NP_230260.1 470 642814 644226
218162 hypothetical VC0612 cellobiose/cellodextrin-phosphorylase, putative
similar to PID:1575345; identified by sequence similarity; putative
genbank 15640632 NP_230261.1 801 644349 646754
218163 hypothetical VC0613 beta-N-acetylhexosaminidase
similar to PID:1698442; identified by sequence similarity; putative
genbank 15640633 NP_230262.1 637 646873 648786
218164 hypothetical VC0614 hypothetical protein
identified by Glimmer2; putative
genbank 15640634 NP_230263.1 325 648783 649760
218165 hypothetical VC0615 endoglucanase-related protein
similar to PID:1663519; identified by sequence similarity; putative
genbank 15640635 NP_230264.1 574 649664 651388
218166 hypothetical VC0616 peptide ABC transporter, ATP-binding protein
similar to GB:Pyro_h; identified by sequence similarity; putative
genbank 15640636 NP_230265.1 331 651445 652440
218167 hypothetical VC0617 peptide ABC transporter, ATP-binding protein
similar to GB:Pyro_h; identified by sequence similarity; putative
genbank 15640637 NP_230266.1 327 652483 653466
218168 hypothetical VC0618 peptide ABC transporter, permease protein
similar to GB:Pyro_h; identified by sequence similarity; putative
genbank 15640638 NP_230267.1 341 653469 654494
218169 hypothetical VC0619 peptide ABC transporter, permease protein
similar to GB:Pyro_h; identified by sequence similarity; putative
genbank 15640639 NP_230268.1 328 654497 655483
218170 hypothetical VC0620 peptide ABC transporter, periplasmic peptide-binding protein
similar to GB:Pyro_h; identified by sequence similarity; putative
genbank 15640640 NP_230269.1 556 655653 657323
218171 hypothetical VC0621 hypothetical protein
identified by Glimmer2; putative
genbank 15640641 NP_230270.1 129 657896 658285
218172 hypothetical VC0622 sensory box sensor histidine kinase/response regulator
similar to PID:939724; identified by sequence similarity; putative
genbank 15640642 NP_230271.1 1177 658234 661767
218173 hypothetical VC0623 hypothetical protein
identified by Glimmer2; putative
genbank 15640643 NP_230272.1 340 661831 662853
218174 hypothetical VC0624 hypothetical protein
identified by Glimmer2; putative
genbank 15640644 NP_230273.1 361 662926 664011
218175 hypothetical VC0625 hypothetical protein
identified by Glimmer2; putative
genbank 15640645 NP_230274.1 51 664048 664203
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
218176 hypothetical VC0626 glutamate-1-semialdehyde aminotransferase
catalyzes the formation of 5-aminolevulinate from (S)-4-amino-5-oxopentanoate
genbank 15640646 NP_230275.1 432 664265 665563
218177 hypothetical VC0627 hesB family protein
similar to GB:L42023 SP:P45344 PID:1008789 PID:1205952 PID:1221876; identified by sequence similarity; putative
genbank 15640647 NP_230276.1 113 665847 666188
218178 hypothetical VC0628 hypothetical protein
identified by Glimmer2; putative
genbank 15640648 NP_230277.1 366 666286 667386
218179 hypothetical VC0629 multidrug resistance protein, putative
similar to GB:U00096 PID:1736781 PID:1736784 PID:1788390 GB:U00096; identified by sequence similarity; putative
genbank 15640649 NP_230278.1 1073 667295 670516
218180 hypothetical VC0630 hypothetical protein
identified by Glimmer2; putative
genbank 15640650 NP_230279.1 433 670598 671899
218181 hypothetical VC0631 tyrosyl-tRNA synthetase
catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
genbank 15640651 NP_230280.1 395 672030 673217
218182 hypothetical VC0632 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
similar to GB:L42023 SP:P45161 PID:1007328 PID:1221461 PID:1205568; identified by sequence similarity; putative
genbank 15640652 NP_230281.1 487 673285 674748
218183 hypothetical VC0633 outer membrane protein OmpU
similar to PID:1658032; identified by sequence similarity; putative
genbank 15640653 NP_230282.1 350 674828 675880
218184 greA hypothetical VC0634 transcription elongation factor GreA
necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary comp
genbank 15640654 NP_230283.1 158 676405 676881
218185 hypothetical VC0635 hypothetical protein
identified by Glimmer2; putative
genbank 15640655 NP_230284.1 98 676958 677254
218186 hypothetical VC0636 cell division protein FtsJ
similar to GB:M83138 SP:P28692 GB:U01376 PID:146027 PID:606117; identified by sequence similarity; putative
genbank 15640656 NP_230285.1 209 677374 678003
218187 hypothetical VC0637 cell division protein FtsH
similar to GB:M83138 SP:P28691 GB:U01376 PID:146028 PID:606116; identified by sequence similarity; putative
genbank 15640657 NP_230286.1 651 678104 680059
218188 hypothetical VC0638 dihydropteroate synthase
similar to GB:L06494 SP:P26282 GB:U01376 GB:X68776 GB:X68777; identified by sequence similarity; putative
genbank 15640658 NP_230287.1 278 680126 680962
218189 hypothetical VC0639 phosphoglucomutase/phosphomannomutase family protein MrsA
similar to GB:L12968 SP:P31120 GB:U01376 PID:290443 PID:606114; identified by sequence similarity; putative
genbank 15640659 NP_230288.1 446 680988 682328
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
218190 hypothetical VC0640 translocase
similar to GB:D16463 SP:P33582 GB:U01376 PID:431135 PID:606113; identified by sequence similarity; putative
genbank 15640660 NP_230289.1 111 682585 682920
218191 hypothetical VC0641 hypothetical protein
identified by Glimmer2; putative
genbank 15640661 NP_230290.1 151 683351 683806
218192 hypothetical VC0642 transcription elongation factor NusA
binds to RNA polymerase and RNA; stimulates rho independent termination by promoting hairpin formation; also interacts with N protein and prevents hairpin formation, thereby preventing termination
genbank 15640662 NP_230291.1 495 683825 685312
218193 infB hypothetical VC0643 translation initiation factor IF-2
Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
genbank 15640663 NP_230292.1 898 685337 688033
218194 hypothetical VC0644 ribosome-binding factor A
Associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA
genbank 15640664 NP_230293.1 136 688123 688533
218195 truB hypothetical VC0645 tRNA pseudouridine synthase B
catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
genbank 15640665 NP_230294.1 312 688533 689471
218196 hypothetical VC0646 30S ribosomal protein S15
binds to the 16S ribosomal RNA
genbank 15640666 NP_230295.1 89 689613 689882
218197 hypothetical VC0647 polyribonucleotide nucleotidyltransferase
similar to GB:J02638 SP:P05055 GB:M14425 GB:X00761 PID:147749; identified by sequence similarity; putative
genbank 15640667 NP_230296.1 709 690245 692374
218198 hypothetical VC0648 hypothetical protein
identified by Glimmer2; putative
genbank 15640668 NP_230297.1 303 692490 693401
218199 hypothetical VC0649 transcriptional regulator, MarR family
similar to GB:U03842 SP:P40676 PID:438375; identified by sequence similarity; putative
genbank 15640669 NP_230298.1 139 693488 693907
218200 hypothetical VC0650 hypothetical protein
identified by Glimmer2; putative
genbank 15640670 NP_230299.1 445 693954 695291
218201 hypothetical VC0651 hypothetical protein
identified by Glimmer2; putative
genbank 15640671 NP_230300.1 321 695344 696309
218202 hypothetical VC0652 protease, putative
similar to SP:P45527 PID:606098 GB:U00096 PID:1789548; identified by sequence similarity; putative
genbank 15640672 NP_230301.1 337 696234 697247
218203 hypothetical VC0653 c-di-GMP phosphodiesterase A-related protein
similar to GP:3659618; identified by sequence similarity; putative
genbank 15640673 NP_230302.1 684 697355 699409
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
218204 hypothetical VC0654 hypothetical protein
identified by Glimmer2; putative
genbank 15640674 NP_230303.1 175 699642 700169
218205 hypothetical VC0655 acetyltransferase, putative
similar to SP:P45473 PID:606096 GB:U00096 PID:1789546; identified by sequence similarity; putative
genbank 15640675 NP_230304.1 183 700105 700656
218206 hypothetical VC0656 DNA polymerase III subunit psi
with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB
genbank 15640676 NP_230305.1 135 700767 701174
218207 hypothetical VC0657 ribosomal-protein-alanine acetyltransferase
similar to GB:L42023 SP:P44305 PID:1004120 PID:1221913 PID:1204268; identified by sequence similarity; putative
genbank 15640677 NP_230306.1 161 701135 701620
218208 hypothetical VC0658 c-di-GMP phosphodiesterase A-related protein
similar to GP:3659614; identified by sequence similarity; putative
genbank 15640678 NP_230307.1 685 701609 703666
218209 hypothetical VC0659 peptide chain release factor 3
Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2
genbank 15640679 NP_230308.1 531 703870 705465
218210 hypothetical VC0660 ATP-dependent RNA helicase SrmB
similar to GB:D13169 SP:P21507 GB:X14152 PID:285777 PID:42996; identified by sequence similarity; putative
genbank 15640680 NP_230309.1 423 705587 706858
218211 hypothetical VC0661 hypothetical protein
identified by Glimmer2; putative
genbank 15640681 NP_230310.1 240 706946 707668
218212 hypothetical VC0662 branched chain amino acid transport system II carrier protein
similar to SP:P19072 GB:X51634 PID:45302; identified by sequence similarity; putative
genbank 15640682 NP_230311.1 437 707977 709290
218213 prfB hypothetical VC0663 peptide chain release factor 2 genbank 15642771 NP_230312.1 365 709536 710558
218214 lysS hypothetical VC0664 lysyl-tRNA synthetase
catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
genbank 15640683 NP_230313.1 512 710583 712121
218215 hypothetical VC0665 sigma-54 dependent transcriptional regulator
similar to GP:3236438; identified by sequence similarity; putative
genbank 15640684 NP_230314.1 444 712395 713729
218216 hypothetical VC0666 hypothetical protein
identified by Glimmer2; putative
genbank 15640685 NP_230315.1 104 714244 714558
218217 hypothetical VC0667 oxidoreductase Tas, aldo/keto reductase family
similar to PID:882727 GB:U00096 PID:1789199 PID:2342573; identified by sequence similarity; putative
genbank 15640686 NP_230316.1 352 714596 715654
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
218218 hypothetical VC0668 DNA mismatch repair protein
MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair
genbank 15640687 NP_230317.1 221 715847 716512
218219 hypothetical VC0669 hypothetical protein
identified by Glimmer2; putative
genbank 15640688 NP_230318.1 30 716899 716991
218220 hypothetical VC0670 hypothetical protein
identified by Glimmer2; putative
genbank 15640689 NP_230319.1 48 716974 717120
218221 hypothetical VC0671 dinucleoside polyphosphate hydrolase
Hydrolyzes diadenosine polyphosphate
genbank 15640690 NP_230320.1 193 717080 717661
218222 hypothetical VC0672 phosphoenolpyruvate-protein phosphotransferase
similar to PID:882722 GB:U00096 PID:1255724 PID:1789193; identified by sequence similarity; putative
genbank 15640691 NP_230321.1 748 717664 719910
218223 hypothetical VC0673 hypothetical protein
identified by Glimmer2; putative
genbank 15640692 NP_230322.1 264 719920 720714
218224 hypothetical VC0674 prolipoprotein diacylglyceryl transferase
transfers the N-acyl diglyceride moiety to the prostepctive N-terminalcysteine in prolipoprotein
genbank 15640693 NP_230323.1 271 720743 721558
218225 hypothetical VC0675 thymidylate synthase
catalyzes the formation of dihydrofolate from 5,10-methylenetetrahydrofolate
genbank 15640694 NP_230324.1 283 721568 722419
218226 hypothetical VC0676 nptA protein
similar to GP:3646477; identified by sequence similarity; putative
genbank 15640695 NP_230325.1 382 722512 723660
218227 hypothetical VC0677 transcriptional activator protein NhaR
similar to GB:X66866 PID:403331 SP:P52692; identified by sequence similarity; putative
genbank 15640696 NP_230326.1 296 724055 724945
218228 hypothetical VC0678 transcriptional activator HlyU
similar to GB:X66866 PID:403332 SP:P52695; identified by sequence similarity; putative
genbank 15640697 NP_230327.1 108 725144 725470
218229 rpsT hypothetical VC0679 30S ribosomal protein S20
binds directly to the 16S ribosomal RNA
genbank 15640698 NP_230328.1 86 725539 725799
218230 hypothetical VC0680 MviN protein
similar to GP:2631999; identified by sequence similarity; putative
genbank 15640699 NP_230329.1 525 726042 727619
218231 hypothetical VC0681 hypothetical protein
similar to GB:U00096 PID:1786208; identified by sequence similarity; putative
genbank 15640700 NP_230330.1 322 727688 728656
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
218232 hypothetical VC0682 isoleucyl-tRNA synthetase
catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)
genbank 15640701 NP_230331.1 949 728687 731536
218233 lspA hypothetical VC0683 signal peptidase II
lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
genbank 15640702 NP_230332.1 171 731552 732067
218234 hypothetical VC0684 peptidyl-prolyl cis-trans isomerase, FKBP-type
similar to GB:D10483 SP:P22563 GB:X54945 PID:216455 PID:41932; identified by sequence similarity; putative
genbank 15640703 NP_230333.1 144 732230 732664
218235 hypothetical VC0685 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
catalzes the conversion 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate
genbank 15640704 NP_230334.1 320 732699 733661
218236 hypothetical VC0686 hypothetical protein
identified by Glimmer2; putative
genbank 15640705 NP_230335.1 31 733692 733787
218237 hypothetical VC0687 carbon starvation protein A, putative
similar to GP:3212213; identified by sequence similarity; putative
genbank 15640706 NP_230336.1 494 733798 735282
218238 hypothetical VC0688 hypothetical protein
identified by Glimmer2; putative
genbank 15640707 NP_230337.1 113 735535 735876
218239 hypothetical VC0689 hypothetical protein
identified by Glimmer2; putative
genbank 15640708 NP_230338.1 599 735892 737691
218240 hypothetical VC0690 hypothetical protein
similar to GB:L42023 SP:P44862 PID:1005714 PID:1220845 PID:1205002; identified by sequence similarity; putative
genbank 15640709 NP_230339.1 307 737715 738638
218241 hypothetical VC0691 hypothetical protein
identified by Glimmer2; putative
genbank 15640710 NP_230340.1 370 738656 739768
218242 hypothetical VC0692 beta-hexosaminidase
hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides
genbank 15640711 NP_230341.1 330 739874 740866
218243 hypothetical VC0693 response regulator
similar to SP:P33356 PID:405856 GB:U00096 PID:2367130; identified by sequence similarity; putative
genbank 15640712 NP_230342.1 237 740893 741606
218244 hypothetical VC0694 hypothetical protein
identified by Glimmer2; putative
genbank 15640713 NP_230343.1 558 741616 743292
218245 hypothetical VC0695 3-deoxy-7-phosphoheptulonate synthase
catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate
genbank 15640714 NP_230344.1 357 743534 744607
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
218246 hypothetical VC0696 chorismate mutase/prephenate dehydrogenase
similar to SP:Q02287 GB:M74135 GB:X60420 PID:415010 PID:43345; identified by sequence similarity; putative
genbank 15640715 NP_230345.1 375 744620 745747
218247 hypothetical VC0697 hypothetical protein
identified by Glimmer2; putative
genbank 15640716 NP_230346.1 143 745814 746245
218248 hypothetical VC0698 ABC transporter, ATP-binding protein
similar to GB:L42023 SP:P45127 PID:1007176 PID:1221381 PID:1205493; identified by sequence similarity; putative
genbank 15640717 NP_230347.1 555 746356 748023
218249 hypothetical VC0699 hypothetical protein
identified by Glimmer2; putative
genbank 15640718 NP_230348.1 31 748208 748303
218250 hypothetical VC0700 soluble lytic murein transglycosylase
similar to GB:U14003 SP:P03810 GB:M69185 PID:147836 PID:537232; identified by sequence similarity; putative
genbank 15640719 NP_230349.1 648 748385 750331
218251 hypothetical VC0701 Trp operon repressor
When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription
genbank 15640720 NP_230350.1 118 750341 750697
218252 hypothetical VC0702 hypothetical protein
identified by Glimmer2; putative
genbank 15640721 NP_230351.1 183 750775 751326
218253 hypothetical VC0703 c-di-GMP phosphodiesterase A-related protein
similar to GP:3659618; identified by sequence similarity; putative
genbank 15640722 NP_230352.1 791 751247 753622
218254 hypothetical VC0704 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative
similar to GB:M93239 SP:P31133 PID:147334 GB:U00096 PID:1651387; identified by sequence similarity; putative
genbank 15640723 NP_230353.1 359 753606 754685
218255 hypothetical VC0705 chorismate mutase/prephenate dehydratase
similar to GB:L42023 SP:P43900 PID:1006481 PID:1221267 PID:1205390; identified by sequence similarity; putative
genbank 15640724 NP_230354.1 391 754828 756003
218256 hypothetical VC0706 sigma-54 modulation protein, putative
similar to SP:P11285 PID:147173 PID:147179 PID:1246515 GB:U00096; identified by sequence similarity; putative
genbank 15640725 NP_230355.1 108 756243 756569
218257 hypothetical VC0707 hypothetical protein
identified by Glimmer2; putative
genbank 15640726 NP_230356.1 42 756848 756976
218258 hypothetical VC0708 hypothetical protein
identified by Glimmer2; putative
genbank 15640727 NP_230357.1 253 756971 757732
218259 hypothetical VC0709 ribosomal large subunit pseudouridine synthase D
similar to SP:P33643 PID:1236631 GB:U00096 PID:1788946; identified by sequence similarity; putative
genbank 15640728 NP_230358.1 324 757851 758825
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
218260 hypothetical VC0710 hypothetical protein
identified by Glimmer2; putative
genbank 15640729 NP_230359.1 240 758828 759550


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