NCBI logo

Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.20 [Feb-08-2009]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter View option    
Masking character option     Masking color option    
Show CDS translation

Sequence 1: gi|50171|biliary glycoprotein [Mus musculus] >gi|399117|sp|P31809.1|CEAM1_MOUSE RecName: Full=Carcinoembryonic antigen-related cell adhesion molecule 1; AltName: Full=Biliary glycoprotein 1; Short=BGP-1; AltName: Full=Murine hepatitis virus receptor; Short=MHV-R; AltName: Full=MHVR1; AltName: Full=Biliary glycoprotein D; AltName: CD_antigen=CD66a; Flags: Precursor
Length = 521 (1 .. 521)

Sequence 2: gi|19923195|carcinoembryonic antigen-related cell adhesion molecule 1 isoform 1 precursor [Homo sapiens] >gi|399116|sp|P13688.2|CEAM1_HUMAN RecName: Full=Carcinoembryonic antigen-related cell adhesion molecule 1; AltName: Full=Biliary glycoprotein 1; Short=BGP-1; AltName: CD_antigen=CD66a; Flags: Precursor >gi|37198|emb|CAA34404.1| TM1-CEA preprotein [Homo sapiens] >gi|179440|gb|AAA51826.1| biliary glycoprotein I precursor >gi|3172148|gb|AAC18434.1| BGP1_HUMAN [Homo sapiens] >gi|114731576|gb|ABI75349.1| carcinoembry...
Length = 526 (1 .. 526)





2 1

NOTE:Bitscore and expect value are calculated based on the size of the nr database.





 Score =  570 bits (1468),  Expect = 3e-160
 Identities = 300/524 (57%), Positives = 372/524 (70%), Gaps = 9/524 (1%)

Query  5    SAHLHKGQVPWGGLLLTASLLASWSPATTAEVTIEAVPPQVAEDNNVLLLVHNLPLALGA  64
            SA LH+ +VPW GLLLTASLL  W+P TTA++T E++P  VAE   VLLLVHNLP  L  
Sbjct  5    SAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQQLFG  64

Query  65   FAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLDM  124
            ++WYKG     +++I  +   +     G A SGRE IY N SLL Q +T  D G YTL +
Sbjct  65   YSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFYTLQV  124

Query  125  TDENYRRTQATVRFHVHPILLKPNITSNNSNPVEGDDSVSLTCDSYTDPDNINYLWSRNG  184
               +    +AT +FHV+P L KP+I+SNNSNPVE  D+V+ TC+  T   +  YLW  N 
Sbjct  125  IKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQ--DTTYLWWINN  182

Query  185  ESLSEGDRLKLSEGNRTLTLLNVTRNDTGPYVCETRNPVSVNRSDPFSLNIIYGPDTPII  244
            +SL    RL+LS GNRTLTLL+VTRNDTGPY CE +NPVS NRSDP +LN+ YGPDTP I
Sbjct  183  QSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTPTI  242

Query  245  SPSDIYLHPGSNLNLSCHAASNPPAQYFWLINEKPHASSQELFIPNITTNNSGTYTCFVN  304
            SPSD Y  PG+NL+LSC+AASNPPAQY WLIN     S+QELFIPNIT NNSG+YTC  N
Sbjct  243  SPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCHAN  302

Query  305  NSVTGLSRTTVKNITVLE---PVTQPFLQVTNTTVK-ELDSVTLTCLSNDIGANIQWLFN  360
            NSVTG +RTTVK I V E    V +P ++ + TTV  + DSV LTC +ND G +I+W F 
Sbjct  303  NSVTGCNRTTVKTIIVTELSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFK  362

Query  361  SQSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFD--PTQ  418
            +QSL  +ERM LSQ N+ L I+P+KREDAG Y CE+ NP+S  +S+ I L++ ++  P +
Sbjct  363  NQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQE  422

Query  419  GGLSDGAIAGIVIGVVAGVALIA-GLAYFLYSRKSGGGSDQRDLTEHKPSTSNHNLAPSD  477
             GLS GAIAGIVIGVVA VALIA  LA FL+  K+G  SDQRDLTEHKPS SNH    S+
Sbjct  423  NGLSPGAIAGIVIGVVALVALIAVALACFLHFGKTGRASDQRDLTEHKPSVSNHTQDHSN  482

Query  478  NSPNKVDDVAYTVLNFNSQQPNRPTSAPSSPRATETVYSEVKKK  521
            + PNK+++V Y+ LNF +QQP +PTSA  S  ATE +YSEVKK+
Sbjct  483  DPPNKMNEVTYSTLNFEAQQPTQPTSASPSLTATEIIYSEVKKQ  526


CPU time:     0.06 user secs.	    0.05 sys. secs	    0.11 total secs.