BLASTP 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= SPy_1220 hypothetical protein
(283 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,515,104 sequences; 2,222,278,849 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_269358.1| hypothetical protein SPy_1220 [Streptococc... 583 e-165
ref|YP_598657.1| Lipoate-protein ligase A [Streptococcus py... 578 e-163
ref|NP_607289.1| hypothetical protein spyM18_1172 [Streptoc... 578 e-163
ref|YP_282297.1| lipoate-protein ligase A [Streptococcus py... 572 e-161
ref|NP_802322.1| hypothetical protein SPs1060 [Streptococcu... 555 e-156
ref|NP_664664.1| hypothetical protein SpyM3_0860 [Streptoco... 504 e-141
ref|ZP_00785414.1| lipoate-protein ligase A [Streptococcus ... 320 9e-86
ref|NP_688071.1| hypothetical protein SAG1062 [Streptococcu... 319 1e-85
ref|ZP_00789486.1| lipoate-protein ligase A [Streptococcus ... 318 3e-85
ref|NP_735542.1| hypothetical protein gbs1096 [Streptococcu... 317 5e-85
ref|YP_329772.1| hypothetical protein SAK_1151 [Streptococc... 314 4e-84
pdb|2P0L|A Chain A, Crystal Structure Of A Lipoate-Protein ... 305 3e-81
ref|ZP_00875413.1| conserved hypothetical protein [Streptoc... 216 1e-54
ref|YP_001197671.1| Lipoate-protein ligase A [Streptococcus... 213 1e-53
ref|ZP_02184334.1| lipoate-protein ligase A family protein,... 202 2e-50
ref|NP_814874.1| lipoate-protein ligase A family protein, p... 194 4e-48
ref|YP_396246.1| hypothetical protein LSA1633 [Lactobacillu... 194 7e-48
ref|YP_001696690.1| Hypothetical ywfL protein [Lysinibacill... 194 7e-48
ref|ZP_01697392.1| biotin/lipoate A/B protein ligase [Bacil... 193 1e-47
ref|NP_693943.1| hypothetical protein OB3021 [Oceanobacillu... 189 2e-46
ref|YP_001812741.1| biotin/lipoate A/B protein ligase [Exig... 189 3e-46
ref|NP_244689.1| hypothetical protein BH3822 [Bacillus halo... 186 2e-45
ref|ZP_01173944.1| Lipoate-protein ligase A [Bacillus sp. N... 184 6e-45
ref|ZP_02915028.1| biotin/lipoate A/B protein ligase [Geoba... 184 8e-45
ref|NP_472040.1| hypothetical protein lin2711 [Listeria inn... 182 2e-44
ref|YP_149267.1| hypothetical protein GK3414 [Geobacillus k... 182 2e-44
ref|ZP_02688753.1| hypothetical protein LmonFSL_16100 [List... 182 3e-44
ref|ZP_01274998.1| Biotin/lipoate A/B protein ligase [Lacto... 179 2e-43
ref|ZP_02990278.1| biotin/lipoate A/B protein ligase [Exigu... 179 2e-43
ref|YP_001127442.1| Lipoate-protein ligase A [Geobacillus t... 179 2e-43
pdb|2P5I|A Chain A, Crystal Structure Of Protein Bh3822 Fro... 179 3e-43
ref|ZP_01861253.1| Lipoate-protein ligase A [Bacillus sp. S... 178 3e-43
ref|YP_001270832.1| biotin/lipoate A/B protein ligase [Lact... 177 6e-43
ref|NP_466089.1| hypothetical protein lmo2566 [Listeria mon... 177 8e-43
ref|YP_302213.1| putative lipoate-protein ligase A [Staphyl... 177 8e-43
ref|ZP_00234678.1| biotin/lipoate A/B protein ligase family... 177 9e-43
ref|ZP_00231333.1| biotin/lipoate A/B protein ligase family... 177 1e-42
ref|ZP_02543291.1| lipoate-protein ligase A [Bacillus cereu... 176 2e-42
ref|YP_850713.1| biotin/lipoate A/B protein ligase family p... 176 2e-42
ref|YP_015126.1| biotin/lipoate A/B protein ligase family p... 176 2e-42
ref|NP_371113.1| putative lipoate-protein ligase A [Staphyl... 175 4e-42
ref|YP_040043.1| lipoate-protein ligase A protein [Staphylo... 174 5e-42
ref|YP_794672.1| Lipoate-protein ligase A [Lactobacillus br... 173 1e-41
ref|ZP_02263644.1| lipoate-protein ligase A [Bacillus cereu... 173 1e-41
ref|NP_645361.1| hypothetical protein MW0544 [Staphylococcu... 173 1e-41
ref|NP_847785.1| lipoate-protein ligase A, putative [Bacill... 173 1e-41
ref|YP_042676.1| lipoate-protein ligase A protein [Staphylo... 173 1e-41
ref|ZP_02169349.1| PAS/PAC sensor signal transduction histi... 173 1e-41
ref|YP_086653.1| lipoate-protein ligase A [Bacillus cereus ... 172 2e-41
ref|ZP_02524827.1| Lipoate-protein ligase A [Bacillus cereu... 172 2e-41
ref|ZP_02580693.1| Lipoate-protein ligase A [Bacillus cereu... 172 2e-41
ref|ZP_02290512.1| hypothetical protein LmonocyFSL_19404 [L... 172 2e-41
ref|NP_981807.1| lipoate-protein ligase A, putative [Bacill... 172 2e-41
ref|YP_897568.1| lipoate-protein ligase A [Bacillus thuring... 172 2e-41
ref|ZP_00738672.1| Lipoate-protein ligase A [Bacillus thuri... 172 2e-41
ref|YP_001377086.1| biotin/lipoate A/B protein ligase [Baci... 172 3e-41
ref|ZP_02256066.1| lipoate-protein ligase A [Bacillus cereu... 171 4e-41
ref|YP_001647952.1| biotin/lipoate A/B protein ligase [Baci... 171 5e-41
ref|YP_254318.1| hypothetical protein SH2403 [Staphylococcu... 171 6e-41
ref|NP_835047.1| Lipoate-protein ligase A [Bacillus cereus ... 170 9e-41
ref|ZP_00241029.1| lipoate-protein ligase A family protein ... 170 1e-40
ref|NP_763915.1| hypothetical protein SE0360 [Staphylococcu... 168 4e-40
ref|YP_001423042.1| YwfL [Bacillus amyloliquefaciens FZB42]... 167 6e-40
ref|YP_187833.1| lipoate-protein ligase A family protein [S... 167 1e-39
ref|YP_177401.1| lipoate-protein ligase [Bacillus clausii K... 166 1e-39
ref|ZP_02321256.1| biotin/lipoate A/B protein ligase family... 162 2e-38
ref|NP_784264.1| hypothetical protein lp_0477 [Lactobacillu... 162 4e-38
ref|NP_391644.1| hypothetical protein BSU37640 [Bacillus su... 159 2e-37
ref|YP_807740.1| Lipoate-protein ligase A [Lactobacillus ca... 159 2e-37
ref|YP_081064.1| conserved protein YwfL [Bacillus lichenifo... 158 4e-37
ref|YP_001488612.1| lipoate--protein ligase [Bacillus pumil... 147 1e-33
ref|ZP_02327322.1| hypothetical protein Plarl_06700 [Paenib... 125 2e-27
ref|ZP_01724803.1| lipoate-protein ligase A [Bacillus sp. B... 124 7e-27
ref|ZP_02847882.1| Lipoate-protein ligase A-like protein [P... 110 2e-22
dbj|BAB88975.1| hypothetical protein [Bacillus cereus] 108 3e-22
ref|ZP_02612050.1| lipoate-protein ligase A [Bacillus anthr... 97 1e-18
ref|ZP_01165794.1| hypothetical protein MED92_10289 [Oceano... 92 4e-17
ref|YP_855813.1| biotin/lipoate A/B protein ligase family [... 72 4e-11
ref|YP_001141113.1| biotin/lipoate A/B protein ligase famil... 68 9e-10
ref|NP_936527.1| lipoate-protein ligase A [Vibrio vulnificu... 66 3e-09
ref|YP_269748.1| hypothetical protein CPS_3049 [Colwellia p... 65 7e-09
ref|ZP_02195173.1| hypothetical protein AND4_10414 [Vibrio ... 63 2e-08
ref|NP_763527.1| Lipoate-protein ligase A [Vibrio vulnificu... 63 2e-08
ref|YP_272973.1| hypothetical protein PSPPH_0675 [Pseudomon... 62 6e-08
ref|ZP_02015020.1| conserved hypothetical protein [Halorubr... 61 8e-08
ref|YP_237646.1| hypothetical protein Psyr_4578 [Pseudomona... 60 2e-07
ref|NP_790442.1| conserved hypothetical protein [Pseudomona... 60 2e-07
ref|ZP_02840113.1| conserved hypothetical protein [Arthroba... 59 3e-07
ref|ZP_01811703.1| hypothetical protein VSWAT3_13622 [Vibri... 59 3e-07
ref|YP_262679.1| hypothetical protein PFL_5620 [Pseudomonas... 58 7e-07
ref|ZP_01897380.1| hypothetical protein PE36_21004 [Moritel... 58 9e-07
ref|ZP_01259349.1| hypothetical protein V12G01_02345 [Vibri... 57 1e-06
ref|NP_799905.1| hypothetical protein VPA0395 [Vibrio parah... 57 1e-06
ref|ZP_01477153.1| hypothetical protein VEx2w_02000357 [Vib... 57 2e-06
ref|ZP_01063047.1| hypothetical protein MED222_09898 [Vibri... 56 3e-06
ref|YP_001448596.1| hypothetical protein VIBHAR_06478 [Vibr... 55 4e-06
gb|AAC37133.1| unknown [Rhodococcus erythropolis] 55 5e-06
ref|ZP_00379800.1| COG0095: Lipoate-protein ligase A [Brevi... 55 5e-06
ref|YP_001761303.1| conserved hypothetical protein [Shewane... 55 6e-06
ref|ZP_02943990.1| lipoate-protein ligase A [Micrococcus lu... 55 7e-06
ref|YP_001350189.1| hypothetical protein PSPA7_4853 [Pseudo... 54 9e-06
ref|ZP_00989556.1| hypothetical protein V12B01_17646 [Vibri... 54 1e-05
ref|ZP_00965333.1| COG0095: Lipoate-protein ligase A [Pseud... 54 1e-05
ref|ZP_00971259.1| COG0095: Lipoate-protein ligase A [Pseud... 54 1e-05
ref|NP_252976.1| hypothetical protein PA4286 [Pseudomonas a... 54 1e-05
ref|YP_136772.1| hypothetical protein rrnAC2235 [Haloarcula... 54 1e-05
ref|YP_326509.1| homolog to lipoate-protein ligase [Natrono... 54 2e-05
ref|YP_001020796.1| lipoate-protein ligase A-like protein [... 52 4e-05
ref|YP_700806.1| possible lipoate-protein ligase A [Rhodoco... 52 5e-05
ref|YP_943083.1| hypothetical protein Ping_1694 [Psychromon... 52 7e-05
ref|ZP_00963296.1| hypothetical protein NAS141_15228 [Sulfi... 51 9e-05
ref|YP_001751625.1| conserved hypothetical protein [Pseudom... 50 2e-04
ref|YP_001855254.1| hypothetical protein KRH_14010 [Kocuria... 50 2e-04
ref|YP_001265810.1| Lipoate-protein ligase A-like protein [... 50 2e-04
ref|NP_742589.1| hypothetical protein PP_0423 [Pseudomonas ... 50 2e-04
ref|ZP_00956492.1| hypothetical protein EE36_10330 [Sulfito... 50 2e-04
ref|YP_643736.1| biotin/lipoate A/B protein ligase [Rubroba... 50 2e-04
ref|YP_001666700.1| conserved hypothetical protein [Pseudom... 50 3e-04
ref|YP_350840.1| hypothetical protein PflO1_5112 [Pseudomon... 48 6e-04
ref|NP_281113.1| hypothetical protein VNG2536C [Halobacteri... 48 8e-04
ref|YP_267024.1| hypothetical protein CPS_0257 [Colwellia p... 47 0.001
ref|YP_074390.1| lipoate-protein ligase [Symbiobacterium th... 47 0.002
ref|YP_642851.1| biotin/lipoate A/B protein ligase [Rubroba... 46 0.002
ref|YP_606221.1| hypothetical protein PSEEN0450 [Pseudomona... 45 0.008
ref|YP_831805.1| hypothetical protein Arth_2325 [Arthrobact... 44 0.009
ref|NP_972157.1| lipoyltransferase and lipoate-protein liga... 44 0.013
ref|NP_764772.1| hypothetical protein SE1217 [Staphylococcu... 44 0.017
ref|YP_588062.1| hypothetical protein Rmet_5934 [Ralstonia ... 44 0.018
ref|YP_299742.1| hypothetical protein Reut_B5553 [Ralstonia... 43 0.020
ref|YP_948057.1| hypothetical protein AAur_2320 [Arthrobact... 43 0.029
ref|NP_243678.1| lipoate protein ligase [Bacillus haloduran... 42 0.034
ref|NP_372057.1| similar to lipoate protein ligase [Staphyl... 42 0.034
ref|YP_041006.1| lipoate-protein ligase A protein [Staphylo... 42 0.035
ref|ZP_02235269.1| hypothetical protein DORFOR_02155 [Dorea... 42 0.036
ref|NP_646302.1| hypothetical protein MW1485 [Staphylococcu... 42 0.037
ref|YP_494189.1| hypothetical protein SAUSA300_1494 [Staphy... 42 0.038
ref|YP_921337.1| putative lipoate-protein ligase A [Nocardi... 41 0.078
ref|YP_301312.1| putative lipoate protein ligase [Staphyloc... 41 0.091
ref|YP_728319.1| Lipoate-protein ligase A [Ralstonia eutrop... 41 0.097
ref|YP_818219.1| Lipoate-protein ligase A [Leuconostoc mese... 41 0.11
ref|YP_808102.1| Lipoate-protein ligase A [Lactococcus lact... 41 0.11
ref|YP_001031437.1| lipoate-protein ligase [Lactococcus lac... 41 0.12
ref|NP_110077.1| lipoate protein ligase [Mycoplasma pneumon... 40 0.13
ref|YP_809967.1| Lipoate-protein ligase A [Oenococcus oeni ... 40 0.14
ref|YP_001490395.1| biotin/lipoate A/B protein ligase famil... 40 0.21
ref|YP_001395160.1| LplA [Clostridium kluyveri DSM 555] >gi... 40 0.26
ref|ZP_02967627.1| biotin/lipoate A/B protein ligase [bacte... 40 0.26
ref|NP_266219.1| lipoate-protein ligase [Lactococcus lactis... 40 0.26
ref|YP_253298.1| hypothetical protein SH1383 [Staphylococcu... 39 0.28
ref|XP_001349882.1| lipoate-protein ligase a [Plasmodium fa... 39 0.37
ref|YP_079777.1| putative lipoate protein ligase YqhM [Baci... 39 0.41
ref|ZP_01544999.1| lipoate-protein ligase [Oenococcus oeni ... 38 0.64
ref|YP_517975.1| hypothetical protein DSY1742 [Desulfitobac... 38 0.68
ref|ZP_01368786.1| lipoyltransferase and lipoate-protein li... 38 0.69
ref|YP_001887572.1| lipoate-protein ligase A [Clostridium b... 38 0.71
ref|NP_111510.1| Lipoate-protein ligase A [Thermoplasma vol... 38 0.87
ref|YP_053278.1| lipoate-protein ligase [Mesoplasma florum ... 38 0.90
ref|YP_805237.1| Lipoate-protein ligase A [Pediococcus pent... 37 1.1
ref|YP_001487414.1| lipoate protein ligase A [Bacillus pumi... 37 1.1
ref|NP_390333.1| hypothetical protein BSU24530 [Bacillus su... 37 1.2
ref|YP_001727700.1| Lipoate-protein ligase A [Leuconostoc c... 37 1.3
ref|ZP_02328379.1| YqhM [Paenibacillus larvae subsp. larvae... 37 1.6
ref|YP_001626612.1| lipoate-protein ligase A [Renibacterium... 37 1.6
ref|NP_954816.1| helicase [Gordonia westfalica] >gi|4021738... 37 1.8
ref|ZP_00236482.1| flagellar basal-body rod protein flgF, p... 37 1.9
ref|NP_393990.1| lipoate protein ligase related protein [Th... 37 1.9
ref|ZP_00951239.1| Secreted protein containing N-terminal Z... 37 2.0
ref|YP_001822732.1| putative lipoate-protein ligase [Strept... 37 2.1
ref|YP_148273.1| lipoate protein ligase [Geobacillus kausto... 36 2.7
ref|YP_154692.1| Lipoate-protein ligase A [Idiomarina loihi... 36 2.7
ref|ZP_02045015.1| hypothetical protein ACTODO_01904 [Actin... 36 2.9
ref|ZP_02084010.1| hypothetical protein CLOBOL_01533 [Clost... 36 3.4
ref|ZP_01189755.1| Lipoyltransferase and lipoate-protein li... 35 4.6
ref|YP_001376126.1| biotin/lipoate A/B protein ligase [Baci... 35 4.6
ref|ZP_02911860.1| biotin/lipoate A/B protein ligase [Geoba... 35 4.8
ref|YP_001126448.1| Lipoate protein ligase [Geobacillus the... 35 5.1
emb|CAK98639.1| putative lipoate-protein ligase a [Spiropla... 35 6.9
ref|YP_001661887.1| lipoyltransferase and lipoate-protein l... 35 7.1
ref|YP_585533.1| type II and III secretion system protein [... 35 7.6
ref|ZP_00603939.1| Lipoyltransferase and lipoate-protein li... 35 8.1
>ref|NP_269358.1| hypothetical protein SPy_1220 [Streptococcus pyogenes M1 GAS]
ref|YP_280374.1| lipoate-protein ligase A [Streptococcus pyogenes MGAS6180]
ref|YP_001128423.1| hypothetical protein SpyM50864 [Streptococcus pyogenes str.
Manfredo]
gb|AAK34079.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gb|AAX72019.1| lipoate-protein ligase A [Streptococcus pyogenes MGAS6180]
emb|CAM30192.1| conserved hypothetical protein [Streptococcus pyogenes str.
Manfredo]
Length = 283
Score = 583 bits (1502), Expect = e-165, Method: Compositional matrix adjust.
Identities = 283/283 (100%), Positives = 283/283 (100%)
Query: 1 MKGRIVITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTR 60
MKGRIVITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTR
Sbjct: 1 MKGRIVITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTR 60
Query: 61 TVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESIS 120
TVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESIS
Sbjct: 61 TVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESIS 120
Query: 121 ISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVV 180
ISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVV
Sbjct: 121 ISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVV 180
Query: 181 SIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE 240
SIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE
Sbjct: 181 SIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE 240
Query: 241 RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK 283
RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK
Sbjct: 241 RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK 283
>ref|YP_598657.1| Lipoate-protein ligase A [Streptococcus pyogenes MGAS10270]
ref|YP_602577.1| Lipoate-protein ligase A [Streptococcus pyogenes MGAS10750]
gb|ABF34113.1| Lipoate-protein ligase A [Streptococcus pyogenes MGAS10270]
gb|ABF38033.1| Lipoate-protein ligase A [Streptococcus pyogenes MGAS10750]
Length = 283
Score = 578 bits (1491), Expect = e-163, Method: Compositional matrix adjust.
Identities = 281/283 (99%), Positives = 281/283 (99%)
Query: 1 MKGRIVITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTR 60
MKGRIVITIRDL SLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTR
Sbjct: 1 MKGRIVITIRDLTSLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTR 60
Query: 61 TVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESIS 120
TVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESIS
Sbjct: 61 TVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESIS 120
Query: 121 ISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVV 180
ISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVV
Sbjct: 121 ISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVV 180
Query: 181 SIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE 240
SIYLSVCGDQAARGQLIK FYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE
Sbjct: 181 SIYLSVCGDQAARGQLIKAFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE 240
Query: 241 RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK 283
RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK
Sbjct: 241 RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK 283
>ref|NP_607289.1| hypothetical protein spyM18_1172 [Streptococcus pyogenes MGAS8232]
ref|YP_060241.1| Lipoate-protein ligase A [Streptococcus pyogenes MGAS10394]
ref|ZP_00366403.1| COG0095: Lipoate-protein ligase A [Streptococcus pyogenes M49 591]
ref|YP_596768.1| lipoate-protein ligase A [Streptococcus pyogenes MGAS9429]
ref|YP_600589.1| Lipoate-protein ligase A [Streptococcus pyogenes MGAS2096]
gb|AAL97788.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gb|AAT87058.1| Lipoate-protein ligase A [Streptococcus pyogenes MGAS10394]
gb|ABF32224.1| lipoate-protein ligase A [Streptococcus pyogenes MGAS9429]
gb|ABF36045.1| Lipoate-protein ligase A [Streptococcus pyogenes MGAS2096]
Length = 283
Score = 578 bits (1489), Expect = e-163, Method: Compositional matrix adjust.
Identities = 281/283 (99%), Positives = 281/283 (99%)
Query: 1 MKGRIVITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTR 60
MKGRIVITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTR
Sbjct: 1 MKGRIVITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTR 60
Query: 61 TVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESIS 120
TVILGMLDRQLPYFELAK EIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESIS
Sbjct: 61 TVILGMLDRQLPYFELAKKEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESIS 120
Query: 121 ISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVV 180
ISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVV
Sbjct: 121 ISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVV 180
Query: 181 SIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE 240
SIYLSVCGDQAARGQLIK FYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE
Sbjct: 181 SIYLSVCGDQAARGQLIKAFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLE 240
Query: 241 RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK 283
RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK
Sbjct: 241 RLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK 283
>ref|YP_282297.1| lipoate-protein ligase A [Streptococcus pyogenes MGAS5005]
gb|AAZ51552.1| lipoate-protein ligase A [Streptococcus pyogenes MGAS5005]
Length = 278
Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust.
Identities = 277/278 (99%), Positives = 278/278 (100%)
Query: 6 VITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILG 65
+ITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILG
Sbjct: 1 MITIRDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILG 60
Query: 66 MLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAY 125
MLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAY
Sbjct: 61 MLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAY 120
Query: 126 LIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLS 185
LIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLS
Sbjct: 121 LIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLS 180
Query: 186 VCGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLT 245
VCGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLT
Sbjct: 181 VCGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLT 240
Query: 246 LRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK 283
LRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK
Sbjct: 241 LRQLGFSLTEKSPDQALLTNFDAVYERMQLEVVRKEGK 278
>ref|NP_802322.1| hypothetical protein SPs1060 [Streptococcus pyogenes SSI-1]
dbj|BAC64155.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 269
Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/269 (99%), Positives = 269/269 (100%)
Query: 15 LPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYF 74
+PIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYF
Sbjct: 1 MPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYF 60
Query: 75 ELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRE 134
ELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRE
Sbjct: 61 ELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRE 120
Query: 135 SFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARG 194
SFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARG
Sbjct: 121 SFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARG 180
Query: 195 QLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
QLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT
Sbjct: 181 QLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 240
Query: 255 EKSPDQALLTNFDAVYERMQLEVVRKEGK 283
EKSPDQALLTNFDAVYERMQLEVVRKEGK
Sbjct: 241 EKSPDQALLTNFDAVYERMQLEVVRKEGK 269
>ref|NP_664664.1| hypothetical protein SpyM3_0860 [Streptococcus pyogenes MGAS315]
gb|AAM79467.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
Length = 245
Score = 504 bits (1298), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/245 (99%), Positives = 245/245 (100%)
Query: 39 VFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAV 98
+FLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAV
Sbjct: 1 MFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAV 60
Query: 99 VADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFD 158
VADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFD
Sbjct: 61 VADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFD 120
Query: 159 LSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYPQID 218
LSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYPQID
Sbjct: 121 LSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYPQID 180
Query: 219 PECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVV 278
PECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVV
Sbjct: 181 PECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAVYERMQLEVV 240
Query: 279 RKEGK 283
RKEGK
Sbjct: 241 RKEGK 245
>ref|ZP_00785414.1| lipoate-protein ligase A [Streptococcus agalactiae COH1]
gb|EAO75865.1| lipoate-protein ligase A [Streptococcus agalactiae COH1]
Length = 278
Score = 320 bits (819), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 155/275 (56%), Positives = 200/275 (72%), Gaps = 8/275 (2%)
Query: 10 RDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDR 69
+DLA LP+ ++ D A PF+WTEVFL+ IN+ ++ILHIWPMT+TVILGMLDR
Sbjct: 4 QDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDR 63
Query: 70 QLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMV 129
+LP+ ELAK EI + GY PV RN GGLAVVAD+GILNFSLVIPD F +SIS+ YLIMV
Sbjct: 64 ELPHLELAKKEIISRGYEPVVRNFGGLAVVADEGILNFSLVIPDVFERKLSISDGYLIMV 123
Query: 130 DVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGD 189
D IR FSD+YQ IE+ E++ SYCPG FDLSI G+KFAG+AQRRIK GI VSIYLSVCGD
Sbjct: 124 DFIRSIFSDFYQPIEHFEVETSYCPGKFDLSINGKKFAGLAQRRIKNGIAVSIYLSVCGD 183
Query: 190 QAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQL 249
Q R Q+I DFY+ G + + YP +DPE MA LS+LL+ P TV +V++R+ ++L+Q+
Sbjct: 184 QKGRSQMISDFYKIGLGDTGSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLISLKQV 243
Query: 250 GFSLTEKSPDQALLTNFDAV--YERMQLEVVRKEG 282
GF+ D+ L+ D V ++R Q + + +G
Sbjct: 244 GFN------DRLLMIRPDLVAEFDRFQAKSMANKG 272
>ref|NP_688071.1| hypothetical protein SAG1062 [Streptococcus agalactiae 2603V/R]
gb|AAM99943.1|AE014240_14 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
Length = 282
Score = 319 bits (818), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/275 (56%), Positives = 199/275 (72%), Gaps = 8/275 (2%)
Query: 10 RDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDR 69
+DLA LP+ ++ D A PF+WTEVFL+ IN+ ++ILHIWPMT+TVILGMLDR
Sbjct: 8 QDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDR 67
Query: 70 QLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMV 129
+LP+ ELAK EI + GY PV RN GGLAVVAD+GILNFSLVIPD F +SIS+ YLIMV
Sbjct: 68 ELPHLELAKKEIISRGYEPVVRNFGGLAVVADEGILNFSLVIPDVFERKLSISDGYLIMV 127
Query: 130 DVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGD 189
D IR FSD+YQ IE+ E++ SYCPG FDLSI G+KFAG+AQRRIK GI VSIYLSVCGD
Sbjct: 128 DFIRSIFSDFYQPIEHFEVETSYCPGKFDLSINGKKFAGLAQRRIKNGIAVSIYLSVCGD 187
Query: 190 QAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQL 249
Q R Q+I DFY+ G + + YP +DPE MA LS+LL+ P TV +V++R+ ++L+Q+
Sbjct: 188 QKGRSQMISDFYKIGLGDTGSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLISLKQV 247
Query: 250 GFSLTEKSPDQALLTNFDAVYE--RMQLEVVRKEG 282
GF+ D+ L+ D V E R Q + + +G
Sbjct: 248 GFN------DRLLMIRPDLVAEFNRFQAKSMANKG 276
>ref|ZP_00789486.1| lipoate-protein ligase A [Streptococcus agalactiae 515]
gb|EAO71792.1| lipoate-protein ligase A [Streptococcus agalactiae 515]
Length = 278
Score = 318 bits (815), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/275 (56%), Positives = 200/275 (72%), Gaps = 8/275 (2%)
Query: 10 RDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDR 69
+DLA LP+ ++ D A PF+WTEVFL+ IN+ ++ILHIWPMT+TVILGMLDR
Sbjct: 4 QDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDR 63
Query: 70 QLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMV 129
+LP+ ELAK EI + GY PV RN GGLAVVAD+GILNFSLVIPD F +SIS+ YLIMV
Sbjct: 64 ELPHLELAKKEIISRGYEPVVRNFGGLAVVADEGILNFSLVIPDVFERKLSISDGYLIMV 123
Query: 130 DVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGD 189
D IR FSD+YQ IE+ E++ SYCPG FDLSI G+KFAG+AQRRIK GI VSIYLSVCGD
Sbjct: 124 DFIRSIFSDFYQPIEHFEVETSYCPGKFDLSINGKKFAGLAQRRIKNGIAVSIYLSVCGD 183
Query: 190 QAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQL 249
Q R ++I DFY+ G + + YP +DPE MA LS+LL+ P TV +V++R+ ++L+Q+
Sbjct: 184 QKGRSRMISDFYKIGLGDTGSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLISLKQV 243
Query: 250 GFSLTEKSPDQALLTNFDAV--YERMQLEVVRKEG 282
GF+ D+ L+ D V ++R Q + + +G
Sbjct: 244 GFN------DRLLMIRPDLVAEFDRFQAKSMANKG 272
>ref|NP_735542.1| hypothetical protein gbs1096 [Streptococcus agalactiae NEM316]
ref|ZP_00781137.1| biotin/lipoate A/B protein ligase family protein [Streptococcus
agalactiae 18RS21]
ref|ZP_00786863.1| Unknown [Streptococcus agalactiae CJB111]
emb|CAD46755.1| Unknown [Streptococcus agalactiae NEM316]
gb|EAO62278.1| biotin/lipoate A/B protein ligase family protein [Streptococcus
agalactiae 18RS21]
gb|EAO74400.1| Unknown [Streptococcus agalactiae CJB111]
Length = 278
Score = 317 bits (813), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 153/275 (55%), Positives = 200/275 (72%), Gaps = 8/275 (2%)
Query: 10 RDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDR 69
+DLA LP+ ++ D A PF+WTEVFL+ IN+ ++ILHIWPMT+TVILGMLDR
Sbjct: 4 QDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDR 63
Query: 70 QLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMV 129
+LP+ ELAK EI + GY PV RN GGLAVVAD+GILNFSL+IPD F +SIS+ YLIMV
Sbjct: 64 ELPHLELAKKEIISRGYEPVVRNFGGLAVVADEGILNFSLIIPDVFERKLSISDGYLIMV 123
Query: 130 DVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGD 189
D IR FSD+YQ IE+ E++ SYCPG FDLSI G+KFAG+AQRRIK GI VSIYLSVCGD
Sbjct: 124 DFIRSIFSDFYQPIEHFEVETSYCPGKFDLSINGKKFAGLAQRRIKNGIAVSIYLSVCGD 183
Query: 190 QAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQL 249
Q R ++I DFY+ G + + YP +DPE MA LS+LL+ P TV +V++R+ ++L+Q+
Sbjct: 184 QKERSRMISDFYKIGLGDTGSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLISLKQV 243
Query: 250 GFSLTEKSPDQALLTNFDAV--YERMQLEVVRKEG 282
GF+ D+ L+ D V ++R Q + + +G
Sbjct: 244 GFN------DRLLMIRPDLVAEFDRFQAKSMANKG 272
>ref|YP_329772.1| hypothetical protein SAK_1151 [Streptococcus agalactiae A909]
ref|ZP_00782596.1| lipoate-protein ligase A [Streptococcus agalactiae H36B]
gb|ABA44461.1| conserved hypothetical protein [Streptococcus agalactiae A909]
gb|EAO78678.1| lipoate-protein ligase A [Streptococcus agalactiae H36B]
Length = 277
Score = 314 bits (805), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 153/275 (55%), Positives = 200/275 (72%), Gaps = 8/275 (2%)
Query: 10 RDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDR 69
+DLA LP+ ++ D A PF+WTEVFL+ IN+ ++ILHIWPMT+TVILGMLDR
Sbjct: 4 QDLAQLPVSIFKDYVTDSQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDR 63
Query: 70 QLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMV 129
+LP+ ELAK EI + GY PV RN GGLAVVAD+GILNFSLVIPD F + +SIS+ YLIMV
Sbjct: 64 ELPHLELAKKEIISRGYEPVVRNFGGLAVVADEGILNFSLVIPDVFEKKLSISDGYLIMV 123
Query: 130 DVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGD 189
D IR FSD+YQ IE+ E++ SYCPG FDLSI G+KFAG+AQRRIK GI VSIYLSVCGD
Sbjct: 124 DFIRSIFSDFYQPIEHFEVETSYCPGKFDLSINGKKFAGLAQRRIKNGIAVSIYLSVCGD 183
Query: 190 QAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQL 249
Q R ++I DFY+ G + + YP +D E MA LS+LL+ P TV +V++R+ ++L+Q+
Sbjct: 184 QKERSRMISDFYKIGLGDTGSPIAYPNVDSEIMANLSDLLDCPMTVEDVIDRMLISLKQV 243
Query: 250 GFSLTEKSPDQALLTNFDAV--YERMQLEVVRKEG 282
GF+ D+ L+ D V ++R Q + + +G
Sbjct: 244 GFN------DRLLMIRPDLVAEFDRFQAKSMANKG 272
>pdb|2P0L|A Chain A, Crystal Structure Of A Lipoate-Protein Ligase A
Length = 288
Score = 305 bits (780), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/260 (57%), Positives = 187/260 (71%), Gaps = 4/260 (1%)
Query: 10 RDLASLPIFVYGDGNKKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDR 69
+DLA LP+ ++ D A PF+WTEVFL+ IN+ ++ILHIWP T+TVILG LDR
Sbjct: 6 QDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPXTKTVILGXLDR 65
Query: 70 QLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMV 129
+LP+ ELAK EI + GY PV RN GGLAVVAD+GILNFSLVIPD F +SIS+ YLI V
Sbjct: 66 ELPHLELAKKEIISRGYEPVVRNFGGLAVVADEGILNFSLVIPDVFERKLSISDGYLIXV 125
Query: 130 DVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGD 189
D IR FSD+YQ IE+ E++ SYCPG FDLSI G+KFAG+AQRRIK GI VSIYLSVCGD
Sbjct: 126 DFIRSIFSDFYQPIEHFEVETSYCPGKFDLSINGKKFAGLAQRRIKNGIAVSIYLSVCGD 185
Query: 190 QAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQL 249
Q R Q I DFY+ G + + YP +DPE A LS+LL+ P TV +V++R ++L+Q+
Sbjct: 186 QKGRSQXISDFYKIGLGDTGSPIAYPNVDPEIXANLSDLLDCPXTVEDVIDRXLISLKQV 245
Query: 250 GFS--LTEKSPDQALLTNFD 267
GF+ L PD L+ FD
Sbjct: 246 GFNDRLLXIRPD--LVAEFD 263
>ref|ZP_00875413.1| conserved hypothetical protein [Streptococcus suis 89/1591]
gb|EAP40419.1| conserved hypothetical protein [Streptococcus suis 89/1591]
Length = 275
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 149/237 (62%)
Query: 33 PFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRN 92
P VWTEVFL+ +N++ N ILH WPM +TVILGM+D Q+ + IG GY P+ R+
Sbjct: 26 PLVWTEVFLREVNRQSNTGILHFWPMDQTVILGMMDSQVAQLDKGLASIGQAGYSPIIRS 85
Query: 93 IGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSY 152
+GGLAVVADDGILN +L+ P+ + + +Y +MVD+I ++ SD+ + E+ SY
Sbjct: 86 LGGLAVVADDGILNVTLIFPNPSGHKVDLRESYQVMVDLIAQALSDFPFEVVSGEVATSY 145
Query: 153 CPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKV 212
CPG +DLSI GRKFAG+AQR ++ I +S Y+SV G+Q RGQ++ DFY A +
Sbjct: 146 CPGTYDLSIKGRKFAGLAQRIYQEAIAISAYISVSGNQVKRGQVVADFYAASFAPQEVSD 205
Query: 213 NYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
+PQ++P MA LS+L+ T+ ++ R+ L + G LT P + +F A+
Sbjct: 206 RFPQVNPNSMANLSDLVAQDLTMEDMKIRIEHVLIENGAFLTTFYPSSDNMADFMAL 262
>ref|YP_001197671.1| Lipoate-protein ligase A [Streptococcus suis 05ZYH33]
ref|YP_001199857.1| Lipoate-protein ligase A [Streptococcus suis 98HAH33]
gb|ABP89271.1| Lipoate-protein ligase A [Streptococcus suis 05ZYH33]
gb|ABP91457.1| Lipoate-protein ligase A [Streptococcus suis 98HAH33]
Length = 275
Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 149/234 (63%)
Query: 33 PFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRN 92
P VWTEVFL+ +N++ N ILH WPM +TVILGM+D Q+ + IG GY P+ R+
Sbjct: 26 PLVWTEVFLREVNRQSNTGILHFWPMDQTVILGMMDSQVAQLDKGLASIGQAGYSPIIRS 85
Query: 93 IGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSY 152
+GGLAVVAD+GILN +L++ + + + +Y +MVD+I ++ SD+ + E+ SY
Sbjct: 86 LGGLAVVADEGILNVTLILSNPSGHKVDLRESYQVMVDLIAQALSDFPFEVVSGEVATSY 145
Query: 153 CPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKV 212
CPG +DLSI GRKFAG+AQR ++ I +S Y+SV G+Q RGQ++ DFY A +
Sbjct: 146 CPGTYDLSIKGRKFAGLAQRIYQEAIAISAYISVSGNQVKRGQVVADFYVASFAPQEVSD 205
Query: 213 NYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNF 266
+PQ++P+ MA LS+L+ TV ++ +R+ L + G L+ P + +F
Sbjct: 206 RFPQVNPDSMANLSDLVGQDVTVEDMKKRIEQVLVENGTRLSTFYPSSDNMADF 259
>ref|ZP_02184334.1| lipoate-protein ligase A family protein, putative [Carnobacterium
sp. AT7]
gb|EDP68906.1| lipoate-protein ligase A family protein, putative [Carnobacterium
sp. AT7]
Length = 289
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 153/244 (62%), Gaps = 1/244 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
+S F T+ L+ + I+H WP VILGM+D +LPYF+ A + G +
Sbjct: 29 TISHFALTDSLLRYAGKYQKN-IVHFWPTINLVILGMMDTKLPYFKDALAVLEGYGQPYI 87
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LNFSL++P+ + + I+ Y M+ +I ++ + ++ +EIK
Sbjct: 88 VRNSGGLAVVGDEGVLNFSLILPEDPQQKMPINTGYDYMMQLINDALKPFGKKSLAYEIK 147
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
NSYCPG++DLSI G+KFAGI+QRR+K G+ + IY+SV G+Q R ++I+DFY+AG +GE
Sbjct: 148 NSYCPGDYDLSIDGKKFAGISQRRLKNGVAIMIYISVNGNQTKRAEMIRDFYQAGLKGET 207
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
K ++P +DP MATL +LL TVAE+ + TL Q ++ ++ +++
Sbjct: 208 VKWHFPSVDPAAMATLEDLLGISLTVAEMKNLILHTLLQNNCTIVAGEYSSEIIADYNEG 267
Query: 270 YERM 273
+E+M
Sbjct: 268 FEKM 271
>ref|NP_814874.1| lipoate-protein ligase A family protein, putative [Enterococcus
faecalis V583]
gb|AAO80944.1| lipoate-protein ligase A family protein, putative [Enterococcus
faecalis V583]
Length = 283
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 138/216 (63%), Gaps = 3/216 (1%)
Query: 33 PFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRN 92
PF T+V L T + +Q I+H W + + +ILGM D ++P+ + + N Y V RN
Sbjct: 28 PFALTDV-LTTFSGMQHQPIIHFWQLDQAMILGMKDTRVPHLKEGIASLQENDYSVVVRN 86
Query: 93 IGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSY 152
GGL V+AD GILN SL++P++ +SI AY +M +R+SF + + I+ EI SY
Sbjct: 87 AGGLGVIADSGILNVSLILPNNSEHKLSIDAAYELMWAWLRQSFPE--KEIDAFEITTSY 144
Query: 153 CPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKV 212
CPG +DLSI G+KFAGIAQRR+K GI V IY+SV G+Q ARG++++DFY AG Q + +
Sbjct: 145 CPGTYDLSIGGQKFAGIAQRRVKDGISVMIYISVNGNQLARGEVVRDFYLAGLQEQFGEN 204
Query: 213 NYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQ 248
YP +DP MA L L+ETP T+ V RL L Q
Sbjct: 205 GYPPVDPAVMANLETLIETPLTIDAVKTRLIEALPQ 240
>ref|YP_396246.1| hypothetical protein LSA1633 [Lactobacillus sakei subsp. sakei 23K]
emb|CAI55940.1| Hypothetical protein [Lactobacillus sakei subsp. sakei 23K]
Length = 280
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 155/261 (59%), Gaps = 4/261 (1%)
Query: 9 IRDLASL-PIFVYGDGNKKVPGALSPFVWTEV-FLKTINQEPNQLILHIWPMTRTVILGM 66
++DLA+L P + N++ + L + +E Q I+H W + +TVILGM
Sbjct: 1 MQDLATLYPQKTWSVVNQQFSADQGQLAFAHANTLLALTKECQQPIIHFWTLEKTVILGM 60
Query: 67 LDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYL 126
+D +LP A ++ GY RN GGL +VAD GILN +P+ ++ +SI+ AY
Sbjct: 61 MDTKLPELTAATDQLTAAGYHYFVRNAGGLGIVADTGILNLGFYLPE-VADHLSINAAYE 119
Query: 127 IMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSV 186
+M + E+F+ IE+ E+++SYCPG +DLSI G+KFAGIAQRR K GI + +Y S+
Sbjct: 120 LMKTLFSETFNTSNITIEHFEVQHSYCPGEYDLSINGQKFAGIAQRRSKNGIAILLYASI 179
Query: 187 CGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTL 246
GDQ ARG L++ FY+AG + T+ +P + PE MA L++LL P TVA V ++L +L
Sbjct: 180 EGDQQARGTLMQHFYQAGKAQQQTRWTFPDVHPETMANLADLLHQPLTVASVSQQLSASL 239
Query: 247 RQLGFSLTEKSPDQALLTNFD 267
Q LT +S Q L+ D
Sbjct: 240 -QSNSGLTLQSDLQTLMQEAD 259
>ref|YP_001696690.1| Hypothetical ywfL protein [Lysinibacillus sphaericus C3-41]
gb|ACA38560.1| Hypothetical ywfL protein [Lysinibacillus sphaericus C3-41]
Length = 278
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 107/270 (39%), Positives = 162/270 (60%), Gaps = 7/270 (2%)
Query: 9 IRDLASLPIFVYGDGN--KKVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGM 66
++ + PI+ Y D + K L F + + + Q + + W +V+LG+
Sbjct: 1 MKSILQQPIWRYYDQSISAKQRSPLESFATDDTLCQLVGQLVSPPTIRTWVHEASVVLGI 60
Query: 67 LDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYL 126
D +LPY + + + GY P+ RN GGLAVV D+GILN S+V+ + +S+SI++ Y
Sbjct: 61 QDHRLPYVQQGMDLLESRGYQPIVRNSGGLAVVLDEGILNISIVLSEQM-DSLSINDGYD 119
Query: 127 IMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSV 186
+MVD+++ F + ++IE +EI SYCPG++DLSI G+KFAGI+QRR+++G+ V IYL +
Sbjct: 120 VMVDLVKGLFPEVAEKIEAYEIVGSYCPGSYDLSIEGKKFAGISQRRLRQGVAVQIYLCI 179
Query: 187 CGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTL 246
G + R LI+DFYE Q E TK NYPQI PE MA+LSEL++ TV V+ RL+ L
Sbjct: 180 EGSGSQRAALIRDFYEESLQQEETKFNYPQIVPEVMASLSELVDLHLTVEGVVIRLQQLL 239
Query: 247 RQLGFSLTEKSPDQALLTNF----DAVYER 272
+L + +S LT + V+ER
Sbjct: 240 HRLAGEVHPESFHDEELTLYGFYLKRVFER 269
>ref|ZP_01697392.1| biotin/lipoate A/B protein ligase [Bacillus coagulans 36D1]
gb|EAY43368.1| biotin/lipoate A/B protein ligase [Bacillus coagulans 36D1]
Length = 277
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 141/244 (57%), Gaps = 1/244 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A F + + + ++ W TV LG+ D +LP+ E + N G+ +
Sbjct: 27 AAQSFAMDDTLCTAVGANASPAVVRTWVHHDTVSLGIQDTKLPFLEEGLAVLKNRGFRYI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D G+LN SLV+PD + + I+ Y M +++ FSD+ IE EI
Sbjct: 87 VRNSGGLAVVLDTGVLNISLVVPDT-EKGMDINRGYEAMWKLVQMMFSDFPVVIEAGEIA 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI G+KFAGI+QRR+++G+ V IYL V G A R +L++DFYE QG
Sbjct: 146 GSYCPGSYDLSIRGKKFAGISQRRVRRGVAVQIYLCVTGSGADRAELVRDFYERAKQGAE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK+ YP + PE MA+L+ELL+ TV +V RL TL+ LG L + + +
Sbjct: 206 TKLQYPCVRPEVMASLAELLQETLTVQDVFMRLLQTLKTLGSRLVSRPLSEQETEWYGKY 265
Query: 270 YERM 273
YERM
Sbjct: 266 YERM 269
>ref|NP_693943.1| hypothetical protein OB3021 [Oceanobacillus iheyensis HTE831]
dbj|BAC14977.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 279
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 147/244 (60%), Gaps = 2/244 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL+ F + ++++E + ++ +W ++T++LG+ D +LP+ + I N Y V
Sbjct: 31 ALTSFAVDDTLAISVSEETSPPVIRLWVHSKTIVLGIPDSRLPFIDSGMQFIEQNNYQAV 90
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAV D+G+LN SL+IP +++SI + Y MV I+ F D I+ +EI
Sbjct: 91 VRNSGGLAVALDEGVLNISLIIPG--GKNLSIYDCYEAMVRFIQAMFHDLTNDIKAYEIV 148
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI GRKFAGI+QRR+K GI V IYL V G+ R ++I++FY G +
Sbjct: 149 GSYCPGDYDLSIGGRKFAGISQRRVKNGISVQIYLDVEGNSNQRAEVIREFYNKGKKNME 208
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
T YP +DP+ M +LSELL TV +V +R+ TL +L + E + + NF
Sbjct: 209 TSFTYPDVDPKVMGSLSELLGVALTVDDVQKRVVHTLEKLSDEIVEIPFQEEEIVNFKKR 268
Query: 270 YERM 273
Y++M
Sbjct: 269 YKQM 272
>ref|YP_001812741.1| biotin/lipoate A/B protein ligase [Exiguobacterium sibiricum
255-15]
gb|ACB59724.1| biotin/lipoate A/B protein ligase [Exiguobacterium sibiricum
255-15]
Length = 273
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 130/199 (65%), Gaps = 2/199 (1%)
Query: 56 WPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHF 115
W TV+LG+ D +LP+ + + +G+ PV RN GGLAVV D G+LN SLV+P+
Sbjct: 49 WVHHETVVLGIQDARLPHLDDGIDVLHAHGFQPVIRNSGGLAVVLDAGVLNISLVLPER- 107
Query: 116 SESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIK 175
I I + Y M+ ++R F++ I E+ SYCPG++DLSIAG+KFAGI+QRR++
Sbjct: 108 -GGIDIDSGYEAMLALVRRMFAEETDAINAGEVVGSYCPGSYDLSIAGKKFAGISQRRVR 166
Query: 176 KGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTV 235
G+ V IYL V G +AR QL++DFY A QGE TK YP + PE MA+L ELL+ P TV
Sbjct: 167 GGVAVQIYLCVNGSGSARAQLVRDFYAAALQGETTKFVYPTVVPETMASLEELLQRPLTV 226
Query: 236 AEVLERLRLTLRQLGFSLT 254
+ L R+ +L +LG +LT
Sbjct: 227 EDCLVRVYRSLMELGATLT 245
>ref|NP_244689.1| hypothetical protein BH3822 [Bacillus halodurans C-125]
dbj|BAB07541.1| BH3822 [Bacillus halodurans C-125]
Length = 278
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 148/247 (59%), Gaps = 6/247 (2%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + + +I + + L W TV+LG+ D +LP + + + +
Sbjct: 27 ALQSFAYDDTLCTSIGKSQSPPTLRAWVHHNTVVLGIQDSRLPQIKAGIEALKGFQHDVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D GILN SLV+ + + SI + Y +M ++I F D+ ++IE EI
Sbjct: 87 VRNSGGLAVVLDSGILNLSLVLKE--EKGFSIDDGYELMYELICSMFQDHREQIEAREIV 144
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI G+KFAGI+QRRI+ G+ V IYL V G A R ++I+ FY+ G+
Sbjct: 145 GSYCPGSYDLSIDGKKFAGISQRRIRGGVAVQIYLCVSGSGAERAKMIRTFYDKAVAGQP 204
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFS-LTEK-SPDQALL--TN 265
TK YP+I PE MA+LSELL P V++VL + +TL+Q G S LTE S D+ LL +
Sbjct: 205 TKFVYPRIKPETMASLSELLGQPHNVSDVLLKALMTLQQHGASLLTESLSADEWLLYEQH 264
Query: 266 FDAVYER 272
F + ER
Sbjct: 265 FARISER 271
>ref|ZP_01173944.1| Lipoate-protein ligase A [Bacillus sp. NRRL B-14911]
gb|EAR63351.1| Lipoate-protein ligase A [Bacillus sp. NRRL B-14911]
Length = 353
Score = 184 bits (467), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 139/244 (56%), Gaps = 1/244 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A+ F + ++ W RT++LG+ D +LPY E + GY +
Sbjct: 96 AMHSFGMDDTLCASVGSGKTPATARAWVHDRTIVLGIQDSRLPYLEDGVDWLQEQGYRAI 155
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ P+ + I I+ Y M +I+E FSD+ IE EI
Sbjct: 156 VRNSGGLAVVLDEGVLNLSLIFPES-EKGIDINRGYDAMWLLIKEMFSDFPYEIEAREIV 214
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI GRKFAGI+QRR++KG+ V IYL V G + R L+++FY + V
Sbjct: 215 GSYCPGSYDLSIGGRKFAGISQRRLRKGVAVQIYLCVNGSGSGRAALVREFYTRAKKDAV 274
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK YP I P MA+LSELL++ TVA+V+ R L+ L ++ +++
Sbjct: 275 TKFLYPDITPPVMASLSELLQSELTVADVMMRFLNVLKSRSGRLYAGGLNEEEAGLYESY 334
Query: 270 YERM 273
YER+
Sbjct: 335 YERV 338
>ref|ZP_02915028.1| biotin/lipoate A/B protein ligase [Geobacillus sp. WCH70]
gb|EDT33845.1| biotin/lipoate A/B protein ligase [Geobacillus sp. WCH70]
Length = 278
Score = 184 bits (466), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 143/244 (58%), Gaps = 1/244 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A F + ++ + ++ W TV+LG+ D +LPY A + + Y +
Sbjct: 25 AKQSFAIDDTLCTSVGTGQSDTVVRTWVHYNTVVLGIQDAKLPYLHDAVSFLKAQKYNVI 84
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ P+ +++I I+ Y M +I+ FS Y + IE EI
Sbjct: 85 VRNSGGLAVVLDEGVLNISLIFPET-TKAIDINQGYEAMWQLIQAMFSAYNKTIEAREIV 143
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSIAG+KFAGI+QRR++ G+ V IYL + G +AR +LI+ FYE G +GE
Sbjct: 144 GSYCPGSYDLSIAGKKFAGISQRRVRGGVAVQIYLCINGSGSARAELIRQFYELGLKGET 203
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK YP I P MA+LSELL T+ V+ L TL+ G L + L+ ++
Sbjct: 204 TKFVYPTIVPSTMASLSELLNEDLTIPSVMLLLLRTLQSFGGELYSSALTGEELSLYEYY 263
Query: 270 YERM 273
++R+
Sbjct: 264 WDRI 267
>ref|NP_472040.1| hypothetical protein lin2711 [Listeria innocua Clip11262]
emb|CAC97937.1| lin2711 [Listeria innocua]
Length = 278
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 140/244 (57%), Gaps = 1/244 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A+ F + +++ + W +TV LG+ D +LP + + GY V
Sbjct: 27 AIQSFATDDTLCRSVGARMVPPTVRGWVHEKTVSLGIQDSKLPDIDKGIAFLQEQGYRVV 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D G+LN S+V+PD I+I Y M +I++ F D + IE EI
Sbjct: 87 VRNSGGLAVVLDSGVLNLSMVLPDA-ERGIAIERGYETMFTLIKDMFVDCNEVIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
NSYCPG++DLSI G+KFAGI+QRR+ KG+ V IYL+V GDQAAR +LI+DFY + +
Sbjct: 146 NSYCPGSYDLSIQGQKFAGISQRRMAKGVAVQIYLAVEGDQAARSELIRDFYTISGKDKQ 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK ++P + PE M TLS+L++ TV L RL +LR L + L F A
Sbjct: 206 TKYSFPDVKPEVMGTLSDLMKENMTVNGCLVRLFNSLRHYAGKLESGTLTPEELDLFPAY 265
Query: 270 YERM 273
YER+
Sbjct: 266 YERL 269
>ref|YP_149267.1| hypothetical protein GK3414 [Geobacillus kaustophilus HTA426]
dbj|BAD77699.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 283
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 136/244 (55%), Gaps = 1/244 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A F + + + ++ W TV+LG D +LPY + A + + GY V
Sbjct: 25 AKQSFAIDDALCTAVGAGQSDAVVRTWVHENTVVLGAADTKLPYIDEAISFLRQEGYRVV 84
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D G+LN SL+ P+ +I+I Y M ++ + Y R+E EI
Sbjct: 85 VRNSGGLAVVLDSGVLNISLIFPET-KNTIAIEQGYEAMYALMAAMLASYGARVEAGEIV 143
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI G+KFAGI+QRR++ G+ V IYL V G AAR +LI+ FYE G QGE
Sbjct: 144 GSYCPGSYDLSIGGKKFAGISQRRVRGGVAVQIYLCVNGSGAARAELIRRFYELGRQGEK 203
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK YP + P MA+LSELL ++ E+L L TL+ G L + + ++
Sbjct: 204 TKFAYPDVVPTVMASLSELLGCELSIDELLVALWRTLQSFGGELYSSALENGEWNWYEQY 263
Query: 270 YERM 273
+ R+
Sbjct: 264 WARI 267
>ref|ZP_02688753.1| hypothetical protein LmonFSL_16100 [Listeria monocytogenes FSL
J2-071]
Length = 278
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 142/244 (58%), Gaps = 1/244 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A+ F + +++ + W +TV LG+ D +LP + T + GY V
Sbjct: 27 AIQSFATDDTLCRSVGARIAPSTVRGWVHEKTVSLGIQDSKLPDIDKGITFLQEQGYRVV 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D G+LN S+V+PD I+I Y M +I++ F D + IE EI+
Sbjct: 87 VRNSGGLAVVLDSGVLNLSMVLPDA-ERGIAIERGYETMFTLIKDMFVDCNEVIEAKEIE 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
+SYCPG++DLSI G+KFAGI+QRR+ KG+ V IYL++ GDQ AR +LI+DFY + +
Sbjct: 146 DSYCPGSYDLSIQGKKFAGISQRRMAKGVAVQIYLAIDGDQTARSELIRDFYTISGKAKQ 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK +P ++P+ M +LS+L++ ++ + L RL +LR L + L F A
Sbjct: 206 TKYTFPNVNPDVMGSLSDLMKADISLNDTLVRLFNSLRHYAGELVSGTLTPEELDLFPAY 265
Query: 270 YERM 273
YER+
Sbjct: 266 YERL 269
>ref|ZP_01274998.1| Biotin/lipoate A/B protein ligase [Lactobacillus reuteri 100-23]
gb|EAS88031.1| Biotin/lipoate A/B protein ligase [Lactobacillus reuteri 100-23]
Length = 274
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 137/214 (64%), Gaps = 4/214 (1%)
Query: 31 LSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVT 90
LS F++T L++ + E +LH W + TVILG+ D++LP+ A + + G+
Sbjct: 22 LSSFIYTNALLRSAS-ELKFPLLHFWTLEDTVILGLKDQRLPHLSTALASLTHRGFHYFM 80
Query: 91 RNIGGLAVVADDGILNFSLVIPDHFSES-ISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV+DDGILN S+ P H + ++I AY MV++I+ +F I EI
Sbjct: 81 RNSGGLAVVSDDGILNLSIFYPWHLEDHELTIDEAYQRMVNLIQAAFPSL--EIATGEIT 138
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
+SYCPG+FD+S+ G+K GI+QRR K G+ V +YLSVCG+Q RG+LI+DFY+ G Q +
Sbjct: 139 HSYCPGSFDISVNGQKIGGISQRRNKVGVTVMLYLSVCGNQQDRGKLIRDFYDTGLQQDQ 198
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLR 243
K ++P + P M T+S+ L T +V + ++R++
Sbjct: 199 NKWHFPDVWPGAMTTISKALNTQLSVQDAIQRIQ 232
>ref|ZP_02990278.1| biotin/lipoate A/B protein ligase [Exiguobacterium sp. AT1b]
gb|EDU22122.1| biotin/lipoate A/B protein ligase [Exiguobacterium sp. AT1b]
Length = 280
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 2/190 (1%)
Query: 52 ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
+L W T T++LG+ D +LP+ + + G+ PV RN GGLAVV DD +LN SL++
Sbjct: 45 VLRAWVHTDTIVLGIQDARLPHLKEGIRYLHEQGFRPVVRNSGGLAVVLDDDVLNLSLIL 104
Query: 112 PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQ 171
P+ + I I + Y M +I+ F D I E+ SYCPG+FDLSI G+KFAGI+Q
Sbjct: 105 PE--KDGIQIDSGYEAMTSLIQHMFQDVTNDIVPGEVVGSYCPGSFDLSIDGKKFAGISQ 162
Query: 172 RRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLET 231
RR++ G+ V IYLSV +AR ++I+DFY+ QGE TK YP I PE MA+L +LL
Sbjct: 163 RRVRGGVAVQIYLSVRQSGSARAEIIRDFYDLAIQGEETKFTYPTIVPETMASLEDLLGI 222
Query: 232 PFTVAEVLER 241
P TV +VL R
Sbjct: 223 PLTVQDVLTR 232
>ref|YP_001127442.1| Lipoate-protein ligase A [Geobacillus thermodenitrificans NG80-2]
gb|ABO68697.1| Lipoate-protein ligase A [Geobacillus thermodenitrificans NG80-2]
Length = 286
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 133/244 (54%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A F + + + ++ W TV+LG D +LPY + A + GY V
Sbjct: 25 AKQSFATDDTLCTAVGTGRSDAVVRTWVHENTVVLGAADTKLPYIDEAVAFLRQRGYRVV 84
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D G+LN SL+ P+ I+I Y M +I + Y IE E+
Sbjct: 85 VRNSGGLAVVLDSGVLNISLIFPETKKHMIAIEQGYEAMYALIAAMLAPYGANIEAGEVV 144
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI G+KFAGI+QRR++ G+ V IYL V G A R +LI+ FYE G QG+
Sbjct: 145 GSYCPGSYDLSIGGKKFAGISQRRVRGGVAVQIYLCVTGSGAERAELIRCFYELGRQGKE 204
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK YP + P MA+LSEL+ +V E+L L TL+ G +L + D ++
Sbjct: 205 TKFTYPDVVPGVMASLSELIGRELSVDELLVALWRTLQSFGGALYSSALDGEEWEWYEQY 264
Query: 270 YERM 273
+ R+
Sbjct: 265 WARI 268
>pdb|2P5I|A Chain A, Crystal Structure Of Protein Bh3822 From Bacillus
Halodurans, A Member Of The BiotinLIPOATE AB PROTEIN
Ligase Family
Length = 288
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 151/257 (58%), Gaps = 7/257 (2%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + + +I + + L W TV+LG+ D +LP + + + +
Sbjct: 29 ALQSFAYDDTLCTSIGKSQSPPTLRAWVHHNTVVLGIQDSRLPQIKAGIEALKGFQHDVI 88
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D GILN SLV+ + + SI + Y + ++I F D+ ++IE EI
Sbjct: 89 VRNSGGLAVVLDSGILNLSLVLKE--EKGFSIDDGYELXYELICSXFQDHREQIEAREIV 146
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI G+KFAGI+QRRI+ G+ V IYL V G A R + I+ FY+ G+
Sbjct: 147 GSYCPGSYDLSIDGKKFAGISQRRIRGGVAVQIYLCVSGSGAERAKXIRTFYDKAVAGQP 206
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFS-LTEK-SPDQALL--TN 265
TK YP+I PE A+LSELL P V++VL + TL+Q G S LTE S D+ LL +
Sbjct: 207 TKFVYPRIKPETXASLSELLGQPHNVSDVLLKALXTLQQHGASLLTESLSADEWLLYEQH 266
Query: 266 FDAVYERMQLEVVRKEG 282
F + ER + +++ +EG
Sbjct: 267 FARISERNE-KLLAEEG 282
>ref|ZP_01861253.1| Lipoate-protein ligase A [Bacillus sp. SG-1]
gb|EDL63695.1| Lipoate-protein ligase A [Bacillus sp. SG-1]
Length = 279
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 143/247 (57%), Gaps = 5/247 (2%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + ++ + W T++LG+ D +LP E + GY +
Sbjct: 27 ALQSFAIDDTLCTSVGAGNSPATARAWVHHNTIVLGIQDTKLPALEDGLKVLEELGYRYI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SLV PD + I I+ Y M+ + + F D+ +IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNLSLVFPDS-EKGIDINRGYDAMLQLTEDMFKDFPVKIEAKEII 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
NSYCPG++DLSI G+KFAGI+QRRI+ G+ V IYL V G + R ++I+DFY AG + E
Sbjct: 146 NSYCPGSYDLSINGQKFAGISQRRIRNGVAVQIYLCVTGSGSERAKVIRDFYNAGKREES 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSL--TEKSPDQALL--TN 265
K +P+I+P+CMA+LSELL T+ + + R +L+ + ++ D+ L +
Sbjct: 206 KKFIFPEIEPDCMASLSELLGVSLTIQDTMLRFLQSLKNFSGRIYASQLEGDEIPLYESY 265
Query: 266 FDAVYER 272
FD V++R
Sbjct: 266 FDRVHQR 272
>ref|YP_001270832.1| biotin/lipoate A/B protein ligase [Lactobacillus reuteri F275]
ref|YP_001841212.1| hypothetical protein LAR_0216 [Lactobacillus reuteri F275]
gb|ABQ82495.1| biotin/lipoate A/B protein ligase [Lactobacillus reuteri F275]
dbj|BAG24732.1| conserved hypothetical protein [Lactobacillus reuteri F275]
Length = 274
Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 136/214 (63%), Gaps = 4/214 (1%)
Query: 31 LSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVT 90
LS F++T L++ + E +LH W + TVILG+ D++LP+ A + + G+
Sbjct: 22 LSSFIYTNALLRSAS-ELKFPLLHFWTLEDTVILGLKDQRLPHLSTALASLTHRGFHYFM 80
Query: 91 RNIGGLAVVADDGILNFSLVIPDHFSES-ISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV+DDGILN S+ P H + ++I AY MV++I+ +F I EI
Sbjct: 81 RNSGGLAVVSDDGILNLSIFYPWHLEDHELTIDEAYQRMVNLIQAAFPSL--EIATGEIT 138
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG+FD+S+ G+K GI+QRR K G+ V +YLSVCG+Q RG+LI+DFY+ G Q +
Sbjct: 139 YSYCPGSFDISVNGQKIGGISQRRNKVGVTVMLYLSVCGNQQDRGKLIRDFYDTGLQQDQ 198
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLR 243
K ++P + P M T+S+ L T +V + ++R++
Sbjct: 199 NKWHFPDVWPGAMTTISKALNTQLSVQDAIQRIQ 232
>ref|NP_466089.1| hypothetical protein lmo2566 [Listeria monocytogenes EGD-e]
ref|ZP_02310141.1| hypothetical protein LmonocytFSL_21251 [Listeria monocytogenes FSL
J2-003]
emb|CAD00644.1| lmo2566 [Listeria monocytogenes]
Length = 278
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 138/244 (56%), Gaps = 1/244 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A+ F + +++ + W +TV LG+ D +LP + + GY V
Sbjct: 27 AIQSFATDDTLCRSVGARMAPSTVRGWVHEKTVSLGIQDSKLPDIDKGIAFLQKQGYRVV 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D G+LN S+V+PD I+I Y M +I++ F D + IE EI+
Sbjct: 87 VRNSGGLAVVLDSGVLNLSMVLPDA-ERGIAIERGYETMFTLIKDMFVDCNEVIEAKEIE 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
+SYCPG++DLSI G+KFAGI+QRR+ KG+ V IYL++ GDQ R +LI+DFY + +
Sbjct: 146 DSYCPGSYDLSIQGKKFAGISQRRMAKGVAVQIYLAIDGDQTTRSELIRDFYTISGKAKQ 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK +P ++P M +LS+L++ ++ L RL +LR L + L F A
Sbjct: 206 TKYTFPDVNPNVMGSLSDLMKNDISLNGTLVRLFNSLRHYAGDLVSGTLTSEELDLFPAY 265
Query: 270 YERM 273
YER+
Sbjct: 266 YERL 269
>ref|YP_302213.1| putative lipoate-protein ligase A [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
dbj|BAE19268.1| putative lipoate-protein ligase A [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 278
Score = 177 bits (448), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 139/244 (56%), Gaps = 3/244 (1%)
Query: 31 LSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYF-ELAKTEIGNNGYVPV 89
+ F + + F +++ ++ + ++ W TVILG+ D +LP+ E + GY +
Sbjct: 25 MQSFAFDDTFSESVGKDLSCSVVRTWVHQHTVILGIHDSRLPHLQEGIRYLTEERGYNAI 84
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGL VV D G+LN SL+ I+I A+ +M +I + F D I+ HEI+
Sbjct: 85 VRNSGGLGVVLDQGVLNISLLFKG--KHDITIDEAFTVMYLLIAKMFEDEDVDIDTHEIE 142
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG FDLSI G+KFAGI+QRR++ GI V +YL V GD + R ++K FY QGE
Sbjct: 143 RSYCPGKFDLSINGKKFAGISQRRVRGGIAVQVYLCVEGDGSERADMMKSFYARALQGEE 202
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK YP I+P+CMA+L LL TV +V+ +L ++ LG L +++
Sbjct: 203 TKFTYPDIEPQCMASLETLLGRTITVQDVMFQLLYAIKDLGGRLNMNPITDEEWLSYEGY 262
Query: 270 YERM 273
+E+M
Sbjct: 263 FEKM 266
>ref|ZP_00234678.1| biotin/lipoate A/B protein ligase family protein [Listeria
monocytogenes str. 1/2a F6854]
ref|ZP_01931123.1| hypothetical protein LMIG_02740 [Listeria monocytogenes FSL N3-165]
ref|ZP_01933695.1| hypothetical protein LMMG_02680 [Listeria monocytogenes F6900]
ref|ZP_01936634.1| hypothetical protein LMOG_02593 [Listeria monocytogenes J0161]
ref|ZP_01939264.1| hypothetical protein LMPG_02525 [Listeria monocytogenes J2818]
ref|ZP_01942408.1| hypothetical protein LMRG_02703 [Listeria monocytogenes 10403S]
ref|ZP_02283503.1| hypothetical protein LmonL_23001 [Listeria monocytogenes LO28]
gb|EAL05478.1| biotin/lipoate A/B protein ligase family protein [Listeria
monocytogenes str. 1/2a F6854]
gb|EBA19175.1| hypothetical protein LMOG_02593 [Listeria monocytogenes J0161]
gb|EBA21783.1| hypothetical protein LMRG_02703 [Listeria monocytogenes 10403S]
gb|EBA24843.1| hypothetical protein LMPG_02525 [Listeria monocytogenes J2818]
gb|EBA30747.1| hypothetical protein LMIG_02740 [Listeria monocytogenes FSL N3-165]
gb|EBA33509.1| hypothetical protein LMMG_02680 [Listeria monocytogenes F6900]
Length = 278
Score = 177 bits (448), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 138/244 (56%), Gaps = 1/244 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A+ F + +++ + W +TV LG+ D +LP + + GY V
Sbjct: 27 AIQSFATDDTLCRSVGARMAPSTVRGWVHEKTVSLGIQDSKLPDIDKGIAFLQKQGYRVV 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D G+LN S+V+PD I+I Y M +I++ F D + IE EI+
Sbjct: 87 VRNSGGLAVVLDSGVLNLSMVLPDA-ERGIAIERGYETMFTLIKDMFVDCNEVIEAKEIE 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
+SYCPG++DLSI G+KFAGI+QRR+ KG+ V IYL++ GDQ R +LI+DFY + +
Sbjct: 146 DSYCPGSYDLSIQGKKFAGISQRRMAKGVAVQIYLAIDGDQTTRSELIRDFYTISGKAKQ 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK +P ++P M +LS+L++ ++ L RL +LR L + L F A
Sbjct: 206 TKYTFPDVNPNVMGSLSDLMKNDISLNGTLVRLFNSLRHYAGELVSGTLTSEELDLFPAY 265
Query: 270 YERM 273
YER+
Sbjct: 266 YERL 269
>ref|ZP_00231333.1| biotin/lipoate A/B protein ligase family protein [Listeria
monocytogenes str. 4b H7858]
ref|ZP_01928491.1| hypothetical protein LMHG_02609 [Listeria monocytogenes FSL N1-017]
ref|ZP_01944999.1| hypothetical protein LMSG_02630 [Listeria monocytogenes HPB2262]
ref|ZP_02285532.1| biotin/lipoate A/B protein ligase family protein [Listeria
monocytogenes FSL R2-503]
ref|ZP_02287994.1| biotin/lipoate A/B protein ligase family protein [Listeria
monocytogenes FSL J1-175]
gb|EAL08819.1| biotin/lipoate A/B protein ligase family protein [Listeria
monocytogenes str. 4b H7858]
gb|EBA27802.1| hypothetical protein LMHG_02609 [Listeria monocytogenes FSL N1-017]
gb|EBA35987.1| hypothetical protein LMSG_02630 [Listeria monocytogenes HPB2262]
Length = 278
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 138/244 (56%), Gaps = 1/244 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A+ F + +++ + W +TV LG+ D +LP + + GY V
Sbjct: 27 AIQSFATDDTLCRSVGARMAPSTVRGWVHEKTVSLGIQDSKLPDIDKGIAFLQEQGYRVV 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D G+LN S+V+PD I+I Y M +I++ F D + IE EI+
Sbjct: 87 VRNSGGLAVVLDSGVLNLSMVLPDA-ERGIAIERGYETMFTLIKDMFVDCNEVIEAKEIE 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
+SYCPG++DLSI G+KFAGI+QRR+ KG+ V IYL++ GDQ R +LI+DFY + +
Sbjct: 146 DSYCPGSYDLSIQGKKFAGISQRRMAKGVAVQIYLAIDGDQTTRSELIRDFYTISGKAKQ 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK +P ++P M +LS+L++ ++ L RL +LR L + L F A
Sbjct: 206 TKYTFPDVNPNVMGSLSDLMKNDISLNGTLVRLFNSLRHYAGELVSGTLTSEELDLFPAY 265
Query: 270 YERM 273
YER+
Sbjct: 266 YERL 269
>ref|ZP_02543291.1| lipoate-protein ligase A [Bacillus cereus W]
Length = 281
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 131/225 (58%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + + W T++LG+ D +LP+ E + + N + +
Sbjct: 27 ALQSFAMDDTLCTSIGKGESAATMRSWVHHNTIVLGIQDSRLPHLEEGISFLKENNFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + +SI I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQET-EKSIDIDLGYDTMWHLIQEMLKDYDVTIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSICDQKFAGISQRRIRGGVAVQIYLCATGSGSERAALVRDFYNLAIQGEE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP+I P MA+LSELL+ TV +++ RL TL+Q LT
Sbjct: 206 TRFTYPEIVPSTMASLSELLDETITVQDLMMRLLKTLQQFAPKLT 250
>ref|YP_850713.1| biotin/lipoate A/B protein ligase family protein [Listeria
welshimeri serovar 6b str. SLCC5334]
emb|CAK21934.1| lplA [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 278
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 136/244 (55%), Gaps = 1/244 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A+ F + +++ + W +TV LG+ D +LP + + GY V
Sbjct: 27 AIQSFATDDTLCRSVGARMVPSTVRGWVHDKTVSLGIQDSKLPDIDKGIAFLQEQGYRVV 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D G+LN S+V+PD I+I Y M +I++ F D + IE EI
Sbjct: 87 VRNSGGLAVVLDAGVLNLSMVLPDA-ERGIAIERGYETMFTLIKDMFVDCKEVIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
NSYCPG++DLSI G KFAGI+QRR+ KG+ V IYL++ G+QA R LI+DFY + +
Sbjct: 146 NSYCPGSYDLSIQGLKFAGISQRRMAKGVAVQIYLAIEGNQAERSTLIRDFYTISGKDKQ 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK +P + PE M TLS+L++ TV L RL +LR L + L F A
Sbjct: 206 TKYTFPDVKPEVMGTLSDLIKEDITVNGCLVRLFNSLRHYAGRLESGTLTSDELDLFPAY 265
Query: 270 YERM 273
YER+
Sbjct: 266 YERL 269
>ref|YP_015126.1| biotin/lipoate A/B protein ligase family protein [Listeria
monocytogenes str. 4b F2365]
gb|AAT05303.1| biotin/lipoate A/B protein ligase family protein [Listeria
monocytogenes str. 4b F2365]
Length = 278
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 137/244 (56%), Gaps = 1/244 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A+ F + +++ + W +TV LG+ D +LP + + GY V
Sbjct: 27 AIQSFATDDTLCRSVGARMAPSTVRGWVHEKTVSLGIQDSKLPDIDKGIAFLQEQGYRVV 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D G+LN S+V+PD I+I Y M +I++ F D + IE EI+
Sbjct: 87 VRNSGGLAVVLDSGVLNLSMVLPDA-ERGIAIERGYETMFTLIKDMFVDCNEVIEAKEIE 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
+SYCPG++DLSI G KFAGI+QRR+ KG+ V IYL++ GDQ R +LI+DFY + +
Sbjct: 146 DSYCPGSYDLSIQGEKFAGISQRRMAKGVAVQIYLAIDGDQTTRSELIRDFYTISGKAKQ 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK +P ++P M +LS+L++ ++ L RL +LR L + L F A
Sbjct: 206 TKYTFPDVNPNVMGSLSDLMKNDISLNGTLVRLFNSLRHYAGELVSGTLTSEELDLFPAY 265
Query: 270 YERM 273
YER+
Sbjct: 266 YERL 269
>ref|NP_371113.1| putative lipoate-protein ligase A [Staphylococcus aureus subsp.
aureus Mu50]
ref|NP_373800.1| hypothetical protein SA0546 [Staphylococcus aureus subsp. aureus
N315]
ref|YP_416035.1| lipoate-protein ligase A protein [Staphylococcus aureus RF122]
ref|YP_001245992.1| Lipoate-protein ligase A-like protein [Staphylococcus aureus subsp.
aureus JH9]
ref|YP_001315772.1| lipoate-protein ligase A protein [Staphylococcus aureus subsp.
aureus JH1]
ref|YP_001441177.1| hypothetical protein SAHV_0587 [Staphylococcus aureus subsp. aureus
Mu3]
dbj|BAB41778.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
dbj|BAB56751.1| putative lipoate-protein ligase A [Staphylococcus aureus subsp.
aureus Mu50]
emb|CAI80227.1| lipoate-protein ligase A protein [Staphylococcus aureus RF122]
gb|ABQ48416.1| Lipoate-protein ligase A-like protein [Staphylococcus aureus subsp.
aureus JH9]
gb|ABR51485.1| lipoate-protein ligase A protein [Staphylococcus aureus subsp.
aureus JH1]
dbj|BAF77470.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
Length = 278
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 139/244 (56%), Gaps = 3/244 (1%)
Query: 31 LSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNN-GYVPV 89
+ F + + F +++ ++ + ++ W TVILG+ D +LP+ + + N GY +
Sbjct: 25 MQSFAFDDTFCESVGKDISDNVVRTWIHQHTVILGIHDSRLPFLKDGIDYLTNEIGYNAI 84
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGL VV D G+LN SL+ +I A+ +M +I + F D I+ EI+
Sbjct: 85 VRNSGGLGVVLDQGVLNISLMFKGQ--TETTIDEAFTVMYLLISKMFEDENVDIDTMEIE 142
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
+SYCPG FDLSI G+KFAGI+QRR++ GI V IYL V G + R +++ FYE +GEV
Sbjct: 143 HSYCPGKFDLSIDGKKFAGISQRRVRGGIAVQIYLCVEGSGSERALMMQTFYEHALKGEV 202
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK YP+I+P CMA+L LL TV +V+ L ++ LG L Q +D
Sbjct: 203 TKFKYPEIEPSCMASLETLLNKTITVQDVMFLLLYAIKDLGGVLNMTPITQEEWQRYDTY 262
Query: 270 YERM 273
+++M
Sbjct: 263 FDKM 266
>ref|YP_040043.1| lipoate-protein ligase A protein [Staphylococcus aureus subsp.
aureus MRSA252]
emb|CAG39615.1| lipoate-protein ligase A protein [Staphylococcus aureus subsp.
aureus MRSA252]
Length = 278
Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 139/244 (56%), Gaps = 3/244 (1%)
Query: 31 LSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNN-GYVPV 89
+ F + + F +++ ++ + ++ W TVILG+ D +LP+ + + N GY +
Sbjct: 25 MQSFAFDDTFCESVGKDISDNVVRTWIHQHTVILGIHDSRLPFLKDGIDYLTNEIGYNAI 84
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGL VV D G+LN SL+ +I A+ +M +I + F D I+ EI+
Sbjct: 85 VRNSGGLGVVLDQGVLNISLMFKGQ--TETTIDEAFTVMYLLISKMFEDENFDIDTMEIE 142
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
+SYCPG FDLSI G+KFAGI+QRR++ GI V IYL V G + R +++ FYE +GEV
Sbjct: 143 HSYCPGKFDLSIDGKKFAGISQRRVRGGIAVQIYLCVEGSGSERALMMQTFYEHALKGEV 202
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK YP+I+P CMA+L LL TV +V+ L ++ LG L Q +D
Sbjct: 203 TKFKYPEIEPSCMASLETLLNKTITVQDVMFLLLYAIKDLGGVLNMTPITQEEWQRYDTY 262
Query: 270 YERM 273
+++M
Sbjct: 263 FDKM 266
>ref|YP_794672.1| Lipoate-protein ligase A [Lactobacillus brevis ATCC 367]
gb|ABJ63641.1| Lipoate-protein ligase A [Lactobacillus brevis ATCC 367]
Length = 279
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 141/249 (56%), Gaps = 5/249 (2%)
Query: 34 FVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNI 93
F +T L + E Q ILH W M TVI+G+ D++LP A + GY V RN
Sbjct: 26 FGYTNALLDLV-AELKQPILHFWTMHPTVIMGLKDKRLPDLTAAIKAVQRYGYDYVLRNS 84
Query: 94 GGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYC 153
GGLAVV+D GILN SL P + +S+ AY M ++ ++ + I++++I +SYC
Sbjct: 85 GGLAVVSDAGILNVSLFAP-LTTPPMSVDAAYAQMTALVDAAWPEL--AIQHYKITHSYC 141
Query: 154 PGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVN 213
PG++DLS+ G K AGIAQRR +V +YLSV GDQ ARGQ+I+DFY AG G+
Sbjct: 142 PGDYDLSVNGLKIAGIAQRRSPHALVTMLYLSVNGDQLARGQMIRDFYTAGLAGQENTWA 201
Query: 214 YPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLT-NFDAVYER 272
+P +DP M T + LL T+A+ +R Q G ++ + QA+ T F A +
Sbjct: 202 FPDVDPATMTTTAALLGQNLTIADAQQRFITAAEQAGLNVGRTTLAQAMATPEFGAHLDH 261
Query: 273 MQLEVVRKE 281
++ R++
Sbjct: 262 ATAQMARRQ 270
>ref|ZP_02263644.1| lipoate-protein ligase A [Bacillus cereus AH820]
Length = 281
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 130/225 (57%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + + W T++LG+ D +LP+ E + + N + +
Sbjct: 27 ALQSFAMDDTLCTSIGKGESAATMRSWVHHNTIVLGIQDSRLPHLEEGISFLKENNFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQET-EKGIDIDLGYDTMWHLIQEMLKDYDVTIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSIRDQKFAGISQRRIRGGVAVQIYLCATGSGSERAALVRDFYNLAIQGEE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP+I P MA+LSELL+ TV +++ RL TL+Q LT
Sbjct: 206 TRFTYPEIVPSTMASLSELLDETITVQDLMMRLLKTLQQFAPKLT 250
>ref|NP_645361.1| hypothetical protein MW0544 [Staphylococcus aureus subsp. aureus
MW2]
ref|YP_493274.1| lipoate-protein ligase A family protein [Staphylococcus aureus
subsp. aureus USA300]
ref|YP_499143.1| hypothetical protein SAOUHSC_00575 [Staphylococcus aureus subsp.
aureus NCTC 8325]
dbj|BAB94409.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gb|ABD21823.1| lipoate-protein ligase A family protein [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gb|ABD29718.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
Length = 254
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 139/244 (56%), Gaps = 3/244 (1%)
Query: 31 LSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNN-GYVPV 89
+ F + + F +++ ++ + ++ W TVILG+ D +LP+ + + N GY +
Sbjct: 1 MQSFAFDDTFCESVGKDISDNVVRTWIHQHTVILGIHDSRLPFLKDGIDYLTNEIGYNAI 60
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGL VV D G+LN SL+ +I A+ +M +I + F + I+ EI+
Sbjct: 61 VRNSGGLGVVLDQGVLNISLMFKGQ--TETTIDEAFTVMYLLISKMFENENVDIDTMEIE 118
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
+SYCPG FDLSI G+KFAGI+QRR++ GI V IYL V G + R +++ FYE +GEV
Sbjct: 119 HSYCPGKFDLSIDGKKFAGISQRRVRGGIAVQIYLCVEGSGSERALMMQTFYEHALKGEV 178
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK YP+I+P CMA+L LL TV +V+ L ++ LG L Q +D
Sbjct: 179 TKFKYPEIEPSCMASLETLLNKTITVQDVMFLLLYAIKDLGGVLNMTPITQEEWQRYDTY 238
Query: 270 YERM 273
+++M
Sbjct: 239 FDKM 242
>ref|NP_847785.1| lipoate-protein ligase A, putative [Bacillus anthracis str. Ames]
ref|YP_022310.1| lipoate-protein ligase a, putative [Bacillus anthracis str. 'Ames
Ancestor']
ref|YP_031475.1| lipoate-protein ligase A, putative [Bacillus anthracis str. Sterne]
ref|YP_039377.1| lipoate-protein ligase A [Bacillus thuringiensis serovar konkukian
str. 97-27]
ref|ZP_00390325.1| COG0095: Lipoate-protein ligase A [Bacillus anthracis str. A2012]
ref|ZP_02215904.1| putative lipoate-protein ligase A [Bacillus anthracis str. A0488]
ref|ZP_02394088.1| putative lipoate-protein ligase A [Bacillus anthracis str. A0442]
ref|ZP_02398643.1| putative lipoate-protein ligase A [Bacillus anthracis str. A0193]
ref|ZP_02610036.1| lipoate-protein ligase A [Bacillus anthracis Tsiankovskii-I]
ref|ZP_02879349.1| putative lipoate-protein ligase A [Bacillus anthracis str. A0465]
ref|ZP_02898541.1| putative lipoate-protein ligase A [Bacillus anthracis str. A0389]
ref|ZP_02934496.1| putative lipoate-protein ligase A [Bacillus anthracis str. A0174]
gb|AAP29271.1| lipoate-protein ligase A, putative [Bacillus anthracis str. Ames]
gb|AAT34785.1| lipoate-protein ligase A, putative [Bacillus anthracis str. 'Ames
Ancestor']
gb|AAT57525.1| lipoate-protein ligase A, putative [Bacillus anthracis str. Sterne]
gb|AAT63493.1| lipoate-protein ligase A [Bacillus thuringiensis serovar konkukian
str. 97-27]
gb|EDR18450.1| putative lipoate-protein ligase A [Bacillus anthracis str. A0488]
gb|EDR86981.1| putative lipoate-protein ligase A [Bacillus anthracis str. A0193]
gb|EDR91644.1| putative lipoate-protein ligase A [Bacillus anthracis str. A0442]
gb|EDS95945.1| putative lipoate-protein ligase A [Bacillus anthracis str. A0389]
gb|EDT18583.1| putative lipoate-protein ligase A [Bacillus anthracis str. A0465]
gb|EDT67681.1| putative lipoate-protein ligase A [Bacillus anthracis str. A0174]
Length = 281
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 130/225 (57%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + + W T++LG+ D +LP+ E + + N + +
Sbjct: 27 ALQSFAMDDTLCTSIGKGESAATMRSWVHHNTIVLGIQDSRLPHLEEGISFLKENNFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQET-EKGIDIDLGYDTMWHLIQEMLKDYDVTIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSIRDQKFAGISQRRIRGGVAVQIYLCATGSGSERAALVRDFYNLAIQGEE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP+I P MA+LSELL+ TV +++ RL TL+Q LT
Sbjct: 206 TRFTYPEIVPSTMASLSELLDETITVQDLMMRLLKTLQQFAPKLT 250
>ref|YP_042676.1| lipoate-protein ligase A protein [Staphylococcus aureus subsp.
aureus MSSA476]
ref|YP_185520.1| lipoate-protein ligase A family protein [Staphylococcus aureus
subsp. aureus COL]
ref|YP_001331586.1| lipoate-protein ligase A protein [Staphylococcus aureus subsp.
aureus str. Newman]
ref|YP_001574487.1| lipoate--protein ligase A [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
ref|ZP_02760557.1| lipoate--protein ligase A [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
emb|CAG42323.1| lipoate-protein ligase A protein [Staphylococcus aureus subsp.
aureus MSSA476]
gb|AAW37744.1| lipoate-protein ligase A family protein [Staphylococcus aureus
subsp. aureus COL]
dbj|BAF66824.1| lipoate-protein ligase A protein [Staphylococcus aureus subsp.
aureus str. Newman]
gb|ABX28608.1| lipoate--protein ligase A [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
Length = 278
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 139/244 (56%), Gaps = 3/244 (1%)
Query: 31 LSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNN-GYVPV 89
+ F + + F +++ ++ + ++ W TVILG+ D +LP+ + + N GY +
Sbjct: 25 MQSFAFDDTFCESVGKDISDNVVRTWIHQHTVILGIHDSRLPFLKDGIDYLTNEIGYNAI 84
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGL VV D G+LN SL+ +I A+ +M +I + F + I+ EI+
Sbjct: 85 VRNSGGLGVVLDQGVLNISLMFKGQ--TETTIDEAFTVMYLLISKMFENENVDIDTMEIE 142
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
+SYCPG FDLSI G+KFAGI+QRR++ GI V IYL V G + R +++ FYE +GEV
Sbjct: 143 HSYCPGKFDLSIDGKKFAGISQRRVRGGIAVQIYLCVEGSGSERALMMQTFYEHALKGEV 202
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK YP+I+P CMA+L LL TV +V+ L ++ LG L Q +D
Sbjct: 203 TKFKYPEIEPSCMASLETLLNKTITVQDVMFLLLYAIKDLGGVLNMTPITQEEWQRYDTY 262
Query: 270 YERM 273
+++M
Sbjct: 263 FDKM 266
>ref|ZP_02169349.1| PAS/PAC sensor signal transduction histidine kinase [Bacillus
selenitireducens MLS10]
gb|EDP83671.1| PAS/PAC sensor signal transduction histidine kinase [Bacillus
selenitireducens MLS10]
Length = 277
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 137/254 (53%), Gaps = 7/254 (2%)
Query: 24 NKKVPG-ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIG 82
N + G A+ F + + NQ W TV+LG+ D +LP + +
Sbjct: 21 NPNISGSAMKAFAMDDTLCQIAGTSGNQGFARGWVHRPTVVLGIQDTRLPSVQDGIRFLR 80
Query: 83 NNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSE--SISISNAYLIMVDVIRESFSDYY 140
GY + RN GGLAVV D+G+ N SLV FSE +SI Y MVD+IR+ F +
Sbjct: 81 KQGYDVIARNSGGLAVVLDEGVYNLSLV----FSEEPGLSIDRGYAHMVDLIRQLFPEAG 136
Query: 141 QRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDF 200
+ IE EI SYCPG +DLSIA RKFAGI+QRRI+ GI V IYL+V G + R LI+DF
Sbjct: 137 KEIEDGEIATSYCPGRYDLSIADRKFAGISQRRIRGGIAVQIYLAVTGSGSERAALIRDF 196
Query: 201 YEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQ 260
Y T+G K + P I P+ MA+L EL+ P + EV R+ L G L+ D+
Sbjct: 197 YGIATKGGPVKFDVPHIQPDTMASLEELITGPVRINEVTRRVLGRLTHWGDELSHWEMDE 256
Query: 261 ALLTNFDAVYERMQ 274
+ ++ R+Q
Sbjct: 257 EAASLYETHLGRIQ 270
>ref|YP_086653.1| lipoate-protein ligase A [Bacillus cereus E33L]
gb|AAU15198.1| lipoate-protein ligase A [Bacillus cereus E33L]
Length = 281
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 129/225 (57%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + + W T++LG+ D +LP+ E + + N + +
Sbjct: 27 ALQSFAMDDTLCTSIGKGESAATMRSWVHHNTIVLGIQDSRLPHLEEGISFLKENNFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQET-EKGIDIDLGYDTMWHLIQEMLKDYDVTIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSIRDQKFAGISQRRIRGGVAVQIYLCATGSGSERAALVRDFYNLAIQGEE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP+I P MA+LSELL TV +++ RL TL+Q LT
Sbjct: 206 TRFTYPEIVPSTMASLSELLNETITVQDLMMRLLKTLQQFAPKLT 250
>ref|ZP_02524827.1| Lipoate-protein ligase A [Bacillus cereus AH1134]
Length = 281
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 128/225 (56%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + W T++LG+ D +LP+ E + + N + +
Sbjct: 27 ALQSFAMDDTLCTSIGNGKSAATMRSWVHHNTIVLGIQDSRLPHLEEGISFLKQNNFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQET-EKGIDIDLGYDTMWHLIKEMLKDYDVTIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSIRDQKFAGISQRRIRGGVAVQIYLCATGSGSERAALVRDFYNLAIQGEE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP+I P MA+LSELL TV +++ RL TL+Q LT
Sbjct: 206 TRFTYPEIVPSTMASLSELLGETITVQDLMMRLLKTLQQFAPKLT 250
>ref|ZP_02580693.1| Lipoate-protein ligase A [Bacillus cereus B4264]
Length = 281
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 128/225 (56%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + W T++LG+ D +LP+ E + + N + +
Sbjct: 27 ALQSFAMDDTLCTSIGNGKSAATMRSWVHHNTIVLGIQDSRLPHLEEGISFLKQNNFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQET-EKGIDIDLGYDTMWHLIKEMLKDYDVTIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSIRDQKFAGISQRRIRGGVAVQIYLCATGSGSERAALVRDFYNLAIQGEE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP+I P MA+LSELL TV +++ RL TL+Q LT
Sbjct: 206 TRFTYPEIVPSTMASLSELLGETITVQDLMMRLLKTLQQFAPKLT 250
>ref|ZP_02290512.1| hypothetical protein LmonocyFSL_19404 [Listeria monocytogenes FSL
J1-208]
Length = 255
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 132/219 (60%), Gaps = 1/219 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A+ F + +++ + W +TV LG+ D +LP + T + GY V
Sbjct: 27 AIQSFATDDTLCRSVGARMAPSTVRGWVHEKTVSLGIQDSKLPDIDKGITFLQERGYRVV 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D G+LN S+V+PD I+I Y M +I++ F D + IE EI+
Sbjct: 87 VRNSGGLAVVLDSGVLNLSMVLPDA-ERGIAIERGYETMFTLIKDMFVDCNEVIEAKEIE 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
+SYCPG++DLSI G+KFAGI+QRR+ KG+ V IYL++ G+Q AR +LI+DFY + +
Sbjct: 146 DSYCPGSYDLSIQGKKFAGISQRRMAKGVAVQIYLAIDGNQTARSELIRDFYTISGKDKQ 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQ 248
TK +P ++P+ M +LS+L++ ++ L RL +LR
Sbjct: 206 TKYTFPNVNPDVMGSLSDLMKNDVSLNGTLVRLFNSLRH 244
>ref|NP_981807.1| lipoate-protein ligase A, putative [Bacillus cereus ATCC 10987]
gb|AAS44415.1| lipoate-protein ligase A, putative [Bacillus cereus ATCC 10987]
Length = 281
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 128/225 (56%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + W T++LG+ D +LP+ E + + N + +
Sbjct: 27 ALQSFAMDDTLCTSIGNSQSATTMRSWVHHNTIVLGIQDSRLPHLEQGISFLKENNFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQET-EKGIDIDLGYDTMWHLIQEMLKDYDVTIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSIRDQKFAGISQRRIRGGVAVQIYLCATGSGSERATLVRDFYNLAIQGEE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP+I P MA+LSELL TV +++ RL TL+Q LT
Sbjct: 206 TRFTYPEIVPSTMASLSELLGETITVQDLMMRLLKTLQQFAPKLT 250
>ref|YP_897568.1| lipoate-protein ligase A [Bacillus thuringiensis str. Al Hakam]
ref|ZP_02591998.1| lipoate-protein ligase A [Bacillus cereus NVH0597-99]
ref|ZP_02603023.1| lipoate-protein ligase A [Bacillus cereus 03BB108]
gb|ABK88061.1| lipoate-protein ligase A [Bacillus thuringiensis str. Al Hakam]
Length = 281
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 129/225 (57%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + + W T++LG+ D +LP+ E + + N + +
Sbjct: 27 ALQSFAMDDTLCTSIGKGESAATMRSWVHHNTIVLGIQDSRLPHLEEGISFLKENNFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQET-EKGIDIDLGYDTMWHLIQEMLKDYDVTIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSIRDQKFAGISQRRIRGGVAVQIYLCATGSGSERATLVRDFYNLAIQGEE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP+I P MA+LSELL TV +++ RL TL+Q LT
Sbjct: 206 TRFTYPEIVPSTMASLSELLNETITVQDLMMRLLKTLQQFAPKLT 250
>ref|ZP_00738672.1| Lipoate-protein ligase A [Bacillus thuringiensis serovar
israelensis ATCC 35646]
ref|ZP_02587155.1| Lipoate-protein ligase A [Bacillus cereus G9842]
gb|EAO57082.1| Lipoate-protein ligase A [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 281
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 128/225 (56%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + W T++LG+ D +LP+ E + + N + +
Sbjct: 27 ALQSFAMDDTLCTSIGNGQSAATMRSWVHHNTIVLGIQDSRLPHLEEGISLLKKNNFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQET-EKGIDIDLGYDTMWHLIKEMLKDYDVTIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSIRDQKFAGISQRRIRGGVAVQIYLCATGSGSERAALVRDFYNLAIQGEE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP+I P MA+LSELL TV +++ RL TL+Q LT
Sbjct: 206 TRFTYPEIVPSTMASLSELLGETITVQDLMMRLLKTLQQFAPKLT 250
>ref|YP_001377086.1| biotin/lipoate A/B protein ligase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gb|ABS24091.1| biotin/lipoate A/B protein ligase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
Length = 281
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 127/225 (56%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + TI + + W T++LG+ D +LP+ + + + + +
Sbjct: 27 ALQSFAMDDTLCTTIGNGASASTMRSWVHHNTIVLGIQDSRLPHLQEGISFLKEQNFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQES-DKGIDIDLGYDTMWHLIKEMLKDYDVNIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL V G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSIHDQKFAGISQRRIRGGVAVQIYLCVTGSGSGRAALVRDFYNIAIQGEQ 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP I P MA+LSELL TV +++ RL TL+Q LT
Sbjct: 206 TRFTYPNIVPSTMASLSELLGETITVQDLMLRLLKTLQQFAQKLT 250
>ref|ZP_02256066.1| lipoate-protein ligase A [Bacillus cereus AH187]
ref|ZP_02596272.1| lipoate-protein ligase A [Bacillus cereus H3081.97]
Length = 281
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 129/225 (57%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + + W T++LG+ D +LP+ E + + N + +
Sbjct: 27 ALQSFAMDDTLCTSIGKGESAATMRSWVHHNTIVLGIQDSRLPHLEEGISFLKENDFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQET-EKGIDIDLGYDTMWHLIQEMLKDYDVTIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSIRDQKFAGISQRRIRGGVAVQIYLCATGSGSERAALVRDFYNLAIQGEE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP+I P MA+LSELL TV +++ RL TL+Q LT
Sbjct: 206 TRFTYPEIVPSTMASLSELLGETITVQDLMMRLLKTLQQFAPKLT 250
>ref|YP_001647952.1| biotin/lipoate A/B protein ligase [Bacillus weihenstephanensis
KBAB4]
gb|ABY46324.1| biotin/lipoate A/B protein ligase [Bacillus weihenstephanensis
KBAB4]
Length = 281
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 128/225 (56%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + W T++LG+ D +LP+ E + + N + +
Sbjct: 27 ALQSFAMDDTLCTSIGNGLSAATMRSWVHHNTIVLGIQDSRLPHLEEGISFLKENDFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQET-EKGIDIDLGYDTMWHLIKEMLKDYDVTIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSIRNQKFAGISQRRIRGGVAVQIYLCATGSGSERAALVRDFYNVAIQGEE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP+I P MA+LSELL TV +++ RL TL+Q LT
Sbjct: 206 TRFTYPEIVPSTMASLSELLGETITVQDLMMRLLKTLQQFTPKLT 250
>ref|YP_254318.1| hypothetical protein SH2403 [Staphylococcus haemolyticus JCSC1435]
dbj|BAE05712.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 280
Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 141/244 (57%), Gaps = 3/244 (1%)
Query: 31 LSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNN-GYVPV 89
+ F + + F +++ ++ + ++ W TVILG+ D +LP+ + + + GY +
Sbjct: 25 MQSFAFDDTFSESVGKDLSCNVVRTWIHQHTVILGIHDSRLPFLKDGIKYLTDEIGYNAI 84
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGL VV D G+LN SL+ +I A+ +M +I + F + I+ EI+
Sbjct: 85 VRNSGGLGVVLDQGVLNISLIFKGQ--TETTIDEAFTVMYLLICKMFENEDVEIDTREIE 142
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
+SYCPG FDLSI G+KFAGI+QRR++ GI V IYL V G + R ++++ FYE +GEV
Sbjct: 143 HSYCPGKFDLSIDGKKFAGISQRRVRGGIAVQIYLCVEGSGSERAEMMRVFYEHALKGEV 202
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK YP I PECMA+L L E V +V+ +L ++ LG +L + T ++
Sbjct: 203 TKFKYPDIHPECMASLETLFEREIKVQDVMFQLLHAIKDLGGNLNMDPITEDEWTRYEGY 262
Query: 270 YERM 273
+++M
Sbjct: 263 FDKM 266
>ref|NP_835047.1| Lipoate-protein ligase A [Bacillus cereus ATCC 14579]
gb|AAP12248.1| Lipoate-protein ligase A [Bacillus cereus ATCC 14579]
Length = 281
Score = 170 bits (431), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 128/225 (56%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + W T++LG+ D +LP+ E + + + + +
Sbjct: 27 ALQSFAMDDTLCTSIGNGKSAATMRSWVHHNTIVLGIQDSRLPHLEEGISFLKQHNFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQET-EKGIDIDLGYDTMWHLIKEMLKDYDVTIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSIRDQKFAGISQRRIRGGVAVQIYLCATGSGSERAALVRDFYNLAIQGEE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP+I P MA+LSELL TV +++ RL TL+Q LT
Sbjct: 206 TRFTYPEIVPSTMASLSELLGETITVQDLMMRLLKTLQQFAPKLT 250
>ref|ZP_00241029.1| lipoate-protein ligase A family protein [Bacillus cereus G9241]
gb|EAL11359.1| lipoate-protein ligase A family protein [Bacillus cereus G9241]
Length = 281
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 128/225 (56%), Gaps = 1/225 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + W T++LG+ D +LP+ E + + N + +
Sbjct: 27 ALQSFAMDDTLCTSIGNGRSAATMRSWVHHNTIVLGIQDSRLPHLEEGISFLKENNFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQET-EKGIDIDLGYDTMWHLIQEMLKDYDVTIEAKEII 145
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI +KFAGI+QRRI+ G+ V IYL G + R L++DFY QGE
Sbjct: 146 GSYCPGSYDLSIRDQKFAGISQRRIRGGVAVQIYLCATGSGSERAALVRDFYNLAIQGEE 205
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLT 254
T+ YP+I P MA+LSELL TV +++ RL T++Q LT
Sbjct: 206 TRFTYPEIVPSTMASLSELLGETITVQDLMMRLLKTMQQFAPKLT 250
>ref|NP_763915.1| hypothetical protein SE0360 [Staphylococcus epidermidis ATCC 12228]
gb|AAO03957.1|AE016745_56 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
Length = 279
Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 135/244 (55%), Gaps = 3/244 (1%)
Query: 31 LSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELA-KTEIGNNGYVPV 89
+ F + + F +++ ++ + ++ W TVILG+ D +LP+ + GY +
Sbjct: 25 MQSFAFDDTFSESVGKDLSCNVVRTWIHQHTVILGIHDSRLPFLSDGIRFLTDEQGYNAI 84
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGL VV D GILN SL+ +I A+ +M +I + F D I+ EI+
Sbjct: 85 VRNSGGLGVVLDQGILNISLIFKGQ--TETTIDEAFTVMYLLINKMFEDEDVSIDTKEIE 142
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG FDLSI +KFAGI+QRR++ GI V IYL + G + R +++ FY+ +GE
Sbjct: 143 QSYCPGKFDLSINDKKFAGISQRRVRGGIAVQIYLCIEGSGSERALMMQQFYQRALKGET 202
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK +YP IDP CMA+L LL V +V+ L L+ LG +L + T ++
Sbjct: 203 TKFHYPDIDPSCMASLETLLNREIKVQDVMFLLLYALKDLGANLNMDPITEDEWTRYEGY 262
Query: 270 YERM 273
Y++M
Sbjct: 263 YDKM 266
>ref|YP_001423042.1| YwfL [Bacillus amyloliquefaciens FZB42]
gb|ABS75811.1| YwfL [Bacillus amyloliquefaciens FZB42]
Length = 287
Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 141/251 (56%), Gaps = 11/251 (4%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A F + ++ + + W RT++LG+ D +LP+ E + + GY +
Sbjct: 28 AKQSFAMDDTLCASVGKGESPATARSWVHHRTIVLGIQDTRLPFLEDGVKLLEDEGYRVI 87
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ D + I I Y M +++R ++ IE +EIK
Sbjct: 88 VRNSGGLAVVLDEGVLNISLIFEDE-KKGIDIDRGYEAMTELVRRMLRPHHAEIEAYEIK 146
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAA--RGQLIKDFYEAGTQG 207
SYCPG++DLSI GRKFAGI+QRR++ G V IYL C D++ R LI+ FY+A +
Sbjct: 147 GSYCPGSYDLSIGGRKFAGISQRRLRGGTAVQIYL--CADKSGSERADLIRRFYQAALKD 204
Query: 208 EV--TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEK--SPDQALL 263
+ TK YP I PE MA+LSELL T TV +++ L L++L L SP++ ++
Sbjct: 205 KSNDTKGVYPDIRPETMASLSELLRTDITVQDLMLALLTELKELSGRLYAAGLSPEEEMV 264
Query: 264 --TNFDAVYER 272
N + ER
Sbjct: 265 FEKNLTRMLER 275
>ref|YP_187833.1| lipoate-protein ligase A family protein [Staphylococcus epidermidis
RP62A]
gb|AAW53632.1| lipoate-protein ligase A family protein [Staphylococcus epidermidis
RP62A]
Length = 279
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 135/244 (55%), Gaps = 3/244 (1%)
Query: 31 LSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELA-KTEIGNNGYVPV 89
+ F + + F +++ ++ + ++ W TVILG+ D +LP+ + GY +
Sbjct: 25 MQSFAFDDTFSESVGKDLSCNVVRTWIHQHTVILGIHDSRLPFLSDGIRFLTDEQGYNAI 84
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGL VV D GILN SL+ +I A+ +M +I + F D I+ EI+
Sbjct: 85 VRNSGGLGVVLDQGILNISLIFKGQ--TETTIDEAFTVMYLLISKMFEDEDVSIDTKEIE 142
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG FDLSI +KFAGI+QRR++ GI V IYL + G + R +++ FY+ +G+
Sbjct: 143 QSYCPGKFDLSINDKKFAGISQRRVRGGIAVQIYLCIEGSGSERALMMQQFYQRALKGQT 202
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAV 269
TK +YP IDP CMA+L LL V +V+ L L+ LG +L + T ++
Sbjct: 203 TKFHYPDIDPSCMASLETLLNREIKVQDVMFLLLYALKDLGANLNMDPITEDEWTRYEGY 262
Query: 270 YERM 273
Y++M
Sbjct: 263 YDKM 266
>ref|YP_177401.1| lipoate-protein ligase [Bacillus clausii KSM-K16]
dbj|BAD66440.1| lipoate-protein ligase [Bacillus clausii KSM-K16]
Length = 274
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 135/247 (54%), Gaps = 9/247 (3%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + + L T+ + Q + W T++LG D +LP+ A I GY V
Sbjct: 27 ALRSFAFDDT-LCTLAGKTGQSFIRFWVHENTIVLGTQDTRLPFIREAIEFIEQEGYRAV 85
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAV D GILN SLV P + SI Y MV +++ F + ++IE EI
Sbjct: 86 VRNSGGLAVCLDAGILNLSLVFPGE--ATFSIDEGYERMVTLVKAIFKE--EQIEAGEIA 141
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEV 209
SYCPG++DLSI G+KFAGI+QRRI+ GI V IYL V G +AR I+ Y Q
Sbjct: 142 GSYCPGSYDLSIDGKKFAGISQRRIRGGIAVQIYLCVQGSGSARAAFIRSVYNKAVQTSK 201
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEK--SPDQALL--TN 265
+YP I PE MA+LSEL P+++ ++ R + + + G L SP++ LL T
Sbjct: 202 PAFSYPDIKPEVMASLSELTNVPYSIETIIGRAKTAILESGGQLESAVLSPEEELLYETQ 261
Query: 266 FDAVYER 272
+ V +R
Sbjct: 262 LERVIDR 268
>ref|ZP_02321256.1| biotin/lipoate A/B protein ligase family protein [Listeria
monocytogenes FSL J2-064]
Length = 206
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 117/189 (61%), Gaps = 1/189 (0%)
Query: 85 GYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIE 144
GY V RN GGLAVV D G+LN S+V+PD I+I Y M +I++ F D + IE
Sbjct: 10 GYRVVVRNSGGLAVVLDSGVLNLSMVLPDA-ERGIAIERGYETMFTLIKDMFVDCNEVIE 68
Query: 145 YHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAG 204
EI++SYCPG++DLSI G+KFAGI+QRR+ KG+ V IYL++ GDQ R +LI+DFY
Sbjct: 69 AKEIEDSYCPGSYDLSIQGKKFAGISQRRMAKGVAVQIYLAIDGDQTTRSELIRDFYTIS 128
Query: 205 TQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLT 264
+ + TK +P ++P M +LS+L++ ++ L RL +LR L + L
Sbjct: 129 GKAKQTKYTFPDVNPNVMGSLSDLMKNDISLNGTLVRLFNSLRHYAGELVSGTLTSEELD 188
Query: 265 NFDAVYERM 273
F A YER+
Sbjct: 189 LFPAYYERL 197
>ref|NP_784264.1| hypothetical protein lp_0477 [Lactobacillus plantarum WCFS1]
emb|CAD63103.1| unknown [Lactobacillus plantarum WCFS1]
Length = 310
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 131/239 (54%), Gaps = 10/239 (4%)
Query: 23 GNKKVPGA-LSPFVWTE--VFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKT 79
K P A L F +T ++L Q+P I+H W + TVILG+LD++LP
Sbjct: 51 SQKYEPAAMLDSFAYTNALLWLTAARQQP---IVHFWQLQPTVILGLLDQRLPRLTAGLA 107
Query: 80 EIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDY 139
++ GY + RN GGLAVVAD G+LN SL +P E I+ AY +MVD ++ +
Sbjct: 108 DLHAAGYQIMLRNSGGLAVVADPGVLNVSLFLPA-TRERYPITAAYQLMVDYVQAVWPQL 166
Query: 140 YQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKD 199
I EI SYCPG++DLSIAGRK AG++QRR + +V+ +Y+SV GDQ AR QLI+
Sbjct: 167 --NITTGEITRSYCPGDYDLSIAGRKIAGMSQRRTAEALVIMLYVSVDGDQMARSQLIQR 224
Query: 200 FYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSP 258
FY+ G +P +DP+ M T+++ L P R L Q G T P
Sbjct: 225 FYQVSLAGH-HDARFPDVDPQVMTTVADALAAPTDTTATQARFIAILAQHGTVDTTSLP 282
>ref|NP_391644.1| hypothetical protein BSU37640 [Bacillus subtilis subsp. subtilis
str. 168]
sp|P39648|YWFL_BACSU Uncharacterized protein ywfL
emb|CAA51646.1| ipa-90d [Bacillus subtilis]
emb|CAB15791.1| ywfL [Bacillus subtilis subsp. subtilis str. 168]
Length = 281
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 132/228 (57%), Gaps = 7/228 (3%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A F + ++ + + W T++LG+ D +LP+ + + + + GY +
Sbjct: 28 AKQSFAMDDTLCMSVGKGVSPATARSWVHHDTIVLGIQDTRLPFLQDGISLLESEGYRVI 87
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV DDG+LN SL+ D + I I Y MV+++R Y +IE +EI+
Sbjct: 88 VRNSGGLAVVLDDGVLNISLIFEDE-KKGIDIDKGYEAMVELMRRMLRPYNAKIEAYEIE 146
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAA--RGQLIKDFYEAGTQG 207
SYCPG++DLSI G+KFAGI+QRR++ G+ V IYL C D++ R LI+ FY+A +
Sbjct: 147 GSYCPGSYDLSINGKKFAGISQRRVRGGVAVQIYL--CADKSGSERADLIRRFYQAALKD 204
Query: 208 EVT--KVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSL 253
+ K YP+I PE MA+LSELL+ +V +++ L L+ L L
Sbjct: 205 KQNDKKGVYPEIRPETMASLSELLQKDISVQDLMFALLTELKALSTHL 252
>ref|YP_807740.1| Lipoate-protein ligase A [Lactobacillus casei ATCC 334]
gb|ABJ71298.1| Lipoate-protein ligase A [Lactobacillus casei ATCC 334]
Length = 282
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 34 FVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNI 93
F T L P L+LH W +TVILGM D +LP + ++GY RN
Sbjct: 27 FAHTNALLAHPELHP-PLMLHFWTADQTVILGMQDLKLPQLGHGLRVLASDGYGFFVRNS 85
Query: 94 GGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYC 153
GGLAV+AD G+LN SL +P+ + +SI++AY +M + R +F I EI +SYC
Sbjct: 86 GGLAVIADRGVLNVSLFLPN--EDELSINSAYELMTQLFRTAFPSL--PIATTEIVHSYC 141
Query: 154 PGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVN 213
PG +DLS+ G+KFAG+AQRR + GIVV +Y S+ G+Q AR L++ FY G +
Sbjct: 142 PGKYDLSVRGQKFAGMAQRRNRAGIVVMLYCSIFGNQDARCALLRRFYHEGKAAASSHFT 201
Query: 214 YPQIDPECMATLSELLETPFTVAEV 238
+P I E M TLS+LL P T+ +
Sbjct: 202 FPVIRSETMTTLSDLLGRPLTLEQA 226
>ref|YP_081064.1| conserved protein YwfL [Bacillus licheniformis ATCC 14580]
ref|YP_093494.1| YwfL [Bacillus licheniformis ATCC 14580]
gb|AAU25426.1| conserved protein YwfL [Bacillus licheniformis ATCC 14580]
gb|AAU42801.1| YwfL [Bacillus licheniformis DSM 13]
Length = 281
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 119/212 (56%), Gaps = 7/212 (3%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
A F + ++ + + W T++LG+ D +LPY + + + GY +
Sbjct: 28 AKQSFAIDDTLCASVGKGLSPATARSWVHHDTIVLGIQDTRLPYLQEGISLLEEAGYQAI 87
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D G+LN SL+ D I I Y M ++++ S Y IE +EIK
Sbjct: 88 VRNSGGLAVVLDSGVLNVSLIFQDK-KNGIDIDRGYEAMFELVKRMLSSYDAAIEAYEIK 146
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQ--AARGQLIKDFYEAGTQG 207
SYCPG+FDLSI GRKFAGI+QRR++ G+ V IYL C DQ + R +LIK FY+ +
Sbjct: 147 GSYCPGSFDLSIGGRKFAGISQRRLRGGVAVQIYL--CADQSGSGRAELIKRFYDTALKD 204
Query: 208 --EVTKVNYPQIDPECMATLSELLETPFTVAE 237
TK YP I PE MA+LSELL +V +
Sbjct: 205 MRGKTKAVYPDIRPETMASLSELLNEDISVQD 236
>ref|YP_001488612.1| lipoate--protein ligase [Bacillus pumilus SAFR-032]
gb|ABV64052.1| lipoate--protein ligase [Bacillus pumilus SAFR-032]
Length = 281
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 113/205 (55%), Gaps = 3/205 (1%)
Query: 34 FVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNI 93
F + ++ + + W T++LG+ D +LP+ + + GY + RN
Sbjct: 32 FAMDDTLCASVGKGLSPATARSWVHHNTIVLGIQDTRLPFLQDGVKLLEEEGYRVIVRNS 91
Query: 94 GGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYC 153
GGLAVV D+G+LN SL+ + + I I Y MV+++ S Y IE +EI SYC
Sbjct: 92 GGLAVVLDEGVLNVSLIFAEQ-KKGIDIDRGYDAMVELVCRMLSKYEVDIEAYEIVGSYC 150
Query: 154 PGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQG--EVTK 211
PG++DLSI G+KFAGI+QRR++ G+ V IYL G R LI+ FY+A + E K
Sbjct: 151 PGSYDLSINGKKFAGISQRRLRGGVAVQIYLCADGSGRERADLIRRFYDAALKDKREEVK 210
Query: 212 VNYPQIDPECMATLSELLETPFTVA 236
+P I P+ MA+LSEL P A
Sbjct: 211 AVFPDIQPDTMASLSELTGEPIDCA 235
>ref|ZP_02327322.1| hypothetical protein Plarl_06700 [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 256
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 108/199 (54%), Gaps = 3/199 (1%)
Query: 31 LSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVT 90
L+PF E+ +K + +I HIW R ++G+ D +LP+ + AK E+ G+
Sbjct: 25 LTPFALEELMMKEVGLTGKAMI-HIWRHPRAFVMGLRDSKLPFAKEAKQELEGKGFQTAV 83
Query: 91 RNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKN 150
RN GG AV D G++N ++++P +I + + M +IR++ + + + E+
Sbjct: 84 RNSGGAAVPLDLGVVNITIMLPKP-QGAIDFHDDFERMFLLIRDALAAHSSEVAKGEVTG 142
Query: 151 SYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVT 210
S+CPG++DLSI GRKF GIAQRR K + V + V G + L + FY+ G T
Sbjct: 143 SFCPGDYDLSIGGRKFCGIAQRRQSKALAVQAFNIVEGTGGDKAALARAFYDKAAAGADT 202
Query: 211 KVNYPQIDPECMATLSELL 229
YP + + MA+LS+ L
Sbjct: 203 GA-YPLVALDQMASLSDCL 220
>ref|ZP_01724803.1| lipoate-protein ligase A [Bacillus sp. B14905]
gb|EAZ84747.1| lipoate-protein ligase A [Bacillus sp. B14905]
Length = 154
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 90/138 (65%)
Query: 136 FSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQ 195
F + ++IE +EI SYCPG++DLSI G+KFAGI+QRR+++G+ V IYL + G + R
Sbjct: 5 FPEVAEKIEAYEIVGSYCPGSYDLSIEGKKFAGISQRRLRQGVAVQIYLCIEGSGSQRAA 64
Query: 196 LIKDFYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTE 255
LI+DFYE Q E TK YPQI PE MA+LSEL++ TV V+ RL+ L LG ++
Sbjct: 65 LIRDFYEESLQQEETKFTYPQIVPEVMASLSELVDPHLTVEAVVIRLQQYLHHLGGNVHP 124
Query: 256 KSPDQALLTNFDAVYERM 273
+S LT + +R+
Sbjct: 125 ESFHDEELTLYGFYLKRV 142
>ref|ZP_02847882.1| Lipoate-protein ligase A-like protein [Paenibacillus sp. JDR-2]
gb|EDS52584.1| Lipoate-protein ligase A-like protein [Paenibacillus sp. JDR-2]
Length = 277
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 1/177 (0%)
Query: 52 ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
+ H+W R I+G+ D +LP A+ + G+ RN GG AV D G++N SL++
Sbjct: 49 VCHLWRHPRAFIMGLRDSRLPSAGAARDLLETAGWDTAVRNSGGAAVPLDTGVVNLSLIL 108
Query: 112 PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQ 171
P + + M ++IR + ++++ EI +YCPG+FDLSI G KF GIAQ
Sbjct: 109 PKSDVLDFHFHDNFEQMYELIRLALQASGRQVDKGEIGGAYCPGDFDLSIGGYKFCGIAQ 168
Query: 172 RRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSEL 228
RR +++ ++ G A R +L++ FY+ ++P + + A+L EL
Sbjct: 169 RRQVNAVIIQAFIVAEGSGAERARLVRSFYDI-AAAGADAADFPVVTADSTASLEEL 224
>dbj|BAB88975.1| hypothetical protein [Bacillus cereus]
Length = 174
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + W T++LG+ D +LP+ E + + N + +
Sbjct: 12 ALQSFAMDDTLCTSIGNGKSAATMRSWVHHNTIVLGIQDSRLPHLEEGISFLKQNNFNVI 71
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 72 VRNSGGLAVVLDEGVLNVSLLFQE-TEKGIDIDLGYDTMWHLIKEMLKDYDVTIEAKEIV 130
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSV 186
SYCPG++DLSI +KFAGI+QRRI +G +S +S
Sbjct: 131 GSYCPGSYDLSIRDQKFAGISQRRIPEGGRLSKSISC 167
>ref|ZP_02612050.1| lipoate-protein ligase A [Bacillus anthracis Tsiankovskii-I]
Length = 165
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Query: 30 ALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPV 89
AL F + +I + + + W T++LG+ D +LP+ E + + N + +
Sbjct: 27 ALQSFAMDDTLCTSIGKGESAATMRSWVHHNTIVLGIQDSRLPHLEEGISFLKENNFNVI 86
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
RN GGLAVV D+G+LN SL+ + + I I Y M +I+E DY IE EI
Sbjct: 87 VRNSGGLAVVLDEGVLNVSLLFQE-TEKGIDIDLGYDTMWHLIQEMLKDYDVTIEAKEIV 145
Query: 150 NSYCPGNFDLSIAGRKFAGI 169
SYCPG++DLSI +KFAGI
Sbjct: 146 GSYCPGSYDLSIRDQKFAGI 165
>ref|ZP_01165794.1| hypothetical protein MED92_10289 [Oceanospirillum sp. MED92]
gb|EAR62087.1| hypothetical protein MED92_10289 [Oceanospirillum sp. MED92]
Length = 253
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 40 FLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVV 99
LK + I +W T+ +++ + + P+F+ A + + G+ + RN GG +V
Sbjct: 36 LLKEVASGKRSPIFRVWETTQCLVVTGKETRFPHFDKAAAILADEGWPVIVRNSGGTSVP 95
Query: 100 ADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDL 159
GILN S++ P H S+ S+ + Y+ + + I+ + +++Y E SYC G F+L
Sbjct: 96 LHPGILNLSMIFPQHASDPYSLDDIYMALCEPIKLALESVGLKVDYGETPGSYCDGRFNL 155
Query: 160 SIAGRKFAGIAQ---------RRIKKGIVVSIYLSVCGDQAARGQLIKDFYE-AGTQGEV 209
+I G K G AQ + IK+ ++ L V D A+ + FY+ AG
Sbjct: 156 NIGGLKVTGTAQKLMVSPPNSKGIKQAVLAQAMLMVEADAASGTGWVNRFYQLAG----- 210
Query: 210 TKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTL 246
N Q DP ++ + + E+ +LR L
Sbjct: 211 ---NDRQFDPLVATSIYDCIGKNTEHGELTTQLRKAL 244
>ref|YP_855813.1| biotin/lipoate A/B protein ligase family [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gb|ABK36117.1| biotin/lipoate A/B protein ligase family [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 233
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Query: 54 HIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPD 113
H+W + +I+ D +LP ++ A ++ G+ R+ GG AV GILN SL++P
Sbjct: 38 HLWQAPQCLIVTRKDARLPRYQAACEQLAAEGWPVHVRDSGGTAVPHGAGILNLSLMLP- 96
Query: 114 HFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRR 173
+ +++ Y ++ + +Y Y + S+C G ++L I GRK G AQR
Sbjct: 97 --RTTTDLAHYYRLLGAPLLSLLGEYGLAGSYDFVPGSFCDGQYNLVIGGRKVTGTAQRW 154
Query: 174 IKKG------IVVSIYLSVCG--DQAARGQLIKDFYE-AGTQGEVTKVNYPQIDPECMAT 224
+ G ++ L V G DQ R + FYE AG GE+ + P T
Sbjct: 155 LAPGQDHQGAVLAQAMLLVAGNVDQGTR--MASRFYELAG--GEL------RFLPATSTT 204
Query: 225 LSELLETPFTVAEVLERLRLTLRQL 249
+++ + + E++ER+R L L
Sbjct: 205 ITQAINWQGSEGELVERVRTRLTAL 229
>ref|YP_001141113.1| biotin/lipoate A/B protein ligase family [Aeromonas salmonicida
subsp. salmonicida A449]
gb|ABO89365.1| biotin/lipoate A/B protein ligase family [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 233
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Query: 49 NQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFS 108
Q H+W + +I+ D +LP ++ A ++ G+ R+ GG AV GILN S
Sbjct: 33 GQARAHLWQAPQCLIVTRKDTRLPRYQAACEQLAREGWPVHVRDSGGTAVPHGAGILNLS 92
Query: 109 LVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAG 168
L++P + + + Y ++ + +D+ Y + S+C G ++L I RK G
Sbjct: 93 LLLP---RTTTDLGHYYRLLGAPLLTLLADHGLSGGYDFVPGSFCDGQYNLVIGDRKITG 149
Query: 169 IAQRRIKKG------IVVSIYLSVCGDQAARGQLIKDFYE 202
AQR + G ++ L V GD ++ FYE
Sbjct: 150 TAQRWLAPGQDHNGAVLAQAMLLVAGDVDEGTRMASRFYE 189
>ref|NP_936527.1| lipoate-protein ligase A [Vibrio vulnificus YJ016]
dbj|BAC96497.1| lipoate-protein ligase A [Vibrio vulnificus YJ016]
Length = 241
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 34 FVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNI 93
F E +K + +L +W + ++ + P E +TE+ G+ R
Sbjct: 25 FQREEALIKQVQAGELDQVLLLWQVKHPTLVLPAGNKWPQTEHLRTELAKLGWKLAARKT 84
Query: 94 GGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYC 153
GG V GI+N S + ++ I +AYL + D + F Y + H SYC
Sbjct: 85 GGAPVPQVPGIINLSHLYHWPQDQAYDIRSAYLKLCDTLHGFFQQYGLEADVHATPGSYC 144
Query: 154 PGNFDLSIAGRKFAGIAQRRIKK 176
G+++L+I G+K G AQR + K
Sbjct: 145 DGDYNLNITGQKIVGTAQRVLLK 167
>ref|YP_269748.1| hypothetical protein CPS_3049 [Colwellia psychrerythraea 34H]
gb|AAZ26891.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 234
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 44 INQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDG 103
I+Q P LI P+ ++L ++ L +L T + G+ R GG V G
Sbjct: 21 IDQTPRFLIWE--PVENVMVLPASNKWLATPQLT-THMAKLGWQIEQRKTGGSPVPQAPG 77
Query: 104 ILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAG 163
+ N S+V P S + +Y +++D++ S+Y E E+K +YC G F+LSI
Sbjct: 78 VFNLSMVYPWPNEVEFSTTKSYQLLIDILELWLSNYGVSAETGEVKGAYCNGAFNLSINN 137
Query: 164 RKFAGIAQRRIKKGIVVS 181
+KF G AQ+ + V S
Sbjct: 138 KKFIGTAQKMRRTSAVNS 155
>ref|ZP_02195173.1| hypothetical protein AND4_10414 [Vibrio campbellii AND4]
gb|EDP59563.1| hypothetical protein AND4_10414 [Vibrio campbellii AND4]
Length = 236
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 52 ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
+L +W + ++ ++ P ++ + + + + +R GG V GI+N S +
Sbjct: 37 VLLLWQVKSPTLVLPAGKKWPISDVLEQALEDKNWKLFSRKTGGAPVPQVPGIINLSHIY 96
Query: 112 PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQ 171
++ I AYL + DV+ F +++ H NSYC G+++L+I G+K G AQ
Sbjct: 97 HWPENQPYDIKKAYLDLCDVLTSFFEQLGVKVDVHATPNSYCDGDYNLNIGGQKVVGTAQ 156
Query: 172 R-RIKKG 177
R +KKG
Sbjct: 157 RVLLKKG 163
>ref|NP_763527.1| Lipoate-protein ligase A [Vibrio vulnificus CMCP6]
gb|AAO08517.1|AE016813_269 Lipoate-protein ligase A [Vibrio vulnificus CMCP6]
Length = 241
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%)
Query: 34 FVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNI 93
F E +K + +L +W + ++ + P E + E+ G+ R
Sbjct: 25 FQREEALIKQVQAGELDQVLLLWQVKHPTLVLPAGNKWPQTEHLRAELAKLGWKLTARKT 84
Query: 94 GGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYC 153
GG V GI+N S + ++ I +AYL + + + F Y + H SYC
Sbjct: 85 GGAPVPQVPGIINLSHLYHWPQDQAYDIRSAYLKLCETLCGFFQQYGLEADVHATPGSYC 144
Query: 154 PGNFDLSIAGRKFAGIAQRRIKK 176
G+++L+IAG+K G AQR + K
Sbjct: 145 DGDYNLNIAGQKIVGTAQRVLLK 167
>ref|YP_272973.1| hypothetical protein PSPPH_0675 [Pseudomonas syringae pv.
phaseolicola 1448A]
gb|AAZ37159.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 231
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 12/202 (5%)
Query: 53 LHIW-PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
L W P R +++ +LP F A + +NG+ + R GG V +N +LV
Sbjct: 33 LLFWRPTDRALVMPRRMSRLPGFVEASETLADNGWPVLLRETGGEPVPQSSATVNIALVY 92
Query: 112 --PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGI 169
P + I AYL + + + + + E+ ++C G F++++ GRK G
Sbjct: 93 AQPAADVDRDRIETAYLRLCQPLLDLLVELGGQASLGEVAGAFCDGRFNVNLDGRKMVGT 152
Query: 170 AQR-RIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVN-YPQIDPECMATLSE 227
AQR R +G + L A G L+ D G V + N +++P A
Sbjct: 153 AQRWRQSQGGTRPVVL-------AHGALLLDDERVQMAGAVNRFNELCELEPRIRAESHV 205
Query: 228 LLETPFTVAEVLERLRLTLRQL 249
L F +VL RL RQL
Sbjct: 206 ALHEVFPDVDVLPRLAQAYRQL 227
>ref|ZP_02015020.1| conserved hypothetical protein [Halorubrum lacusprofundi ATCC
49239]
gb|EDN50457.1| conserved hypothetical protein [Halorubrum lacusprofundi ATCC
49239]
Length = 237
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 14/193 (7%)
Query: 53 LHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIP 112
+ +W R V G D + P F AK G+ P+ R++GG AV L F+ +P
Sbjct: 32 VRVWTPPRQVAFGRRDAREPGFGRAKRLAAERGFEPIERDVGGRAVAYPGDTLAFAHALP 91
Query: 113 DHFSESI-SISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIA-GRKFAGIA 170
SI + Y ++ + + + E S+CPG+ + +A G K AGIA
Sbjct: 92 LVDGRGFESIPDRYERAIETVIRALRSLGAEVSTGEPPESFCPGDHSIRVAGGGKVAGIA 151
Query: 171 QR-RIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYPQIDPECMATLSEL- 228
QR R +V + D +A Y+A + P DPE + +++E
Sbjct: 152 QRVRGDAALVAGCLVVTRADASAVADATAAVYDA--------LGVP-FDPETVGSVAEAN 202
Query: 229 -LETPFTVAEVLE 240
E P VA LE
Sbjct: 203 GPEDPKPVARALE 215
>ref|YP_237646.1| hypothetical protein Psyr_4578 [Pseudomonas syringae pv. syringae
B728a]
gb|AAY39608.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
B728a]
Length = 231
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 12/202 (5%)
Query: 53 LHIW-PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
L W P R +++ +L F A + +N + + R GG V LN +L+
Sbjct: 33 LLFWRPNDRALVMPRRMSRLAGFAEASETLSDNAWPVLLRETGGEPVPQSSATLNIALIY 92
Query: 112 --PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGI 169
P + I AYL + I + +D + E+ ++C G F++++ GRK G
Sbjct: 93 AQPPTDVDRDRIETAYLRLCQPILDLMTDLGGQASLGEVAGAFCDGRFNVNLNGRKMVGT 152
Query: 170 AQR-RIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVN-YPQIDPECMATLSE 227
AQR R +G + L A G L+ D V + N +++P A
Sbjct: 153 AQRWRQSQGGRRPVVL-------AHGALLLDNERVQMAAAVNRFNELCELEPRVQAGSHI 205
Query: 228 LLETPFTVAEVLERLRLTLRQL 249
L F A+VLERL R+L
Sbjct: 206 ALYEAFPGADVLERLAQAYRKL 227
>ref|NP_790442.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
gb|AAO54137.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 231
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 12/202 (5%)
Query: 53 LHIW-PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
L +W P R +++ +LP F A + +N + + R GG V +N +LV
Sbjct: 33 LLLWRPSDRALVMPRRMSRLPGFTEASETLADNRWPVLLRETGGEPVPQSCATVNIALVY 92
Query: 112 --PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGI 169
P ++ I AYL + I + + + E+ ++C G F++++ GRK G
Sbjct: 93 AQPPADTDRDRIETAYLRLCQPILDLLIELGGKASLGEVAGAFCDGRFNVNLEGRKMVGT 152
Query: 170 AQR-RIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVN-YPQIDPECMATLSE 227
AQR R +G + L A G L+ D V + N ++D A
Sbjct: 153 AQRWRQSQGGTRPVVL-------AHGALLLDDERVPMVAAVNRFNELCELDQRVRADSHI 205
Query: 228 LLETPFTVAEVLERLRLTLRQL 249
L F A+VLERL R+L
Sbjct: 206 ALHEAFPDAQVLERLAQAYRRL 227
>ref|ZP_02840113.1| conserved hypothetical protein [Arthrobacter chlorophenolicus A6]
gb|EDS60041.1| conserved hypothetical protein [Arthrobacter chlorophenolicus A6]
Length = 247
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 71/163 (43%), Gaps = 20/163 (12%)
Query: 53 LHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIP 112
L ++ TV G D +LP FE A +NG+ P+ R GG A G L + P
Sbjct: 44 LRLYRPAPTVAFGQRDTRLPGFEAAAQACRDNGFEPLVRRAGGRAAAYHQGTLVVDHIEP 103
Query: 113 DHFSESISISNAYLIMVDVIRESFSDYYQRIEYH----EIKNSYCPGNFDLSIAGR---- 164
D ++I+ S + E F+D +R+ H EI YCPG F S+ G
Sbjct: 104 D--DDAIAGSKSRF---GYFGELFADALRRVGVHAAVGEIPGEYCPGEF--SVHGTAAAD 156
Query: 165 ----KFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEA 203
K G AQR + G + S + V D A +++ D Y A
Sbjct: 157 GSRIKLVGTAQRVVAGGWLFSSVI-VVEDSAPIRKVLTDSYAA 198
>ref|ZP_01811703.1| hypothetical protein VSWAT3_13622 [Vibrionales bacterium SWAT-3]
gb|EDK31115.1| hypothetical protein VSWAT3_13622 [Vibrionales bacterium SWAT-3]
Length = 233
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 38 EVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLA 97
E+ + N E Q ++ +W ++ ++ P ++ ++ G+ +R GG
Sbjct: 24 ELLQQIQNGEIGQALM-LWQAKTPTLVLPAGKKWPVTLESRKQLEAQGWQLSSRKTGGAP 82
Query: 98 VVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNF 157
V G++N S + E+ +I AYL + DV+ + F + +E H SYC G++
Sbjct: 83 VPQLPGVINLSHIYHWPSDEAYNIQKAYLHLCDVLTQFFKELGVDVEVHATPGSYCDGDY 142
Query: 158 DLSIAGRKFAGIAQRRIKK 176
+L+I +K G AQR + K
Sbjct: 143 NLNINKQKIVGTAQRVLLK 161
>ref|YP_262679.1| hypothetical protein PFL_5620 [Pseudomonas fluorescens Pf-5]
gb|AAY94813.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 247
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 80/202 (39%), Gaps = 12/202 (5%)
Query: 53 LHIW-PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
L W P R +++ +LP FE A E NG+ + R GG V +N +LV
Sbjct: 46 LLFWQPSDRALVMPRRLSRLPGFERACEESAANGWPVLLRETGGEPVPQSAATVNIALVY 105
Query: 112 --PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGI 169
P + I AY + I + S+ E++ ++C G F++++ GRK G
Sbjct: 106 APPRSEGDQGRIETAYRRLCQPICDLLSELGGNPSLGEVEGAFCDGRFNVNLDGRKMVGT 165
Query: 170 AQR-RIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYP-QIDPECMATLSE 227
AQR R KG + L G L+ D V N ++ C A
Sbjct: 166 AQRWRQSKGGQRPVGL-------VHGALLLDNERDSMVNAVNTFNQACGLEQRCRAESHI 218
Query: 228 LLETPFTVAEVLERLRLTLRQL 249
L F + L RL RQ+
Sbjct: 219 ALHEAFAAPDALVRLESLYRQM 240
>ref|ZP_01897380.1| hypothetical protein PE36_21004 [Moritella sp. PE36]
gb|EDM68200.1| hypothetical protein PE36_21004 [Moritella sp. PE36]
Length = 240
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 40 FLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVV 99
F+ I Q+ L +W ++ + P K + + ++R GG V
Sbjct: 26 FIAQIKQDELSQCLMLWQAKTPTLVLPAGNKWPESNTLKQALAEQSWQVLSRRTGGAPVP 85
Query: 100 ADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDL 159
GI+N S + S + AY+ + V+ + FS Y SYC G+++L
Sbjct: 86 QSPGIVNLSHIYLWPEKTPYSTATAYVHLCTVLNDFFSQYGLESSAAATPFSYCDGDYNL 145
Query: 160 SIAGRKFAGIAQRRI-KKG 177
+I GRK G AQR I KKG
Sbjct: 146 NINGRKIVGTAQRVILKKG 164
>ref|ZP_01259349.1| hypothetical protein V12G01_02345 [Vibrio alginolyticus 12G01]
gb|EAS77263.1| hypothetical protein V12G01_02345 [Vibrio alginolyticus 12G01]
Length = 236
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 47 EPNQL--ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGI 104
+ NQL +L +W + ++ ++ P + + +G+ +R GG V GI
Sbjct: 30 QSNQLSQVLLLWQVKSPTLVLPAGKKWPVSNELEHALNTSGWKLFSRKTGGAPVPQVPGI 89
Query: 105 LNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR 164
+N S + E +I AYL + ++ F +++ H SYC G ++L+I G+
Sbjct: 90 INLSHIYHWPEGEPYNIKKAYLDLCAILTVFFKQLGVKVDVHATPYSYCDGEYNLNIGGQ 149
Query: 165 KFAGIAQR-RIKKG 177
K G AQR +KKG
Sbjct: 150 KVVGTAQRVLLKKG 163
>ref|NP_799905.1| hypothetical protein VPA0395 [Vibrio parahaemolyticus RIMD 2210633]
ref|ZP_01990089.1| lipoate-protein ligase A [Vibrio parahaemolyticus AQ3810]
dbj|BAC61738.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gb|EDM60007.1| lipoate-protein ligase A [Vibrio parahaemolyticus AQ3810]
Length = 236
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 47 EPNQL--ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGI 104
+ NQL +L +W + ++ ++ P + + +G+ +R GG V GI
Sbjct: 30 QSNQLSQVLLLWQVKSPTLVLPAGKKWPVSNELEHALNTSGWKLFSRKTGGAPVPQVPGI 89
Query: 105 LNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR 164
+N S + E I AYL + ++ F +++ H SYC G ++L+I G+
Sbjct: 90 INLSHIYHWPEGEPYDIKKAYLDLCAILTVFFKQLGVKVDVHATPYSYCDGEYNLNIGGQ 149
Query: 165 KFAGIAQR-RIKKG 177
K G AQR +KKG
Sbjct: 150 KVVGTAQRVLLKKG 163
>ref|ZP_01477153.1| hypothetical protein VEx2w_02000357 [Vibrio sp. Ex25]
gb|EDN58433.1| hypothetical protein VEx25_A0263 [Vibrio sp. Ex25]
Length = 236
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 47 EPNQL--ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGI 104
+ NQL +L +W + ++ ++ P + + +G+ +R GG V GI
Sbjct: 30 QSNQLSQVLLLWQVKSPTLVLPAGKKWPISNELEHALNASGWKLFSRKTGGAPVPQVPGI 89
Query: 105 LNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR 164
+N S + E I AYL + ++ F +I+ H SYC G ++L+I G+
Sbjct: 90 INLSHIYHWPDGEPYDIKKAYLDLCAILTVFFEQLGVKIDVHATPYSYCDGEYNLNIGGQ 149
Query: 165 KFAGIAQR-RIKKG 177
K G AQR +KKG
Sbjct: 150 KVVGTAQRVLLKKG 163
>ref|ZP_01063047.1| hypothetical protein MED222_09898 [Vibrio sp. MED222]
gb|EAQ55726.1| hypothetical protein MED222_09898 [Vibrio sp. MED222]
Length = 233
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 53 LHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIP 112
L +W ++ ++ P ++ ++ G+ +R GG V GI+N S +
Sbjct: 38 LMLWQAKTPTLVLPAGKKWPVTLESRKQLAAQGWQLTSRKTGGAPVPQLPGIINLSHIYH 97
Query: 113 DHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQR 172
E+ +I AYL + +V+ F + ++ H SYC G+++L+I +K G AQR
Sbjct: 98 WPRDEAYNIQKAYLHLCNVLTLFFKELGVDVDVHATPGSYCDGDYNLNINKQKIVGTAQR 157
Query: 173 RIKK 176
+ K
Sbjct: 158 VLLK 161
>ref|YP_001448596.1| hypothetical protein VIBHAR_06478 [Vibrio harveyi ATCC BAA-1116]
gb|ABU74369.1| hypothetical protein VIBHAR_06478 [Vibrio harveyi ATCC BAA-1116]
Length = 236
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 40 FLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVV 99
+K + + +L +W + ++ ++ P + + + + + +R GG V
Sbjct: 25 LIKLVQTDQLSQVLLLWQVKSPTLVLPAGKKWPISDELEQGLEDTNWKLFSRKTGGAPVP 84
Query: 100 ADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDL 159
GI+N S + + I AYL + V+ F ++ H NSYC G+++L
Sbjct: 85 QVPGIINLSHIYHWPEDQPYDIKKAYLDLCSVLTVFFKQLGVNVDVHATPNSYCDGDYNL 144
Query: 160 SIAGRKFAGIAQR-RIKKG 177
+I G+K G AQR +KKG
Sbjct: 145 NIDGQKVVGTAQRVLLKKG 163
>gb|AAC37133.1| unknown [Rhodococcus erythropolis]
Length = 246
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 83/201 (41%), Gaps = 23/201 (11%)
Query: 35 VWTEVFLKTINQEPNQL-ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNI 93
+ L+ ++PN ++ I+ RT+ G LD P F A ++G+ PV R
Sbjct: 20 AFASALLRRTGRDPNASGLVRIYSPARTLSFGRLDAVRPQFPAAAAAARHHGFTPVVRGA 79
Query: 94 GGLAVVADDGILNFSLVIPDHFSESISISNAYLI-----MVDVIRESFSDYYQRIEYHEI 148
GG A + L +V PD +E I + +V V+R D RI +
Sbjct: 80 GGRAAAYHEQTLVVEIVSPD--TEGIVGARPRFQRLTPRIVAVLRTLGVD--ARI--GPV 133
Query: 149 KNSYCPGNFDLSIAGR-KFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQG 207
YCPG++ ++ AGR K AG AQR + + L V R L
Sbjct: 134 PGEYCPGDWTVNGAGRVKLAGTAQRIVAGAWLFGFELVVADSDPVRAVL----------A 183
Query: 208 EVTKVNYPQIDPECMATLSEL 228
+V + DP A+L++L
Sbjct: 184 DVNAALELEFDPATAASLTDL 204
>ref|ZP_00379800.1| COG0095: Lipoate-protein ligase A [Brevibacterium linens BL2]
Length = 244
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 18/162 (11%)
Query: 29 GALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVP 88
G + + V L ++ L ++ T+ G DR LP F A ++G+ P
Sbjct: 10 GPIEELAFARVLLDSVKHGTRGATLRMYRPAPTLAFGARDRFLPGFPAAIEAAKDHGFTP 69
Query: 89 VTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRI----- 143
R++GG A G SLVI DH I S+A++ +F Y +
Sbjct: 70 ALRSLGGRAAAYHRG----SLVI-DH----IEPSDAFIKDTTARFSAFGQDYVEVLRGIG 120
Query: 144 ---EYHEIKNSYCPGNFDLSIAGR-KFAGIAQRRIKKGIVVS 181
EI YCPG +++AGR K G AQR + + S
Sbjct: 121 VDARLGEIPGEYCPGEHSVNVAGRIKAIGTAQRVVSGAWLFS 162
>ref|YP_001761303.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
gb|ACA87208.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
Length = 230
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%)
Query: 91 RNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKN 150
R GG V G++N S+V P +S+S +Y +++D++ + Y + E E++
Sbjct: 63 RQTGGSPVPQTSGVINLSMVYPWPKDNPLSMSGSYQLLIDILTQWLGHYCIQGETGEVEG 122
Query: 151 SYCPGNFDLSIAGRKFAGIAQR 172
+YC G ++ + +K G AQR
Sbjct: 123 AYCNGAYNFVVKEQKLIGTAQR 144
>ref|ZP_02943990.1| lipoate-protein ligase A [Micrococcus luteus NCTC 2665]
gb|EDT57985.1| lipoate-protein ligase A [Micrococcus luteus NCTC 2665]
Length = 256
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 17/154 (11%)
Query: 61 TVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSE--- 117
TV G D +LP F A ++G+ PV R GG A G L + DH S+
Sbjct: 54 TVAFGQRDARLPGFAAAAAAARSHGFEPVVRRAGGRAAAYHHGCL-----VVDHLSQQED 108
Query: 118 -SISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR------KFAGIA 170
+++ + D+ +F+ EI YCPG F S+ G K AG A
Sbjct: 109 AALTQQARFAEFADLFVRAFARMDVPASVGEIPGEYCPGEF--SVQGPAPTYPVKLAGSA 166
Query: 171 QRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAG 204
QR +K + S ++ V R L+ + E G
Sbjct: 167 QRVVKGAFLFSTHVVVSDPAPLRAVLVDVYRELG 200
>ref|YP_001350189.1| hypothetical protein PSPA7_4853 [Pseudomonas aeruginosa PA7]
gb|ABR85794.1| hypothetical protein PSPA7_4853 [Pseudomonas aeruginosa PA7]
Length = 227
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 53 LHIW-PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSL-- 109
L +W P R +++ ++L FE A + G+ + R+ GG V G+LN +L
Sbjct: 30 LLLWQPRDRALVMPRRMQRLERFEPASAAVAGRGWPVLLRDTGGEPVPQSPGVLNIALSY 89
Query: 110 VIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGI 169
+ +E I AY + I + + + S+C G +++++ GRK AG
Sbjct: 90 ALGAGDNEQTRIETAYQRLCQPICDWLRERGLDAGVGAVPGSFCDGRYNVTLDGRKLAGT 149
Query: 170 AQRRIKKGIVVSIYLS 185
AQR + G + L+
Sbjct: 150 AQRWRRNGAGRPVVLA 165
>ref|ZP_00989556.1| hypothetical protein V12B01_17646 [Vibrio splendidus 12B01]
gb|EAP95490.1| hypothetical protein V12B01_17646 [Vibrio splendidus 12B01]
Length = 233
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 53 LHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIP 112
L +W ++ ++ P + ++ G+ +R GG V GI+N S +
Sbjct: 38 LMLWQAKTPTLVLPAGKKWPVTVEYRKQLAAQGWQLTSRKTGGAPVPQLPGIINLSHIYH 97
Query: 113 DHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQR 172
E+ +I AYL + +V+ F + ++ H SYC G+++L+I +K G AQR
Sbjct: 98 WPRDEAYNIQKAYLHLCNVLTLFFKELGIDVDVHATPGSYCDGDYNLNINRQKIVGTAQR 157
Query: 173 RIKK 176
+ K
Sbjct: 158 VLLK 161
>ref|ZP_00965333.1| COG0095: Lipoate-protein ligase A [Pseudomonas aeruginosa C3719]
gb|EAZ56486.1| hypothetical protein PACG_05221 [Pseudomonas aeruginosa C3719]
Length = 227
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 53 LHIW-PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSL-- 109
L +W P R +++ +L F A + G+ + R+ GG V G+LN +L
Sbjct: 30 LLLWLPCDRALVMPRRMERLEGFAPASAAVAERGWPVLLRDTGGEPVPQSPGVLNIALSY 89
Query: 110 VIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGI 169
+ +E I AYL + I + + + S+C G +++++ GRK AG
Sbjct: 90 ALGPGDNEQTRIETAYLRLCQPICDWLRERGLDAGVGAVAGSFCDGRYNVTLDGRKLAGT 149
Query: 170 AQRRIKKGIVVSIYLS 185
AQR + G + L+
Sbjct: 150 AQRWRRNGAGRPVVLA 165
>ref|ZP_00971259.1| COG0095: Lipoate-protein ligase A [Pseudomonas aeruginosa 2192]
gb|EAZ62343.1| hypothetical protein PA2G_05776 [Pseudomonas aeruginosa 2192]
Length = 227
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 53 LHIW-PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSL-- 109
L +W P R +++ +L F A + G+ + R+ GG V G+LN +L
Sbjct: 30 LLLWQPCDRALVMPRRMERLEGFAPASAAVAERGWPVLLRDTGGEPVPQSPGVLNIALSY 89
Query: 110 VIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGI 169
+ +E I AYL + I + + + S+C G +++++ GRK AG
Sbjct: 90 ALGPGDNEQTRIETAYLRLCQPICDWLRERGLDAGVGAVAGSFCDGRYNVTLDGRKLAGT 149
Query: 170 AQRRIKKGIVVSIYLS 185
AQR + G + L+
Sbjct: 150 AQRWRRNGAGRPVVLA 165
>ref|NP_252976.1| hypothetical protein PA4286 [Pseudomonas aeruginosa PAO1]
ref|ZP_01364047.1| hypothetical protein PaerPA_01001150 [Pseudomonas aeruginosa PACS2]
ref|YP_792631.1| putative lipoate-protein ligase [Pseudomonas aeruginosa UCBPP-PA14]
gb|AAG07674.1|AE004844_6 hypothetical protein PA4286 [Pseudomonas aeruginosa PAO1]
gb|ABJ13556.1| putative lipoate-protein ligase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 227
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 53 LHIW-PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSL-- 109
L +W P R +++ +L F A + G+ + R+ GG V G+LN +L
Sbjct: 30 LLLWQPCDRALVMPRRMERLEGFAPASAAVAERGWPVLLRDTGGEPVPQSPGVLNIALSY 89
Query: 110 VIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGI 169
+ +E I AYL + I + + + S+C G +++++ GRK AG
Sbjct: 90 ALGPGDNEQTRIETAYLRLCQPICDWLRERGLDAGVGAVAGSFCDGRYNVTLDGRKLAGT 149
Query: 170 AQRRIKKGIVVSIYLS 185
AQR + G + L+
Sbjct: 150 AQRWRRNGAGRPVVLA 165
>ref|YP_136772.1| hypothetical protein rrnAC2235 [Haloarcula marismortui ATCC 43049]
gb|AAV47066.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 227
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 15/210 (7%)
Query: 34 FVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNI 93
F T +T+ ++ + L +W R V G D ++ A + GY + R +
Sbjct: 15 FERTREIAETVAED-REPALRVWRPHRQVAFGRRDANSDSYDRACRAARDRGYTVIERAV 73
Query: 94 GGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYC 153
GG AV ++FSL +P +I + Y ++ + D E ++C
Sbjct: 74 GGRAVAYTGSTVSFSLAVPTEDPRG-TIDDRYEWAKTAVQRALEDCGITARTGEPDAAFC 132
Query: 154 PGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVN 213
PG+ + G K +G+AQ R+++ + V + V D A +++ YE+ ++
Sbjct: 133 PGSHSIQADG-KISGLAQ-RVRQSVAVIGGIVVVRDHEAIAEVLAPIYES--------LD 182
Query: 214 YPQIDPECMATLSEL--LETPFTVAEVLER 241
P DP+ + +++ + P V LER
Sbjct: 183 VP-FDPQSVGSVANAGGTDDPEQVIAALER 211
>ref|YP_326509.1| homolog to lipoate-protein ligase [Natronomonas pharaonis DSM 2160]
emb|CAI48943.1| homolog to lipoate-protein ligase [Natronomonas pharaonis DSM 2160]
Length = 234
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 8/186 (4%)
Query: 53 LHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIP 112
L +W + V G D +E A+ GY P+ R GG AV G + F+ +
Sbjct: 33 LRVWQPPKHVAFGRRDSAADGYEHARLAARERGYTPIQRRAGGTAVAYAPGTVAFAYAVS 92
Query: 113 DHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQR 172
I + Y + + + + + E ++CPG L G K AG+AQR
Sbjct: 93 TATGRG-GIEDRYRTATERLLAALASVGAAVRRGEPSATFCPGTHSLRADG-KVAGLAQR 150
Query: 173 RIKKGIVVSIYLSVCGDQ--AARGQLIKDFYEA-GTQGEVTKVNYPQI--DPECMATLSE 227
++ +V Y+ V D+ AA +++ Y A GT + T V + P +++
Sbjct: 151 VKEETALVGGYV-VGTDRASAAVADVLEPVYRALGTPFDPTTVGSVEAAGGPASAGQVAD 209
Query: 228 LLETPF 233
+E F
Sbjct: 210 AIEASF 215
>ref|YP_001020796.1| lipoate-protein ligase A-like protein [Methylibium petroleiphilum
PM1]
gb|ABM94561.1| lipoate-protein ligase A-like protein [Methylibium petroleiphilum
PM1]
Length = 258
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%)
Query: 52 ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
+ H+W T ++ R+ FE A G R GG V G++N SL
Sbjct: 50 VAHVWEATPGFVVPASYRRFERFEAACAIFAAQGLPVQVRCSGGGLVPQGPGMVNLSLAW 109
Query: 112 PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQ 171
H + + Y + +++ S + + + S+C G ++L++ GRK AG AQ
Sbjct: 110 RTHAAMGSAADAVYTALCRLLQASAATFGILATPQAVSGSFCDGRYNLAVNGRKVAGTAQ 169
>ref|YP_700806.1| possible lipoate-protein ligase A [Rhodococcus sp. RHA1]
gb|ABG92648.1| possible lipoate-protein ligase A [Rhodococcus sp. RHA1]
Length = 246
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 19/180 (10%)
Query: 47 EPNQ-LILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGIL 105
EPN ++ I+ T+ G LD P F A E +G+ PV R GG A + L
Sbjct: 32 EPNAPALIRIYSPAPTLSFGRLDAVRPQFPAAAAEARRHGFTPVVRGAGGRAAAYHEQTL 91
Query: 106 NFSLVIPDHFSESISISNAYLI-----MVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLS 160
+ D SE + + +V+V+R+ D RI + YCPG++ ++
Sbjct: 92 VVEMFSSD--SEGMVGARPRFQRITPRLVEVLRKLGVD--ARI--GPVPGEYCPGDWTVN 145
Query: 161 IAGR-KFAGIAQRRIKKGIVVSIYLSVCGDQAARGQL------IKDFYEAGTQGEVTKVN 213
AGR K AG AQR + + L V R L ++ ++ GT +T +N
Sbjct: 146 GAGRVKLAGTAQRIVAGAWLFGFELVVSDSDPVRAVLTDVNAALELEFDPGTAASLTDLN 205
>ref|YP_943083.1| hypothetical protein Ping_1694 [Psychromonas ingrahamii 37]
gb|ABM03484.1| conserved hypothetical protein [Psychromonas ingrahamii 37]
Length = 236
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 53 LHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIP 112
L +W ++ ++ P + K + + ++ +R GG V GI+N S +
Sbjct: 37 LMLWQAKEATLILPAGKKWPESDALKAGLLADEWLLHSRKTGGAPVPQCPGIINLSHLYL 96
Query: 113 DHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQR 172
SI AY + V+ F + + H K SYC G+++++I G+K G AQR
Sbjct: 97 WSKDTPYSIPQAYENLCTVLHGFFYQFNLVSKAHATKFSYCDGDYNININGKKIVGTAQR 156
Query: 173 RI-KKG 177
I KKG
Sbjct: 157 VILKKG 162
>ref|ZP_00963296.1| hypothetical protein NAS141_15228 [Sulfitobacter sp. NAS-14.1]
gb|EAP80040.1| hypothetical protein NAS141_15228 [Sulfitobacter sp. NAS-14.1]
Length = 232
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 55 IW-PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPD 113
+W P R ++ R P FE AK G+ R GG AV G+LN +L
Sbjct: 31 LWSPRRRALVCPASLRLKPGFETAKRNSATRGWPLHLRPTGGGAVPQGPGVLNLALAF-- 88
Query: 114 HFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQR 172
+ SI + Y ++ +I+ + + NS+C G ++LS+ RK G AQR
Sbjct: 89 TADRTFSIEDGYRLITRIIQNAIPAGW---ATGATPNSFCDGAWNLSLNRRKVIGTAQR 144
>ref|YP_001751625.1| conserved hypothetical protein [Pseudomonas putida W619]
gb|ACA75256.1| conserved hypothetical protein [Pseudomonas putida W619]
Length = 234
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 57 PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLV--IPDH 114
P +++ +L FE A +E+ G+ + R GG V + +N +LV P
Sbjct: 38 PTDHALVMPRRMSRLDNFETACSELAIAGWPVLLRETGGEPVPQSNSTVNVALVYVAPRS 97
Query: 115 FSESISISNAY----LIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIA 170
+ I NAY L + DV+RE + EI ++C G +++++ GRK G A
Sbjct: 98 EGDHGRIENAYERLCLPLCDVLRE----WGGVASVGEIDGAFCDGRYNVNLNGRKLVGTA 153
Query: 171 QR 172
QR
Sbjct: 154 QR 155
>ref|YP_001855254.1| hypothetical protein KRH_14010 [Kocuria rhizophila DC2201]
dbj|BAG29748.1| hypothetical protein [Kocuria rhizophila DC2201]
Length = 242
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 10/161 (6%)
Query: 49 NQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFS 108
+ +L ++ TV G D P F A+ + + P+ R +GG A G L
Sbjct: 31 TEPVLRVYQPRPTVAFGRRDELNPGFARARQAALDAAFTPLVRRVGGRAAAYHGGCLVID 90
Query: 109 LVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR---- 164
V PD ++ I + Y + D++ + + + EI YC G + + G
Sbjct: 91 HVEPDPDPKT-GIQDRYRLFGDMVVAALEELEVPAQVGEIPGEYCAGEYSVHAPGTAAHP 149
Query: 165 ----KFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFY 201
K AG AQR + S + V + RG +++D Y
Sbjct: 150 RRPVKLAGTAQRVVAGAWYFSTVVVVEESEPLRG-VLEDVY 189
>ref|YP_001265810.1| Lipoate-protein ligase A-like protein [Pseudomonas putida F1]
gb|ABQ76626.1| Lipoate-protein ligase A-like protein [Pseudomonas putida F1]
Length = 234
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
Query: 38 EVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLA 97
E+ E +L P +++ +L FE+A E+ G+ + R GG
Sbjct: 19 ELLAAVCRGERENGVLFWRPTDHALVMPRRMSRLGNFEVACAELAIAGWPVLLRETGGEP 78
Query: 98 VVADDGILNFSLV--IPDHFSESISISNAY----LIMVDVIRESFSDYYQRIEYHEIKNS 151
V +N +LV P + I NAY L + DV+RE + EI +
Sbjct: 79 VPQSHSTVNVALVYAAPRSEGDHGRIENAYERLCLPLCDVLRE----WGGVASVGEIDGA 134
Query: 152 YCPGNFDLSIAGRKFAGIAQR 172
+C G +++++ GRK G AQR
Sbjct: 135 FCDGRYNVNLNGRKLVGTAQR 155
>ref|NP_742589.1| hypothetical protein PP_0423 [Pseudomonas putida KT2440]
gb|AAN66053.1|AE016234_6 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 234
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
Query: 38 EVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLA 97
E+ E +L P +++ +L FE+A E+ G+ + R GG
Sbjct: 19 ELLAAVCRGERESGVLFWRPTDHALVMPRRMSRLGNFEVACAELAIAGWPVLLRETGGEP 78
Query: 98 VVADDGILNFSLV--IPDHFSESISISNAY----LIMVDVIRESFSDYYQRIEYHEIKNS 151
V +N +LV P + I NAY L + DV+RE + EI +
Sbjct: 79 VPQSHSTVNVALVYAAPRSEGDHGRIENAYERLCLPLCDVLRE----WGGVASVGEIDGA 134
Query: 152 YCPGNFDLSIAGRKFAGIAQR 172
+C G +++++ GRK G AQR
Sbjct: 135 FCDGRYNVNLNGRKLVGTAQR 155
>ref|ZP_00956492.1| hypothetical protein EE36_10330 [Sulfitobacter sp. EE-36]
gb|EAP83162.1| hypothetical protein EE36_10330 [Sulfitobacter sp. EE-36]
Length = 232
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 21/190 (11%)
Query: 55 IW-PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPD 113
+W P R ++ + P F+ AK G+ R G AV G+LN +L
Sbjct: 31 LWSPRRRALVCPASLKLKPGFDTAKRNSAARGWPLHLRPTGCGAVPQGPGVLNLALAF-- 88
Query: 114 HFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQR- 172
+ SI + Y ++ +I+ + + NS+C G ++LS+ GRK G AQR
Sbjct: 89 TADRTFSIEDGYRLITRLIQNAIPAGW---ATGATPNSFCDGAWNLSLKGRKVVGTAQRI 145
Query: 173 ----RIKKGIVVSIYLSVCGDQAARGQLIKDFY--------EAGTQGEVTKVNYPQIDPE 220
++ I+ + V GD A + F +AG + + Q DP
Sbjct: 146 RPVGNGQRRILAHALILVEGDLATGAAAVDAFQRDLSLGPIDAGVHTTLDRAIPSQRDP- 204
Query: 221 CMATLSELLE 230
M TL+ L+
Sbjct: 205 -MNTLAASLD 213
>ref|YP_643736.1| biotin/lipoate A/B protein ligase [Rubrobacter xylanophilus DSM
9941]
gb|ABG03924.1| biotin/lipoate A/B protein ligase [Rubrobacter xylanophilus DSM
9941]
Length = 254
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 55 IWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIP-- 112
+W R V + + +L F A G+ + RN GG AV A++G L+FSL +P
Sbjct: 39 LWRSPRYVAVTRPETRLAGFAEAARAARRLGFPVLVRNSGGGAVAANEGSLSFSLTLPVG 98
Query: 113 -------DHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR- 164
+ ++E + + A L + V E E++ +CPG + + G
Sbjct: 99 DLRQGLYERYAEGVELVVAALRRLGVAAEG----------GEVEGEFCPGAYSVRSGGAR 148
Query: 165 --KFAGIAQRRIKK 176
K AG+AQR ++
Sbjct: 149 GVKHAGLAQRVTRR 162
>ref|YP_001666700.1| conserved hypothetical protein [Pseudomonas putida GB-1]
gb|ABY96364.1| conserved hypothetical protein [Pseudomonas putida GB-1]
Length = 234
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 38 EVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLA 97
E+ E +L P +++ +L FE A E+ G+ + R GG
Sbjct: 19 ELLAAVCRGERESGVLFWRPTDHALVMPRRMSRLDNFEAACAELAIAGWPVLLRETGGEP 78
Query: 98 VVADDGILNFSLV--IPDHFSESISISNAY----LIMVDVIRESFSDYYQRIEYHEIKNS 151
V +N +LV P + I NAY L + DV+RE + EI +
Sbjct: 79 VPQSHSTVNVALVYAAPRSEGDHGRIENAYERLCLPLCDVLRE----WGGVASVGEIDGA 134
Query: 152 YCPGNFDLSIAGRKFAGIAQR 172
+C G +++++ GRK G AQR
Sbjct: 135 FCDGRYNVNLNGRKLVGTAQR 155
>ref|YP_350840.1| hypothetical protein PflO1_5112 [Pseudomonas fluorescens PfO-1]
gb|ABA76849.1| conserved hypothetical protein [Pseudomonas fluorescens PfO-1]
Length = 232
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 82/219 (37%), Gaps = 16/219 (7%)
Query: 40 FLKTINQEPNQLILHIW-PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAV 98
L ++ + L W P R +++ +LP F+ A G+ + R GG V
Sbjct: 18 LLASVCAGDAEFGLLFWQPSDRALVMPRRLNRLPGFDHACEVSAAAGWPVLLRETGGEPV 77
Query: 99 VADDGILNFSLVIPDHFSESI--SISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGN 156
+N +LV SE I Y + D I E + EI ++C G
Sbjct: 78 PQSASTINIALVYAPPRSEGDLNRIETGYRRLCDPICELLDELGGTSSLGEIDGAFCDGR 137
Query: 157 FDLSIAGRKFAGIAQR-RIKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVTKVNYP 215
F++++ GRK G AQR R +G + L G ++ D V + N
Sbjct: 138 FNVNLDGRKMVGTAQRWRQSQGGQRPVGL-------VHGAMLVDDERESMVAAVNRFNEA 190
Query: 216 -----QIDPECMATLSELLETPFTVAEVLERLRLTLRQL 249
++ L E P +A + E RL L Q+
Sbjct: 191 CGLEQRVRAASHIALHEKFPAPHALARLDELFRLMLAQI 229
>ref|NP_281113.1| hypothetical protein VNG2536C [Halobacterium sp. NRC-1]
ref|YP_001690247.1| conserved hypothetical protein [Halobacterium salinarum R1]
gb|AAG20593.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
emb|CAP14901.1| conserved hypothetical protein [Halobacterium salinarum R1]
Length = 227
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 26 KVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNG 85
+ PG + T L+ + N+ + +WP R V G D + A +
Sbjct: 7 RAPGRDADTAVTRDLLEWVRAN-NEPAVRVWPPGRVVAFGRRDANEAGYADAVAAARDRE 65
Query: 86 YVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMV-DVIRESFSDYYQRIE 144
+ V R++GG AV + L F+ + P + + Y MV D+I +
Sbjct: 66 FPTVERSVGGRAVAYTESTLAFARITPAEDMRT-GLDARYDAMVGDIIDALHAVGATGAR 124
Query: 145 YHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVSIYLSVCGDQAARGQLIKDFYEAG 204
E S+CPG+ + K AG+AQ R+ +G ++ + V D+ ++ Y A
Sbjct: 125 PGEPAASFCPGDHSVQADCGKLAGVAQ-RVTRGAALTSGVLVVDDRRVIANVLDAVYGA- 182
Query: 205 TQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLER 241
+ P DPE + ++ P + +ER
Sbjct: 183 -------LGAP-FDPESVGSVRAAGGDPADARDAVER 211
>ref|YP_267024.1| hypothetical protein CPS_0257 [Colwellia psychrerythraea 34H]
gb|AAZ27670.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 235
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 90 TRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK 149
R GG V GI+N S + SI+ AY + V+ F + + H +
Sbjct: 74 ARKTGGAPVPQCPGIINLSHLYLWSNDTPYSITQAYENLCTVLHGFFGQFNLISQAHATE 133
Query: 150 NSYCPGNFDLSIAGRKFAGIAQRRI-KKG 177
SYC G++++++ G+K G AQR I KKG
Sbjct: 134 FSYCDGDYNINLNGKKIVGTAQRVILKKG 162
>ref|YP_074390.1| lipoate-protein ligase [Symbiobacterium thermophilum IAM 14863]
dbj|BAD39546.1| lipoate-protein ligase [Symbiobacterium thermophilum IAM 14863]
Length = 327
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 23/211 (10%)
Query: 47 EPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILN 106
+P + +W TV++G Q Y E+ + + +G V R GG AV D+G LN
Sbjct: 26 DPTKSYFILWQNENTVVVGR--HQNTYEEINQRYVEEHGIRVVRRLSGGGAVYHDNGNLN 83
Query: 107 FSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKF 166
++ ++ + + + + V VI+ +E +K + G DL+I GRKF
Sbjct: 84 YTFIVDKDAAPDFNFA---VFTVPVIKT--------LERLGVKAEFT-GRNDLTIDGRKF 131
Query: 167 AGIAQRRIKKGIVVS---IYLSVCGDQAARGQLIKD--FYEAGTQ---GEVTKVNYPQID 218
G AQ +++G ++ I L + +++ F G + VT +N
Sbjct: 132 CGNAQ-YVRRGRIMHHGCIMLDSNLEVVVNALKVREAKFQSKGVKSVRSRVTTINAHAPR 190
Query: 219 PECMATLSELLETPFTVAEVLERLRLTLRQL 249
P M LL+ AE LE + LT QL
Sbjct: 191 PIAMEEFKSLLKGYILEAEGLETMALTPEQL 221
>ref|YP_642851.1| biotin/lipoate A/B protein ligase [Rubrobacter xylanophilus DSM
9941]
gb|ABG03039.1| biotin/lipoate A/B protein ligase [Rubrobacter xylanophilus DSM
9941]
Length = 260
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 5/170 (2%)
Query: 26 KVPGALSPFVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNG 85
++P A + + + + + + + P R V + D + F A E G
Sbjct: 16 RLPDAATAYGYARTVFEQVASGERPPTISLAPSVRHVGVTRRDTRREGFAAAVREAEGMG 75
Query: 86 YVPVTRNIGGLAVVADDGILNFSLVIPDHF-SESISISNAYLIMVDVIRESFSDYYQRIE 144
Y + R GG A+ A G FS+V P S Y + +F R E
Sbjct: 76 YPVLVRGAGGGAIAAGPGTFGFSIVRPRGGESARGGFRERYEEAAALALGAFRRLGVRAE 135
Query: 145 YHEIKNSYCPGNFDLSIA----GRKFAGIAQRRIKKGIVVSIYLSVCGDQ 190
E+++ +CPG+ + + G K GIAQR ++ V + VCG++
Sbjct: 136 VGEVRDEFCPGDHSIRVGGWEEGMKLCGIAQRVTRRAASVGGIVLVCGEE 185
>ref|YP_606221.1| hypothetical protein PSEEN0450 [Pseudomonas entomophila L48]
emb|CAK13404.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 234
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Query: 57 PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLV--IPDH 114
P +++ +L FE A E+ + + R GG V +N +LV P
Sbjct: 38 PTDHALVMPRRMSRLDNFEAACAELAIASWPVLLRETGGEPVPQSHATVNIALVYVAPRS 97
Query: 115 FSESISISNAY----LIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIA 170
+ I +AY L + DV+RE + EI ++C G +++++ GRK G A
Sbjct: 98 EGDHGRIESAYERLCLPLCDVLRE----WGGVASVGEIDGAFCDGRYNVNLNGRKLVGTA 153
Query: 171 QR 172
QR
Sbjct: 154 QR 155
>ref|YP_831805.1| hypothetical protein Arth_2325 [Arthrobacter sp. FB24]
gb|ABK03705.1| hypothetical protein Arth_2325 [Arthrobacter sp. FB24]
Length = 249
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 49/138 (35%), Gaps = 12/138 (8%)
Query: 53 LHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIP 112
L ++ TV G D LP FE A G+ P+ R GG A G L V P
Sbjct: 45 LRLYRPAPTVAFGQRDAHLPGFEAAARACRELGFEPLVRKAGGRAAAYHQGTLIVDHVEP 104
Query: 113 DHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR-------- 164
H + ++ ++ EI YCPG F S+ G
Sbjct: 105 -HADAIAGAKGRFAFFGGMLADALRSAGVHAAVGEIPGEYCPGEF--SVHGLDPADPQHR 161
Query: 165 -KFAGIAQRRIKKGIVVS 181
K G AQR + G + S
Sbjct: 162 VKLIGTAQRVVSGGWLFS 179
>ref|NP_972157.1| lipoyltransferase and lipoate-protein ligase family protein
[Treponema denticola ATCC 35405]
gb|AAS12068.1| lipoyltransferase and lipoate-protein ligase family protein
[Treponema denticola ATCC 35405]
Length = 331
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 49 NQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFS 108
N+ + +W + T++LG Q Y E+ + I NG V R GG A+ D LNFS
Sbjct: 29 NEEYVFLWSNSPTILLG--KNQNTYQEINEKYINENGIKVVRRITGGGAIYQDLENLNFS 86
Query: 109 LVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAG 168
V +E I Y+ +V+ +++ D + G D++I G+K G
Sbjct: 87 FVTKTKGNEKIDFKKYYIPIVNALKKIGVD------------AELSGRNDVTIEGQKCIG 134
Query: 169 IAQRRIKKGIVVS 181
+Q + +G V+S
Sbjct: 135 ASQ-SVWQGRVLS 146
>ref|NP_764772.1| hypothetical protein SE1217 [Staphylococcus epidermidis ATCC 12228]
ref|YP_188674.1| lipoate-protein ligase A family protein [Staphylococcus epidermidis
RP62A]
gb|AAO04816.1|AE016748_50 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gb|AAW54489.1| lipoate-protein ligase A family protein [Staphylococcus epidermidis
RP62A]
Length = 276
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 23/129 (17%)
Query: 73 YFELAKTEIG-----NNGYVPVTRNIGGLAVVADDGILNFSLVIPD-HFSESISISNAYL 126
YF+ + EI GY V R GG V+ D L +S+++P+ H + +++ AY
Sbjct: 52 YFQRLQKEIDIDKVKEKGYGLVRRQTGGRGVLHDKE-LTYSVIVPESHPNMPSTVTEAYK 110
Query: 127 IMVDVIRESFSD-----YY-------QRIEYHEIKNSYC---PGNFDLSIAGRKFAGIAQ 171
I+ + E F + Y+ +R + + ++S C P ++L + GRK AG AQ
Sbjct: 111 IISQGLLEGFKNLGFETYFAIPRSKEERDKLKQPRSSVCFDAPSWYELVVEGRKIAGSAQ 170
Query: 172 RRIKKGIVV 180
R +KG+++
Sbjct: 171 TR-QKGVIL 178
>ref|YP_588062.1| hypothetical protein Rmet_5934 [Ralstonia metallidurans CH34]
gb|ABF12793.1| conserved hypothetical protein [Ralstonia metallidurans CH34]
Length = 246
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 6/133 (4%)
Query: 52 ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
+ +W ++++ + P E A+ + G R GG V GILN SL
Sbjct: 32 VAQLWEAPLSLVIPRSYLRQPGIEEARAQFAAQGCPVWLRMSGGGLVPQGPGILNVSLAY 91
Query: 112 PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSI----AGRKFA 167
+ + YL + +VI + + + ++ S+C G F+L+ + RK A
Sbjct: 92 AVPRGVATWMEPVYLHLCEVIAQGLREVGVETHWQAVEGSFCDGRFNLAWGPGDSARKIA 151
Query: 168 GIAQ--RRIKKGI 178
G AQ RR +
Sbjct: 152 GTAQYWRRAPSAV 164
>ref|YP_299742.1| hypothetical protein Reut_B5553 [Ralstonia eutropha JMP134]
gb|AAZ64898.1| conserved hypothetical protein [Ralstonia eutropha JMP134]
Length = 248
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 14/129 (10%)
Query: 52 ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
+ +W ++++ + P FE A+ G R GG V GI+N SL
Sbjct: 32 VAQLWEAPVSLVVPRSYLRYPKFEAARDSFARRGCPVWLRMSGGGLVPQGPGIMNLSLAY 91
Query: 112 -----PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIA---- 162
P SE++ YL + +V+ + + + ++ S+C G F+L+
Sbjct: 92 RVDGPPGALSEAV-----YLHLCEVVGGALCNLDVDSHWQAVEGSFCDGRFNLAWGPPGQ 146
Query: 163 GRKFAGIAQ 171
RK AG AQ
Sbjct: 147 ARKIAGTAQ 155
>ref|YP_948057.1| hypothetical protein AAur_2320 [Arthrobacter aurescens TC1]
gb|ABM09495.1| conserved hypothetical protein [Arthrobacter aurescens TC1]
Length = 250
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 53/153 (34%), Gaps = 8/153 (5%)
Query: 61 TVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESIS 120
TV G D LP F A+ G+ P+ R GG A G L + P H +
Sbjct: 54 TVAFGQRDANLPGFHAAEEACRELGFEPLIRKAGGRAAAYHQGTLVIDHIEP-HPDAIVR 112
Query: 121 ISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNF-------DLSIAGRKFAGIAQRR 173
+ +++ + EI YCPG F D K G AQR
Sbjct: 113 AKARFAEFGELLAGALRSVGVHAAVGEIPGEYCPGEFSVHGEDPDFPAHSIKLIGTAQRV 172
Query: 174 IKKGIVVSIYLSVCGDQAARGQLIKDFYEAGTQ 206
+ G + S + V + R L + G +
Sbjct: 173 VSGGWLFSSVIVVEDSKPIRDVLTASYAALGLE 205
>ref|NP_243678.1| lipoate protein ligase [Bacillus halodurans C-125]
dbj|BAB06531.1| lipoate protein ligase [Bacillus halodurans C-125]
Length = 276
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 89 VTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSD-----YYQRI 143
V R GG V+ D + +V +H S++ AY I+ I E F D Y+
Sbjct: 72 VRRPTGGRGVLHDKELTYSVIVTEEHPDMPASVTEAYRIISQGILEGFRDLGLDAYFAVP 131
Query: 144 EYHEIKNSY----------CPGNFDLSIAGRKFAGIAQRRIKKGIVV---SIYLSVCGDQ 190
+ E KN+ P ++L + GRK AG AQ R +KG+++ SI L + D+
Sbjct: 132 KTEEEKNALKNPRSAVCFDAPSWYELVVEGRKVAGSAQTR-QKGVILQHGSIVLDIDEDK 190
>ref|NP_372057.1| similar to lipoate protein ligase [Staphylococcus aureus subsp.
aureus Mu50]
ref|NP_374646.1| hypothetical protein SA1363 [Staphylococcus aureus subsp. aureus
N315]
ref|YP_186431.1| lipoate-protein ligase A family protein [Staphylococcus aureus
subsp. aureus COL]
ref|YP_416878.1| probable lipoate-protein ligase A [Staphylococcus aureus RF122]
ref|YP_500143.1| hypothetical protein SAOUHSC_01629 [Staphylococcus aureus subsp.
aureus NCTC 8325]
ref|YP_001246960.1| biotin/lipoate A/B protein ligase [Staphylococcus aureus subsp.
aureus JH9]
ref|YP_001316759.1| biotin/lipoate A/B protein ligase [Staphylococcus aureus subsp.
aureus JH1]
ref|YP_001332471.1| biotin/lipoate A/B protein ligase [Staphylococcus aureus subsp.
aureus str. Newman]
ref|YP_001442110.1| hypothetical protein SAHV_1520 [Staphylococcus aureus subsp. aureus
Mu3]
dbj|BAB42625.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
dbj|BAB57695.1| similar to lipoate protein ligase [Staphylococcus aureus subsp.
aureus Mu50]
gb|AAW38207.1| lipoate-protein ligase A family protein [Staphylococcus aureus
subsp. aureus COL]
emb|CAI81094.1| probable lipoate-protein ligase A [Staphylococcus aureus RF122]
gb|ABD30707.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gb|ABQ49384.1| biotin/lipoate A/B protein ligase [Staphylococcus aureus subsp.
aureus JH9]
gb|ABR52472.1| biotin/lipoate A/B protein ligase [Staphylococcus aureus subsp.
aureus JH1]
dbj|BAF67709.1| biotin/lipoate A/B protein ligase [Staphylococcus aureus subsp.
aureus str. Newman]
dbj|BAF78403.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
Length = 276
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 23/129 (17%)
Query: 73 YFELAKTEIG-----NNGYVPVTRNIGGLAVVADDGILNFSLVIPD-HFSESISISNAYL 126
YF+ + EI G+ V R GG V+ D L +S+++P+ H + +++ AY
Sbjct: 52 YFQRLQKEIDIDKVKEKGFGLVRRQTGGRGVLHDKE-LTYSVIVPESHPNMPSTVTEAYR 110
Query: 127 IMVDVIRESFS----DYY--------QRIEYHEIKNSYC---PGNFDLSIAGRKFAGIAQ 171
++ + E F D Y +R + + ++S C P ++L + GRK AG AQ
Sbjct: 111 VISQGLLEGFKNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVVEGRKIAGSAQ 170
Query: 172 RRIKKGIVV 180
R +KG+++
Sbjct: 171 TR-QKGVIL 178
>ref|YP_041006.1| lipoate-protein ligase A protein [Staphylococcus aureus subsp.
aureus MRSA252]
emb|CAG40605.1| lipoate-protein ligase A protein [Staphylococcus aureus subsp.
aureus MRSA252]
Length = 276
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 23/129 (17%)
Query: 73 YFELAKTEIG-----NNGYVPVTRNIGGLAVVADDGILNFSLVIPD-HFSESISISNAYL 126
YF+ + EI G+ V R GG V+ D L +S+++P+ H + +++ AY
Sbjct: 52 YFQRLQKEIDIDKVKEKGFGLVRRQTGGRGVLHDKE-LTYSVIVPESHPNMPSTVTEAYR 110
Query: 127 IMVDVIRESFS----DYY--------QRIEYHEIKNSYC---PGNFDLSIAGRKFAGIAQ 171
++ + E F D Y +R + + ++S C P ++L + GRK AG AQ
Sbjct: 111 VISQGLLEGFKNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVVEGRKIAGSAQ 170
Query: 172 RRIKKGIVV 180
R +KG+++
Sbjct: 171 TR-QKGVIL 178
>ref|ZP_02235269.1| hypothetical protein DORFOR_02155 [Dorea formicigenerans ATCC
27755]
gb|EDR46920.1| hypothetical protein DORFOR_02155 [Dorea formicigenerans ATCC
27755]
Length = 332
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
Query: 47 EPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILN 106
EP + IL++W TV++G Q + E + NG R GG AV D G LN
Sbjct: 30 EPQECILYLWQNQNTVVIGR--NQNAWKECKVDSLEENGGHLARRLSGGGAVYHDLGNLN 87
Query: 107 FSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKF 166
F+ ++ E+ SI ++V +++ + + G D+ I G+KF
Sbjct: 88 FTFLVS---KENYSIDRQLEVIVKAVQKLGA------------KAEKSGRNDILIDGKKF 132
Query: 167 AGIA 170
+G A
Sbjct: 133 SGNA 136
>ref|NP_646302.1| hypothetical protein MW1485 [Staphylococcus aureus subsp. aureus
MW2]
ref|YP_043590.1| lipoate-protein ligase A protein [Staphylococcus aureus subsp.
aureus MSSA476]
dbj|BAB95350.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
emb|CAG43266.1| lipoate-protein ligase A protein [Staphylococcus aureus subsp.
aureus MSSA476]
Length = 276
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 23/129 (17%)
Query: 73 YFELAKTEIG-----NNGYVPVTRNIGGLAVVADDGILNFSLVIPD-HFSESISISNAYL 126
YF+ + EI G+ V R GG V+ D L +S+++P+ H + +++ AY
Sbjct: 52 YFQRLQKEIDIDKVKEKGFGLVRRQTGGRGVLHDKE-LTYSVIVPESHPNMPSTVTEAYR 110
Query: 127 IMVDVIRESFSD-----YY-------QRIEYHEIKNSYC---PGNFDLSIAGRKFAGIAQ 171
++ + E F + Y+ +R + + ++S C P ++L + GRK AG AQ
Sbjct: 111 VISQGLLEGFKNLGFNTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVVEGRKIAGSAQ 170
Query: 172 RRIKKGIVV 180
R +KG+++
Sbjct: 171 TR-QKGVIL 178
>ref|YP_494189.1| hypothetical protein SAUSA300_1494 [Staphylococcus aureus subsp.
aureus USA300]
ref|YP_001575420.1| lipoate--protein ligase A [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
ref|ZP_02760173.1| lipoate--protein ligase A [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gb|ABD21005.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gb|ABX29541.1| lipoate--protein ligase A [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
Length = 276
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 23/129 (17%)
Query: 73 YFELAKTEIG-----NNGYVPVTRNIGGLAVVADDGILNFSLVIPD-HFSESISISNAYL 126
YF+ + EI G+ V R GG V+ D L +S+++P+ H + +++ AY
Sbjct: 52 YFQRLQKEIDIDKVKEKGFGLVRRQTGGRGVLHDKE-LTYSVIVPESHPNMPSTVTEAYR 110
Query: 127 IMVDVIRESFS----DYY--------QRIEYHEIKNSYC---PGNFDLSIAGRKFAGIAQ 171
++ + E F D Y +R + + ++S C P ++L + GRK AG AQ
Sbjct: 111 VISQGLLEGFKNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVVEGRKIAGSAQ 170
Query: 172 RRIKKGIVV 180
R +KG+++
Sbjct: 171 TR-QKGVIL 178
>ref|YP_921337.1| putative lipoate-protein ligase A [Nocardioides sp. JS614]
gb|ABL79650.1| putative lipoate-protein ligase A [Nocardioides sp. JS614]
Length = 233
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 53 LHIW-PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
+HI+ P T V+ G D +LP F A G+ R GG AV L V
Sbjct: 22 IHIYSPTTPAVVFGRRDTRLPGFPTAVAAARRMGFDVAVRASGGRAVAYTQNTLVIDHVR 81
Query: 112 PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAG-RKFAGIA 170
D S + ++ + ++F+ E+ YCPG ++ G K G A
Sbjct: 82 HDPASVG-RLQERFVTYGQALADAFTALGIDARMGEVPGEYCPGAHSVNARGVVKLVGTA 140
Query: 171 QRRIKKGIVVSIYLSV 186
QR +K + S + V
Sbjct: 141 QRVVKDAWLFSSVIVV 156
>ref|YP_301312.1| putative lipoate protein ligase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
dbj|BAE18367.1| putative lipoate protein ligase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 276
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 20/136 (14%)
Query: 61 TVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPD-HFSESI 119
T+ +G R ++ K E GY V R GG V+ D L +S+++P+ H
Sbjct: 47 TLSIGYFQRLTKEIDIDKVE--EKGYGLVRRQTGGRGVLHDKE-LTYSVIVPESHPDMPS 103
Query: 120 SISNAYLIMVDVIRESFS------------DYYQRIEYHEIKNSYC---PGNFDLSIAGR 164
+++ AY ++ + + E F +R + + +++ C P ++L + GR
Sbjct: 104 TVTEAYRVISEGLLEGFKHLGFDASFAIPRSKEERAKLKQPRSAVCFDAPSWYELVVEGR 163
Query: 165 KFAGIAQRRIKKGIVV 180
K AG AQ R +KG+++
Sbjct: 164 KIAGSAQVR-QKGVIL 178
>ref|YP_728319.1| Lipoate-protein ligase A [Ralstonia eutropha H16]
sp|P27750|Y4148_RALEH Uncharacterized protein H16_B0148 (ORF 8)
emb|CAJ94954.1| Lipoate-protein ligase A [Ralstonia eutropha H16]
Length = 253
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Query: 74 FELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIR 133
E A+ + G R GG V GILN SL YL + +VI
Sbjct: 57 LETARADFAQQGCPVFLRMSGGGLVPQGPGILNLSLAYTVEQPPGARSDAVYLHLCEVIG 116
Query: 134 ESFSDYYQRIEYHEIKNSYCPGNFDLSI----AGRKFAGIAQ 171
++ + + S+C G ++L+ A RK AG AQ
Sbjct: 117 DALQSLGVDTHWQAVAGSFCDGRYNLAWGPPEAARKIAGTAQ 158
>ref|YP_818219.1| Lipoate-protein ligase A [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gb|ABJ61846.1| lipoate-protein ligase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 336
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
Query: 45 NQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGI 104
N +P + + +W + VI+G + Q + E+ + I + V R GG AV D G
Sbjct: 24 NLKPKKPVFALWQNKKAVIIG--ENQNTFSEVNQAYIESQNVQVVRRVSGGGAVYHDLGN 81
Query: 105 LNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR 164
+ F+ +P S S+ M D + ES + G DL IAG+
Sbjct: 82 ICFTFFVPVATSASVDFHQFVKPMADAL-ESLGIHVD-----------ISGRNDLEIAGK 129
Query: 165 KFAGIAQR 172
K +G AQR
Sbjct: 130 KVSGNAQR 137
>ref|YP_808102.1| Lipoate-protein ligase A [Lactococcus lactis subsp. cremoris SK11]
gb|ABJ71680.1| lipoate-protein ligase [Lactococcus lactis subsp. cremoris SK11]
Length = 333
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 45 NQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGI 104
N +P + + +W R VI+G Q + E+ + I ++ V R GG AV D+G
Sbjct: 24 NLKPTEPVFALWQNKRAVIVGR--NQNTFAEVNQDYIDSHDVQVVRRVSGGGAVYHDEGN 81
Query: 105 LNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR 164
+ F+ +P S S++ M Y+ + IK + G DL + G+
Sbjct: 82 ICFTFFVPVENSGSVNFKKFVQPM-----------YEALHAVGIK-AEITGRNDLEVEGK 129
Query: 165 KFAGIAQR 172
K +G AQR
Sbjct: 130 KISGNAQR 137
>ref|YP_001031437.1| lipoate-protein ligase [Lactococcus lactis subsp. cremoris MG1363]
emb|CAL96681.1| lipoate-protein ligase [Lactococcus lactis subsp. cremoris MG1363]
Length = 333
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 45 NQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGI 104
N +P + + +W R VI+G Q + E+ + I ++ V R GG AV D+G
Sbjct: 24 NLKPTEPVFALWQNKRAVIVGR--NQNTFAEVNQDYIDSHDVQVVRRVSGGGAVYHDEGN 81
Query: 105 LNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR 164
+ F+ +P S S++ M Y+ + IK + G DL + G+
Sbjct: 82 ICFTFFVPVENSGSVNFKKFVQPM-----------YEALHAVGIK-AEITGRNDLEVEGK 129
Query: 165 KFAGIAQR 172
K +G AQR
Sbjct: 130 KISGNAQR 137
>ref|NP_110077.1| lipoate protein ligase [Mycoplasma pneumoniae M129]
sp|P75394.1|LPLA_MYCPN Probable lipoate-protein ligase A (Lipoate--protein ligase)
gb|AAB96097.1| lipoate protein ligase [Mycoplasma pneumoniae M129]
Length = 339
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 52 ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
+++ W T+++G Q Y E+ +E+ + R GG AV D G + FS+++
Sbjct: 35 VIYFWQNANTIVVGR--NQNTYAEVNLSEVEKDKVNLFRRFSGGGAVFHDMGNICFSIIL 92
Query: 112 PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQ 171
P E + NAY + + + ++H G DL I G+KF+G+A+
Sbjct: 93 PKAKKE---MENAYEETTRNVVKFLNSVGVPAQFH--------GRNDLEIEGKKFSGLAE 141
Query: 172 RRIKKGIVV 180
K ++V
Sbjct: 142 YLSKDRVLV 150
>ref|YP_809967.1| Lipoate-protein ligase A [Oenococcus oeni PSU-1]
gb|ABJ56302.1| lipoate-protein ligase [Oenococcus oeni PSU-1]
Length = 334
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 14/128 (10%)
Query: 45 NQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGI 104
N +P + + +W VI+G Q + E+ + I + V R GG AV D G
Sbjct: 24 NLKPQEAVFSLWQNKNAVIVGR--NQNTFAEVNQDYIDEHDIQVVRRVSGGGAVYHDLGN 81
Query: 105 LNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR 164
+ F+ +P S + M D +RE D + G DL++ G+
Sbjct: 82 ICFTFFVPVASSAEVDFHKFVKPMYDALREVGID------------AQITGRNDLTVDGK 129
Query: 165 KFAGIAQR 172
K +G AQR
Sbjct: 130 KVSGNAQR 137
>ref|YP_001490395.1| biotin/lipoate A/B protein ligase family protein [Arcobacter
butzleri RM4018]
gb|ABV67726.1| biotin/lipoate A/B protein ligase family protein [Arcobacter
butzleri RM4018]
Length = 234
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 17/161 (10%)
Query: 52 ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
IL ++ ++V G Y L K E NN ++ I G V+ +++SL++
Sbjct: 38 ILRLYSWQKSVTFGAGQNPSDYGNLLK-EYKNN----FSKRITGGGVLFHGHDISYSLIL 92
Query: 112 PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHE-------IKNSYCPGNF---DLSI 161
P F ++ S+ Y ++ I E +S+ + + + K+ +C F D+ +
Sbjct: 93 PSSFIDNRSVKETYELICSFILEFYSNLGLKASFAKDIESIVLSKSPFCQVGFEAYDIIV 152
Query: 162 AGRKFAGIAQRRIKKGIVV--SIYLSVCGDQAARGQLIKDF 200
GRK G AQ+R K I SI + + G ++DF
Sbjct: 153 NGRKIGGNAQKRAKNVIFQHGSIPIKSIKNDEKYGASLEDF 193
>ref|YP_001395160.1| LplA [Clostridium kluyveri DSM 555]
gb|EDK33812.1| LplA [Clostridium kluyveri DSM 555]
Length = 330
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
Query: 50 QLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSL 109
+ IL++W TV++G Q + E E+ ++G V R GG AV D G LNF+
Sbjct: 33 ECILYLWQNRHTVVIGR--NQNCWKECKVKELEDDGGYLVRRLSGGGAVYHDLGNLNFTF 90
Query: 110 VIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGI 169
+ ++ ++ ++++ +++ N+ G D+++ GRKF+G
Sbjct: 91 AVK---KDNYNVDMQLQVIIEAVKKLGI------------NAEKTGRNDITVDGRKFSGN 135
Query: 170 A 170
A
Sbjct: 136 A 136
>ref|ZP_02967627.1| biotin/lipoate A/B protein ligase [bacterium Ellin514]
gb|EDU02950.1| biotin/lipoate A/B protein ligase [bacterium Ellin514]
Length = 239
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 11/144 (7%)
Query: 38 EVFLKTINQEPNQLILHIW-PMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNI-GG 95
E L Q + +L W P V+LG ++ L E VPV R GG
Sbjct: 19 EALLDYCEQGREEELLRFWEPRQHFVVLGYANKAATEVNLKACETN---LVPVLRRCSGG 75
Query: 96 LAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPG 155
V+ G LN+SLV+ I +A + D + ++ +S G
Sbjct: 76 GTVLQGPGCLNYSLVL------RIQRGSALATISDTNTYIMKQQLKALQPLLSTSSSVQG 129
Query: 156 NFDLSIAGRKFAGIAQRRIKKGIV 179
+ DL+I KF+G AQRR + ++
Sbjct: 130 HTDLAINNVKFSGNAQRRKRHFLI 153
>ref|NP_266219.1| lipoate-protein ligase [Lactococcus lactis subsp. lactis Il1403]
gb|AAK04161.1|AE006244_10 lipoate-protein ligase [Lactococcus lactis subsp. lactis Il1403]
Length = 333
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 47 EPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILN 106
+P + + +W R VI+G Q + E+ + I ++ V R GG AV D+G +
Sbjct: 26 KPTEPVFALWQNKRAVIVGR--NQNTFAEVNQDYIDSHDVQVVRRVSGGGAVYHDEGNIC 83
Query: 107 FSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKF 166
F+ +P S S++ M Y+ + IK + G DL + G+K
Sbjct: 84 FTFFVPVENSGSVNFKKFVQPM-----------YEALHAVGIK-AEITGRNDLEVEGKKI 131
Query: 167 AGIAQR 172
+G AQR
Sbjct: 132 SGNAQR 137
>ref|YP_253298.1| hypothetical protein SH1383 [Staphylococcus haemolyticus JCSC1435]
dbj|BAE04692.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 276
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 21/128 (16%)
Query: 73 YFELAKTEI-----GNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLI 127
YF+ K EI G+ V R GG V+ D + +V +H + +++ AY +
Sbjct: 52 YFQRLKKEIDIDKVNEKGFGLVRRQTGGRGVLHDKELTYSVIVSEEHPNMPSTVTEAYRV 111
Query: 128 MVDVIRESFS-----DYY-------QRIEYHEIKNSYC---PGNFDLSIAGRKFAGIAQR 172
+ + + E F Y+ +R + + +++ C P ++L + GRK AG AQ
Sbjct: 112 ISEGLLEGFKLLGFEAYFAIPRSKEEREKLKQPRSAVCFDAPSWYELVVEGRKIAGSAQT 171
Query: 173 RIKKGIVV 180
R +KG+++
Sbjct: 172 R-QKGVIL 178
>ref|XP_001349882.1| lipoate-protein ligase a [Plasmodium falciparum 3D7]
emb|CAD52290.1| lipoate-protein ligase a, putative [Plasmodium falciparum 3D7]
Length = 408
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 65/130 (50%), Gaps = 18/130 (13%)
Query: 46 QEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGIL 105
++ N+ IL +W R++I+G Q + E I +G + R GG AV D G +
Sbjct: 59 EKFNEPILFLWRNNRSIIIG--KNQNIWSECNLKNIKEDGVLVARRFTGGGAVYHDLGNV 116
Query: 106 NFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRK 165
F+ + + +I+ S+ +LI+++ ++ F+ IE + G D+++ +K
Sbjct: 117 CFTFL-----NNNINTSSNFLIILNTLKNHFN-----IE------AKTQGRNDITVNDQK 160
Query: 166 FAGIAQRRIK 175
+G A ++IK
Sbjct: 161 CSGSAFKKIK 170
>ref|YP_079777.1| putative lipoate protein ligase YqhM [Bacillus licheniformis ATCC
14580]
ref|YP_092191.1| YqhM [Bacillus licheniformis ATCC 14580]
gb|AAU24139.1| putative lipoate protein ligase YqhM [Bacillus licheniformis ATCC
14580]
gb|AAU41498.1| YqhM [Bacillus licheniformis DSM 13]
Length = 278
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 24/141 (17%)
Query: 73 YFELAKTEIG-----NNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLI 127
YF+ + EI +G V R GG V+ D + +V +H +++ AY +
Sbjct: 53 YFQNIEKEINLDAVKKHGLGFVRRPTGGRGVLHDQELTYSVIVSEEHPEMPKTVTEAYRV 112
Query: 128 MVDVIRESFS----DYYQRI-----EYHEIKN---SYC---PGNFDLSIAGRKFAGIAQR 172
+ + I E F D Y I E +KN S C P ++L + GRK AG AQ
Sbjct: 113 ISEGILEGFRELELDAYFAIPRTEKEKQSLKNPRSSVCFDAPSWYELVVEGRKVAGSAQT 172
Query: 173 RIKKGIVV---SIYLSVCGDQ 190
R +KG+++ SI L + D+
Sbjct: 173 R-QKGVILQHGSILLDLDEDK 192
>ref|ZP_01544999.1| lipoate-protein ligase [Oenococcus oeni ATCC BAA-1163]
gb|EAV38768.1| lipoate-protein ligase [Oenococcus oeni ATCC BAA-1163]
Length = 334
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 16/129 (12%)
Query: 45 NQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGI 104
N +P + + +W VI+G Q + E+ + I + V R GG AV D G
Sbjct: 24 NLKPKEAVFSLWQNKNAVIVGR--NQNTFAEVNQDYIDEHDIQVVRRVSGGGAVYHDLGN 81
Query: 105 LNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIK-NSYCPGNFDLSIAG 163
+ F+ +P S + M D + HE+ ++ G DL++ G
Sbjct: 82 ICFTFFVPVASSAEVDFHKFVKPMYDAL-------------HEVGIDAQITGRNDLTVDG 128
Query: 164 RKFAGIAQR 172
+K +G AQR
Sbjct: 129 KKVSGNAQR 137
>ref|YP_517975.1| hypothetical protein DSY1742 [Desulfitobacterium hafniense Y51]
dbj|BAE83531.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 334
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 21/126 (16%)
Query: 47 EPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILN 106
E +Q++L++W TV++G Q P+ E T + +G R GG AV D G LN
Sbjct: 32 EKDQILLYLWQNQNTVVIGR--NQNPWQECRCTLLEEDGGKLARRLSGGGAVFHDLGNLN 89
Query: 107 FSLVIPDHFSESISISNAYLIMVDV--IRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR 164
F+ ++ + L V+ I+ F+ G DL++ G+
Sbjct: 90 FTFIMDRELYDLHKQLQVILGGVNSLGIQAEFT-----------------GRNDLTVEGK 132
Query: 165 KFAGIA 170
KF+G A
Sbjct: 133 KFSGNA 138
>ref|ZP_01368786.1| lipoyltransferase and lipoate-protein ligase [Desulfitobacterium
hafniense DCB-2]
gb|EAT52368.1| lipoyltransferase and lipoate-protein ligase [Desulfitobacterium
hafniense DCB-2]
Length = 334
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 21/126 (16%)
Query: 47 EPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILN 106
E +Q++L++W TV++G Q P+ E T + +G R GG AV D G LN
Sbjct: 32 EKDQILLYLWQNQNTVVIGR--NQNPWQECRCTLLEEDGGKLARRLSGGGAVFHDLGNLN 89
Query: 107 FSLVIPDHFSESISISNAYLIMVDV--IRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR 164
F+ ++ + L V+ I+ F+ G DL++ G+
Sbjct: 90 FTFIMDRELYDLHKQLQVILGGVNSLGIQAEFT-----------------GRNDLTVEGK 132
Query: 165 KFAGIA 170
KF+G A
Sbjct: 133 KFSGNA 138
>ref|YP_001887572.1| lipoate-protein ligase A [Clostridium botulinum B str. Eklund 17B]
gb|ACD23154.1| lipoate-protein ligase A [Clostridium botulinum B str. Eklund 17B]
Length = 311
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 45 NQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGI 104
N + N+ IL++W RTV++G Q PY E + N V R GG V D G
Sbjct: 25 NLKDNENILYLWQNDRTVVIGR--NQNPYSECNLDYMKENNITLVRRISGGGTVFHDLGN 82
Query: 105 LNFSLVIPD 113
LNF+ + +
Sbjct: 83 LNFTFLTKE 91
>ref|NP_111510.1| Lipoate-protein ligase A [Thermoplasma volcanium GSS1]
dbj|BAB60163.1| lipoate-protein ligase [Thermoplasma volcanium GSS1]
Length = 262
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 46 QEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIG-----NNGYVPVTRNIGGLAVVA 100
+E ++ IL + R+VI+G YF++A+ E+ N + R GG AV
Sbjct: 29 KEGDKPILRFYRHDRSVIIG-------YFQIAEEEVDLDYMKRNNIMLARRYTGGGAVYH 81
Query: 101 DDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFS 137
D G LNFS++ H ++I+ + M + + S S
Sbjct: 82 DLGDLNFSVITESH---DMNITAMFRTMNEAVVRSLS 115
>ref|YP_053278.1| lipoate-protein ligase [Mesoplasma florum L1]
gb|AAT75394.1| lipoate-protein ligase [Mesoplasma florum L1]
Length = 334
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 52 ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVI 111
IL+IW + T+++G Q Y E+ E + + RN GG V D G + +SL++
Sbjct: 32 ILYIWQNSNTIVVGR--NQNTYAEINIAEAMKDEVKIIRRNTGGGTVFHDMGNVCYSLIV 89
Query: 112 PDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQ 171
+ + S SN + + +I+ Y R E N+ G D+ I G K +G AQ
Sbjct: 90 NN---DKNSQSNFEIALQPIIQ------YLR---SEGLNANFSGRNDIEIDGYKISGNAQ 137
Query: 172 RRIKKGIV 179
+ I+
Sbjct: 138 LKTNNKIL 145
>ref|YP_805237.1| Lipoate-protein ligase A [Pediococcus pentosaceus ATCC 25745]
gb|ABJ68795.1| lipoate-protein ligase [Pediococcus pentosaceus ATCC 25745]
Length = 328
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 46 QEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGIL 105
+EP + +W +I+G Q + E+ + + + V R GG AV D G L
Sbjct: 28 KEP---VFALWQNNNAIIVGQ--NQNTFGEVNQDFVDEHQIEVVRRVTGGGAVYHDLGNL 82
Query: 106 NFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRK 165
NF+L +P I +A +V + FS+ R + ++ G DL + G+K
Sbjct: 83 NFTLFVP--------IESA----ANVDFKKFSEPVLRALHTLGIDAEASGRNDLLVNGKK 130
Query: 166 FAGIAQRRIK 175
+G+AQR K
Sbjct: 131 ISGVAQRYAK 140
>ref|YP_001487414.1| lipoate protein ligase A [Bacillus pumilus SAFR-032]
gb|ABV62854.1| lipoate protein ligase A [Bacillus pumilus SAFR-032]
Length = 278
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 33/174 (18%)
Query: 39 VFLKTINQEP------NQLILH------IWPMTRTVILGMLDRQLPYFELAKTEIGNN-- 84
F+ T NQ+P ++ +L+ I P+ R + YF+ + EI
Sbjct: 7 CFIDTGNQDPAFNMAMDEALLYWHSEKLIPPVIRFYGWNPATLSVGYFQHVEKEINMEAV 66
Query: 85 ---GYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFS---- 137
G V R GG V+ D + +V +H +++ AY ++ + I E F
Sbjct: 67 ERYGLGFVRRPTGGRGVLHDQELTYSVIVSEEHPEMPATVTEAYRVISEGILEGFKELGL 126
Query: 138 DYYQRI-----EYHEIKN---SYC---PGNFDLSIAGRKFAGIAQRRIKKGIVV 180
D Y I E +KN S C P ++L + GRK AG AQ R +KG+++
Sbjct: 127 DAYFAIPRTDKEKESLKNPRSSVCFDAPSWYELVVEGRKVAGSAQTR-QKGVIL 179
>ref|NP_390333.1| hypothetical protein BSU24530 [Bacillus subtilis subsp. subtilis
str. 168]
sp|P54511|YQHM_BACSU Uncharacterized protein yqhM
emb|CAB14384.1| yqhM [Bacillus subtilis subsp. subtilis str. 168]
Length = 278
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 28/143 (19%)
Query: 73 YFELAKTEIG-------NNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAY 125
YF+ K EI N G+V R GG V+ D + +V +H +++ AY
Sbjct: 53 YFQNIKKEINFEAVHKYNLGFV--RRPTGGRGVLHDQELTYSVIVSEEHPEMPATVTEAY 110
Query: 126 LIMVDVIRESFS----DYYQRI-----EYHEIKN---SYC---PGNFDLSIAGRKFAGIA 170
++ + I + F D Y I E +KN S C P ++L + GRK AG A
Sbjct: 111 RVISEGILQGFRNLGLDAYFAIPRTEKEKESLKNPRSSVCFDAPSWYELVVEGRKVAGSA 170
Query: 171 QRRIKKGIVV---SIYLSVCGDQ 190
Q R +KG+++ SI L + D+
Sbjct: 171 QTR-QKGVILQHGSILLDLDEDK 192
>ref|YP_001727700.1| Lipoate-protein ligase A [Leuconostoc citreum KM20]
gb|ACA82256.1| Lipoate-protein ligase A [Leuconostoc citreum KM20]
Length = 336
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Query: 45 NQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGI 104
N + N+ I +W R +I+G + Q + E+ + + + V R GG AV D G
Sbjct: 24 NLKLNEPIFALWQNKRAIIVG--ENQNTFSEVNEDYVKAHDIQVVRRVSGGGAVYHDLGN 81
Query: 105 LNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGR 164
+ F+ +P S + M D + ES I+ S G DL IAG+
Sbjct: 82 ICFTFFVPVASSAKVDFHQFVKPMADAL-ESLG----------IRVS-LSGRNDLEIAGK 129
Query: 165 KFAGIAQR 172
K +G AQR
Sbjct: 130 KVSGNAQR 137
>ref|ZP_02328379.1| YqhM [Paenibacillus larvae subsp. larvae BRL-230010]
Length = 314
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 30/143 (20%)
Query: 73 YFELAKTEIG-------NNGYVPVTRNIGGLAVVADDGILNFSLVIPD-HFSESISISNA 124
YF+ A+ EI N G+V R GG AV+ D L +SL++ + H S++ A
Sbjct: 85 YFQKAEKEIHFDRVREENIGFV--RRPTGGRAVLHDQE-LTYSLIVSEKHPGIPASVTEA 141
Query: 125 YLIMVDVIRESF------------SDYYQRIEYHEIKNSYC---PGNFDLSIAGRKFAGI 169
Y ++ + + F + ++ +Y + ++ C P ++L + GRK AG
Sbjct: 142 YRVLSEGLLLGFRKLGLAAEMVNLATEEEKQKYTSLGSAACFDSPSWYELVVEGRKVAGS 201
Query: 170 AQRRIKKGIVV---SIYLSVCGD 189
AQ R KG+V+ SI L + D
Sbjct: 202 AQVR-NKGVVLQHGSILLELDAD 223
>ref|YP_001626612.1| lipoate-protein ligase A [Renibacterium salmoninarum ATCC 33209]
gb|ABY25198.1| lipoate-protein ligase A [Renibacterium salmoninarum ATCC 33209]
Length = 228
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 52/152 (34%), Gaps = 13/152 (8%)
Query: 61 TVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESIS 120
T+ G D LP F + +G+ P+ R GG G L + DH
Sbjct: 49 TMAFGQRDANLPGFAASAAAARRHGFEPLVRKAGGRVAPYHQGCL-----VVDHLEPETD 103
Query: 121 ISNAYLIMVDVIRESFSDYYQRIEYH----EIKNSYCPGNFDLSIAGR----KFAGIAQR 172
+ F++ Q + EI YCPG F + G K G AQR
Sbjct: 104 AVLKAKSRFSYFGQLFAEVLQNVGVDAGIGEIPGEYCPGEFSVHGNGSGLSLKLVGTAQR 163
Query: 173 RIKKGIVVSIYLSVCGDQAARGQLIKDFYEAG 204
+ + S + V R LI + E G
Sbjct: 164 VVAGAWLFSSVIIVENGDPLRDVLIDCYRELG 195
>ref|NP_954816.1| helicase [Gordonia westfalica]
emb|CAE09137.1| putative helicase; putative methylase [Gordonia westfalica]
Length = 1630
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 17/124 (13%)
Query: 153 CPGNFDLSIAGRKFAGIAQRRIK--KGIVVSIYLSVCGDQAARGQLIKDFYEAGTQGEVT 210
CPG ++ + A+RR G+ + G R QL+ D A + EV
Sbjct: 1421 CPGRPGFTLDASQVFTTAERRTATASGLATRLENLYTGLDDTRAQLVADI--ASYRREV- 1477
Query: 211 KVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQLGFSLTEKSPDQALLTNFDAVY 270
+VN P+ID PFT A+ L+ ++ LRQL + + + A
Sbjct: 1478 EVNAPRID------------APFTQADELQTKQVRLRQLRMEIERAQQSEEAVAARQAAE 1525
Query: 271 ERMQ 274
ERM+
Sbjct: 1526 ERMR 1529
>ref|ZP_00236482.1| flagellar basal-body rod protein flgF, putative [Bacillus cereus
G9241]
gb|EAL15758.1| flagellar basal-body rod protein flgF, putative [Bacillus cereus
G9241]
Length = 257
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 20/100 (20%)
Query: 200 FYEAGTQGEVTKVNYPQIDPECMATLSELLETPFTVAE----------------VLERLR 243
Y+ GTQ + ++ +D E A L + FT+AE +LE
Sbjct: 158 LYDEGTQNNIARLQTKTVDAEANARLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSN 217
Query: 244 LTL-RQLGFSLTEK---SPDQALLTNFDAVYERMQLEVVR 279
+ + +++ +T++ S Q ++T+FD +YE+ E++R
Sbjct: 218 VDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 257
>ref|NP_393990.1| lipoate protein ligase related protein [Thermoplasma acidophilum
DSM 1728]
sp|Q9HKT1.1|LPLA_THEAC Lipoate-protein ligase A subunit 1 (Lipoate--protein ligase subunit
1)
pdb|2ART|A Chain A, Crystal Structure Of Lipoate-Protein Ligase A Bound With
Lipoyl-Amp
pdb|2ARU|A Chain A, Crystal Structure Of Lipoate-Protein Ligase A Bound With
Atp
pdb|2C7I|A Chain A, Structure Of Protein Ta0514, Putative Lipoate Protein
Ligase From T. Acidophilum.
pdb|2C7I|B Chain B, Structure Of Protein Ta0514, Putative Lipoate Protein
Ligase From T. Acidophilum.
pdb|2C7I|C Chain C, Structure Of Protein Ta0514, Putative Lipoate Protein
Ligase From T. Acidophilum.
pdb|2C7I|D Chain D, Structure Of Protein Ta0514, Putative Lipoate Protein
Ligase From T. Acidophilum.
pdb|2C8M|A Chain A, Structure Of Protein Ta0514, Putative Lipoate Protein
Ligase From T. Acidophilum With Bound Lipoic Acid
pdb|2C8M|B Chain B, Structure Of Protein Ta0514, Putative Lipoate Protein
Ligase From T. Acidophilum With Bound Lipoic Acid
pdb|2C8M|C Chain C, Structure Of Protein Ta0514, Putative Lipoate Protein
Ligase From T. Acidophilum With Bound Lipoic Acid
pdb|2C8M|D Chain D, Structure Of Protein Ta0514, Putative Lipoate Protein
Ligase From T. Acidophilum With Bound Lipoic Acid
emb|CAC11654.1| lipoate protein ligase related protein [Thermoplasma acidophilum]
Length = 262
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 46 QEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIG-----NNGYVPVTRNIGGLAVVA 100
Q ++ IL + R+VI+G YF++A+ E+ NG + R GG AV
Sbjct: 29 QYGDKPILRFYRHDRSVIIG-------YFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYH 81
Query: 101 DDGILNFSLVIPDHFSESISISNAYLIMVDVIRESF 136
D G LNFS+V S+ + I++ + M + + S
Sbjct: 82 DLGDLNFSVV---RSSDDMDITSMFRTMNEAVVNSL 114
>ref|ZP_00951239.1| Secreted protein containing N-terminal
Zinc-dependentcarboxypeptidase related domain
[Croceibacter atlanticus HTCC2559]
gb|EAP86947.1| Secreted protein containing N-terminal
Zinc-dependentcarboxypeptidase related domain
[Croceibacter atlanticus HTCC2559]
Length = 836
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 95 GLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCP 154
G A D+G+L F I + F+ ++S +A + M + + D+Y+ K SY
Sbjct: 334 GHAQETDNGVLTFPFTIRNQFTAALSTLDAAVGMRTELLDYQRDFYKTARSKSTKGSYVF 393
Query: 155 GNFDLSIAGRKFAGIAQRR 173
GN + +G A I +R
Sbjct: 394 GNEKDAASGYHLAEILKRH 412
>ref|YP_001822732.1| putative lipoate-protein ligase [Streptomyces griseus subsp.
griseus NBRC 13350]
dbj|BAG18049.1| putative lipoate-protein ligase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 354
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 53 LHIWPM-TRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVAD-DGILNFSLV 110
L +W + VI+G Q E+ + +G V R GG A+ A+ + +SL
Sbjct: 134 LRVWEWDSPAVIIGSF--QSLRNEVDPAGVERHGVNVVRRISGGGAMFAEPSSTITYSLA 191
Query: 111 IPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIA 170
+P +S +++Y + D + E+ +D IK Y P N D++ K AG A
Sbjct: 192 VPQSLVSGLSFADSYAYLDDWVLEALADM-------GIKAWYQPLN-DIATEVGKIAGAA 243
Query: 171 QRRI 174
Q+R+
Sbjct: 244 QKRV 247
>ref|YP_148273.1| lipoate protein ligase [Geobacillus kaustophilus HTA426]
dbj|BAD76705.1| lipoate protein ligase [Geobacillus kaustophilus HTA426]
Length = 278
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 21/128 (16%)
Query: 73 YFELAKTEIG-----NNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLI 127
YF+ + EI +G V R GG V+ D + +V H + +++ AY +
Sbjct: 53 YFQKVEKEIDLEAVKRHGLGFVRRPTGGRGVLHDKELTYSVIVSESHPAMPKTVTEAYRV 112
Query: 128 MVDVIRESFS----DYY--------QRIEYHEIKNSYC---PGNFDLSIAGRKFAGIAQR 172
+ I E F D Y ++ + +++ C P ++L + GRK AG AQ
Sbjct: 113 ISQGILEGFRYLGLDAYFAVPKTEEEKADLRSPRSAVCFDAPSWYELVVEGRKIAGSAQT 172
Query: 173 RIKKGIVV 180
R +KG+++
Sbjct: 173 R-QKGVIL 179
>ref|YP_154692.1| Lipoate-protein ligase A [Idiomarina loihiensis L2TR]
gb|AAV81143.1| Lipoate-protein ligase A [Idiomarina loihiensis L2TR]
Length = 349
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Query: 89 VTRNIGGLAVVADDG-ILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHE 147
V R GG A+ + G + +SL +P + +SI +Y F D + E
Sbjct: 169 VRRATGGGAMFMEPGNCITYSLTVPTSLVDGMSIEKSY---------EFLDAWVLAALAE 219
Query: 148 --IKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVV 180
IK Y P N D++ A K G AQ+R G+VV
Sbjct: 220 VGIKAYYKPLN-DIASAQGKIGGAAQKRFANGVVV 253
>ref|ZP_02045015.1| hypothetical protein ACTODO_01904 [Actinomyces odontolyticus ATCC
17982]
gb|EDN81427.1| hypothetical protein ACTODO_01904 [Actinomyces odontolyticus ATCC
17982]
Length = 349
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 74 FELAKTEIGNNGY----VPVTRNI-GGLAVVADDG-ILNFSLVIPDHFSESISISNAYLI 127
F+ + EI +G + V+R + GG A+ + G + +SLVIP E +S AY
Sbjct: 149 FQSYQNEIQQDGVDRYGITVSRRVTGGGAMFMEPGNCITYSLVIPTALVEGMSFEQAYPY 208
Query: 128 MVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVV 180
+ + E +E IK Y P N D++ K G AQ+R G +V
Sbjct: 209 LDQWVMEV-------LEKLGIKAKYVPLN-DIASESGKIGGAAQKRWANGYMV 253
>ref|ZP_02084010.1| hypothetical protein CLOBOL_01533 [Clostridium bolteae ATCC
BAA-613]
gb|EDP18179.1| hypothetical protein CLOBOL_01533 [Clostridium bolteae ATCC
BAA-613]
Length = 367
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 17/136 (12%)
Query: 43 TINQEPNQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADD 102
T++ IL++W TV++G + E NGY+ V R GG AV D
Sbjct: 51 TLHVPQGTCILYLWQNRHTVVIGKNQNCWRECRVNFLE-QENGYL-VRRLSGGGAVFHDL 108
Query: 103 GILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIA 162
G LNF+ ++ + +S ++++ +R + H K G D+++
Sbjct: 109 GNLNFTFIVG---AGDYDVSRQLDVILEAVRS--------LGIHAEKT----GRNDITVD 153
Query: 163 GRKFAGIAQRRIKKGI 178
GRKF+G A R G
Sbjct: 154 GRKFSGNAFYRTGDGC 169
>ref|ZP_01189755.1| Lipoyltransferase and lipoate-protein ligase [Halothermothrix
orenii H 168]
gb|EAR78675.1| Lipoyltransferase and lipoate-protein ligase [Halothermothrix
orenii H 168]
Length = 332
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 21/129 (16%)
Query: 49 NQLILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNIGGLAVVADDGILNFS 108
N++IL++W TV++G Q + E + G R GG AV D G LNF+
Sbjct: 32 NEVILYLWQNDNTVVVGR--NQNAWKECRCKLLEEEGGKLARRLSGGGAVYHDLGNLNFT 89
Query: 109 LVIPDHFSESISISNAYLIMVDV--IRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKF 166
++ D + N L V + I FS G DL + G+KF
Sbjct: 90 FLMKDSLYDLKHQLNVILNAVKMAGIEAEFS-----------------GRNDLVVQGKKF 132
Query: 167 AGIAQRRIK 175
+G A + K
Sbjct: 133 SGNAFYKAK 141
>ref|YP_001376126.1| biotin/lipoate A/B protein ligase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gb|ABS23131.1| biotin/lipoate A/B protein ligase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
Length = 278
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 16/115 (13%)
Query: 81 IGNNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFS--- 137
+ Y V R GG V+ D + +V DH +++ AY ++ + E F
Sbjct: 66 VKEKKYGFVRRQTGGRGVLHDKELTYSVIVSEDHPEMPKTVTEAYRVISQGLLEGFKALG 125
Query: 138 -DYYQRIEYHEI--------KNSYC---PGNFDLSIAGRKFAGIAQRRIKKGIVV 180
D Y + E ++ C P +++ + GRK AG AQ R +KG+++
Sbjct: 126 LDAYYAVPKTEADRENLKNPRSGVCFDAPSWYEIVVEGRKIAGSAQTR-QKGVIL 179
>ref|ZP_02911860.1| biotin/lipoate A/B protein ligase [Geobacillus sp. WCH70]
gb|EDT36827.1| biotin/lipoate A/B protein ligase [Geobacillus sp. WCH70]
Length = 278
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 21/128 (16%)
Query: 73 YFELAKTEIG-----NNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLI 127
YF+ + EI +G V R GG V+ D + +V +H +++ AY +
Sbjct: 53 YFQKVEKEIDLEAVKRHGLGFVRRPTGGRGVLHDKELTYSVIVSEEHPDMPKTVTEAYRV 112
Query: 128 MVDVIRESF-----SDYY-------QRIEYHEIKNSYC---PGNFDLSIAGRKFAGIAQR 172
+ I E F + Y+ ++ + +++ C P ++L + GRK AG AQ
Sbjct: 113 ISQGILEGFRFLGLNAYFAVPKTEEEKADLRSPRSAVCFDAPSWYELVVEGRKIAGSAQT 172
Query: 173 RIKKGIVV 180
R +KG+++
Sbjct: 173 R-QKGVIL 179
>ref|YP_001126448.1| Lipoate protein ligase [Geobacillus thermodenitrificans NG80-2]
gb|ABO67703.1| Lipoate protein ligase [Geobacillus thermodenitrificans NG80-2]
Length = 278
Score = 35.4 bits (80), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 73 YFELAKTEIG-----NNGYVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLI 127
YF+ + EI +G V R GG V+ D + +V H +++ AY +
Sbjct: 53 YFQKVEKEIDLEAVKRHGLGFVRRPTGGRGVLHDKELTYSVIVSESHPDMPQTVTEAYRV 112
Query: 128 MVDVIRESFS----DYY--------QRIEYHEIKNSYC---PGNFDLSIAGRKFAGIAQR 172
+ I E F D Y ++ + +++ C P ++L + GRK AG AQ
Sbjct: 113 ISQGILEGFRFLGLDAYFAVPKTEEEKADLRSPRSAVCFDAPSWYELVVEGRKVAGSAQT 172
Query: 173 RIKKGIVV 180
R +KG+++
Sbjct: 173 R-QKGVIL 179
>emb|CAK98639.1| putative lipoate-protein ligase a [Spiroplasma citri]
Length = 314
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Query: 52 ILHIWPMTRTVILGMLDRQLPYFELAKTEIGNNGYVPVTRNI-GGLAVVADDGILNFSLV 110
I +W T+++G + L E V V R I GG AV DDG L FS++
Sbjct: 16 IFFLWKNFNTIVIGQNQNTIEEINLQAVEADK---VNVARRITGGGAVYQDDGNLCFSII 72
Query: 111 IPDHFSESISISNAYLIMVDVIRESFSDYYQRIEYHEIKNSYCPGNFDLSIAGRKFAGIA 170
+ ++ I+ Y + I + + Q++ N+ G D+ I G+K +G A
Sbjct: 73 V----NKDDKIAKNY----ESILQPIINVLQKLGL----NAKFAGKNDIEIDGKKISGNA 120
Query: 171 QRRIK 175
Q + K
Sbjct: 121 QIKYK 125
>ref|YP_001661887.1| lipoyltransferase and lipoate-protein ligase [Thermoanaerobacter
sp. X514]
gb|ABY91551.1| lipoyltransferase and lipoate-protein ligase [Thermoanaerobacter
sp. X514]
Length = 326
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 25/166 (15%)
Query: 87 VPVTRNI-GGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIEY 145
+PV R + GG AV D G LNF+ ++ + S ++DV+R+
Sbjct: 61 IPVVRRLSGGGAVFHDLGNLNFTFIVNEDVSSFSDFKRFTQPIIDVLRKLSV-------- 112
Query: 146 HEIKNSYCPGNFDLSIAGRKFAGIAQRRIKKGIVVS---IYLSVCGDQAARGQLIKDFYE 202
N+ G D++I G+K +G AQ K I+ ++ S D +A ++ +E
Sbjct: 113 ----NAEFSGRNDITIDGKKISGNAQYYYKNRILHHGTLLFSSSITDLSAALKVRPVKFE 168
Query: 203 AGTQGEVTKVNYPQIDPECMATLSELLETPFTVAEVLERLRLTLRQ 248
V+K + +SE L+ P T+ + ++ + +R+
Sbjct: 169 DKGVKSVSK---------RVTNISEHLKEPITIEQFIDLIMNHIRE 205
>ref|YP_585533.1| type II and III secretion system protein [Ralstonia metallidurans
CH34]
gb|ABF10264.1| type II and III secretion system protein [Ralstonia metallidurans
CH34]
Length = 783
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 188 GDQAARGQLIKDFYEAGTQ------GEVTKVNYPQIDPECMATLSELLETPFTVAEVLER 241
G ++ R Q++ +F A + G+ T N+ IDP T++ + E P + A+ LE
Sbjct: 48 GSRSNRDQVVLNFVNADLESVVKAVGQATGKNF-VIDPRVKGTVNLVTEQPVSRAQALET 106
Query: 242 LRLTLRQLGFSLTEKS 257
L LR G+++ + +
Sbjct: 107 LGSVLRMQGYAMVQSN 122
>ref|ZP_00603939.1| Lipoyltransferase and lipoate-protein ligase [Enterococcus faecium
DO]
gb|EAN09741.1| Lipoyltransferase and lipoate-protein ligase [Enterococcus faecium
DO]
Length = 334
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 33/152 (21%)
Query: 34 FVWTEVFLKTINQEPNQLILHIWPMTRTVILGMLDR--------QLPYFELAKTEIGNNG 85
FV E IN Q +L P+ ++L ++ Q E+ + + NG
Sbjct: 3 FVPNENHDPRINLAIEQYLLQEMPLDEPILLFYINEPSIIIGRNQNTLEEINRDYVEENG 62
Query: 86 YVPVTRNIGGLAVVADDGILNFSLVIPDHFSESISISNAYLIMVDVIRESFSDYYQRIE- 144
V R GG AV D G LNFS ++PD +SF D+ + +
Sbjct: 63 IHVVRRLSGGGAVYHDFGNLNFSFIMPDD------------------GDSFRDFAKVTQP 104
Query: 145 ----YHE--IKNSYCPGNFDLSIAGRKFAGIA 170
HE + + G DL I G KF+G A
Sbjct: 105 IIQALHELGVAGAELKGRNDLVIDGMKFSGNA 136
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 10, 2008 4:54 AM
Number of letters in database: 2,222,278,849
Number of sequences in database: 6,515,104
Lambda K H
0.322 0.140 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 6515104
Number of Hits to DB: 1,182,038,652
Number of extensions: 47567808
Number of successful extensions: 111801
Number of sequences better than 10.0: 189
Number of HSP's gapped: 112823
Number of HSP's successfully gapped: 189
Length of query: 283
Length of database: 2,222,278,849
Length adjustment: 132
Effective length of query: 151
Effective length of database: 1,362,285,121
Effective search space: 205705053271
Effective search space used: 205705053271
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)