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Library:17681 (dbEST ID)
Brain 3' EST
Library Description
| Organism: | Homo sapiens |
| Sex: | Female |
| Tissue: | Brain |
| Vector: | pGEM-T |
| Vector type: | Plasmid |
The 3' EST was isolated by a SAGE tag CATG- through mis-priming using the GLGI technique.
Source: San Ming Wang, ENH Research Institute, Feinberg School of Medicine, Northwestern University
Gene Content Analysis
480 ESTs from this library were grouped into 447 UniGene entries (putative genes) [UniGene build #218, 05-Jan-2009]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).
| ESTs | TPM | UniGene Entry | ||
|---|---|---|---|---|
| 1 | 2083 |  |
Hs.691174 | Transcribed locus. |
| 1 | 2083 | |
Hs.691173 | Transcribed locus. |
| 1 | 2083 | |
Hs.691172 | Transcribed locus. |
| 1 | 2083 | |
Hs.691171 | Transcribed locus. |
| 1 | 2083 | |
Hs.691170 | Transcribed locus. |
| 1 | 2083 | |
Hs.691169 | Transcribed locus. |
| 1 | 2083 | |
Hs.691168 | Transcribed locus. |
| 1 | 2083 | |
Hs.690332 | Transcribed locus. |
| 1 | 2083 | |
Hs.686685 | (Xs15) mRNA, 320bp. |
| 1 | 2083 | |
Hs.684013 | Transcribed locus. |
| 1 | 2083 | |
Hs.679821 | Transcribed locus. |
| 1 | 2083 | |
Hs.679409 | CDNA clone IMAGE:3636371. |
| 1 | 2083 | |
Hs.678316 | Transcribed locus. |
| 1 | 2083 | |
Hs.678064 | Transcribed locus. |
| 1 | 2083 | |
Hs.666095 | Transcribed locus. |
| 1 | 2083 | |
Hs.664632 | Transcribed locus. |
| 1 | 2083 | |
Hs.663085 | Transcribed locus. |
| 1 | 2083 | |
Hs.660882 | Transcribed locus, strongly similar to XP_001716883.1 PREDICTED: hypothetical protein [Homo sapiens]. |
| 1 | 2083 | |
Hs.658425 | Transcribed locus. |
| 1 | 2083 | |
Hs.657762 | Transcribed locus. |
| 1 | 2083 | |
Hs.656770 | Checkpoint with forkhead and ring finger domains. |
| 1 | 2083 | |
Hs.656760 | CDNA clone IMAGE:4801360. |
| 1 | 2083 | |
Hs.656712 | Transcribed locus. |
| 1 | 2083 | |
Hs.655672 | Rho GTPase activating protein 22. |
| 1 | 2083 | |
Hs.655325 | Ras homolog gene family, member T1. |
| 1 | 2083 | |
Hs.655189 | WW domain containing E3 ubiquitin protein ligase 1. |
| 1 | 2083 | |
Hs.654869 | Bromodomain containing 3. |
| 1 | 2083 | |
Hs.654791 | Transcribed locus. |
| 1 | 2083 | |
Hs.654401 | IMP (inosine monophosphate) dehydrogenase 1. |
| 1 | 2083 | |
Hs.654386 | Cadherin 13, H-cadherin (heart). |
| 1 | 2083 | |
Hs.652114 | Ribosomal protein L28. |
| 1 | 2083 | |
Hs.650804 | Transcribed locus. |
| 1 | 2083 | |
Hs.650803 | Transcribed locus. |
| 1 | 2083 | |
Hs.649497 | Dynein, cytoplasmic 1, heavy chain 1. |
| 1 | 2083 | |
Hs.646438 | DiGeorge syndrome critical region gene 5 (non-protein coding). |
| 1 | 2083 | |
Hs.645915 | Transcribed locus. |
| 1 | 2083 | |
Hs.645655 | Transcribed locus. |
| 1 | 2083 | |
Hs.644794 | Ribosomal protein L26. |
| 1 | 2083 | |
Hs.644420 | TAO kinase 3. |
| 1 | 2083 | |
Hs.643544 | Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide. |
| 1 | 2083 | |
Hs.643540 | Transcribed locus. |
| 1 | 2083 | |
Hs.643454 | Dystrobrevin, alpha. |
| 1 | 2083 | |
Hs.642705 | Transcribed locus. |
| 1 | 2083 | |
Hs.641057 | Transcribed locus. |
| 1 | 2083 | |
Hs.641056 | Transcribed locus. |
| 1 | 2083 | |
Hs.641055 | Transcribed locus, strongly similar to NP_963291.1 diacylglycerol kinase zeta isoform 3 [Homo sapiens]. |
| 1 | 2083 | |
Hs.641054 | Transcribed locus. |
| 1 | 2083 | |
Hs.641053 | Transcribed locus. |
| 1 | 2083 | |
Hs.641049 | Transcribed locus. |
| 1 | 2083 | |
Hs.639609 | Stathmin-like 3. |
| 1 | 2083 | |
Hs.635 | Calcium channel, voltage-dependent, beta 1 subunit. |
| 1 | 2083 | |
Hs.633087 | CDNA clone IMAGE:3878236. |
| 1 | 2083 | |
Hs.632573 | Similar to ribosomal protein L23A. |
| 1 | 2083 | |
Hs.632456 | Endosulfine alpha. |
| 1 | 2083 | |
Hs.632435 | Lix1 homolog (mouse)-like. |
| 1 | 2083 | |
Hs.632239 | MAX binding protein. |
| 1 | 2083 | |
Hs.632223 | Polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa. |
| 1 | 2083 | |
Hs.632119 | Cholinergic receptor, muscarinic 1. |
| 1 | 2083 | |
Hs.631992 | Dystonin. |
| 1 | 2083 | |
Hs.629047 | Transcribed locus. |
| 1 | 2083 | |
Hs.629046 | Transcribed locus. |
| 1 | 2083 | |
Hs.629045 | Transcribed locus. |
| 1 | 2083 | |
Hs.629043 | Transcribed locus. |
| 1 | 2083 | |
Hs.629042 | Transcribed locus. |
| 1 | 2083 | |
Hs.629041 | Transcribed locus. |
| 1 | 2083 | |
Hs.629040 | Transcribed locus. |
| 1 | 2083 | |
Hs.629039 | Transcribed locus. |
| 1 | 2083 | |
Hs.629038 | Transcribed locus. |
| 1 | 2083 | |
Hs.629036 | Transcribed locus. |
| 1 | 2083 | |
Hs.629035 | Transcribed locus. |
| 1 | 2083 | |
Hs.629033 | Transcribed locus. |
| 1 | 2083 | |
Hs.629032 | Transcribed locus. |
| 1 | 2083 | |
Hs.629031 | Transcribed locus. |
| 1 | 2083 | |
Hs.629030 | Transcribed locus. |
| 1 | 2083 | |
Hs.629029 | Transcribed locus. |
| 1 | 2083 | |
Hs.629028 | Transcribed locus. |
| 1 | 2083 | |
Hs.629027 | Transcribed locus. |
| 1 | 2083 | |
Hs.629026 | Transcribed locus. |
| 1 | 2083 | |
Hs.629025 | Transcribed locus. |
| 1 | 2083 | |
Hs.629024 | Transcribed locus. |
| 1 | 2083 | |
Hs.629023 | Transcribed locus. |
| 1 | 2083 | |
Hs.629021 | Transcribed locus. |
| 1 | 2083 | |
Hs.629019 | Transcribed locus. |
| 1 | 2083 | |
Hs.629018 | Transcribed locus. |
| 1 | 2083 | |
Hs.629017 | Transcribed locus. |
| 1 | 2083 | |
Hs.629016 | Transcribed locus. |
| 1 | 2083 | |
Hs.629015 | Transcribed locus. |
| 1 | 2083 | |
Hs.629013 | Transcribed locus, moderately similar to NP_877962.1 activating transcription factor 4 [Homo sapiens]. |
| 1 | 2083 | |
Hs.629012 | Transcribed locus. |
| 1 | 2083 | |
Hs.629011 | Transcribed locus. |
| 1 | 2083 | |
Hs.629010 | Transcribed locus. |
| 1 | 2083 | |
Hs.629009 | Transcribed locus. |
| 1 | 2083 | |
Hs.629008 | Transcribed locus. |
| 1 | 2083 | |
Hs.629007 | Transcribed locus. |
| 1 | 2083 | |
Hs.629006 | Transcribed locus. |
| 1 | 2083 | |
Hs.629005 | Transcribed locus. |
| 1 | 2083 | |
Hs.629004 | Transcribed locus. |
| 1 | 2083 | |
Hs.629003 | Transcribed locus. |
| 1 | 2083 | |
Hs.629002 | Transcribed locus. |
| 1 | 2083 | |
Hs.629001 | Transcribed locus. |
Source: NCBI UniGene
EST Sequences
1,091 EST sequences from this library have been submitted to the public sequence database as of 05-Jan-2009.
Source: NCBI GenBank
Click the button to save sequences to a file (FASTA format)
Keywords
- brain
- normal
- unknown developmental stage
- female
Source: NCBI Clone Registry
References
Pan-genome isolation of low abundance transcripts using SAGE tag. Kim YC, et al., FEBS Lett 580, 6721-6729 (2006).