LOCUS XM_424749 4379 bp mRNA linear VRT 16-NOV-2006
DEFINITION PREDICTED: Gallus gallus similar to ADAM metallopeptidase with
thrombospondin type 1 motif, 6 preproprotein (LOC427160), mRNA.
ACCESSION XM_424749
VERSION XM_424749.2 GI:118103828
KEYWORDS .
SOURCE Gallus gallus (red jungle fowl)
ORGANISM Gallus gallus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria;
Aves; Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from an annotated genomic sequence
(NW_001488830) using gene prediction method: GNOMON, supported by
mRNA and EST evidence.
Also see:
Documentation of NCBI's Annotation Process
On Nov 16, 2006 this sequence version replaced gi:50761524.
FEATURES Location/Qualifiers
source 1..4379
/organism="Gallus gallus"
/mol_type="mRNA"
/strain="inbred line UCD001"
/isolate="#256"
/db_xref="taxon:9031"
/chromosome="Z"
/sex="female"
/common="red jungle fowl"
/note="inbred line derived from a wild population of red
jungle fowl in Malaysia in the late 1930s, with the
possible introgression of a limited amount of White
Leghorn genome during its captive breeding history"
gene 1..4379
/gene="LOC427160"
/note="Derived by automated computational analysis using
gene prediction method: GNOMON. Supporting evidence
includes similarity to: 1 mRNA, 14 ESTs, 2 Proteins"
/db_xref="GeneID:427160"
CDS 472..3828
/gene="LOC427160"
/codon_start=1
/product="similar to ADAM metallopeptidase with
thrombospondin type 1 motif, 6 preproprotein"
/protein_id="XP_424749.2"
/db_xref="GI:118103829"
/db_xref="GeneID:427160"
/translation="MEIFWKTWTWILSLVMVSSEFHSDSRLSYSSQEEFLSYLEHYQL
TIPIRVDQNGAFLSFTVKNAKPSRRRRSTDPYDQELSASKLFFKLSAYGKHFHLNLTL
NTDLVSRHFTVEYWGKDGPQWKHDFLDHCHYTGYLQDQHTTTKVAVSNCNGLHGVIAT
EDEEYFIEPLKNVTANSSNFTYENGHPHVIYKKSTMRQHLLYDHSRCGVSDLTRSSKP
WWMSDGSAFPTSLPVNDTLSSHSRQKRSVSLERFVETLVVADKMMVGYHGRKDIEHYI
LSVMNIVAKLYRDSSLGNVVNIIVTRLIVLTEDQPNLEINHHADKSLDSFCKWQKSIL
SHQSDGNTIPENGIAHHDNAVLITRYDICTYKNKPCGTLGLASVAGMCEPERSCSINE
DIGLGSAFTIAHEIGHNFGMNHDGIGNSCGTKGHEAAKLMAAHITANTNPFSWSACSR
DYITSFLDSGRGTCLDNEPPKRDFLYPAVAPGQVYDADEQCRFQYGATSRQCKYGEVC
RELWCLSKSNRCVTNSIPAAEGTLCQTGSIEKGWCYQGECVPFGTWPQSIDGDWGPWS
IWGECSRTCGGGVSSSIRHCDSPAPSGGGKYCLGERKRDRSCNTDPCPAGARDFREKQ
CADFDNMPFRGKYYNWKPYTGGGVKPCALNCLAEGYNFYTERAPAVIDGTQCNADSLD
ICINGECKHVGCDNILGSDAKEDRCRVCGGDGSTCEAIEGFFNDSLPRGGYMEVIQIP
RGSVHIEIREVAVSKNYIALKSEEDDYYINGAWTIDWPRKFDVAGTAFHYKRPTDEPE
SLEALGPTSENLIVMILLQEQNLGIRYKFNVPISRTGSGDNEVGFAWNHLPWSECSAT
CAGGVQKQEVVCKRLDDNSVVQNNYCDPDSKPPENQRACNTEPCPPEWFIGDWSECSK
TCDGGVRSRTVLCIRKIGPSEEETLDSTNCLTHRPIEKEPCNNQSCPPQWVALDWSEC
TPKCGPGFKHRIVLCKSSDLLKTFPAAQCQEESKPPVRIRCSLGRCPPPRWVTGDWGQ
CSAQCGLGQQMRTVQCLSYTGQASSECSETHRPPSMQQCESKCDSTPISNTEECKDVN
KVAYCPLVLKFKFCSRAYFRQMCCKTCQGH"
ORIGIN
1 ctgatggcat cctccctgct gccccgccgg tccgtttctt aagagcccct tttggggagg
61 cgacagaacg tgattctgtg ggcgcagata ccccgatggt ggcttgctca gaggggaaaa
121 gcagagaggg aagcgggatc cgtcctgtgc aatatctatt gtttgaaact tactttgtat
181 cagaaagtga agatgagcac ggaaaagaaa tggagcaagt tcagtagcta tccactctaa
241 catcttaatg atatcttaag gaatcttaca atgcttattt tgaattgaga aaatgactgc
301 agatatagaa gaaagttgtt ggaaaagagt acctgtcaaa aagtggaaca tccagtagta
361 taaaataagt atacttgtta tggtgcaatt ctggagtgga gttaacccta tagcacacag
421 gtagccctcc aaggagagag aggaaaaaaa agctttctgt ttttctaaat tatggaaatt
481 ttttggaaga cgtggacatg gattctgagc ctagtcatgg tttcatcgga atttcacagt
541 gacagcaggc tttcatacag ttctcaagag gaattcctgt cttaccttga acactaccaa
601 ctaacaatcc caataagggt tgatcaaaat ggagccttcc tcagctttac tgtgaaaaat
661 gctaaaccct caagaaggag aaggagcaca gacccttatg accaagaact gtcagcatct
721 aaattatttt ttaaactctc tgcctatggc aagcactttc atttaaacct gactctcaac
781 acagatttgg tgtctagaca ttttacagtg gaatactggg ggaaagatgg tcctcagtgg
841 aagcatgatt ttttagacca ctgtcattac acaggatatt tgcaagacca acacactaca
901 actaaagtgg ctgtaagcaa ctgcaatggt ctgcatggag ttattgctac agaagatgaa
961 gagtatttta tcgagccttt aaagaatgta acagctaatt caagtaactt cacttatgag
1021 aatggtcatc cccatgtcat atacaaaaag tctaccatgc gccaacacct tctatacgat
1081 catagtcgct gtggagtctc agacctcaca agaagcagta aaccttggtg gatgagtgat
1141 ggatctgctt ttccaacttc gcttcctgtc aatgacacat taagtagtca tagtcgacag
1201 aagagatcag taagccttga gcggtttgtg gagacgctgg tagtagcaga caaaatgatg
1261 gtgggatatc atggtcgcaa agacattgag cactacattt tgagtgtaat gaatattgtt
1321 gccaaacttt atcgtgattc cagtctagga aacgtagtga atataatagt gacacgttta
1381 attgtcctca ctgaagatca gccaaacttg gagataaacc accatgcaga caagtccctc
1441 gatagcttct gtaagtggca gaaatccatt ctctcccacc aaagtgatgg aaacaccatt
1501 ccagaaaatg ggattgccca ccatgataat gcggttctta ttactagata tgatatctgc
1561 acttataaga acaaaccatg tggaactctg ggcttggcct ctgtggctgg aatgtgtgag
1621 cctgaaagga gctgcagcat taatgaagac attggcctag gttcagcttt taccattgca
1681 catgagattg gtcacaattt tggcatgaac catgatggaa taggaaattc ctgtgggacc
1741 aaaggtcatg aagcagcaaa actaatggca gctcatatta cagcaaacac caatcctttc
1801 tcttggtcag cctgcagtcg ggattatatc accagttttt tagattcggg ccgtggtact
1861 tgccttgata atgagcctcc caagcgtgac tttctttatc cagctgtggc cccaggtcag
1921 gtgtatgatg ctgatgaaca atgtcgcttc cagtatggag caacatcccg ccagtgtaaa
1981 tatggggaag tgtgtagaga gctctggtgt ctcagcaaaa gtaaccgctg tgttaccaat
2041 agtattccag cagctgaagg tactctttgc caaacaggaa gcattgaaaa ggggtggtgc
2101 tatcagggag agtgcgttcc ttttggcact tggccccaga gcatagatgg ggactggggt
2161 ccgtggtcaa tatggggaga gtgcagcagg acctgcggtg gaggagtctc ctcatcaata
2221 agacactgtg acagtccagc gccttcaggt ggaggcaaat attgtcttgg agaaaggaag
2281 agggatcgct cctgcaatac cgatccatgt cctgctgggg cccgtgactt tcgagaaaaa
2341 caatgtgcag attttgacaa tatgcctttc cgtggaaagt attacaactg gaaaccctac
2401 actggaggtg gggttaaacc atgtgcatta aactgcttgg ctgaaggtta taatttttac
2461 actgaacgtg ctcctgcagt aatagatggg actcagtgca atgctgactc actggatatc
2521 tgtatcaatg gagaatgcaa gcatgtaggt tgtgataata ttttggggtc tgatgctaag
2581 gaagatagat gtcgtgtttg tggaggagat gggagtacat gtgaagccat tgaaggtttc
2641 ttcaatgatt cattgcccag aggaggctac atggaagtga ttcaaattcc aagaggttca
2701 gtgcacattg aaataagaga agtggcagtg tccaagaact acattgctct aaaatctgaa
2761 gaggatgact actatattaa tggtgcctgg actattgact ggccaagaaa gtttgatgtt
2821 gctggaacag ctttccatta caagaggcca acagatgaac cagaatctct ggaagcgcta
2881 ggccctactt cggaaaatct catagtcatg attctgctac aggaacaaaa tttgggtata
2941 aggtataaat tcaatgttcc catctctcgc actggcagtg gagacaatga agttggcttt
3001 gcctggaatc atctaccttg gtcagaatgt tctgccactt gtgctggagg tgtgcagaaa
3061 caagaggtgg tgtgtaaaag gttggatgac aactctgttg tacaaaacaa ttattgtgac
3121 cctgacagta agcctccaga aaaccaaaga gcctgcaaca ctgagccttg cccacctgaa
3181 tggtttatag gagattggtc agaatgcagt aagacctgtg atggaggagt gcgttcacga
3241 acagttctct gtatcagaaa gattggacct tctgaggaag agacactgga cagtaccaac
3301 tgtttaacac accggcctat tgagaaagag ccctgtaaca atcagtcctg tcccccgcag
3361 tgggtcgctt tggactggtc agaatgcaca ccaaaatgtg gccctggatt taagcatcga
3421 attgttctgt gcaaaagcag cgatctttta aaaacttttc cagctgctca gtgccaagag
3481 gagagcaaac ctccagtccg catccgctgt agtttaggtc gatgtcctcc tcctcgctgg
3541 gttactggag actggggaca gtgctctgca cagtgtggtc ttggacaaca gatgcgaaca
3601 gtacagtgcc tctcatatac tggacaggca tccagtgagt gttcggaaac acatagacct
3661 ccatcaatgc aacagtgtga aagtaaatgt gacagtactc ccatttccaa cacagaagag
3721 tgcaaagatg tgaacaaagt ggcatattgc ccactggtgc tgaagttcaa gttctgcagt
3781 cgtgcatact tcagacagat gtgctgcaag acctgccaag gacactgacc cacagaaagc
3841 atgagaatgt gccttgttat tatcattgtg gaagagtgtc tattgaggag agccacacag
3901 cggaataaga ttgacgtcct tggaaatgca ttaccctgtg gaaaacgtaa ccactggtca
3961 gccccagctg acaggatttc aatattattt taacttctgt gaagtgggat ttattcatcc
4021 aaagtgctgg acacagtata aggagggcat gccaaattgg aaagatccac ataacacata
4081 tagagtagct tactgtggaa catttgtgtt cttttgactc aatccaatag tctgtttacc
4141 tccttggacc attaaaataa tttttattat ggacttagca atgacactga atccatttgt
4201 atttaaaact gtttaaaatg tagctgttat gacttggtct actatggaag taaagaagaa
4261 tcaaaaaaat gttaagtcat agcttaaaaa tgaaaactat tttatctcgt gacacagcac
4321 cacaacttaa attatagaat gagtttggaa atgttattta aggagcacaa atttaaaaa
//