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Finding cDNAs
UGID:914594     UniGene Hs.523847     Homo sapiens (human)   IFI6 Order cDNA clone, Links
Interferon, alpha-inducible protein 6 (IFI6)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_075011.1 interferon, alpha-inducible protein 6 isoform c H. sapiens 100.0 137
NP_001009069.1 interferon, alpha-inducible protein P. troglodytes 100.0 129
NP_839973.1 trinucleotide repeat containing 18 isoform B M. musculus 91.0 78

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: blastocyst [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; brain; mammary gland; uterus; skin; testis; uncharacterized tissue; adrenal gland; embryonic tissue; pancreas; blood; stomach; mixed; eye; liver; bone; prostate; intestine; connective tissue; ovary; salivary gland; spleen; lung; kidney; cervix; heart
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p35
UniSTS entry: Chr 1 RH80818
UniSTS entry: Chr 1 PMC154027P1
UniSTS entry: Chr 1 PMC299790P5
UniSTS entry: Chr Y sY3084
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BT006850.1 Homo sapiens interferon, alpha-inducible protein (clone IFI-6-16) mRNA, complete cds P
NM_002038.3 Homo sapiens interferon, alpha-inducible protein 6 (IFI6), transcript variant 1, mRNA P
NM_022872.2 Homo sapiens interferon, alpha-inducible protein 6 (IFI6), transcript variant 2, mRNA P
NM_022873.2 Homo sapiens interferon, alpha-inducible protein 6 (IFI6), transcript variant 3, mRNA P
BC011601.2 Homo sapiens interferon, alpha-inducible protein 6, mRNA (cDNA clone MGC:1748 IMAGE:3140035), complete cds PA
BC015603.2 Homo sapiens interferon, alpha-inducible protein 6, mRNA (cDNA clone MGC:23426 IMAGE:4654295), complete cds PA
AK314488.1 Homo sapiens cDNA, FLJ95298, Homo sapiens interferon, alpha-inducible protein (clone IFI-6-16)(G1P3), transcript variant 2, mRNA P
AK024814.1 Homo sapiens cDNA: FLJ21161 fis, clone CAS10040, highly similar to CHPIMRF Pan troglodytes interferon-inducible mRNA fragment PA
X02492.1 Human interferon-inducible mRNA fragment (cDNA 6-16) P

EST sequences (262)

AA989193.1 Clone IMAGE:1594102 kidney 3' read A
AI054348.1 Clone IMAGE:1861236 ovary 3' read A
AA946562.1 Clone IMAGE:1589692 kidney 3' read
AI074207.1 Clone IMAGE:1681986 skin 3' read A
CB053706.1 Clone IMAGE:3290793 uncharacterized tissue 3' read A
AI085389.1 Clone IMAGE:1681702 skin 3' read PA
BX091394.1 Clone IMAGp998H01736_;_IMAGE:324912 skin P
AI189027.1 Clone IMAGE:1725396 placenta 3' read
AI189879.1 Clone IMAGE:1725101 placenta 3' read A
AI220986.1 Clone IMAGE:1758517 placenta 3' read A
AI269916.1 Clone IMAGE:1868014 kidney 3' read A
CB136354.1 Clone L5HLK1-30-E05 liver 5' read P
CB124292.1 Clone L5HLK1s1-21-G06 liver 5' read P
CB112693.1 Clone L6ChoCK0-6-D11 liver 5' read P
CB121516.1 Clone L6ChoCK0-16-D03 liver 5' read
CB136947.1 Clone L6ChoCK0-23-C10 liver 5' read P
CB127004.1 Clone C1SNU17-14-D02 cervix 5' read P
CB151563.1 Clone C1SNU17-36-B07 cervix 5' read P
AI200381.1 Clone IMAGE:1758049 placenta 3' read A
AI225032.1 Clone IMAGE:1998853 stomach 3' read PA
AI243211.1 Clone IMAGE:1846154 mixed 3' read PA
AI243651.1 Clone IMAGE:1854068 mixed 3' read
AI310375.1 Clone IMAGE:1913531 intestine 3' read A
AI357713.1 Clone IMAGE:1981879 kidney 3' read A
AI423385.1 Clone IMAGE:2104295 brain 3' read PA
AI452670.1 Clone IMAGE:2145495 mixed 3' read PA
AI494106.1 Clone IMAGE:2041986 uterus 3' read A
AI538929.1 Clone IMAGE:2205111 uterus 3' read A
AI660482.1 Clone IMAGE:2346191 intestine 3' read PA
AI742180.1 Clone IMAGE:2368473 mixed 3' read
AI742511.1 Clone IMAGE:2367904 mixed 3' read PA
AI801232.1 Clone IMAGE:2185176 stomach 3' read A
AI936905.1 Clone IMAGE:2467172 brain 3' read PA
AI640702.1 Clone IMAGE:2294142 pancreas 3' read
CB992380.1 Clone IMAGE:30337493 placenta 5' read P
CB995444.1 Clone IMAGE:30336374 placenta 5' read P
AI814517.1 Clone IMAGE:2408525 lung 3' read PA
CB996834.1 Clone IMAGE:30336133 placenta 5' read P
BX396875.2 Clone CS0DI025YN01 placenta 5' read P
BX382600.2 Clone CS0DI083YE12 placenta 5' read P
BX380557.2 Clone CS0DI054YF19 placenta 5' read P
AI873959.1 Clone IMAGE:2438652 uterus 3' read A
BX438893.2 Clone CS0DE003YH02 placenta 5' read P
CD050243.1 embryonic tissue 5' read P
CD050482.1 embryonic tissue 5' read P
CD050928.1 embryonic tissue 5' read P
CD051109.1 embryonic tissue 5' read P
CD051233.1 embryonic tissue 5' read P
CD050361.1 embryonic tissue 5' read P
BX442494.2 Clone CS0DF032YE23 brain 5' read
CD385296.1 embryonic tissue 5' read P
CD386237.1 embryonic tissue 5' read P
CD386973.1 embryonic tissue 5' read PA
CD387382.1 embryonic tissue 5' read P
CD387910.1 embryonic tissue 5' read P
CD388838.1 embryonic tissue 5' read P
CD389066.1 embryonic tissue 5' read P
CD389223.1 embryonic tissue 5' read P
CD389295.1 embryonic tissue 5' read PA
CD523272.1 Clone IMAGE:30410455 blood 5' read A
CD639980.1 Clone IMAGE:30414756 blood 5' read A
CD641311.1 Clone IMAGE:30415602 blood 5' read A
CD671420.1 Clone fg04d12 eye 5' read P
CF129140.1 Clone IMAGE:30556679 lung 5' read P
AW264972.1 Clone IMAGE:2754868 intestine 3' read
AW468034.1 Clone IMAGE:2920567 blood 3' read PA
CK300215.1 Clone UI-E-EJ1-ajx-o-23-0-UI eye 3' read A
AU077025.1 Clone WWWW0451 uncharacterized tissue 5' read
AW778890.1 Clone IMAGE:3037543 intestine 3' read PA
CK820234.1 Clone IMAGE:5678316 pancreas 5' read A
AW951085.1 uncharacterized tissue P
AW954451.1 uncharacterized tissue P
AW954452.1 uncharacterized tissue P
CV027591.1 mixed 5' read P
BP211482.1 Clone CBR00622 brain 5' read P
BE279198.1 Clone IMAGE:3140035 placenta 5' read PM
BP305060.1 Clone MPG03422 uncharacterized tissue 5' read P
BE281450.1 Clone IMAGE:3138427 placenta 5' read
BP320632.1 Clone PLR02791 placenta 5' read P
BP383468.1 Clone w0451 uncharacterized tissue 5' read P
BE378317.1 Clone IMAGE:3608389 uterus 5' read P
BE388394.1 Clone IMAGE:3607419 uterus 5' read M
CV397332.1 brain
CV416578.1 placenta
BE396081.1 Clone IMAGE:3659138 uterus 5' read PM
BE407364.1 Clone IMAGE:3630472 placenta 5' read PM
BE407716.1 Clone IMAGE:3629628 placenta 5' read PM
BE407925.1 Clone IMAGE:3629393 placenta 5' read PM
BE673239.1 Clone IMAGE:3248879 prostate 3' read A
H44162.1 Clone IMAGE:172637 brain 5' read P
BE732868.1 Clone IMAGE:3840166 placenta 5' read PM
BE887546.1 Clone IMAGE:3913321 uterus 5' read P
DN989919.1 Clone TC109251 brain 5' read P
DN990236.1 Clone TC109252 brain 5' read P
DN998091.1 Clone TC112388 mammary gland 5' read P
BE902313.1 Clone IMAGE:3959254 placenta 5' read P
BE902409.1 Clone IMAGE:3959243 placenta 5' read P
BE902809.1 Clone IMAGE:3958910 placenta 5' read P
D58614.1 Clone GEN-506D04 placenta 5' read P
AV733205.1 Clone cdAACD03 adrenal gland 5' read
AV737252.2 Clone CBUAJE12 blood 5' read A
BF107067.1 Clone IMAGE:4043454 placenta 5' read
CT000988.1 Clone RZPDp9017H1324 uncharacterized tissue 5' read P
T29036.1 blood 5' read
BF237663.1 Clone IMAGE:4079506 uterus 5' read P
DA170848.1 Clone BRAMY2032970 brain 5' read P
BF684297.1 Clone IMAGE:4302223 uterus 5' read P
DA105008.1 Clone BRACE3018698 brain 5' read P
DA106002.1 Clone BRACE3020140 brain 5' read P
DA121637.1 Clone BRACE3042840 brain 5' read P
DA404735.1 Clone BRTHA3009358 brain 5' read P
DB002376.1 Clone TBAES2004540 mammary gland 5' read P
DB003554.1 Clone TBAES2006059 mammary gland 5' read P
DA727386.1 Clone NT2RM1000070 testis 5' read P
DA727395.1 Clone NT2RM1000087 testis 5' read P
DA727451.1 Clone NT2RM1000220 testis 5' read P
DA727539.1 Clone NT2RM1000432 testis 5' read P
DA727639.1 Clone NT2RM1000710 testis 5' read P
DA727674.1 Clone NT2RM1000791 testis 5' read P
DA727743.1 Clone NT2RM1000937 testis 5' read P
DA727745.1 Clone NT2RM1000942 testis 5' read P
DA727756.1 Clone NT2RM1000971 testis 5' read P
DA846175.1 Clone PLACE6014554 placenta 5' read
DA702513.1 Clone NT2RI2005415 5' read P
DA702746.1 Clone NT2RI2005720 5' read P
DA847899.1 Clone PLACE6016829 placenta 5' read P
BF436615.1 Clone IMAGE:3645452 mammary gland 3' read A
DB007577.1 Clone TCERX2001159 cervix 5' read P
DA737781.1 Clone NT2RP4002098 testis 5' read P
DA861527.1 Clone PLACE7014295 placenta 5' read P
DA722710.1 Clone NT2RI3003571 testis 5' read P
DR980281.1 Clone ID_15986 placenta 3' read A
H83529.1 Clone IMAGE:249316 skin 5' read P
DB062279.1 Clone TESTI4002378 testis 5' read P
DB370401.1 Clone NT2RP4002098 testis 3' read A
H87569.1 Clone IMAGE:252495 placenta 5' read
DW407888.1 liver
DW453254.1 liver
BG015476.1 placenta
BF946483.1 brain
BF951614.1 brain P
BF951618.1 brain P
BF916581.1 uterus
DB500025.1 Clone H033075F23 brain 5' read P
DB484978.1 Clone H033005D22 brain 5' read P
DB503448.1 Clone H033087N23 brain 5' read P
DB571170.1 Clone H033075F23 brain 3' read A
DB574683.1 Clone H033087N23 brain 3' read
BG336311.1 Clone IMAGE:4542967 placenta 5' read P
N40613.1 Clone IMAGE:270058 skin 5' read P
BG435732.1 Clone IMAGE:4604096 placenta 5' read P
BG477513.1 Clone IMAGE:4640083 skin 5' read P
BG481063.1 Clone IMAGE:4652533 placenta 5' read P
BG481216.1 Clone IMAGE:4652098 placenta 5' read P
D78986.1 Clone GEN-528G01 placenta 5' read
BG491818.1 Clone IMAGE:4654295 skin 5' read
AU098533.1 Clone CAS10040 uncharacterized tissue 5' read
DT219640.1 brain P
BG621259.1 Clone IMAGE:4730635 placenta 5' read P
BG778075.1 Clone IMAGE:4805372 prostate 5' read P
BG823935.1 Clone IMAGE:4866988 intestine 5' read P
BI043706.1 ovary
BG716694.1 Clone IMAGE:4801075 brain 5' read P
BI549310.1 Clone IMAGE:5261435 brain 5' read P
BI838598.1 Clone IMAGE:5225250 mixed 5' read P
BI838689.1 Clone IMAGE:5225227 mixed 5' read P
BI838701.1 Clone IMAGE:5225231 mixed 5' read P
BM045966.1 Clone IMAGE:5451603 prostate 5' read P
BM142149.1 Clone IMAGE:5677461 pancreas 5' read
BM450072.1 Clone IMAGE:5528089 skin 5' read
BM458012.1 Clone IMAGE:5530350 uterus 5' read P
BM555726.1 Clone IMAGE:5470670 skin 5' read P
BM561842.1 Clone IMAGE:5484441 blood 5' read P
BM562144.1 Clone IMAGE:5480773 skin 5' read P
BM687283.1 Clone UI-E-CQ1-acz-f-02-0-UI brain 5' read P
W49674.1 Clone IMAGE:324912 skin 3' read A
W49768.1 Clone IMAGE:324912 skin 5' read P
BM768898.1 Clone S14K402-12-E05 stomach 5' read
BM807612.1 Clone IMAGE:5472069 skin 5' read
BM821748.1 Clone S20T665307-14-B07 stomach 5' read P
BM844507.1 Clone S13KMS5-36-G10 stomach 5' read
BM887830.1 eye 5' read P
BM915986.1 Clone IMAGE:5482273 skin 5' read P
BM916570.1 Clone IMAGE:5483013 skin 5' read P
BM916855.1 Clone IMAGE:5483333 skin 5' read P
W77739.1 Clone IMAGE:345891 heart 5' read P
BQ016129.1 Clone IMAGE:5887284 connective tissue 3' read PA
BQ022806.1 Clone UI-1-BB1p-axu-c-04-0-UI placenta 3' read A
BQ051477.1 Clone IMAGE:5932349 blood 5' read P
BQ053829.1 Clone IMAGE:5935731 blood 5' read P
BQ069669.1 Clone IMAGE:5921943 brain 5' read
BQ082859.1 Clone S14K402-58-C11 stomach 5' read P
BQ083495.1 Clone S14K402-65-B03 stomach 5' read P
BQ083787.1 Clone S14K402-62-H02 stomach 5' read P
BQ083980.1 Clone S14K402-74-C06 stomach 5' read P
BQ084021.1 Clone S14K402-74-G07 stomach 5' read P
BQ084463.1 Clone S14K402-77-D09 stomach 5' read
BQ188751.1 Clone UI-E-EJ1-ajx-o-23-0-UI eye 5' read A
BQ278658.1 Clone IMAGE:5805291 mammary gland 5' read P
BQ278820.1 Clone IMAGE:5805474 mammary gland 5' read P
BQ307144.1 mammary gland
BQ377998.1 uterus
BQ446294.1 Clone UI-H-EU1-azz-e-05-0-UI connective tissue 3' read PA
BQ575106.1 Clone UI-H-EZ1-bbd-l-07-0-UI bone 3' read PA
BQ575401.1 Clone UI-H-EZ1-bbe-j-24-0-UI bone 3' read PA
AA029363.1 Clone IMAGE:470350 uterus 5' read
BQ638359.1 Clone hd21f04 eye 5' read P
AA035315.1 Clone IMAGE:471461 uterus 5' read
BQ672985.1 Clone IMAGE:6212184 salivary gland 5' read P
BQ674304.1 Clone IMAGE:6277312 salivary gland 5' read P
BQ685638.1 Clone IMAGE:6251820 pancreas 5' read P
BQ686499.1 Clone IMAGE:6207904 pancreas 5' read P
BQ687506.1 Clone IMAGE:6251811 pancreas 5' read P
BQ688996.1 Clone IMAGE:6208147 pancreas 5' read P
BQ707765.1 Clone IMAGE:6277938 spleen 5' read P
BQ708005.1 Clone IMAGE:6278543 spleen 5' read A
BQ708664.1 Clone IMAGE:6277962 spleen 5' read P
BQ711980.1 Clone IMAGE:6215928 spleen 5' read A
BQ879260.1 Clone IMAGE:6210595 pancreas 5' read P
BQ897961.1 Clone IMAGE:6208523 pancreas 5' read P
BU187918.1 Clone IMAGE:6159002 skin 5' read P
BU187965.1 Clone IMAGE:6155069 uterus 5' read P
BU521168.1 Clone IMAGE:6527001 uterus 5' read P
BU542092.1 Clone IMAGE:6573896 prostate 5' read P
BU543086.1 Clone IMAGE:6575080 prostate 5' read P
BU196965.1 Clone IMAGE:6085326 pancreas 5' read A
BU197151.1 Clone IMAGE:6083104 pancreas 5' read P
BU535654.1 Clone IMAGE:6563345 mammary gland 5' read P
BU538495.1 Clone IMAGE:6569062 mammary gland 5' read P
BU538738.1 Clone IMAGE:6569335 mammary gland 5' read P
BU539165.1 Clone IMAGE:6569845 mammary gland 5' read P
C18815.1 Clone 568B01 placenta 5' read
BU557955.1 Clone IMAGE:6586176 mammary gland 5' read P
BU557984.1 Clone IMAGE:6586210 mammary gland 5' read P
BU615542.1 Clone UI-H-FG0-bcq-f-14-0-UI bone 3' read PA
BU625222.1 Clone UI-H-FG1-bgm-c-16-0-UI bone 3' read PA
BU626029.1 Clone UI-H-FG1-bgp-p-16-0-UI bone 3' read PA
BU623231.1 Clone UI-H-FL1-bgd-n-18-0-UI bone 3' read PA
AA233266.1 Clone IMAGE:668614 mixed 5' read P
BU856710.1 Clone IMAGE:6646468 mammary gland 5' read P
BU857413.1 Clone IMAGE:6647251 mammary gland 5' read P
BU943928.1 Clone IMAGE:6728125 mammary gland 5' read P
BU944072.1 Clone IMAGE:6728283 mammary gland 5' read P
AA243725.1 Clone IMAGE:668614 mixed 3' read A
BU955895.1 Clone IMAGE:6729352 mammary gland 5' read P
BU956163.1 Clone IMAGE:6729680 mammary gland 5' read P
BU957032.1 Clone IMAGE:6730980 mammary gland 5' read P
BU957775.1 Clone IMAGE:6731864 mammary gland 5' read P
CA306067.1 Clone UI-H-FT1-bhs-e-03-0-UI lung 3' read PA
CA307321.1 Clone UI-H-FT1-bhy-a-07-0-UI lung 3' read PA
CA412111.1 Clone UI-H-EZ0-bal-l-05-0-UI bone 3' read PA
CA439127.1 Clone UI-H-DI0-auu-n-02-0-UI lung 3' read PA
AA366048.1 pancreas 5' read P
AA367248.1 pancreas 5' read
AA380753.1 uncharacterized tissue 5' read P
AA432030.1 Clone IMAGE:782513 testis 5' read
AA448478.1 Clone IMAGE:782513 testis 3' read
AA550860.1 Clone IMAGE:999254 prostate
AA552539.1 Clone IMAGE:1013517 intestine 3' read A
AA575984.1 Clone IMAGE:1072276 mammary gland 3' read A
AA654124.1 Clone IMAGE:1192693 prostate 3' read A
AA856812.1 Clone IMAGE:1420355 intestine 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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