Kingdom |
Category |
Genus/Species |
Count |
|
  |
  |
115 |
Archaea |
  |
  |
11 |
  |
|
  |
115 |
  |
Euryarchaeota |
  |
11 |
  |
  |
Methanosarcina acetivorans (mac) |
3 |
  |
  |
Methanosarcina barkeri (mba) |
1 |
  |
  |
Candidatus Methanoregula boonei (mbn) |
1 |
  |
  |
Methanococcoides burtonii (mbu) |
1 |
  |
  |
Methanospirillum hungatei (mhu) |
1 |
  |
  |
Methanopyrus kandleri (mka) |
1 |
  |
  |
Methanosarcina mazei (mma) |
2 |
  |
  |
Uncultured methanogenic archaeon RC-I (rci) |
1 |
Bacteria |
  |
  |
2517 |
  |
Acidobacteria |
  |
3 |
  |
  |
Acidobacteria bacterium (aba) |
1 |
  |
  |
Solibacter usitatus (sus) |
2 |
  |
Actinobacteria |
  |
5 |
  |
  |
Acidothermus cellulolyticus (ace) |
1 |
  |
  |
Frankia alni (fal) |
1 |
  |
  |
Frankia sp. EAN1pec (fre) |
1 |
  |
  |
Rubrobacter xylanophilus (rxy) |
2 |
  |
Bacteroides |
  |
13 |
  |
  |
Bacteroides thetaiotaomicron (bth) |
4 |
  |
  |
Bacteroides vulgatus (bvu) |
1 |
  |
  |
Cytophaga hutchinsonii (chu) |
1 |
  |
  |
Flavobacterium johnsoniae (fjo) |
2 |
  |
  |
Flavobacterium psychrophilum (fps) |
1 |
  |
  |
Parabacteroides distasonis (pdi) |
2 |
  |
  |
Porphyromonas gingivalis W83 (pgi) |
2 |
  |
Cyanobacteria |
  |
37 |
  |
  |
Acaryochloris marina (amr) |
2 |
  |
  |
Anabaena sp. PCC7120 (ana) |
8 |
  |
  |
Anabaena variabilis (ava) |
3 |
  |
  |
Cyanobacteria Yellowstone B-Prime (cyb) |
1 |
  |
  |
Cyanothece sp. ATCC 51142 (cyt) |
1 |
  |
  |
Gloeobacter violaceus (gvi) |
4 |
  |
  |
Microcystis aeruginosa (mar) |
7 |
  |
  |
Nostoc punctiforme (npu) |
3 |
  |
  |
Prochlorococcus marinus SS120 (pma) |
1 |
  |
  |
Prochlorococcus marinus MIT9313 (pmt) |
1 |
  |
  |
Synechococcus elongatus PCC7942 (syf) |
1 |
  |
  |
Synechococcus sp. PCC7002 (syp) |
2 |
  |
  |
Trichodesmium erythraeum (ter) |
3 |
  |
Firmicutes |
  |
49 |
  |
  |
Alkaliphilus metalliredigens (amt) |
31 |
  |
  |
Bacillus clausii (bcl) |
1 |
  |
  |
Clostridium beijerinckii (cbe) |
1 |
  |
  |
Clostridium phytofermentans (cpy) |
1 |
  |
  |
Desulfotomaculum reducens (drm) |
1 |
  |
  |
Desulfitobacterium hafniense (dsy) |
2 |
  |
  |
Geobacillus kaustophilus (gka) |
1 |
  |
  |
Lactobacillus gasseri (lga) |
1 |
  |
  |
Moorella thermoacetica (mta) |
1 |
  |
  |
Natranaerobius thermophilus (nth) |
3 |
  |
  |
Pelotomaculum thermopropionicum (pth) |
2 |
  |
  |
Staphylococcus aureus Newman (sae) |
1 |
  |
  |
Staphylococcus aureus MRSA252 (sar) |
1 |
  |
  |
Thermoanaerobacter pseudethanolicus (tpd) |
1 |
  |
  |
Thermoanaerobacter tengcongensis (tte) |
1 |
  |
Green nonsulfur bacteria |
  |
7 |
  |
  |
Chloroflexus aurantiacus (cau) |
1 |
  |
  |
Herpetosiphon aurantiacus (hau) |
1 |
  |
  |
Roseiflexus castenholzii DSM13941 (rca) |
3 |
  |
  |
Roseiflexus sp. RS-1 (rrs) |
2 |
  |
Green sulfur bacteria |
  |
2225 |
  |
  |
Chlorobium chlorochromatii (cch) |
56 |
  |
  |
Chlorobium limicola (cli) |
1094 |
  |
  |
Chlorobaculum parvum NCIB 8327 (cpc) |
53 |
  |
  |
Chlorobaculum tepidum (cte) |
33 |
  |
  |
Chloroherpeton thalassium (cts) |
10 |
  |
  |
Prosthecochloris aestuarii (paa) |
63 |
  |
  |
Pelodictyon luteolum (plt) |
81 |
  |
  |
Pelodictyon phaeoclathratiforme (pph) |
788 |
  |
  |
Prosthecochloris vibrioformis (pvi) |
47 |
  |
Hyperthermophilic bacteria |
  |
7 |
  |
  |
Dictyoglomus thermophilum (dth) |
1 |
  |
  |
Petrotoga mobilis (pmo) |
1 |
  |
  |
Sulfurihydrogenibium sp. YO3AOP1 (sul) |
1 |
  |
  |
Thermotoga lettingae (tle) |
1 |
  |
  |
Thermotoga sp. RQ2 (trq) |
2 |
  |
  |
Thermodesulfovibrio yellowstonii (tye) |
1 |
  |
Planctomyces |
  |
2 |
  |
  |
Rhodopirellula baltica (rba) |
2 |
  |
Proteobacteria |
  |
160 |
  |
  |
Acidovorax avenae (aav) |
1 |
  |
  |
Acinetobacter baumannii SDF (abm) |
1 |
  |
  |
Acinetobacter baumannii AYE (aby) |
1 |
  |
  |
Acidiphilium cryptum JF-5 (acr) |
1 |
  |
  |
Acidithiobacillus ferrooxidans (afe) |
3 |
  |
  |
Anaeromyxobacter sp. Fw109-5 (afw) |
2 |
  |
  |
Aeromonas hydrophila (aha) |
1 |
  |
  |
Acidovorax sp. JS42 (ajs) |
2 |
  |
  |
Azoarcus sp. BH72 (azo) |
1 |
  |
  |
Bordetella bronchiseptica (bbr) |
1 |
  |
  |
Bradyrhizobium sp. BTAi1 (bbt) |
1 |
  |
  |
Beijerinckia indica (bid) |
2 |
  |
  |
Bradyrhizobium japonicum (bja) |
1 |
  |
  |
Bordetella parapertussis (bpa) |
2 |
  |
  |
Burkholderia phymatum (bph) |
2 |
  |
  |
Burkholderia pseudomallei 1106a (bpl) |
1 |
  |
  |
Burkholderia pseudomallei K96243 (bps) |
1 |
  |
  |
Burkholderia sp. 383 (bur) |
1 |
  |
  |
Burkholderia vietnamiensis (bvi) |
1 |
  |
  |
Caulobacter crescentus (ccr) |
1 |
  |
  |
Cellvibrio japonicus (cja) |
2 |
  |
  |
Citrobacter koseri ATCC BAA-895 (cko) |
1 |
  |
  |
Cupriavidus taiwanensis (cti) |
1 |
  |
  |
Chromobacterium violaceum (cvi) |
1 |
  |
  |
Dechloromonas aromatica (dar) |
1 |
  |
  |
Dinoroseobacter shibae (dsh) |
1 |
  |
  |
Desulfovibrio vulgaris DP4 (dvl) |
1 |
  |
  |
Azoarcus sp. EbN1 (eba) |
3 |
  |
  |
Erwinia tasmaniensis (eta) |
1 |
  |
  |
Francisella philomiragia (fph) |
1 |
  |
  |
Geobacter bemidjiensis (gbm) |
3 |
  |
  |
Geobacter lovleyi (glo) |
11 |
  |
  |
Geobacter metallireducens (gme) |
4 |
  |
  |
Geobacter uraniumreducens (gur) |
2 |
  |
  |
Herminiimonas arsenicoxydans (har) |
1 |
  |
  |
Hahella chejuensis (hch) |
1 |
  |
  |
Halorhodospira halophila (hha) |
2 |
  |
  |
Helicobacter pylori G27 (hpg) |
1 |
  |
  |
Idiomarina loihiensis (ilo) |
1 |
  |
  |
Jannaschia sp. CCS1 (jan) |
1 |
  |
  |
Leptothrix cholodnii (lch) |
3 |
  |
  |
Legionella pneumophila Lens (lpf) |
1 |
  |
  |
Magnetospirillum magneticum (mag) |
1 |
  |
  |
Marinobacter aquaeolei (maq) |
1 |
  |
  |
Methylococcus capsulatus (mca) |
2 |
  |
  |
Mesorhizobium sp. BNC1 (mes) |
2 |
  |
  |
Magnetococcus sp. MC-1 (mgm) |
3 |
  |
  |
Mesorhizobium loti (mlo) |
1 |
  |
  |
Maricaulis maris (mmr) |
1 |
  |
  |
Minibacterium massiliensis (mms) |
2 |
  |
  |
Methylobacterium populi (mpo) |
1 |
  |
  |
Methylibium petroleiphilum (mpt) |
3 |
  |
  |
Myxococcus xanthus (mxa) |
1 |
  |
  |
Nitrosomonas eutropha (net) |
1 |
  |
  |
Nitrosomonas europaea (neu) |
1 |
  |
  |
Nitrobacter hamburgensis (nha) |
1 |
  |
  |
Neisseria meningitidis FAM18 (serogroup C) (nmc) |
1 |
  |
  |
Nitrosospira multiformis (nmu) |
1 |
  |
  |
Nitrosococcus oceani (noc) |
1 |
  |
  |
Nitrobacter winogradskyi (nwi) |
2 |
  |
  |
Ochrobactrum anthropi (oan) |
1 |
  |
  |
Pelobacter carbinolicus (pca) |
5 |
  |
  |
Paracoccus denitrificans (pde) |
1 |
  |
  |
Psychromonas ingrahamii (pin) |
1 |
  |
  |
Photorhabdus luminescens (plu) |
2 |
  |
  |
Pasteurella multocida (pmu) |
2 |
  |
  |
Pseudomonas mendocina (pmy) |
1 |
  |
  |
Polaromonas sp. JS666 (pol) |
2 |
  |
  |
Pelobacter propionicus (ppd) |
4 |
  |
  |
Pseudomonas putida F1 (ppf) |
1 |
  |
  |
Pseudomonas stutzeri (psa) |
2 |
  |
  |
Pseudomonas syringae pv. syringae B728a (psb) |
1 |
  |
  |
Phenylobacterium zucineum (pzu) |
1 |
  |
  |
Rickettsia bellii OSU 85-389 (rbo) |
1 |
  |
  |
Rhizobium etli CIAT 652 (rec) |
3 |
  |
  |
Rhodoferax ferrireducens (rfr) |
2 |
  |
  |
Sorangium cellulosum (scl) |
3 |
  |
  |
Syntrophobacter fumaroxidans (sfu) |
8 |
  |
  |
Sinorhizobium meliloti (sme) |
1 |
  |
  |
Stenotrophomonas maltophilia (sml) |
2 |
  |
  |
Stenotrophomonas maltophilia R551-3 (smt) |
2 |
  |
  |
Shewanella oneidensis (son) |
2 |
  |
  |
Shewanella pealeana (spl) |
1 |
  |
  |
Sulfurovum sp. NBC37-1 (sun) |
2 |
  |
  |
Shewanella woodyi ATCC51908 (swd) |
1 |
  |
  |
Sphingomonas wittichii (swi) |
2 |
  |
  |
Thiobacillus denitrificans (tbd) |
1 |
  |
  |
Verminephrobacter eiseniae (vei) |
1 |
  |
  |
Vibrio fischeri (vfi) |
1 |
  |
  |
Vibrio harveyi (vha) |
1 |
  |
  |
Xanthomonas campestris pv. vesicatoria (xcv) |
2 |
  |
  |
Xanthomonas oryzae PXO99A (xop) |
1 |
  |
  |
Yersinia enterocolitica (yen) |
1 |
  |
  |
Yersinia pestis Angola (ypg) |
1 |
  |
Spirochete |
  |
3 |
  |
  |
Leptospira biflexa serovar Patoc Patoc 1 (Ames) (lbf) |
2 |
  |
  |
Treponema denticola (tde) |
1 |
  |
Synergistetes |
  |
2 |
  |
  |
Caldicellulosiruptor saccharolyticus (csc) |
2 |
  |
Tenericutes |
  |
1 |
  |
  |
Ureaplasma parvum serovar 3 ATCC 27815 (upa) |
1 |
  |
Termite group |
  |
1 |
  |
  |
Uncultured Termite group 1 bacterium phylotype Rs-D17 (rsd) |
1 |
  |
Verrucomicrobia |
  |
2 |
  |
  |
Opitutus terrae (ote) |
2 |
Eukaryotes |
  |
  |
7 |
  |
Animals |
  |
3 |
  |
  |
Bos taurus (cow) (bta) |
1 |
  |
  |
Ornithorhynchus anatinus (platypus) (oaa) |
1 |
  |
  |
Rattus norvegicus (rat) (rno) |
1 |
  |
Protists |
  |
4 |
  |
  |
Entamoeba histolytica (ehi) |
1 |
  |
  |
Trypanosoma cruzi (tcr) |
1 |
  |
  |
Trichomonas vaginalis (tva) |
2 |
NULL |
  |
  |
0 |
TOTAL |
  |
  |
2650 |