Normalized rat placenta, Bento Soares

Library Description

Source: Lee, NH, The Institute for Genomic Research

Gene Content Analysis

4,630 ESTs from this library were grouped into 3,187 UniGene entries (putative genes) [UniGene build #179, 05-Feb-2009]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs	TPM		UniGene Entry
2	432		Rn.22173	Mitochondrial ribosomal protein S31.
2	432		Rn.22136	Similar to DNA segment, Chr 4, ERATO Doi 22, expressed.
2	432		Rn.220516	NFKB inhibitor interacting Ras-like 2.
2	432		Rn.220384	Transcribed locus.
2	432		Rn.220342	Transcribed locus, moderately similar to NP_904330.1 cytochrome c oxidase subunit I [Mus musculus].
2	432		Rn.220272	Transcribed locus.
2	432		Rn.21984	Potassium channel, subfamily K, member 2.
2	432		Rn.219240	Enhancer of polycomb homolog 1 (Drosophila).
2	432		Rn.2190	Similar to RIKEN cDNA 0610038D11.
2	432		Rn.217967	Transcribed locus.
2	432		Rn.216663	Transcribed locus.
2	432		Rn.216495	Transcribed locus, strongly similar to NP_001103622.1 prefoldin 4 isoform 1 [Mus musculus].
2	432		Rn.216486	Thymidine kinase 1, soluble.
2	432		Rn.216291	Transcribed locus.
2	432		Rn.21433	Oligonucleotide/oligosaccharide-binding fold containing 2A.
2	432		Rn.2143	Translocase of outer mitochondrial membrane 20 homolog (yeast).
2	432		Rn.21240	Glutamyl-prolyl-tRNA synthetase.
2	432		Rn.2091	CD9 molecule.
2	432		Rn.209064	Similar to chromosome 7 open reading frame 23.
2	432		Rn.2083	Splicing factor 3b, subunit 5.
2	432		Rn.20571	B-cell CLL/lymphoma 6.
2	432		Rn.205053	Transcribed locus.
2	432		Rn.204884	Transcribed locus.
2	432		Rn.20448	Natural killer cell group 7 sequence.
2	432		Rn.20445	Formin binding protein 1.
2	432		Rn.20397	Transcribed locus.
2	432		Rn.203869	Transcribed locus, strongly similar to XP_240330.4 PREDICTED: similar to nischarin [Rattus norvegicus].
2	432		Rn.20376	Transcribed locus.
2	432		Rn.203542	General transcription factor IIH, polypeptide 3.
2	432		Rn.203304	Transcribed locus.
2	432		Rn.203300	Similar to Antxr2 protein.
2	432		Rn.203299	Transcribed locus.
2	432		Rn.203259	Transcribed locus.
2	432		Rn.203242	Family with sequence similarity 172, member A.
2	432		Rn.203200	Transcribed locus.
2	432		Rn.203194	Transcribed locus.
2	432		Rn.203046	LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae).
2	432		Rn.203016	Lymphotoxin beta (TNF superfamily, member 3).
2	432		Rn.202620	CCAAT/enhancer binding protein (C/EBP), delta.
2	432		Rn.2024	Protein phosphatase 1, catalytic subunit, alpha isoform.
2	432		Rn.201800	Microtubule-actin crosslinking factor 1.
2	432		Rn.201790	DEAD (Asp-Glu-Ala-Asp) box polypeptide 21b.
2	432		Rn.201759	Cell division cycle associated 7 like.
2	432		Rn.201711	Ribosomal protein S7.
2	432		Rn.201628	Transcribed locus.
2	432		Rn.201501	Regulatory factor X-associated ankyrin-containing protein.
2	432		Rn.201360	Transcribed locus, strongly similar to NP_001007604.1 ribosomal protein S20 [Rattus norvegicus].
2	432		Rn.2011	Peroxiredoxin 3.
2	432		Rn.20030	B lymphoid tyrosine kinase.
2	432		Rn.20	Protein kinase, cAMP-dependent, catalytic, alpha.
2	432		Rn.1997	Cathepsin H.
2	432		Rn.19932	Dispatched homolog 2 (Drosophila).
2	432		Rn.199308	Transcribed locus.
2	432		Rn.199024	Histone cluster 1, H2bh.
2	432		Rn.198910	Hematological and neurological expressed 1.
2	432		Rn.198325	Proteasome (prosome, macropain) activator subunit 3.
2	432		Rn.1975	Cd81 molecule.
2	432		Rn.19717	Down syndrome critical region gene 3.
2	432		Rn.196161	Transcribed locus.
2	432		Rn.19608	Transcribed locus.
2	432		Rn.19523	Mitogen-activated protein kinase kinase kinase 7 interacting protein 2.
2	432		Rn.194991	Centromere protein T.
2	432		Rn.19332	Solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1.
2	432		Rn.19289	Ubiquitination factor E4B.
2	432		Rn.190571	Liver regeneration-specifique protein (107 bp).
2	432		Rn.18985	Protein tyrosine phosphatase, non-receptor type 6.
2	432		Rn.186897	Transcribed locus.
2	432		Rn.18545	TNFRSF1A-associated via death domain.
2	432		Rn.18504	Karyopherin (importin) alpha 3.
2	432		Rn.18496	N-myc (and STAT) interactor.
2	432		Rn.1844	Myosin regulatory light chain interacting protein.
2	432		Rn.1842	Transcribed locus.
2	432		Rn.183922	Transcribed locus.
2	432		Rn.18349	Signal recognition particle receptor ('docking protein').
2	432		Rn.1829	Transcobalamin 2.
2	432		Rn.18066	Transcribed locus.
2	432		Rn.179110	Transcribed locus.
2	432		Rn.17909	Free fatty acid receptor 2.
2	432		Rn.17900	Transcribed locus.
2	432		Rn.17895	Rho GTPase activating protein 27.
2	432		Rn.17881	Ubiquitin specific peptidase 38.
2	432		Rn.17879	Transcribed locus.
2	432		Rn.17848	Transcribed locus.
2	432		Rn.17843	Butyrophilin-like 7.
2	432		Rn.17785	Ubiquilin 4.
2	432		Rn.1774	Aldolase A, fructose-bisphosphate.
2	432		Rn.17628	RNA binding motif protein 38.
2	432		Rn.1762	Calnexin.
2	432		Rn.17493	S-adenosylhomocysteine hydrolase-like 1.
2	432		Rn.172940	Transcribed locus.
2	432		Rn.17233	Transcribed locus.
2	432		Rn.17226	Downstream neighbor of SON.
2	432		Rn.17118	CDNA clone IMAGE:7461677.
2	432		Rn.170542	Glycerophosphodiester phosphodiesterase 1.
2	432		Rn.17054	Phenylalanyl-tRNA synthetase, beta subunit.
2	432		Rn.16968	Retinol dehydrogenase 10 (all-trans).
2	432		Rn.1696	Tetraspanin 33.
2	432		Rn.16949	YTH domain family, member 1.
2	432		Rn.16849	Ring finger protein 146.
2	432		Rn.167316	Hypothetical protein LOC689663.

Source: NCBI UniGene

EST Sequences

5,179 EST sequences from this library have been submitted to the public sequence database as of 05-Feb-2009.

Source: NCBI GenBank

Click the button to save sequences to a file (FASTA format)

Keywords

• placenta
• adult
• female
• normalized

Source: NCBI Clone Registry