| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
84 |
| Archaea |
|
|
36 |
| |
|
|
84 |
| |
Crenarchaeota |
|
3 |
| |
|
Nitrosopumilus maritimus (nmr) |
2 |
| |
|
Thermofilum pendens (tpe) |
1 |
| |
Euryarchaeota |
|
32 |
| |
|
Methanosarcina acetivorans (mac) |
4 |
| |
|
Methanosarcina barkeri (mba) |
4 |
| |
|
Candidatus Methanoregula boonei (mbn) |
1 |
| |
|
Methanococcoides burtonii (mbu) |
1 |
| |
|
Methanococcus jannaschii (mja) |
2 |
| |
|
Methanocorpusculum labreanum (mla) |
3 |
| |
|
Methanosarcina mazei (mma) |
2 |
| |
|
Methanococcus maripaludis S2 (mmp) |
1 |
| |
|
Methanococcus maripaludis C6 (mmx) |
1 |
| |
|
Methanobrevibacter smithii ATCC 35061 (msi) |
1 |
| |
|
Methanosphaera stadtmanae (mst) |
1 |
| |
|
Methanococcus vannielii (mvn) |
1 |
| |
|
Natronomonas pharaonis (nph) |
1 |
| |
|
Pyrococcus furiosus (pfu) |
1 |
| |
|
Pyrococcus horikoshii (pho) |
1 |
| |
|
Picrophilus torridus (pto) |
1 |
| |
|
Uncultured methanogenic archaeon RC-I (rci) |
5 |
| |
|
Thermococcus kodakaraensis (tko) |
1 |
| |
Korarchaeota |
|
1 |
| |
|
Candidatus Korarchaeum cryptofilum (kcr) |
1 |
| Bacteria |
|
|
2699 |
| |
Actinobacteria |
|
15 |
| |
|
Arthrobacter aurescens (aau) |
3 |
| |
|
Bifidobacterium longum NCC2705 (blo) |
1 |
| |
|
Corynebacterium efficiens (cef) |
1 |
| |
|
Frankia sp. EAN1pec (fre) |
1 |
| |
|
Kineococcus radiotolerans (kra) |
1 |
| |
|
Nocardioides sp. JS614 (nca) |
1 |
| |
|
Rhodococcus sp. RHA1 (rha) |
1 |
| |
|
Saccharopolyspora erythraea (sen) |
3 |
| |
|
Streptomyces griseus (sgr) |
2 |
| |
|
Streptomyces avermitilis (sma) |
1 |
| |
Bacteroides |
|
7 |
| |
|
Flavobacterium johnsoniae (fjo) |
2 |
| |
|
Gramella forsetii (gfo) |
1 |
| |
|
Parabacteroides distasonis (pdi) |
1 |
| |
|
Porphyromonas gingivalis W83 (pgi) |
1 |
| |
|
Porphyromonas gingivalis ATCC 33277 (pgn) |
1 |
| |
|
Salinibacter ruber (sru) |
1 |
| |
Cyanobacteria |
|
2 |
| |
|
Nostoc punctiforme (npu) |
1 |
| |
|
Trichodesmium erythraeum (ter) |
1 |
| |
Firmicutes |
|
2505 |
| |
|
Alkaliphilus metalliredigens (amt) |
1523 |
| |
|
Bacillus anthracis Sterne (bat) |
5 |
| |
|
Bacillus amyloliquefaciens (bay) |
2 |
| |
|
Bacillus cereus ATCC 10987 (bca) |
4 |
| |
|
Bacillus cereus ATCC 14579 (bce) |
6 |
| |
|
Bacillus clausii (bcl) |
8 |
| |
|
Bacillus cereus subsp. cytotoxis NVH 391-98 (bcy) |
8 |
| |
|
Bacillus cereus ZK (bcz) |
8 |
| |
|
Bacillus halodurans (bha) |
14 |
| |
|
Bacillus licheniformis DSM13 (bld) |
12 |
| |
|
Bacillus pumilus (bpu) |
7 |
| |
|
Bacillus subtilis (bsu) |
3 |
| |
|
Bacillus thuringiensis 97-27 (btk) |
3 |
| |
|
Bacillus thuringiensis Al Hakam (btl) |
5 |
| |
|
Bacillus weihenstephanensis (bwe) |
9 |
| |
|
Clostridium acetobutylicum (cac) |
28 |
| |
|
Clostridium botulinum B1 Okra (cbb) |
14 |
| |
|
Clostridium beijerinckii (cbe) |
51 |
| |
|
Clostridium botulinum F Langeland (cbf) |
29 |
| |
|
Clostridium botulinum A Hall (cbh) |
19 |
| |
|
Clostridium botulinum B Eklund 17B (cbk) |
18 |
| |
|
Clostridium botulinum A3 Loch Maree (cbl) |
22 |
| |
|
Clostridium botulinum A ATCC 3502 (cbo) |
20 |
| |
|
Clostridium botulinum E3 (cbt) |
21 |
| |
|
Clostridium difficile (cdf) |
72 |
| |
|
Carboxydothermus hydrogenoformans (chy) |
9 |
| |
|
Clostridium kluyveri (ckl) |
37 |
| |
|
Clostridium novyi (cno) |
28 |
| |
|
Clostridium perfringens 13 (cpe) |
1 |
| |
|
Clostridium perfringens ATCC 13124 (cpf) |
10 |
| |
|
Coprothermobacter proteolyticus (cpo) |
2 |
| |
|
Clostridium perfringens SM101 (cpr) |
16 |
| |
|
Clostridium phytofermentans (cpy) |
66 |
| |
|
Clostridium tetani E88 (ctc) |
58 |
| |
|
Clostridium thermocellum (cth) |
60 |
| |
|
Candidatus Desulforudis audaxviator (dau) |
1 |
| |
|
Desulfotomaculum reducens (drm) |
27 |
| |
|
Desulfitobacterium hafniense (dsy) |
82 |
| |
|
Enterococcus faecalis (efa) |
9 |
| |
|
Exiguobacterium sibiricum (esi) |
1 |
| |
|
Finegoldia magna (fma) |
11 |
| |
|
Geobacillus kaustophilus (gka) |
9 |
| |
|
Geobacillus thermodenitrificans (gtn) |
7 |
| |
|
Heliobacterium modesticaldum (hmo) |
15 |
| |
|
Lactobacillus casei ATCC 334 (lca) |
1 |
| |
|
Listeria innocua (lin) |
2 |
| |
|
Listeria monocytogenes F2365 (lmf) |
2 |
| |
|
Listeria monocytogenes EGD-e (lmo) |
3 |
| |
|
Lactobacillus reuteri F275 (Kitasato) (lrf) |
1 |
| |
|
Lactobacillus salivarius (lsl) |
1 |
| |
|
Lysinibacillus sphaericus (lsp) |
11 |
| |
|
Listeria welshimeri SLCC5334 (lwe) |
3 |
| |
|
Moorella thermoacetica (mta) |
5 |
| |
|
Natranaerobius thermophilus (nth) |
20 |
| |
|
Oceanobacillus iheyensis (oih) |
9 |
| |
|
Pediococcus pentosaceus (ppe) |
1 |
| |
|
Pelotomaculum thermopropionicum (pth) |
9 |
| |
|
Staphylococcus aureus JH1 (sah) |
1 |
| |
|
Staphylococcus epidermidis ATCC 12228 (sep) |
1 |
| |
|
Staphylococcus epidermidis RP62A (ser) |
1 |
| |
|
Streptococcus mutans (smu) |
1 |
| |
|
Streptococcus pyogenes MGAS10394 (serotype M6) (spa) |
1 |
| |
|
Streptococcus pyogenes MGAS10750 (serotype M3) (spi) |
1 |
| |
|
Streptococcus pyogenes MGAS2096 (serotype M3) (spj) |
1 |
| |
|
Streptococcus pneumoniae CGSP14 (spw) |
1 |
| |
|
Streptococcus pyogenes SF370 (serotype M1) (spy) |
1 |
| |
|
Streptococcus sanguinis (ssa) |
8 |
| |
|
Streptococcus suis 05ZYH33 (ssu) |
2 |
| |
|
Streptococcus suis 98HAH33 (ssv) |
1 |
| |
|
Symbiobacterium thermophilum (sth) |
1 |
| |
|
Streptococcus thermophilus LMG18311 (stl) |
1 |
| |
|
Thermoanaerobacter sp. X514 (tex) |
11 |
| |
|
Thermoanaerobacter pseudethanolicus (tpd) |
26 |
| |
|
Thermoanaerobacter tengcongensis (tte) |
18 |
| |
Fusobacteria |
|
14 |
| |
|
Fusobacterium nucleatum (fnu) |
14 |
| |
Green nonsulfur bacteria |
|
2 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
2 |
| |
Green sulfur bacteria |
|
6 |
| |
|
Chlorobium chlorochromatii (cch) |
1 |
| |
|
Chlorobium limicola (cli) |
1 |
| |
|
Chlorobaculum parvum NCIB 8327 (cpc) |
3 |
| |
|
Chlorobium phaeobacteroides DSM 266 (cph) |
1 |
| |
Hyperthermophilic bacteria |
|
25 |
| |
|
Dictyoglomus thermophilum (dth) |
2 |
| |
|
Fervidobacterium nodosum (fno) |
3 |
| |
|
Petrotoga mobilis (pmo) |
6 |
| |
|
Sulfurihydrogenibium sp. YO3AOP1 (sul) |
1 |
| |
|
Thermotoga lettingae (tle) |
4 |
| |
|
Thermotoga maritima (tma) |
1 |
| |
|
Thermosipho melanesiensis (tme) |
4 |
| |
|
Thermotoga petrophila (tpt) |
1 |
| |
|
Thermotoga sp. RQ2 (trq) |
2 |
| |
|
Thermodesulfovibrio yellowstonii (tye) |
1 |
| |
Proteobacteria |
|
63 |
| |
|
Acidovorax avenae (aav) |
1 |
| |
|
Arcobacter butzleri (abu) |
2 |
| |
|
Acinetobacter baumannii AYE (aby) |
1 |
| |
|
Anaeromyxobacter sp. Fw109-5 (afw) |
1 |
| |
|
Acidovorax sp. JS42 (ajs) |
2 |
| |
|
Azorhizobium caulinodans (azc) |
1 |
| |
|
Azoarcus sp. BH72 (azo) |
1 |
| |
|
Burkholderia cepacia (bam) |
1 |
| |
|
Burkholderia cenocepacia J2315 (bcj) |
1 |
| |
|
Candidatus Blochmannia floridanus (bfl) |
1 |
| |
|
Burkholderia pseudomallei 668 (bpd) |
1 |
| |
|
Bordetella petrii (bpt) |
1 |
| |
|
Candidatus Desulfococcus oleovorans (dol) |
2 |
| |
|
Desulfovibrio vulgaris DP4 (dvl) |
1 |
| |
|
Escherichia coli O157 EC4115 (EHEC) (ecf) |
1 |
| |
|
Escherichia coli APEC O1 (ecv) |
1 |
| |
|
Escherichia coli E24377A (ecw) |
1 |
| |
|
Geobacter metallireducens (gme) |
1 |
| |
|
Geobacter sulfurreducens (gsu) |
1 |
| |
|
Haemophilus influenzae PittGG (hiq) |
1 |
| |
|
Haemophilus somnus 2336 (hsm) |
1 |
| |
|
Idiomarina loihiensis (ilo) |
1 |
| |
|
Legionella pneumophila Lens (lpf) |
1 |
| |
|
Methylobacillus flagellatus (mfa) |
1 |
| |
|
Myxococcus xanthus (mxa) |
1 |
| |
|
Neisseria gonorrhoeae NCCP11945 (ngk) |
1 |
| |
|
Nitratiruptor sp. SB155-2 (nis) |
1 |
| |
|
Neisseria meningitidis MC58 (serogroup B) (nme) |
1 |
| |
|
Pseudoalteromonas atlantica (pat) |
3 |
| |
|
Psychrobacter cryohalolentis (pcr) |
1 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
1 |
| |
|
Psychromonas ingrahamii (pin) |
1 |
| |
|
Photorhabdus luminescens (plu) |
1 |
| |
|
Pelobacter propionicus (ppd) |
1 |
| |
|
Photobacterium profundum (ppr) |
2 |
| |
|
Phenylobacterium zucineum (pzu) |
1 |
| |
|
Rhodopseudomonas palustris BisB18 (rpc) |
1 |
| |
|
Syntrophus aciditrophicus (sat) |
4 |
| |
|
Shigella boydii Sb227 (sbo) |
1 |
| |
|
Sorangium cellulosum (scl) |
1 |
| |
|
Syntrophobacter fumaroxidans (sfu) |
1 |
| |
|
Shewanella halifaxensis (shl) |
1 |
| |
|
Shewanella sp. ANA-3 (shn) |
1 |
| |
|
Serratia proteamaculans (spe) |
1 |
| |
|
Shewanella pealeana (spl) |
1 |
| |
|
Salmonella enterica subsp. enterica serovar Typhi Ty2 (stt) |
1 |
| |
|
Sulfurovum sp. NBC37-1 (sun) |
1 |
| |
|
Vibrio fischeri MJ11 (vfm) |
2 |
| |
|
Vibrio harveyi (vha) |
1 |
| |
|
Vibrio parahaemolyticus (vpa) |
1 |
| |
|
Vibrio vulnificus YJ016 (vvy) |
2 |
| |
|
Xanthobacter autotrophicus (xau) |
1 |
| |
Spirochete |
|
25 |
| |
|
Leptospira interrogans serovar Copenhageni (lic) |
2 |
| |
|
Leptospira interrogans serovar lai (lil) |
1 |
| |
|
Treponema denticola (tde) |
22 |
| |
Synergistetes |
|
30 |
| |
|
Caldicellulosiruptor saccharolyticus (csc) |
12 |
| |
|
Syntrophomonas wolfei (swo) |
18 |
| |
Tenericutes |
|
3 |
| |
|
Acholeplasma laidlawii (acl) |
2 |
| |
|
Phytoplasma AYWB (ayw) |
1 |
| |
Termite group |
|
1 |
| |
|
Elusimicrobium minutum (emi) |
1 |
| |
Verrucomicrobia |
|
1 |
| |
|
Opitutus terrae (ote) |
1 |
| Eukaryotes |
|
|
19 |
| |
Animals |
|
1 |
| |
|
Drosophila willistoni (dwi) |
1 |
| |
Fungi |
|
1 |
| |
|
Aspergillus oryzae (aor) |
1 |
| |
Protists |
|
17 |
| |
|
Dictyostelium discoideum (ddi) |
1 |
| |
|
Entamoeba histolytica (ehi) |
1 |
| |
|
Plasmodium falciparum HB3 (pfh) |
4 |
| |
|
Paramecium tetraurelia (ptm) |
2 |
| |
|
Plasmodium yoelii (pyo) |
3 |
| |
|
Tetrahymena thermophila (tet) |
3 |
| |
|
Trichomonas vaginalis (tva) |
3 |
| NULL |
|
|
0 |
| TOTAL |
|
|
2838 |
![[space]](http://compbio.ornl.gov/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}