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Library:10769 (dbEST ID)
MT0429
Library Description
| Organism: | Homo sapiens |
| Developmental stage: | Adult |
| Organ: | marrow |
| Vector: | puc18 |
| Vector type: | Plasmid |
| Cloning site 1: | SmaI |
| Cloning site 2: | SmaI |
A mini-library was made by cloning products derived from ORESTES PCR (U.S. Letters Patent application No. 196,716 - Ludwig Institute for Cancer Research) profiles into the pUC 18 vector. Reverse transcription of tissue mRNA and cDNA amplification were performed under low stringency conditions.
Source: Simpson A.J.G., Ludwig Institute for Cancer Research
Gene Content Analysis
69 ESTs from this library were grouped into 63 UniGene entries (putative genes) [UniGene build #218, 05-Jan-2009]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).
| ESTs | TPM | UniGene Entry | ||
|---|---|---|---|---|
| 3 | 43478 |  |
Hs.524579 | Lysozyme (renal amyloidosis). |
| 3 | 43478 | |
Hs.520640 | Actin, beta. |
| 3 | 43478 | |
Hs.204238 | Lipocalin 2. |
| 1 | 14493 | |
Hs.83636 | Adrenergic, beta, receptor kinase 1. |
| 1 | 14493 | |
Hs.7744 | NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa. |
| 1 | 14493 | |
Hs.75516 | Tyrosine kinase 2. |
| 1 | 14493 | |
Hs.753 | Formyl peptide receptor 1. |
| 1 | 14493 | |
Hs.713560 | ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast). |
| 1 | 14493 | |
Hs.708811 | Transcribed locus. |
| 1 | 14493 | |
Hs.696221 | Zinc finger protein 655. |
| 1 | 14493 | |
Hs.673372 | Transcribed locus, strongly similar to NP_001129575.1 transmembrane protein 132C [Homo sapiens]. |
| 1 | 14493 | |
Hs.659260 | Transcribed locus, strongly similar to NP_001851.1 solute carrier family 31 (copper transporters), member 2 [Homo sapiens]. |
| 1 | 14493 | |
Hs.659185 | Transcribed locus. |
| 1 | 14493 | |
Hs.655552 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 1. |
| 1 | 14493 | |
Hs.654404 | Major histocompatibility complex, class I, C. |
| 1 | 14493 | |
Hs.647039 | GTF2I repeat domain containing 2. |
| 1 | 14493 | |
Hs.636561 | Hypothetical protein LOC200030. |
| 1 | 14493 | |
Hs.632373 | Glucocorticoid modulatory element binding protein 1. |
| 1 | 14493 | |
Hs.632242 | Calmodulin binding transcription activator 2. |
| 1 | 14493 | |
Hs.631932 | Similar to hypothetical protein LOC284701. |
| 1 | 14493 | |
Hs.596014 | Importin 9. |
| 1 | 14493 | |
Hs.591366 | Coiled-coil domain containing 109A. |
| 1 | 14493 | |
Hs.576612 | Ectonucleoside triphosphate diphosphohydrolase 1. |
| 1 | 14493 | |
Hs.568340 | DENN/MADD domain containing 1A. |
| 1 | 14493 | |
Hs.553221 | IKAROS family zinc finger 4 (Eos). |
| 1 | 14493 | |
Hs.534312 | Torsin family 1, member A (torsin A). |
| 1 | 14493 | |
Hs.529488 | Solute carrier family 6 (neurotransmitter transporter, taurine), member 6. |
| 1 | 14493 | |
Hs.528605 | PP12104. |
| 1 | 14493 | |
Hs.522384 | F-box protein 42. |
| 1 | 14493 | |
Hs.518417 | Syntaxin 6. |
| 1 | 14493 | |
Hs.512651 | Ataxin 7-like 3. |
| 1 | 14493 | |
Hs.466471 | Glucose phosphate isomerase. |
| 1 | 14493 | |
Hs.461819 | Vacuolar protein sorting 53 homolog (S. cerevisiae). |
| 1 | 14493 | |
Hs.461200 | Clone HLS_IMAGE_136933 mRNA sequence. |
| 1 | 14493 | |
Hs.460238 | SH3-domain GRB2-like endophilin B2. |
| 1 | 14493 | |
Hs.460124 | PHD finger protein 19. |
| 1 | 14493 | |
Hs.458272 | Myeloperoxidase. |
| 1 | 14493 | |
Hs.440898 | Ficolin (collagen/fibrinogen domain containing) 1. |
| 1 | 14493 | |
Hs.440497 | Potassium voltage-gated channel, shaker-related subfamily, beta member 2. |
| 1 | 14493 | |
Hs.440382 | Tripartite motif-containing 27. |
| 1 | 14493 | |
Hs.436093 | HLA-B associated transcript 2. |
| 1 | 14493 | |
Hs.43322 | Protein kinase, AMP-activated, alpha 1 catalytic subunit. |
| 1 | 14493 | |
Hs.408458 | WW domain containing E3 ubiquitin protein ligase 2. |
| 1 | 14493 | |
Hs.386225 | Glycogen synthase 1 (muscle). |
| 1 | 14493 | |
Hs.368610 | 3'-phosphoadenosine 5'-phosphosulfate synthase 1. |
| 1 | 14493 | |
Hs.365286 | Family with sequence similarity 21, member C. |
| 1 | 14493 | |
Hs.34871 | Zinc finger E-box binding homeobox 2. |
| 1 | 14493 | |
Hs.334637 | Hydrogen voltage-gated channel 1. |
| 1 | 14493 | |
Hs.270291 | Actinin, alpha 4. |
| 1 | 14493 | |
Hs.262857 | Prune homolog 2 (Drosophila). |
| 1 | 14493 | |
Hs.254042 | HLA-B associated transcript 1. |
| 1 | 14493 | |
Hs.249441 | WEE1 homolog (S. pombe). |
| 1 | 14493 | |
Hs.24301 | Polymerase (RNA) II (DNA directed) polypeptide E, 25kDa. |
| 1 | 14493 | |
Hs.234742 | Lactoperoxidase. |
| 1 | 14493 | |
Hs.195464 | Filamin A, alpha (actin binding protein 280). |
| 1 | 14493 | |
Hs.181244 | Major histocompatibility complex, class I, A. |
| 1 | 14493 | |
Hs.144725 | GRAM domain containing 1B. |
| 1 | 14493 | |
Hs.128420 | Vacuolar protein sorting 4 homolog A (S. cerevisiae). |
| 1 | 14493 | |
Hs.127022 | Protein tyrosine phosphatase, receptor type, E. |
| 1 | 14493 | |
Hs.126517 | CD55 molecule, decay accelerating factor for complement (Cromer blood group). |
| 1 | 14493 | |
Hs.118076 | Ribosomal protein S4, X-linked. |
| 1 | 14493 | |
Hs.113287 | Discs, large (Drosophila) homolog-associated protein 2. |
| 1 | 14493 | |
Hs.106019 | Protein phosphatase 1, regulatory (inhibitor) subunit 10. |
Source: NCBI UniGene
EST Sequences
132 EST sequences from this library have been submitted to the public sequence database as of 05-Jan-2009.
Source: NCBI GenBank
Click the button to save sequences to a file (FASTA format)
Keywords
- blood
- leukemia
- adult
- flow sorted
Source: NCBI Clone Registry
References
Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. Dias Neto E, et al., Proc Natl Acad Sci U S A 97, 3491-3496 (2000).