Xylella fastidiosa 9a5c

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178039-178138 (1-100) 178139-178238 (101-200) 178239-178338 (201-300) [178339-178438 (301-400)] 178439-178538 (401-500)
178539-178638 (501-600) 178639-178738 (601-700) 178739-178838 (701-800) 178839-178938 (801-900) 178939-179038 (901-1000)
179039-179138 (1001-1100) 179139-179238 (1101-1200) 179239-179338 (1201-1300) 179339-179438 (1301-1400) 179439-179538 (1401-1500)
179539-179638 (1501-1600) 179639-179738 (1601-1700) 179739-179838 (1701-1800) 179839-179938 (1801-1900) 179939-180038 (1901-2000)
180039-180138 (2001-2100) 180139-180238 (2101-2200) 180239-180338 (2201-2300) 180339-180438 (2301-2400) 180439-180538 (2401-2500)
180539-180638 (2501-2600) 180639-180738 (2601-2700) 180739-180804 (2701-2766)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178339 hypothetical XF0303 triosephosphate isomerase
In the reaction catalyzed by triosephosphate isomerase, the three carbon ketone sugar dihydroxyacetone phosphate is rearranged (i.e. isomerized) to the three carbon aldehyde sugar, glyceraldehyde-3-phosphate. Under intracellular conditions, the reaction is
genbank 15836906 NP_297594.1 249 317821 318570
178340 hypothetical XF0304 protein-export membrane protein
similar to SP|P44713 (percent identity: 43 %/query alignment coverage: 86.4 %/subject alignment coverage: 101.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836907 NP_297595.1 132 318612 319010
178341 hypothetical XF0305 NADH dehydrogenase alpha subunit
Catalyzes the transfer of electrons from NADH to ubiquinone
genbank 15836908 NP_297596.1 135 319215 319622
178342 hypothetical XF0306 NADH dehydrogenase beta subunit
The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
genbank 15836909 NP_297597.1 191 319592 320167
178343 hypothetical XF0307 NADH dehydrogenase subunit C
Catalyzes the transfer of electrons from NADH to ubiquinone
genbank 15836910 NP_297598.1 250 320219 320971
178344 hypothetical XF0308 NADH dehydrogenase delta subunit
Catalyzes the transfer of electrons from NADH to ubiquinone
genbank 15836911 NP_297599.1 435 320968 322275
178345 hypothetical XF0309 ATP synthase subunit E
Produces ATP from ADP in the presence of a proton gradient across the membrane. Rotates with gamma and delta subunits in a cylinder formed of alternating alpha and beta subunits
genbank 15836912 NP_297600.1 175 322272 322799
178346 hypothetical XF0310 NADH-ubiquinone oxidoreductase, NQO1 subunit
similar to GI|3860683 (percent identity: 53 %/query alignment coverage: 92.8 %/subject alignment coverage: 97.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836913 NP_297601.1 444 322804 324138
178347 hypothetical XF0311 NADH dehydrogenase gamma subunit
Catalyzes the transfer of electrons from NADH to ubiquinone
genbank 15836914 NP_297602.1 744 324135 326369
178348 hypothetical XF0312 NADH dehydrogenase subunit H
Catalyzes the transfer of electrons from NADH to ubiquinone
genbank 15836915 NP_297603.1 330 326465 327457
178349 hypothetical XF0313 NADH dehydrogenase subunit I
Catalyzes the transfer of electrons from NADH to ubiquinone
genbank 15836916 NP_297604.1 163 327458 327949
178350 hypothetical XF0314 NADH dehydrogenase subunit J
Catalyzes the transfer of electrons from NADH to ubiquinone
genbank 15836917 NP_297605.1 222 327954 328622
178351 hypothetical XF0315 NADH dehydrogenase kappa subunit
Catalyzes the transfer of electrons from NADH to ubiquinone
genbank 15836918 NP_297606.1 101 328619 328924
178352 hypothetical XF0316 NADH-ubiquinone oxidoreductase NQ012 subunit
similar to SP|P29924 (percent identity: 42 %/query alignment coverage: 104.5 %/subject alignment coverage: 106.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836919 NP_297607.1 713 328932 331073
178353 hypothetical XF0317 NADH dehydrogenase subunit M
Catalyzes the transfer of electrons from NADH to ubiquinone
genbank 15836920 NP_297608.1 501 331095 332600
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178354 hypothetical XF0318 NADH dehydrogenase subunit N
Catalyzes the transfer of electrons from NADH to ubiquinone
genbank 15836921 NP_297609.1 485 332635 334092
178355 hypothetical XF0319 acetoacetyl-CoA reductase
Converts (R)-3-hydroxyacyl-CoA to 3-oxoacyl-CoA
genbank 15836922 NP_297610.1 246 334769 335509
178356 hypothetical XF0320 Mg++/citrate complex transporter
similar to SP|P42308 (percent identity: 60 %/query alignment coverage: 95.2 %/subject alignment coverage: 102.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 77747498 NP_297611.2 443 335568 336899
178357 hypothetical XF0321 porin O precursor
similar to SP|P32977 (percent identity: 23 %/query alignment coverage: 102.8 %/subject alignment coverage: 93.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836924 NP_297612.1 398 337032 338228
178358 hypothetical XF0322 two-component system, regulatory protein
similar to SP|P22104 (percent identity: 45 %/query alignment coverage: 94.8 %/subject alignment coverage: 97.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -57
genbank 15836925 NP_297613.1 231 338428 339123
178359 hypothetical XF0323 two-component system, sensor protein
similar to GI|2961075 (percent identity: 31 %/query alignment coverage: 86.7 %/subject alignment coverage: 90.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836926 NP_297614.1 460 339107 340489
178360 hypothetical XF0324 periplasmic iron-binding protein
similar to GI|3776222 (percent identity: 24 %/query alignment coverage: 87.3 %/subject alignment coverage: 86.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 81
genbank 77747499 NP_297615.2 346 340489 341529
178361 hypothetical XF0325 transposase OrfA
similar to GI|6176523 (percent identity: 64 %/query alignment coverage: 64.4 %/subject alignment coverage: 30.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836928 NP_297616.1 104 341646 341960
178362 hypothetical XF0327 hypothetical protein genbank 15836929 NP_297617.1 53 343099 343260
178363 hypothetical XF0328 hypothetical protein genbank 15836930 NP_297618.1 128 343458 343844
178364 hypothetical XF0329 hypothetical protein genbank 15836931 NP_297619.1 34 343885 343989
178365 hypothetical XF0330 hypothetical protein genbank 15836932 NP_297620.1 194 344131 344715
178366 hypothetical XF0331 hypothetical protein genbank 15836933 NP_297621.1 151 344700 345155
178367 hypothetical XF0332 hypothetical protein genbank 15836934 NP_297622.1 36 345344 345454
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178368 hypothetical XF0333 hypothetical protein genbank 15836935 NP_297623.1 36 345727 345837
178369 hypothetical XF0334 hypothetical protein genbank 15836936 NP_297624.1 60 345863 346045
178370 hypothetical XF0335 hypothetical protein genbank 15836937 NP_297625.1 66 346026 346226
178371 hypothetical XF0336 hypothetical protein genbank 15836938 NP_297626.1 58 346223 346399
178372 hypothetical XF0337 hypothetical protein genbank 15836939 NP_297627.1 36 346387 346497
178373 hypothetical XF0338 hypothetical protein
similar to SP|P44470 (percent identity: 49 %/query alignment coverage: 98.1 %/subject alignment coverage: 100.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836940 NP_297628.1 158 346772 347248
178374 hypothetical XF0339 hypothetical protein
similar to SP|P06129 (percent identity: 35 %/query alignment coverage: 19.4 %/subject alignment coverage: 29.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836941 NP_297629.1 927 347467 350250
178375 hypothetical XF0340 disulfide bond formation protein B
disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein
genbank 15836942 NP_297630.1 173 350618 351139
178376 hypothetical XF0341 hypothetical protein genbank 15836943 NP_297631.1 31 351338 351433
178377 hypothetical XF0342 hypothetical protein genbank 15836944 NP_297632.1 62 351572 351760
178378 hypothetical XF0343 outer membrane protein
similar to GI|4104020 (percent identity: 31 %/query alignment coverage: 98.7 %/subject alignment coverage: 110.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836945 NP_297633.1 389 352099 353268
178379 hypothetical XF0344 hypothetical protein genbank 15836946 NP_297634.1 34 353360 353464
178380 hypothetical XF0345 hypothetical protein genbank 15836947 NP_297635.1 77 353543 353776
178381 hypothetical XF0346 hypothetical protein genbank 15836948 NP_297636.1 34 354295 354399
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178382 hypothetical XF0347 D-lactate dehydrogenase
similar to GI|2984066 (percent identity: 38 %/query alignment coverage: 99.8 %/subject alignment coverage: 95.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836949 NP_297637.1 461 355141 356526
178383 hypothetical XF0348 hypothetical protein genbank 15836950 NP_297638.1 50 356842 356994
178384 hypothetical XF0349 hypothetical protein genbank 15836951 NP_297639.1 57 357037 357210
178385 hypothetical XF0350 hypothetical protein genbank 15836952 NP_297640.1 31 357217 357312
178386 hypothetical XF0351 hypothetical protein genbank 15836953 NP_297641.1 74 357360 357584
178387 hypothetical XF0352 pentaphosphate guanosine-3'-pyrophosphohydrolase
similar to SP|P17580 (percent identity: 47 %/query alignment coverage: 93.7 %/subject alignment coverage: 98.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836954 NP_297642.1 735 357824 360031
178388 hypothetical XF0353 translation initiation inhibitor
similar to SP|P40431 (percent identity: 54 %/query alignment coverage: 99.2 %/subject alignment coverage: 99.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 180
genbank 15836955 NP_297643.1 127 360245 360628
178389 hypothetical XF0354 ATP-dependent DNA helicase
similar to SP|P24230 (percent identity: 55 %/query alignment coverage: 97.8 %/subject alignment coverage: 101.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836956 NP_297644.1 718 360636 362792
178390 hypothetical XF0355 hypothetical protein genbank 15836957 NP_297645.1 48 362867 363013
178391 hypothetical XF0356 cytochrome P-450 hydroxylase
similar to GI|4753860 (percent identity: 37 %/query alignment coverage: 93.0 %/subject alignment coverage: 90.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836958 NP_297646.1 400 363376 364578
178392 hypothetical XF0357 hypothetical protein genbank 15836959 NP_297647.1 387 365164 366327
178393 hypothetical XF0358 hypothetical protein genbank 15836960 NP_297648.1 385 367442 368599
178394 hypothetical XF0359 hypothetical protein genbank 15836961 NP_297649.1 60 369020 369202
178395 hypothetical XF0360 hypothetical protein genbank 15836962 NP_297650.1 37 369172 369285
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178396 hypothetical XF0361 replicative DNA helicase
unwinds double stranded DNA
genbank 15836963 NP_297651.1 471 369297 370712
178397 hypothetical XF0362 hypothetical protein genbank 15836964 NP_297652.1 107 370914 371237
178398 hypothetical XF0363 hypothetical protein
similar to SP|P37665 (percent identity: 40 %/query alignment coverage: 95.0 %/subject alignment coverage: 105.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836965 NP_297653.1 242 371375 372103
178399 hypothetical XF0364 hypothetical protein genbank 15836966 NP_297654.1 90 372111 372383
178400 hypothetical XF0365 hypothetical protein genbank 15836967 NP_297655.1 67 372813 373016
178401 hypothetical XF0366 ribokinase
similar to SP|P05054 (percent identity: 38 %/query alignment coverage: 98.1 %/subject alignment coverage: 100.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836968 NP_297656.1 317 373267 374220
178402 hypothetical XF0367 voltage-gated potassium channel beta subunit
similar to GI|2832783 (percent identity: 50 %/query alignment coverage: 83.5 %/subject alignment coverage: 98.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836969 NP_297657.1 387 374531 375694
178403 hypothetical XF0368 penicillin binding protein 1A
similar to SP|P02918 (percent identity: 39 %/query alignment coverage: 97.8 %/subject alignment coverage: 95.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836970 NP_297658.1 831 375998 378493
178404 hypothetical XF0369 fimbrial assembly membrane protein
similar to GI|895925 (percent identity: 61 %/query alignment coverage: 89.5 %/subject alignment coverage: 99.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -15
genbank 15836971 NP_297659.1 392 378548 379726
178405 hypothetical XF0370 fimbrial assembly membrane protein
similar to GI|530857 (percent identity: 44 %/query alignment coverage: 76.4 %/subject alignment coverage: 84.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836972 NP_297660.1 220 379726 380388
178406 hypothetical XF0371 fimbrial assembly membrane protein
similar to GI|455331 (percent identity: 43 %/query alignment coverage: 87.8 %/subject alignment coverage: 94.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 3
genbank 15836973 NP_297661.1 222 380388 381056
178407 hypothetical XF0372 fimbrial assembly protein
similar to GI|530859 (percent identity: 38 %/query alignment coverage: 98.3 %/subject alignment coverage: 99.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836974 NP_297662.1 176 381053 381583
178408 hypothetical XF0373 fimbrial assembly protein
similar to SP|P34750 (percent identity: 34 %/query alignment coverage: 92.5 %/subject alignment coverage: 82.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 39
genbank 15836975 NP_297663.1 637 381583 383496
178409 hypothetical XF0374 hypothetical protein genbank 15836976 NP_297664.1 255 384864 385631
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178410 hypothetical XF0375 inner membrane protein
similar to SP|P30845 (percent identity: 36 %/query alignment coverage: 98.0 %/subject alignment coverage: 98.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836977 NP_297665.1 552 385628 387286
178411 hypothetical XF0376 hypothetical protein genbank 15836978 NP_297666.1 53 387598 387759
178412 hypothetical XF0377 cytochrome P450-like enzyme
similar to SP|P53554 (percent identity: 37 %/query alignment coverage: 94.3 %/subject alignment coverage: 95.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -108
genbank 15836979 NP_297667.1 402 387900 389108
178413 hypothetical XF0378 thiamine-phosphate pyrophosphorylase
catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate
genbank 15836980 NP_297668.1 234 389990 390694
178414 hypothetical XF0379 rubredoxin
similar to SP|P42453 (percent identity: 54 %/query alignment coverage: 93.0 %/subject alignment coverage: 98.1 %); identified by sequence similarity; putative; ORF located manually
genbank 15836981 NP_297669.1 57 390696 390869
178415 hypothetical XF0380 hypothetical protein genbank 15836982 NP_297670.1 55 391003 391170
178416 hypothetical XF0381 ATP-dependent Clp protease subunit
similar to SP|P03815 (percent identity: 69 %/query alignment coverage: 99.5 %/subject alignment coverage: 100.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836983 NP_297671.1 861 391356 393941
178417 hypothetical XF0382 hypothetical protein genbank 15836984 NP_297672.1 60 394483 394665
178418 hypothetical XF0383 hypothetical protein genbank 15836985 NP_297673.1 159 394790 395269
178419 hypothetical XF0384 outer membrane hemin receptor
similar to GI|3044098 (percent identity: 22 %/query alignment coverage: 88.3 %/subject alignment coverage: 78.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836986 NP_297674.1 681 395356 397401
178420 hypothetical XF0385 hypothetical protein genbank 15836987 NP_297675.1 122 397940 398308
178421 hypothetical XF0386 hypothetical protein genbank 15836988 NP_297676.1 45 398796 398933
178422 hypothetical XF0387 hypothetical protein
similar to SP|P32695 (percent identity: 50 %/query alignment coverage: 96.8 %/subject alignment coverage: 99.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836989 NP_297677.1 340 399121 400143
178423 hypothetical XF0388 hypothetical protein genbank 15836990 NP_297678.1 123 400361 400732
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178424 hypothetical XF0389 two-component system, regulatory protein
similar to GI|2120818 (percent identity: 54 %/query alignment coverage: 100.0 %/subject alignment coverage: 101.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836991 NP_297679.1 227 400823 401506
178425 hypothetical XF0390 two-component system, sensor protein
similar to SP|P23837 (percent identity: 36 %/query alignment coverage: 61.0 %/subject alignment coverage: 60.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836992 NP_297680.1 482 401522 402970
178426 hypothetical XF0391 hypothetical protein genbank 15836993 NP_297681.1 85 403893 404150
178427 hypothetical XF0392 S-adenosylmethionine synthetase
methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP
genbank 15836994 NP_297682.1 403 404470 405681
178428 hypothetical XF0393 dinucleoside polyphosphate hydrolase
Hydrolyzes diadenosine polyphosphate
genbank 15836995 NP_297683.1 190 406080 406652
178429 hypothetical XF0394 hypothetical protein genbank 15836996 NP_297684.1 74 406755 406979
178430 hypothetical XF0395 bacterioferritin
similar to SP|P11056 (percent identity: 61 %/query alignment coverage: 100.0 %/subject alignment coverage: 97.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836997 NP_297685.1 154 407061 407525
178431 hypothetical XF0396 hypothetical protein genbank 15836998 NP_297686.1 93 407540 407821
178432 hypothetical XF0397 hypothetical protein genbank 15836999 NP_297687.1 137 408157 408570
178433 hypothetical XF0398 hypothetical protein genbank 15837000 NP_297688.1 194 408615 409199
178434 hypothetical XF0399 hypothetical protein genbank 15837001 NP_297689.1 64 409292 409486
178435 hypothetical XF0400 hypothetical protein genbank 15837002 NP_297690.1 131 409578 409973
178436 hypothetical XF0401 hypothetical protein
similar to SP|P45365 (percent identity: 26 %/query alignment coverage: 99.8 %/subject alignment coverage: 81.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15837003 NP_297691.1 566 409978 411678
178437 hypothetical XF0402 hypothetical protein genbank 15837004 NP_297692.1 79 412520 412759
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178438 hypothetical XF0403 hypothetical protein genbank 77747500 NP_297693.2 244 412605 413339


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