R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|6671963|gb|AAF23222.1|AC013454_9 (AC013454) unknown protein [Arabidopsis
thaliana]
Length = 422
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | 422
0 150 300
Plus Strand HSPs:
Score = 742 (261.2 bits), Expect = 1.4e-72, P = 1.4e-72
Identities = 146/222 (65%), Positives = 166/222 (74%), Frame = +3
Query: 249 MVPIFLYIVAFICTCGAIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLV 428
++PI+L I+AF+CT GAIAL+L HIYKHLLNYTEP YQR+IVRIVFMVPVYALMSFL+LV
Sbjct: 4 LLPIYLIILAFLCTVGAIALALFHIYKHLLNYTEPIYQRYIVRIVFMVPVYALMSFLALV 63
Query: 429 LPQGSIYFNSIREIYEAWVIYNFLSLCLEWVGGPGSXILSLTGRVLKPSWFLXNCCLPPL 608
LP+ SIYFNSIRE+YEAWVIYNFLSLCL WVGGPGS ++SLTGR LKPSW L CC+PPL
Sbjct: 64 LPKSSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGSVVISLTGRSLKPSWHLMTCCIPPL 123
Query: 609 ALDGGFIR*CKQGCLQFVNFETHLVVVTLYFYAKGKYKDGNFFQXIIIVS*QSLYFFLTQ 788
LDG FIR CKQGCLQFV + LV VTL YAKGKYKDGNF + +Y
Sbjct: 124 PLDGRFIRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFSPDQSYLYLTIIYTISYT 183
Query: 789 WXXKALLXFXLACKXICFNNSSXPKFXXXKIVVFPTYGXGVL 914
AL+ F +ACK + + PKF K VVF TY GVL
Sbjct: 184 VALYALVLFYVACKDLLQPFNPVPKFVIIKSVVFLTYWQGVL 225
>gi|6714407|gb|AAF26096.1|AC012393_22 (AC012393) unknown protein [Arabidopsis
thaliana]
Length = 372
Frame 3 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | 372
0 150 300
Plus Strand HSPs:
Score = 316 (111.2 bits), Expect = 3.4e-46, Sum P(2) = 3.4e-46
Identities = 59/74 (79%), Positives = 69/74 (93%), Frame = +3
Query: 249 MVPIFLYIVAFICTCGAIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLV 428
++PI+L I+AF+CT GAIAL+L HIYKHLLNYTEP YQR+IVRIVFMVPVYALMSFL+LV
Sbjct: 4 LLPIYLIILAFLCTVGAIALALFHIYKHLLNYTEPIYQRYIVRIVFMVPVYALMSFLALV 63
Query: 429 LPQGSIYFNSIREI 470
LP+ SIYFNSIRE+
Sbjct: 64 LPKSSIYFNSIREV 77
Score = 194 (68.3 bits), Expect = 3.4e-46, Sum P(2) = 3.4e-46
Identities = 47/97 (48%), Positives = 54/97 (55%), Frame = +3
Query: 624 FIR*CKQGCLQFVNFETHLVVVTLYFYAKGKYKDGNFFQXIIIVS*QSLYFFLTQWXXKA 803
FIR CKQGCLQFV + LV VTL YAKGKYKDGNF + +Y A
Sbjct: 79 FIRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFSPDQSYLYLTIIYTISYTVALYA 138
Query: 804 LLXFXLACKXICFNNSSXPKFXXXKIVVFPTYGXGVL 914
L+ F +ACK + + PKF K VVF TY GVL
Sbjct: 139 LVLFYVACKDLLQPFNPVPKFVIIKSVVFLTYWQGVL 175
>gi|7485938|pir||T01201 hypothetical protein F21E10.13 - Arabidopsis thaliana
>gi|3047085|gb|AAC13598.1| (AF058914) F21E10.13 gene product
[Arabidopsis thaliana]
Length = 396
Frame 3 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | 396
0 150 300
Plus Strand HSPs:
Score = 404 (142.2 bits), Expect = 9.3e-37, P = 9.3e-37
Identities = 83/145 (57%), Positives = 93/145 (64%), Frame = +3
Query: 480 WVIYNFLSLCLEWVGGPGSXILSLTGRVLKPSWFLXNCCLPPLALDGGFIR*CKQGCLQF 659
WVIYNFLSLCL WVGGPGS +LSL+GR LKPSW L CC PPL LDG FIR CKQGCLQF
Sbjct: 55 WVIYNFLSLCLAWVGGPGSVVLSLSGRSLKPSWSLMTCCFPPLTLDGRFIRRCKQGCLQF 114
Query: 660 VNFETHLVVVTLYFYAKGKYKDGNFFQXIIIVS*QSLYFFLTQWXXKALLXFXLACKXIC 839
V + LV VTL YAKGKYKDGNF + +Y AL+ F +AC+ +
Sbjct: 115 VILKPILVAVTLVLYAKGKYKDGNFNPDQAYLYLTIIYTISYTVALYALVLFYMACRDLL 174
Query: 840 FNNSSXPKFXXXKIVVFPTYGXGVL 914
+ PKF K VVF TY GVL
Sbjct: 175 QPFNPVPKFVIIKSVVFLTYWQGVL 199
Score = 232 (81.7 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 47/84 (55%), Positives = 63/84 (75%), Frame = +3
Query: 249 MVPIFLYIVAFICTCGAIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPV-YALMSFLSL 425
++P +L IVAF+CT GAIAL++ HIY+HLLNYTEPTYQR+IVRI+FMVPV + + +FLSL
Sbjct: 4 LIPFYLNIVAFLCTVGAIALAIFHIYRHLLNYTEPTYQRYIVRIIFMVPVTWVIYNFLSL 63
Query: 426 VLP----QGSIYFN-SIREIYEAW 482
L GS+ + S R + +W
Sbjct: 64 CLAWVGGPGSVVLSLSGRSLKPSW 87
>gi|7110635 ref|NP_036396.1| chromosome 22 open reading frame 5
>gi|5596705|emb|CAB51403.1| (AL096879) hypothetical protein [Homo
sapiens]
Length = 373
Frame 3 hits (HSPs): ________________________________
__________________________________________________
Database sequence: | | | | 373
0 150 300
Plus Strand HSPs:
Score = 335 (117.9 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 83/231 (35%), Positives = 120/231 (51%), Frame = +3
Query: 255 PIFLYIVAFICTCG-----AIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFL 419
P+FL A G A+ ++ IY HL Y+ P QR+IVRI+F+VP+YA S+L
Sbjct: 4 PVFLMTTAAQAISGFFVWTALLITCHQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWL 63
Query: 420 SLVL---PQGSIYFNSIREIYEAWVIYNFLSLCLEWVGGPGSXILSLTGRVLKPSWFLXN 590
SL+ Q +YF ++R+ YEA VIYNFLSLC E++GG S + + G+ ++ S
Sbjct: 64 SLLFFTNDQYYVYFGTVRDCYEALVIYNFLSLCYEYLGGESSIMSEIRGKPIESSCMYGT 123
Query: 591 CCLPPLALDGGFIR*CKQGCLQFVNFETHLVVVTLYFYAKGKYKDGNFFQXIIIVS*QSL 770
CCL GF+R CKQ LQF + + V T+ A GKY+DG+F + +
Sbjct: 124 CCLWGKTYSIGFLRFCKQATLQFCVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLYVTII 183
Query: 771 YFFLTQWXXKALLXFXLACKXICFNNSSXPKFXXXKIVVFPTYGXGVLFPL 923
Y AL F A + + S KF K V+F ++ G+L +
Sbjct: 184 YNISVSLALYALFLFYFATRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAI 234
>gi|6572254|emb|CAB63066.1| (AL020993) dJ5O6.2 (novel protein similar to C.
elegans F40E10.6 (isoform 1)) [Homo sapiens]
Length = 293
Frame 3 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | | | 293
0 50 100 150 200 250
Plus Strand HSPs:
Score = 335 (117.9 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 83/231 (35%), Positives = 120/231 (51%), Frame = +3
Query: 255 PIFLYIVAFICTCG-----AIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFL 419
P+FL A G A+ ++ IY HL Y+ P QR+IVRI+F+VP+YA S+L
Sbjct: 4 PVFLMTTAAQAISGFFVWTALLITCHQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWL 63
Query: 420 SLVL---PQGSIYFNSIREIYEAWVIYNFLSLCLEWVGGPGSXILSLTGRVLKPSWFLXN 590
SL+ Q +YF ++R+ YEA VIYNFLSLC E++GG S + + G+ ++ S
Sbjct: 64 SLLFFTNDQYYVYFGTVRDCYEALVIYNFLSLCYEYLGGESSIMSEIRGKPIESSCMYGT 123
Query: 591 CCLPPLALDGGFIR*CKQGCLQFVNFETHLVVVTLYFYAKGKYKDGNFFQXIIIVS*QSL 770
CCL GF+R CKQ LQF + + V T+ A GKY+DG+F + +
Sbjct: 124 CCLWGKTYSIGFLRFCKQATLQFCVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLYVTII 183
Query: 771 YFFLTQWXXKALLXFXLACKXICFNNSSXPKFXXXKIVVFPTYGXGVLFPL 923
Y AL F A + + S KF K V+F ++ G+L +
Sbjct: 184 YNISVSLALYALFLFYFATRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAI 234
>gi|7503052|pir||T21697 hypothetical protein F40E10.6 - Caenorhabditis elegans
>gi|3876602|emb|CAA93657.1| (Z69790) cDNA EST yk376g11.5 comes from
this gene~cDNA EST yk442f1.5 comes from this gene~cDNA EST
yk455h10.5 comes from this gene~cDNA EST yk457h6.5 comes from this
gene~cDNA EST yk464d8.5 comes from this gene [Caenorhabditis
elegans] >gi|3877015|emb|CAA93669.1| (Z69792) cDNA EST yk376g11.5
comes from this gene~cDNA EST yk442f1.5 comes from this gene~cDNA
EST yk455h10.5 comes from this gene~cDNA EST yk457h6.5 comes from
this gene~cDNA EST yk464d8.5 comes from this gene [Caenorhabditis
elegans]
Length = 595
Frame 3 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | 595
0 150 300 450
Plus Strand HSPs:
Score = 340 (119.7 bits), Expect = 2.3e-29, P = 2.3e-29
Identities = 82/211 (38%), Positives = 120/211 (56%), Frame = +3
Query: 300 IALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVLPQGS--IYFNSIREIY 473
I LS L IY+HL Y+ P QR+IVRI+F+VP+YA S+LSL+ + IYFNSIR+ Y
Sbjct: 226 IQLSKLQIYQHLRFYSCPAEQRWIVRILFIVPIYAFDSWLSLIFFSDNVYIYFNSIRDCY 285
Query: 474 EAWVIYNFLSLCLEWVGGPGSXILSLTGRVLKPSWFLX-NCCLPPLALDGGFIR*CKQGC 650
EA+VIY+FLSLC E++GG + + + G+ ++P+ +L CCL F+R CKQ
Sbjct: 286 EAFVIYSFLSLCYEYLGGESNIMAEIRGKPIRPTNYLTCTCCLAGKQYTIEFLRFCKQAT 345
Query: 651 LQFVNFETHLVVVTLYFYAKGKYKDGNFF--QXIIIVS*QSLYFFLTQWXXKALLXFXLA 824
LQF + + V+TL A GKY+DGN+ Q I ++ +Y + F A
Sbjct: 346 LQFCFIKPIMAVITLMLTAIGKYEDGNWSLDQGYIYIT--LVYNVSISLALYGMFLFYAA 403
Query: 825 CKXICFNNSSXPKFXXXKIVVFPTYGXGVLFPL 923
+ + KF K V+F ++ G L +
Sbjct: 404 TRDLLSPYRPVLKFLTVKSVIFLSFWQGFLIAI 436
>gi|7292104|gb|AAF47516.1| (AE003472) CG12004 gene product [Drosophila
melanogaster]
Length = 348
Frame 3 hits (HSPs): ________________________________
__________________________________________________
Database sequence: | | | | 348
0 150 300
Plus Strand HSPs:
Score = 331 (116.5 bits), Expect = 5.1e-29, P = 5.1e-29
Identities = 75/217 (34%), Positives = 115/217 (52%), Frame = +3
Query: 270 IVAFICTCGAIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVLPQGS-- 443
++A +C A+ ++ IY+HL YT P QR+IVRI+F+VP+YA S++SL+
Sbjct: 24 VLAGVCVWAALFITCQQIYQHLRWYTNPQEQRWIVRILFIVPIYATYSWISLLFFNSDNV 83
Query: 444 -IYFNSIREIYEAWVIYNFLSLCLEWVGGPGSXILSLTGRVLKPSWFLXNCCLPPLALDG 620
IYF ++R+ YEA+VIYNFLSLC E++GG G+ + + G+ +K S CCL
Sbjct: 84 YIYFFTVRDCYEAFVIYNFLSLCYEYLGGEGNIMSEIRGKPIKTSCLYGTCCLKGKTYTI 143
Query: 621 GFIR*CKQGCLQFVNFETHLVVVTLYFYAKGKYKDGNFFQXIIIVS*QSLYFFLTQWXXK 800
GF+R CKQ LQF + + + ++ A G Y DG++ + +Y
Sbjct: 144 GFLRFCKQATLQFCLVKPLVAFIIIFLQAFGHYHDGDWSADGGYIYITIIYNISVSLALY 203
Query: 801 ALLXFXLACKXICFNNSSXPKFXXXKIVVFPTYGXGV 911
L F A + + KF K V+F ++ GV
Sbjct: 204 GLYLFYFATRDLLTPFEPVLKFCTIKSVIFLSFWQGV 240
>gi|6572253|emb|CAB63065.1| (AL020993) dJ5O6.2 (novel protein similar to C.
elegans F40E10.6 (isoform 2)) [Homo sapiens]
Length = 261
Frame 3 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | | | | 261
0 50 100 150 200 250
Plus Strand HSPs:
Score = 317 (111.6 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 75/201 (37%), Positives = 108/201 (53%), Frame = +3
Query: 330 HLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVL---PQGSIYFNSIREIYEAWVIYNFL 500
HL Y+ P QR+IVRI+F+VP+YA S+LSL+ Q +YF ++R+ YEA VIYNFL
Sbjct: 2 HLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEALVIYNFL 61
Query: 501 SLCLEWVGGPGSXILSLTGRVLKPSWFLXNCCLPPLALDGGFIR*CKQGCLQFVNFETHL 680
SLC E++GG S + + G+ ++ S CCL GF+R CKQ LQF + +
Sbjct: 62 SLCYEYLGGESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGFLRFCKQATLQFCVVKPLM 121
Query: 681 VVVTLYFYAKGKYKDGNFFQXIIIVS*QSLYFFLTQWXXKALLXFXLACKXICFNNSSXP 860
V T+ A GKY+DG+F + +Y AL F A + + S
Sbjct: 122 AVSTVVLQAFGKYRDGDFDVTSGYLYVTIIYNISVSLALYALFLFYFATRELLSPYSPVL 181
Query: 861 KFXXXKIVVFPTYGXGVLFPL 923
KF K V+F ++ G+L +
Sbjct: 182 KFFMVKSVIFLSFWQGMLLAI 202
>gi|7297586|gb|AAF52840.1| (AE003626) CG5850 gene product [Drosophila
melanogaster]
Length = 569
Frame 3 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | 569
0 150 300 450
Plus Strand HSPs:
Score = 275 (96.8 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 69/217 (31%), Positives = 117/217 (53%), Frame = +3
Query: 264 LYIVAFICTCGAIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVLPQGS 443
L ++ + A+ +S+ HI +H++++T+P Q+ I+RI++MVP+YAL +++ L P+ S
Sbjct: 51 LILIGGLFVLSAVPVSIWHIIQHVIHFTKPILQKHIIRILWMVPIYALNAWIGLFFPKHS 110
Query: 444 IYFNSIREIYEAWVIYNFLSLCLEWVGGPGSXILSLTGRVLKPSWFLXNCCLPPLALDGG 623
IY +S+RE YEA+VIYNF+ L ++ ++ + P +F CC+ P +
Sbjct: 111 IYVDSLRECYEAYVIYNFMVYLLNYLNLGMDLEATMEYKPQVPHFFPL-CCMRPWVMGRE 169
Query: 624 FIR*CKQGCLQFVNFETHLVVVTLYFYAKGKYKDGNF-----FQXIIIVS*QSLYFFLTQ 788
FI CK G LQ+ +++ G Y +G F F I++V+ ++ F+
Sbjct: 170 FIHNCKHGILQYTVVRPITTFISVICELCGVYGEGEFAGNVAFPYIVVVN--NISQFVAM 227
Query: 789 WXXKALLXFXLACKXICFNNSSXPKFXXXKIVVFPTYGXGVL 914
+ L+ F A K PKF K VVF ++ GVL
Sbjct: 228 Y---CLVLFYRANKEDLKPMKPIPKFLCIKAVVFFSFFQGVL 266
>gi|7023136|dbj|BAA91851.1| (AK001708) unnamed protein product [Homo sapiens]
Length = 438
Frame 3 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | 438
0 150 300
Plus Strand HSPs:
Score = 242 (85.2 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 67/219 (30%), Positives = 110/219 (50%), Frame = +3
Query: 267 YIVAFICTCGAIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVLPQGSI 446
+ +A I I +SL I +HL++YT+P Q+ I+RI++MVP+Y+L S+++L P +I
Sbjct: 49 WFIAGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPGIAI 108
Query: 447 YFNSIREIYEAWVIYNFLSLCLEWVGGPGSXILSLTGRVLKPSWFLXNCCLPPLALDGGF 626
Y ++ RE YEA+VIYNF+ ++ ++ + + F CC PP A+
Sbjct: 109 YVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLILEAKDQQKHFPPLCCCPPWAMGEVL 168
Query: 627 IR*CKQGCLQFVNFETHLVVVTLYFYAKGKYKDGNF-----FQXIIIVS*QSLYFFLTQW 791
+ CK G LQ+ +V L G Y +GNF + ++I++ S F +
Sbjct: 169 LFRCKLGVLQYTVVRPFTTIVALICELLGIYDEGNFSFSNAWTYLVIINNMSQLFAMY-- 226
Query: 792 XXKALLXFXLACKXICFNNSSXPKFXXXKIVVFPTYGXGVLFPL 923
LL F K KF ++VVF ++ V+ L
Sbjct: 227 ---CLLLFYKVLKEELSPIQPVGKFLCVRLVVFVSFWQAVVIAL 267
>gi|1351659|sp|Q09906|YAJ6_SCHPO HYPOTHETICAL 49.3 KD PROTEIN C30D11.06C IN
CHROMOSOME I >gi|2130405|pir||S62564 hypothetical protein
SPAC30D11.06c - fission yeast (Schizosaccharomyces pombe)
>gi|7491068|pir||T38593 hypothetical protein SPAC30D11.06c -
fission yeast (Schizosaccharomyces pombe)
>gi|1065893|emb|CAA91892.1| (Z67961) hypothetical protein
[Schizosaccharomyces pombe]
Length = 426
Frame 3 hits (HSPs): _________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 426
0 150 300
__________________
Annotated Domains:
DOMO DM06417: 1..340
DOMO DM08523: 341..381
Entrez Transmembrane region: POTENTIAL. 39..59
Entrez Transmembrane region: POTENTIAL. 73..93
Entrez Transmembrane region: POTENTIAL. 133..153
Entrez Transmembrane region: POTENTIAL. 172..192
Entrez Transmembrane region: POTENTIAL. 223..243
PRODOM PD014035: 4..272
PRODOM PD128189: YAJ6_SCHPO 274..425
__________________
Plus Strand HSPs:
Score = 217 (76.4 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 62/203 (30%), Positives = 101/203 (49%), Frame = +3
Query: 297 AIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVLPQ-GSIYFNSIREIY 473
A+ LS + I HL NY +P QR +VRI+ M+ +Y+ +SFLS+ + GSI F REIY
Sbjct: 16 ALVLSCISIITHLKNYKKPVLQRSVVRILMMIVIYSSVSFLSVYNEKIGSI-FEPFREIY 74
Query: 474 EAWVIYNFLSLCLEWVGGPGSXILSLTGRVLKPSWFLXNCCLPPLALDGGF-IR*CKQGC 650
EA+ +Y F L ++++GG + ++SL G + +P + N + L + K+G
Sbjct: 75 EAFALYCFFCLLIDYLGGERAAVISLHGHLPRPRLWPLNYLQDDIDLSDPYTFLSIKRGI 134
Query: 651 LQFVNFETHLVVVTLYFYAKGKYKDGNFFQXIIIVS*QSLYFFLTQWXXKALLXFXLACK 830
LQ+ + LV+ L G Y + Q + + L+ L L + L
Sbjct: 135 LQYTWLKPFLVIAVLLTKVTGVYDRED--QPVYASA--DLWIGLVYNISITLSLYSLTTF 190
Query: 831 XICFNNSSXP-----KFXXXKIVVFPTY 899
+C + P KF K ++F +Y
Sbjct: 191 WVCLHEELAPFRPFPKFLSVKAIIFASY 218
>gi|6322904 ref|NP_012977.1| Ykr051wp >gi|549619|sp|P36142|YK31_YEAST
HYPOTHETICAL 48.8 KD PROTEIN IN TRK2-MRS4 INTERGENIC REGION
>gi|539262|pir||S38125 hypothetical protein YKR051w - yeast
(Saccharomyces cerevisiae) >gi|486505|emb|CAA82129.1| (Z28276) ORF
YKR051w [Saccharomyces cerevisiae]
Length = 418
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | 418
0 150 300
Plus Strand HSPs:
Score = 168 (59.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 62/223 (27%), Positives = 100/223 (44%), Frame = +3
Query: 246 KMVPIFLYIVAFICTCGAIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSL 425
K++ +LY + A +S I +HLLNY +P QR +RI+ +VP++++ +
Sbjct: 4 KLLCWWLYWPCVYSSIIATIISFYTITRHLLNYRKPYEQRLSIRILLLVPIFSVSCASGI 63
Query: 426 VLPQGS-IYFNSIREIYEAWVIYNFLSLCLEWVGGPGSXI--LSLTGRVLK-PSWFLXNC 593
+ P+ + Y + IRE YEA+VIY F + +GG + I LSL + P +
Sbjct: 64 IKPEAAQFYVDPIREFYEAFVIYTFFTFLTLLLGGERNIITVLSLNHAPTRHPIPLIGKI 123
Query: 594 CLPPLALDGGF-IR*CKQGCLQFVNFETHLVVVTLYFYAKGKYKDGNFFQXIIIVS*QSL 770
C P+ L F K+G LQ+V F+ TL A K F+ + V
Sbjct: 124 C-KPIDLSDPFDFLFVKKGILQYVWFKPFYCFGTLICSAWKLPK----FEIFLNV----F 174
Query: 771 YFFLTQWXXKALLXFXLACKXICFNNSSXPKFXXXKIVVFPTYGXGVL 914
Y W +L F KF K+++F +Y ++
Sbjct: 175 YNISVTWSLYSLALFWKCLYPELTPYKPWLKFLCVKLIIFASYWQSII 222
>gi|7487004|pir||T00451 hypothetical protein T14N5.8 - Arabidopsis thaliana
>gi|3540198|gb|AAC34348.1| (AC004260) Unknown protein [Arabidopsis
thaliana]
Length = 500
Frame 3 hits (HSPs): ________ _____
__________________________________________________
Database sequence: | | | | | 500
0 150 300 450
Plus Strand HSPs:
Score = 153 (53.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 32/76 (42%), Positives = 49/76 (64%), Frame = +3
Query: 297 AIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVLPQGSIYFNSIREIYE 476
AI L + I++HL +Y +P Q+F++ ++ MVPVYA+ SFLSLV + + IR+ YE
Sbjct: 53 AILLPMYLIFEHLASYNQPEEQKFLIGLILMVPVYAVESFLSLVNSEAAFNCEVIRDCYE 112
Query: 477 AWVIYNF---LSLCLE 515
A+ +Y F L CL+
Sbjct: 113 AFALYCFERYLIACLD 128
Score = 40 (14.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 11/42 (26%), Positives = 16/42 (38%), Frame = +3
Query: 789 WXXKALLXFXLACKXICFNNSSXPKFXXXKIVVFPTYGXGVL 914
W L+ F K KF K +VF T+ G++
Sbjct: 249 WALYCLVQFYNVIKDKLAPIKPLAKFLTFKSIVFLTWWQGII 290
>gi|7485716|pir||T05165 hypothetical protein F18E5.190 - Arabidopsis thaliana
>gi|3080401|emb|CAA18721.1| (AL022603) putative protein
[Arabidopsis thaliana] >gi|4455265|emb|CAB36801.1| (AL035527)
putative protein [Arabidopsis thaliana] >gi|7268954|emb|CAB81264.1|
(AL161555) putative protein [Arabidopsis thaliana]
Length = 294
Frame 3 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | | | | 294
0 50 100 150 200 250
Plus Strand HSPs:
Score = 140 (49.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 59/218 (27%), Positives = 102/218 (46%), Frame = +3
Query: 273 VAFICTCGAIALSLLH-----IYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVLPQ 437
+ F C+ ++ L+L H + +HL ++ P Q+ I+ IV M P+YA++SF+ L+ +
Sbjct: 12 ITFYCSAFSVLLTL-HFTIQLVSQHLFHWKNPKEQKAILIIVLMAPIYAVVSFIGLLEVK 70
Query: 438 GS----IYFNSIREIYEAWVIYNFLSLCLEWVG-GPGSXIL--SLTGRVLKPSWFLXNCC 596
GS ++ SI+E YEA VI FL+L ++ IL + GR + S F
Sbjct: 71 GSETFFLFLESIKECYEALVIAKFLALMYSYLNISMSKNILPDGIKGREIHHS-FPMTLF 129
Query: 597 LPPLA-LDGGFIR*CKQGCLQFVNFETHLVVVTLYFYAKGKYKDGNFFQXIIIVS*QSLY 773
P + LD ++ K QFV + + G Y + IIV+
Sbjct: 130 QPHVVRLDRHTLKLLKYWTWQFVVIRPVCSTLMIALQLIGFYPSWLSWTFTIIVN----- 184
Query: 774 FFLTQWXXKALLXFXLACKXICFNNSSXPKFXXXKIVVFPTYGXGV 911
F ++ ++ + + K + +N KF K +VF + G+
Sbjct: 185 FSVSLALYSLVIFYHVFAKELAPHNPLA-KFLCIKGIVFFVFWQGI 229
>gi|7496248|pir||T15541 hypothetical protein C18A3.4 - Caenorhabditis elegans
>gi|861347|gb|AAA68368.1| (U28944) C18A3.4 gene product
[Caenorhabditis elegans]
Length = 342
Frame 3 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | 342
0 150 300
Plus Strand HSPs:
Score = 106 (37.3 bits), Expect = 0.032, P = 0.031
Identities = 36/150 (24%), Positives = 70/150 (46%), Frame = +3
Query: 273 VAFICTCGAIALSLLH-IYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVLPQGSIY 449
VA T G + L++LH IY H T + + IV + P+ +L++ +++ +P+
Sbjct: 48 VATAVTVGTVCLAVLHLIYIHFY-ITHSSRRLHIVLLACTAPLVSLLALVAMYMPRVWFL 106
Query: 450 FNSIREIYEAWVIYNFLSLCLEWVGGPGSXILSLTGR-----VLKPSWFLXNCCLPPLAL 614
+ + +Y ++ ++ + L L G + + + R + P + CLP + L
Sbjct: 107 SHLLSFLYFSFALWVIICLLLHIFDGHHALVTKMMQRLQYVEIATPPFCCLFPCLPKVRL 166
Query: 615 DGGFIR*CKQGCLQ--FVNFETHLVVVTLYF 701
+G IR C+ +Q V LV + +YF
Sbjct: 167 EGKKIRWCELMVMQAPIVRLFATLVSLVIYF 197
>gi|7485951|pir||T05664 hypothetical protein F22I13.130 - Arabidopsis thaliana
>gi|4539344|emb|CAB37492.1| (AL035539) putative protein
[Arabidopsis thaliana] >gi|7270820|emb|CAB80501.1| (AL161593)
putative protein [Arabidopsis thaliana]
Length = 466
Frame 3 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | 466
0 150 300 450
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 1.8, Sum P(2) = 0.83
Identities = 50/199 (25%), Positives = 74/199 (37%), Frame = +3
Query: 378 IVF-MVPVYALMSFLSLVLPQGSIYFNSIREIYEAWVIYNFLSLCLEWVGGPGSXI--LS 548
+VF + Y F SLV P S+ +R+ YE++ +Y F + +GG I +
Sbjct: 38 LVFDHLSTYKNPEFASLVKPSISVDCGILRDCYESFAMYCFGRYLVACIGGEERTIEFME 97
Query: 549 LTGRV-LKPSW-------------FLXNCCLPPLALDGGFIR*CKQGCLQFVNFETHLVV 686
GR K F N L P L F + K G +Q++ ++ +
Sbjct: 98 RQGRKSFKTPLLDHKDEKGIIKHPFPMNLFLKPWRLSPWFYQVVKFGIVQYMIIKSLTAL 157
Query: 687 VTLYFYAKGKYKDGNFFQXIIIVS*QSLYFFLTQWXXKALLXFXLACKXICFNNSSXPKF 866
L A G Y +G F + F W L+ F A K + KF
Sbjct: 158 TALILEAFGVYCEGEFKWGCGYPYLAVVLNFSQSWALYCLVQFYGATKDELAHIQPLAKF 217
Query: 867 XXXKIVVFPTYGXGVLFPL 923
K +VF T+ GV L
Sbjct: 218 LTFKSIVFLTWWQGVAIAL 236
Score = 43 (15.1 bits), Expect = 1.8, Sum P(2) = 0.83
Identities = 7/24 (29%), Positives = 13/24 (54%), Frame = +3
Query: 300 IALSLLHIYKHLLNYTEPTYQRFI 371
++LSL ++ HL Y P + +
Sbjct: 32 LSLSLFLVFDHLSTYKNPEFASLV 55
>gi|7020081|dbj|BAA90988.1| (AK000169) unnamed protein product [Homo sapiens]
Length = 313
Frame 3 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | | | | 313
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 2.2, P = 0.89
Identities = 32/111 (28%), Positives = 47/111 (42%), Frame = +3
Query: 591 CCLPPLALDGGFIR*CKQGCLQFVNFETHLVVVTLYFYAKGKYKDGNF-----FQXIIIV 755
CC PP A+ + CK G LQ+ +V L G Y +GNF + ++I+
Sbjct: 32 CCCPPWAMGEVLLFRCKLGVLQYTVVRPFTTIVALICELLGIYDEGNFSFSNAWTYLVII 91
Query: 756 S*QSLYFFLTQWXXKALLXFXLACKXICFNNSSXPKFXXXKIVVFPTYGXGVLFPL 923
+ S F + LL F K KF K+VVF ++ V+ L
Sbjct: 92 NNMSQLFAMY-----CLLPFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVVIAL 142
>gi|7707666|dbj|BAA95343.1| (AB027560) ATPase subunit 6 [Echinococcus vogeli]
Length = 170
Frame 3 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | 170
0 50 100 150
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 3.0, P = 0.95
Identities = 42/147 (28%), Positives = 69/147 (46%), Frame = +3
Query: 264 LYIVAFICTCGAIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVLPQGS 443
+Y++ F C + L+ + L Y P F + VF+V V +M F+SL L +
Sbjct: 14 IYVLVFNCVSYYYFVLLVFVLMWFLIYRLPYCYSFYLFSVFLVGVVFVM-FVSLFLCR-- 70
Query: 444 IYFNSIREIYEAWV-IYNFLSLC-LEWVGGPGSXILSLTGRVLKPSWFLXNCCLPPLALD 617
F+S+ + ++V + L +C L V S I+ +L+P + CL +AL
Sbjct: 71 -VFSSVSSFFASFVPLGTPLYICFLVCVAETISYIIRPVVLILRPFINISLGCLGAVAL- 128
Query: 618 GGFIR*CKQGCLQFVNFETHLVVVTLYFY 704
G L FV++ LV+V L+FY
Sbjct: 129 ---------GNLCFVSWWWSLVLVGLFFY 148
>gi|625591|pir||D61399 hypothetical early protein E8 - bovine papillomavirus
type 3
Length = 75
Frame 3 hits (HSPs): _________________________
Annotated Domains: ____________________________
__________________________________________________
Database sequence: | | | | | 75
0 20 40 60
__________________
Annotated Domains:
DOMO DM04650: 34..75
__________________
Plus Strand HSPs:
Score = 66 (23.2 bits), Expect = 3.8, P = 0.98
Identities = 19/37 (51%), Positives = 22/37 (59%), Frame = +3
Query: 411 SFLSLVLPQGSIYFNSIREIYEA---WVIYNFLSLCL 512
S LSL P GSI S+ IY WV ++FLSLCL
Sbjct: 20 SSLSLHGPLGSICIMSLTLIYWLLLLWVSFHFLSLCL 56
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.97
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.340 0.153 0.510
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.347 0.152 0.573
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.346 0.152 0.527
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.352 0.154 0.565
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.361 0.165 0.583
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.353 0.157 0.550
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 309 295 10. 78 3 12 22 0.11 36
33 0.10 40
+2 0 309 294 10. 78 3 12 22 0.10 36
33 0.10 40
+1 0 310 296 10. 78 3 12 22 0.11 36
33 0.10 40
-1 0 310 297 10. 78 3 12 22 0.11 36
33 0.10 40
-2 0 309 296 10. 78 3 12 22 0.11 36
33 0.10 40
-3 0 309 294 10. 78 3 12 22 0.10 36
33 0.10 40
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 8:50 PM CDT May 27, 2000
Format: BLAST
# of letters in database: 158,518,215
# of sequences in database: 505,245
# of database sequences satisfying E: 19
No. of states in DFA: 600 (59 KB)
Total size of DFA: 295 KB (320 KB)
Time to generate neighborhood: 0.02u 0.01s 0.03t Elapsed: 00:00:00
No. of threads or processors used: 4
Search cpu time: 384.93u 1.46s 386.39t Elapsed: 00:02:48
Total cpu time: 385.02u 1.49s 386.51t Elapsed: 00:02:48
Start: Mon Oct 16 19:22:23 2000 End: Mon Oct 16 19:25:11 2000
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000