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UniSTS:23040 Links
D4S2542E
Canis familiaris chromosome 32, locus LOC487908
Homo sapiens chromosome 4, locus ANK2
Macaca mulatta chromosome 5, locus ANK2
Pan troglodytes chromosome 4, locus ANK2

Found by e-PCR in sequences from Canis familiaris, Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:CAAGATGCTGATTCGTCAACTG
Reverse primer:CTTGTCAAAACCTTCACTGGAG
PCR product size:221 (bp), Homo sapiens

   Canis familiaris
Name: D4S2542E
Polymorphism info:  

Cross References Help
Gene GeneID:487908
 Symbol:LOC487908
 Description:similar to ankyrin 2 isoform 2
 Position: 

Mapping InformationHelp
D4S2542E Sequence Map: Chr 32 Map Viewer
  Position: 36066919-36067103 (bp)

Electronic PCR results Help
RefSeq mRNA (5 of 11)[Show All Hits]
XM_858608.1 8103 .. 8287 (185 bp)  
XM_846341.1 8061 .. 8245 (185 bp)  
XM_545031.2 8181 .. 8365 (185 bp)  
XM_858677.1 8259 .. 8443 (185 bp)  
XM_858699.1 8127 .. 8311 (185 bp)  
 
Genomic (1)
CM000032.2 36066919 .. 36067103 (185 bp)  
 
ESTs (4)
DT536933.1 359 .. 543 (185 bp)  
DT538711.1 31 .. 215 (185 bp)  
DT540260.1 15 .. 199 (185 bp)  
DT540670.1 248 .. 432 (185 bp)  
 
Whole Genome Shotgun sequences (1)
AAEX02027306.1 104546 .. 104730 (185 bp)  
 

   Homo sapiens
Name: D4S2542E
Also known as: Cda18g11 GDB:442530 GDB:448454
Polymorphism info:  

Cross References Help
Gene GeneID:287
 Symbol:ANK2
 Description:ankyrin 2, neuronal
 Position:4q25-q27
UniGeneHs.620557 Ankyrin 2, neuronal

Mapping InformationHelp
D4S2542E Sequence Map: Chr 4|HuRef Map Viewer
  Position: 110032883-110033065 (bp)
 
D4S2542E Sequence Map: Chr 4|Celera Map Viewer
  Position: 111596216-111596398 (bp)
 
D4S2542E Sequence Map: Chr 4 Map Viewer
  Position: 114524016-114524198 (bp)
 
Cda18g11 NCBI RH Map: Chr 4 Map Viewer
  Position: 1186.1 (cR)
  Lod score: 1.35
 
Cda18g11 GeneMap99-GB4 Map: Chr 4 Map Viewer
  Position: 528.12 (cR3000)
  Lod score: 1.30
  Reference Interval: D4S2945-D4S430

Electronic PCR results Help
RefSeq mRNA (2)
NM_001148.3 13829 .. 14011 (183 bp)  
NM_020977.2 7574 .. 7756 (183 bp)  
 
mRNA (5)
BC017986.1 835 .. 1017 (183 bp)  
BC047498.1 901 .. 1083 (183 bp)  
BX537758.1 7727 .. 7909 (183 bp)  
BX538132.1 4839 .. 5021 (183 bp)  
BX538239.1 5818 .. 6000 (183 bp)  
 
Genomic (5 of 7)[Show All Hits]
AC093900.3 75205 .. 75387 (183 bp)  
CH003451.1 110151049 .. 110151231 (183 bp)  
CH003499.1 114140078 .. 114140260 (183 bp)  
CH471057.1 61421190 .. 61421372 (183 bp)  
CM000255.1 111596216 .. 111596398 (183 bp)  
 
ESTs (5 of 70)[Show All Hits]
Z39382.1 137 .. 319 (183 bp)  
R41849.1 148 .. 332 (185 bp)  
R60790.1 151 .. 335 (185 bp)  
H15099.1 153 .. 335 (183 bp)  
N53354.1 138 .. 320 (183 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01049866.1 273 .. 455 (183 bp)  
AADC01043886.1 200 .. 382 (183 bp)  
AADB02007272.1 461191 .. 461373 (183 bp)  
ABBA01063832.1 662 .. 844 (183 bp)  
 

   Macaca mulatta
Name: D4S2542E
Polymorphism info:  

Cross References Help
Gene GeneID:702180
 Symbol:ANK2
 Description:ankyrin 2
 Position: 
UniGeneMmu.4610 Ankyrin 2

Mapping InformationHelp
D4S2542E Sequence Map: Chr 5 Map Viewer
  Position: 106236588-106236770 (bp)

   Oryctolagus cuniculus
 
Polymorphism info:  

Cross References Help
UniGeneOcu.5956 Transcribed locus


   Pan troglodytes
Name: D4S2542E
Polymorphism info:  

Cross References Help
Gene GeneID:461444
 Symbol:ANK2
 Description:ankyrin 2, neuronal
 Position: 

Mapping InformationHelp
D4S2542E Sequence Map: Chr 4 Map Viewer
  Position: 116909404-116909586 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XM_517403.2 12431 .. 12613 (183 bp)  
 
Genomic (1)
CM000318.1 116909404 .. 116909586 (183 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01227335.1 69224 .. 69406 (183 bp)  
AACZ02051702.1 41994 .. 42176 (183 bp)  
 

 

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