MT0153
6 hits
317 letters
ath 
170 At5g42760 (370)
dme 
89 _ 7298251 (337) KOG2918
hsa 
88 _ Hs7662174 (686) KOG2918
spo 
65 _ SPBC342.04 (291) KOG3037
hsa 65 _ Hs4507517 (1736) KOG3580
cel 
65 _ CE00643 (333) KOG2918
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MT0153
(317 letters)
Database: kyva
112,920 sequences; 47,500,486 total letters
Score E
Sequences producing significant alignments: (bits) Value
At5g42760 70 6e-12
7298251 39 0.014
Hs7662174 39 0.019
SPBC342.04 30 8.7
Hs4507517 30 8.7
CE00643 30 8.7
# >At5g42760
# Length = 370
#
# Score = 70.1 bits (170), Expect = 6e-12
# Identities = 52/145 (35%), Positives = 76/145 (51%), Gaps = 10/145 (6%)
#
# Query: 94 AVRTHFFDEYFGAAVDA---GVRQVVILAAGLDARAYRLNWPAGTVVYEIDQPSVLEYKA 150
# AVRT +FD AA+++ QVV+L AG+DAR+YRLN + V+E+D VLE KA
# Sbjct: 132 AVRTLWFDTRIQAALESFHGDAAQVVLLGAGMDARSYRLNCLNKSDVFEVDFQDVLETKA 191
#
# Query: 151 GILQSHGAVPTARRHA------VAVDLRD-DWPAALIAAGFDGTQPTAWLAEGLLPYLPG 203
# ++Q+ R VA+D+RD DW L +GF T W+ EG+L YL
# Sbjct: 192 SLVQAAVNSRDELRMTAKSLVRVAIDIRDNDWFEQLKKSGFLPEINTVWVLEGILYYLSH 251
#
# Query: 204 DAADRLFDMVTALSAPGSQVAVEAF 228
# A ++ +++ S V + F
# Sbjct: 252 TEAMQVLNLIAEKCGLTSTVLLADF 276
#
#
# >7298251
# Length = 337
#
# Score = 38.9 bits (89), Expect = 0.014
# Identities = 50/209 (23%), Positives = 79/209 (36%), Gaps = 30/209 (14%)
#
# Query: 110 AGVRQVVILAAGLDARAYRLNWPAGTV--VYEIDQPSVLEYKAGILQSHGAV-------- 159
# +G Q++ L G D +RL A V E+D P+V K ++ + A+
# Sbjct: 85 SGNCQIINLGCGFDTLYFRLRDTAHQVKNFIELDFPTVTARKCYTIKRNKALLARIHDED 144
#
# Query: 160 ------PTARR----HAVAVDLR--DDWPAALIAAGFDGTQPTAWLAEGLLPYLPGDAAD 207
# PT H + VDLR D+ + L A D + PT +LAE +L Y+
# Sbjct: 145 GEVRLSPTDLHGPSYHLMGVDLRNLDEVDSKLQQAEVDYSLPTIFLAECVLVYIEAQNCR 204
#
# Query: 208 RLFDMVTALSAPGSQVAVEAFTMNTKGNTQRWNRMRER--------LGLDIDVQALTYHE 259
# L + V E MN + N +R R L +D Q + +
# Sbjct: 205 NLLKWIAQKFQAAVFVNYEQVNMNDRFGDVMLNNLRGRGCSLAGVESCLSLDTQRNRFKD 264
#
# Query: 260 PDRSDAAQWLATHGWQVHSVSNREEMARL 288
# + A W ++ S + R+ + RL
# Sbjct: 265 SGWTGARAWDMVQVYESISAAERQRIERL 293
#
#
# >Hs7662174
# Length = 686
#
# Score = 38.5 bits (88), Expect = 0.019
# Identities = 42/133 (31%), Positives = 54/133 (40%), Gaps = 23/133 (17%)
#
# Query: 100 FDEYFGAAVDAGVRQVVILAAGLDARAYRLNWP---AGTVVYEIDQPSVLEYKA------ 150
# F E GA A Q++ L AG D+ +RL A V+E+D P V KA
# Sbjct: 70 FLEQIGAPQAALRAQILSLGAGFDSLYFRLKTAGRLARAAVWEVDFPDVARRKAERIGET 129
#
# Query: 151 ------------GILQSHGAVPTARRHAVAVDLRD--DWPAALIAAGFDGTQPTAWLAEG 196
# G S +A + +DLR AL AAG D PT LAE
# Sbjct: 130 PELCALTGPFERGEPASALCFESADYCILGLDLRQLQRVEEALGAAGLDAASPTLLLAEA 189
#
# Query: 197 LLPYLPGDAADRL 209
# +L YL ++A L
# Sbjct: 190 VLTYLEPESAAAL 202
#
#
# >SPBC342.04
# Length = 291
#
# Score = 29.6 bits (65), Expect = 8.7
# Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
#
# Query: 197 LLPYLPGDAADRLFDMVTALSAPGSQVAVEAFT--MNTKGNTQRWNRMRERLGLDIDVQA 254
# L+PY+P D + L ++ +S+P A+ +F+ +N+ G + LGL +D A
# Sbjct: 211 LMPYMPPDTPNNLEGVLAIVSSPQYAQALRSFSQALNSPGGV----NIISALGLSLDESA 266
#
# Query: 255 LTYHEPDRSDAAQWL 269
# P+ A Q+L
# Sbjct: 267 ----NPNEGGALQFL 277
#
#
# >Hs4507517
# Length = 1736
#
# Score = 29.6 bits (65), Expect = 8.7
# Identities = 17/55 (30%), Positives = 25/55 (44%)
#
# Query: 171 LRDDWPAALIAAGFDGTQPTAWLAEGLLPYLPGDAADRLFDMVTALSAPGSQVAV 225
# + D W AL A W++EG D D D ++ LSAPGS+ ++
# Sbjct: 766 MNDGWYGALKEAVQQQQNQLVWVSEGKADGATSDDLDLHDDRLSYLSAPGSEYSM 820
#
#
# >CE00643
# Length = 333
#
# Score = 29.6 bits (65), Expect = 8.7
# Identities = 39/173 (22%), Positives = 63/173 (35%), Gaps = 28/173 (16%)
#
# Query: 83 RRVHRVACDYQAVRTHFFDEYFGAAVDA--GVRQVVILAAGLDARAYRLNWPAGTVV--Y 138
# RR ++ Y A RT ++Y ++ G QVV L G D +RL +V
# Sbjct: 70 RRFPEISMGYWA-RTAAIEKYVRDFLNEFDGNAQVVSLGCGFDTLFWRLVSSGAKLVKYV 128
#
# Query: 139 EIDQPSVLEYKA---------------------GILQSHGAVPTARRHAVAVDLR--DDW 175
# E+D SV K ++ H + H + DLR ++
# Sbjct: 129 EVDFSSVTSKKIRHILKPIGPNSVDLKKSFESDAVVSHHADLHAGNYHLIGADLRQANEL 188
#
# Query: 176 PAALIAAGFDGTQPTAWLAEGLLPYLPGDAADRLFDMVTALSAPGSQVAVEAF 228
# L PT ++AE +L Y+ D++ L + + + V E F
# Sbjct: 189 DQKLATCQLSHDIPTIFIAECVLVYMSADSSTALLKQIVSQFKQPAFVNYEQF 241
#
#
Database: kyva
Posted date: Nov 11, 2002 5:09 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Lambda K H
0.319 0.133 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,893,742
Number of Sequences: 112920
Number of extensions: 876280
Number of successful extensions: 1465
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1460
Number of HSP's gapped (non-prelim): 6
length of query: 317
length of database: 47,500,486
effective HSP length: 109
effective length of query: 208
effective length of database: 35,192,206
effective search space: 7319978848
effective search space used: 7319978848
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
S2: 65 (29.6 bits)