Fish Image
U.S. Food & Drug Administration
Seafood Products Research Center
Center for Food Safety & Applied Nutrition
Regulatory Fish Encyclopedia:
IEF Gel Lane Banding Pattern Peak Report Data
Gel Image

Peak Report Data from Isoelectric Focusing for a specimen of:
Pacific Cod  ----  Go to Display Gel Lane Navigator.


FDA Seafood List Scientific Name: Gadus macrocephalus
FDA Seafood List Common Name: Pacific Cod
FDA Seafood List Market Name: Cod (Alaska Cod)
Unique IEF Gel Code: 19930816gel06
Unique Web Code: pch02Srr
Tissue Aliquot Code: gadumacr 003 #2 Gel Analysis Conditions
Gel ImageFish ImageCalibrated Gel Image
Gel ImageFish ImageCalibrated Gel

DISPLAY GEL LANE NAVIGATOR
RETURN TO TOP OF THIS DOCUMENT
Lane a
pI Markers
Lane b
Co-Migrated
Lane c
Specimen
Lane d
pI Markers
Lane e
Co-Migrated
Lane f
Specimen
Lane g
pI Markers
Go to Gel Schematic

 
DISPLAY GEL LANE LETTER: Lane a
DIGITAL REPORT GEL LANE: 1
LANE TYPE: pI Markers
ACTUAL GEL LANE: 1
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
14.55496.10.082816240.5695785.84.74.5549.140.0805644
25.214618.20.16934141.075610.98.95.2145.63.60.169033
35.85248310.17448541.3554913.811.25.852484.40.175578
46.5538548.10.14414761.474611512.26.55384.15.90.140511
56.8541451.80.032293380.4094824.23.46.85414.88.10.0285081
67.3547859.80.073597840.5153855.24.37.35478.23.90.0749507
78.1560575.60.093781271.0905811.198.15604.36.50.0945248
88.4566783.40.087052171.05810.78.78.45667.16.80.087788
98.6571889.80.070786350.5566085.74.68.65718.14.50.0693989
109.377596.90.18540651.7415617.714.49.3775.15.30.186759
PeakCounter: 10
DISPLAY GEL LANE LETTER: Lane b
DIGITAL REPORT GEL LANE: 2
LANE TYPE: Co-Migrated
ACTUAL GEL LANE: 2
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
14.481374.60.075989760.7597442.72.34.48135.260.0711394
24.634607.50.194874206.8026224.420.34.63464.920.50.18734
35.1213316.60.014284320.0457360.20.15.12133.21.80.0142586
45.214518.10.07256340.4363791.61.35.2144.43.50.0696138
55.28315819.70.5367932.9553210.68.85.283158.43.10.532974
65.42318022.50.30538531.6570764.95.423179.53.10.303537
75.71622628.20.42020832.394348.67.15.716226.43.40.392947
85.79923929.80.144994102.268938.26.85.799238.59.60.133625
95.8524730.80.084673830.1270490.50.45.852493.10.0228656
105.95226733.30.020780730.1174130.40.35.952267.63.40.0197644
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
116.03428335.30.054291490.84840432.56.034285.790.0530365
126.1296370.25819120.9010163.22.76.1296.12.10.237801
136.20331639.50.14772841.1097843.36.203314.54.10.152311
146.27933141.30.10530850.9272933.32.86.279331.45.10.102075
156.41235744.60.0493986100.9072053.32.76.412361.410.20.0503316
166.5538447.90.0230406100.403211.41.26.55377.99.60.0237893
176.8541051.20.029115540.2123260.80.66.85409.44.30.0280021
187.3547659.40.11433971.343284.847.35475.96.90.110166
197.46149361.50.0364465130.6194472.21.87.461495.712.60.0277584
208.1559974.80.042366190.5956972.11.88.15601.190.0373328
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
218.4566382.80.058280380.8028042.92.48.45663.580.0567722
228.6571589.30.043280240.3092781.10.98.65714.64.20.0416894
239.377696.90.10433381.289194.63.89.3775.57.50.096921
PeakCounter: 23
DISPLAY GEL LANE LETTER: Lane c
DIGITAL REPORT GEL LANE: 3
LANE TYPE: Specimen
ACTUAL GEL LANE: 3
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
14.479354.40.051039140.3202421.414.47934.43.70.0488524
24.625577.10.242303177.1303232.121.24.62558.417.10.234708
35.12413216.50.003607430.02705960.10.15.124133.33.10.0048851
45.1914217.70.013972130.05930850.30.25.19141.62.60.0130121
55.315919.90.37414153.10531149.25.3158.64.80.36691
65.44118122.60.24073641.79098.15.35.4411804.40.230494
75.73122628.20.29776962.8079812.78.35.731224.85.70.279941
85.81523929.80.12588581.715687.75.15.815236.87.60.128006
95.93326132.60.0208347120.4970442.21.55.933254.711.60.0242711
106.03428135.10.094948681.283325.83.86.034284.47.60.0954079
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
116.09529336.60.13774730.5867812.61.76.095292.83.10.107696
126.17630938.60.11658250.9773624.42.96.176309.84.70.117725
136.26732740.80.097809171.1196153.36.267328.26.80.0931754
146.40835544.30.057720590.7722773.52.36.408358.69.20.0474394
PeakCounter: 14
DISPLAY GEL LANE LETTER: Lane d
DIGITAL REPORT GEL LANE: 4
LANE TYPE: pI Markers
ACTUAL GEL LANE: 4
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
14.55445.50.089461250.7127396.45.14.5543.44.60.0872575
25.214217.70.17868841.23703118.95.2141.640.176324
35.8524230.20.18276541.3947412.5105.85242.44.40.180488
46.5538247.60.18291351.6398414.611.86.55381.45.30.173652
56.8541151.20.03030650.2662252.41.96.85410.55.30.0282569
67.3547659.40.089219240.6868076.14.97.35475.64.30.0899088
78.1559874.60.11953761.3512312.19.78.15597.56.40.118406
88.4566582.90.1302461.3735712.39.98.45664.860.129694
98.65714890.098482540.7113836.45.18.65713.94.20.0966469
109.3770960.19369651.826616.313.19.3769.45.30.192942
PeakCounter: 10
DISPLAY GEL LANE LETTER: Lane e
DIGITAL REPORT GEL LANE: 5
LANE TYPE: Co-Migrated
ACTUAL GEL LANE: 5
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
14.466313.90.070945410004.4661810
24.606516.40.20232217.263328.822.94.60655.320.90.196416
35.12312515.60.006942520.02476990.10.15.123124.12.30.0060831
45.2136170.058113730.3219441.315.2134.93.20.0568434
55.27114818.50.44197732.6506210.58.45.271148.43.40.443824
65.40117021.20.25550341.63686.55.25.401169.93.70.249698
75.70822227.70.34091942.51776107.95.708222.24.40.324461
85.79723729.60.12139791.818897.25.75.797236.590.114305
95.8524630.70.066985730.182210.70.65.85246.73.30.0313806
105.949265330.020917230.1168420.50.45.949264.73.40.0192447
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
116.01727834.70.067700780.8877343.52.86.017280.28.10.0621261
126.0929236.40.21063120.8294453.32.66.09291.82.40.197449
136.17830938.50.13799440.91643.62.96.178308.33.60.144957
146.26232540.50.093898760.966093.836.262325.560.0907449
156.41335444.10.0485644120.9933493.93.16.413360.411.80.0474752
166.8541051.10.019835460.1834820.70.66.85409.55.80.0179837
177.3547559.20.10266161.030944.13.37.35475.25.80.100907
187.44549061.10.026761440.1911760.80.67.4454904.10.0262109
198.1560174.90.079457670.8862183.52.88.15597.37.10.0704449
208.45666830.043128970.5391982.11.78.45665.57.30.041546
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
218.65714890.04026240.2887491.10.98.65713.94.20.0389909
229.376995.90.10711450.9626573.839.3768.75.20.104369
PeakCounter: 22
DISPLAY GEL LANE LETTER: Lane f
DIGITAL REPORT GEL LANE: 6
LANE TYPE: Specimen
ACTUAL GEL LANE: 6
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
14.463293.60.084168760.8646743.42.44.46328.16.10.0804737
24.637556.90.251586187.1551927.919.94.63755.717.80.22671
35.09712415.50.0259958243.0536411.98.55.09792.3240.0717862
45.16313416.70.027572140.1322760.50.45.163133.73.90.0191466
55.26515018.70.39536642.9510711.58.25.265149.54.10.402783
65.39617121.30.24282841.735966.84.85.3961714.10.241615
75.70122027.40.3983942.55712107.15.701219.93.80.375002
85.78823429.20.16069592.235148.76.25.788233.18.60.146673
95.92325832.20.038232490.4390491.71.25.923255.88.60.02872
106.01127534.30.053118670.7295462.826.011277.67.20.0572551
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
116.07428735.80.18929430.9727943.82.76.074287.23.10.17545
126.18330838.40.13176541.0332542.96.183306.64.50.129663
136.26632440.40.092954460.9382043.72.66.266325.45.90.0900949
146.42235444.10.0521435100.8305573.22.36.422356.59.60.0487096
PeakCounter: 14
DISPLAY GEL LANE LETTER: Lane g
DIGITAL REPORT GEL LANE: 7
LANE TYPE: pI Markers
ACTUAL GEL LANE: 7
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
14.55415.10.10397250.8315266.95.54.5541.64.70.0995384
25.214317.80.18062141.2435810.38.35.2142.83.90.178021
35.8524230.20.18831741.4176911.89.45.85242.14.30.187726
46.55377470.1700851.4809712.39.86.55376.75.10.164467
56.8540750.70.026245660.24632721.66.85406.55.60.0246819
67.3547158.70.092381940.6944685.84.67.35471.24.30.0917399
78.1559373.90.10620581.5058812.5108.15593.68.40.101529
88.45658820.12153971.5930713.210.68.45657.97.30.123622
98.6571188.70.1029940.7396456.14.98.657114.10.101025
109.3770960.24541552.3000519.115.39.3769.45.40.240551
PeakCounter: 10
Gel Banding Patterns Display in HTML using GIF stacking technique
(Uses Migration Position Normalized Data from above text peak reports)

Return to Lane Navigator    Go to Gel Schematic Key

a b c d e f g
MK CO SP MK CO SP MK
white spacer for gel schematic
pI 4.55 label for gel schematic
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pI 5.20 label for gel schematic
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pI 5.8 label for gel schematic
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pI 4.55 label for gel schematic
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pI 5.20 label for gel schematic
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pI 5.8 label for gel schematic
white spacer for gel schematic
pI 6.55 label for gel schematic
white spacer for gel schematic
pI 6.85 label for gel schematic
white spacer for gel schematic
pI 7.35 label for gel schematic
white spacer for gel schematic
pI 8.15 label for gel schematic
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pI 8.45 label for gel schematic
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pI 8.65 label for gel schematic
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pI 9.30 label for gel schematic
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Key to Gel Schematic: MK=pI Marker Lanes, pI bands are in red
SP=Specimen Lanes, Specimen bands are in blue
CO=Co-migrated Lanes of pI Markers and Specimen (pI bands are in red, Specimen bands are in blue)
Note:  In co-migrated lanes, some pI Markers and Specimen bands may overlap in experiment.  Red pI
band is reported when overlapped peak position is equal to nominal pI Marker position.  Blue Specimen
band is reported when overlapped peak position deviates slightly from nominal pI Marker position.
Weak (<2% rel. intensity), Medium (2-6% rel. intensity), and Strong (>6% rel. intensity) band intensities indicated by gel schematic band thickness.
Return to Top of Gel Schematic

PeakCount: 103
HTML Forms TextArea Normalized Peak-Position Peak-Area for Copy-Paste events
DISPLAY GEL LANE LETTER: Lane a
DIGITAL REPORT GEL LANE: 1
LANE TYPE: pI Markers
ACTUAL GEL LANE: 1
PeakCount: 10 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane b
DIGITAL REPORT GEL LANE: 2
LANE TYPE: Co-Migrated
ACTUAL GEL LANE: 2
PeakCount: 23 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane c
DIGITAL REPORT GEL LANE: 3
LANE TYPE: Specimen
ACTUAL GEL LANE: 3
PeakCount: 14 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane d
DIGITAL REPORT GEL LANE: 4
LANE TYPE: pI Markers
ACTUAL GEL LANE: 4
PeakCount: 10 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane e
DIGITAL REPORT GEL LANE: 5
LANE TYPE: Co-Migrated
ACTUAL GEL LANE: 5
PeakCount: 22 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane f
DIGITAL REPORT GEL LANE: 6
LANE TYPE: Specimen
ACTUAL GEL LANE: 6
PeakCount: 14 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane g
DIGITAL REPORT GEL LANE: 7
LANE TYPE: pI Markers
ACTUAL GEL LANE: 7
PeakCount: 10 Return to Lane Navigator



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EXPERIMENTAL CONDITIONS: Gels were scanned at 600 d.p.i. in Adobe Photoshop 3.02 using a Sharp JX-325 Scanner with Film Scanner Attachment. Gels were analyzed for Densitometry, Intregration, and Migration Position Normalization in EXCEL 5.0 Format. *.xls files were imported into Paradox 7.0 to save as *.db files.

 RETURN TO TOP THIS DOCUMENT
Delphi 4.0 Generation of this Isoelectric Focusing (IEF) RFE PAGE 5 Tools in HTML
This HTML is automatically generated from a series of Paradox 7.0 database filesof IEF peak reports is controlled with a main RFEIEF Paradox 7.0 database withDelphi 3.0 front end (see Delphi 2.0 form) and back end for facile addition and modification of the Content of these RFE PAGE 5 HTML tools.
Contact Brad Tenge at btenge@ora.fda.gov for details.


RFE Contacts
A summary list of RFE contact personnel is available at http://www.cfsan.fda.gov/~frf/rfecon.html.

For isoelectric focusing laboratory experiments for fish species identification, you may contact

For isoelectric focusing gel analysis and pattern recognition applications, you may contact

For CFSAN web consultation and posting, you may contact


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Last updated on 2003-FEB-27 by bjt/frf/nln