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Platform GPL7187 Query DataSets for GPL7187
Status Public on Jan 09, 2009
Title UW/FPL Postia placenta MAD-698 whole genome 37K expression array version 1
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism(s) Postia placenta
Manufacturer NimbleGen Systems Inc.
Manufacture protocol proprietary maskless array in situ oligonucleotide synthesis. See http://www.nimblegen.com/
 
Description The Platform data table reflects a condensed representation of the full array. The .ndf file is linked below as a supplementary file.
 
Submission date Aug 20, 2008
Contact name Dan Cullen
E-mail(s) dcullen@facstaff.wisc.edu
Phone 608-231-9468
Fax 608-231-9262
Organization name UW/FPL
Street address One Gifford Pinchot Dr
City Madison
State/province Wisconsin
ZIP/Postal code 53726
Country USA
 
Samples (6) GSM315311, GSM315312, GSM315313, GSM315314, GSM315315, GSM315316
Series (1)
GSE12540 Postia placenta MAD-698 gene expression in different media

Data table header descriptions
ID SEQ_ID
Best hit Blastp
Score
E-value
Protein ID Joint Genome Institute Protein Id
SPOT_ID

Data table
ID Best hit Blastp Score E-value Protein ID SPOT_ID
100000_fgenesh3_pg_36_28 gi|88938223|ref|ZP_01143710.1| hypothetical protein GuraDRAFT_4175 [Geobacter uraniumreducens Rf4] >gi|88915035|gb|EAR34369.1| hypothetical protein GuraDRAFT_4175 [Geobacter uraniumreducens Rf4] 743 0 100000 JGI ProteinID: 100000
100003_fgenesh3_pg_36_31 gi|116508939|gb|EAU91834.1| hypothetical protein CC1G_04601 [Coprinopsis cinerea okayama7#130] 666 0 100003 JGI ProteinID: 100003
100005_fgenesh3_pg_36_33 NO HITS FOUND 100005 JGI ProteinID: 100005
100006_fgenesh3_pg_36_34 NO HITS FOUND 100006 JGI ProteinID: 100006
100011_fgenesh3_pg_36_39 NO HITS FOUND 100011 JGI ProteinID: 100011
100013_fgenesh3_pg_36_41 gi|116506811|gb|EAU89706.1| predicted protein [Coprinopsis cinerea okayama7#130] 271 6.34E-16 100013 JGI ProteinID: 100013
100014_fgenesh3_pg_36_42 gi|116502533|gb|EAU85428.1| predicted protein [Coprinopsis cinerea okayama7#130] 119 2.01E-07 100014 JGI ProteinID: 100014
100019_fgenesh3_pg_36_47 NO HITS FOUND 100019 JGI ProteinID: 100019
100020_fgenesh3_pg_36_48 gi|116504992|gb|EAU87887.1| hypothetical protein CC1G_01534 [Coprinopsis cinerea okayama7#130] 633 0 100020 JGI ProteinID: 100020
100022_fgenesh3_pg_36_50 gi|116509088|gb|EAU91983.1| predicted protein [Coprinopsis cinerea okayama7#130] 379 9.15E-23 100022 JGI ProteinID: 100022
100023_fgenesh3_pg_36_51 NO HITS FOUND 100023 JGI ProteinID: 100023
100026_fgenesh3_pg_36_54 gi|116497644|gb|EAU80539.1| hypothetical protein CC1G_09936 [Coprinopsis cinerea okayama7#130] 612 0 100026 JGI ProteinID: 100026
100029_fgenesh3_pg_36_57 gi|71020051|ref|XP_760256.1| hypothetical protein UM04109.1 [Ustilago maydis 521] >gi|46099939|gb|EAK85172.1| hypothetical protein UM04109.1 [Ustilago maydis 521] 1179 0 100029 JGI ProteinID: 100029
100030_fgenesh3_pg_36_58 NO HITS FOUND 100030 JGI ProteinID: 100030
100032_fgenesh3_pg_36_60 NO HITS FOUND 100032 JGI ProteinID: 100032
100035_fgenesh3_pg_36_63 gi|71020051|ref|XP_760256.1| hypothetical protein UM04109.1 [Ustilago maydis 521] >gi|46099939|gb|EAK85172.1| hypothetical protein UM04109.1 [Ustilago maydis 521] 518 1.82E-44 100035 JGI ProteinID: 100035
100036_fgenesh3_pg_36_64 NO HITS FOUND 100036 JGI ProteinID: 100036
100037_fgenesh3_pg_36_65 gi|116498346|gb|EAU81241.1| predicted protein [Coprinopsis cinerea okayama7#130] 180 2.57E-06 100037 JGI ProteinID: 100037
100039_fgenesh3_pg_36_67 gi|116500936|gb|EAU83831.1| predicted protein [Coprinopsis cinerea okayama7#130] 167 0.00400171 100039 JGI ProteinID: 100039
100043_fgenesh3_pg_36_71 NO HITS FOUND 100043 JGI ProteinID: 100043

Total number of rows: 12438

Table truncated, full table size 1962 Kbytes.




Download family Format
SOFT formatted family file(s) SOFT
MINiML formatted family file(s) MINiML

Supplementary file Size Download File type/resource
GPL7187.ndf.gz 25.2 Mb (ftp)(http) NDF

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