proteins
1 BUDs| 252 proteins |
E | COG0346 | Lactoylglutathione lyase and related lyases | Help | |
|---|---|---|---|---|---|
| 24 from | query genome Sinorhizobium meliloti (Rhizobiales | Alphaproteobacteria) | ||||
| 1 BUDs | SMa0374 SMa0723 SMa1358 SMa1431 SMa1767 SMa2267 SMb20217 (SMb21013 SMc01550 ) SMb21154 SMb21202 SMc00106 SMc00290 SMc00812 SMc01122 SMc01145 SMc01667 SMc01930 SMc01956_1 SMc01961 SMc01989 SMc02845 SMc02901 SMc04435 | ||||
159 letters (r) 0
0 780 _ ||| 1 SMc03093 (159) COG2764 -2
8 147 _ | 12 RSc0107 (159) COG2764 -18
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= SMc03093
(159 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
SMc03093 305 4e-83
RSc0107 61 8e-10
BH2083 55 7e-08
Rv0887c 54 9e-08
MT0910 54 1e-07
SMa2009 44 1e-04
SMc01148_2 42 4e-04
mlr2640 42 4e-04
SMc01667 38 0.007
SMa0723 36 0.026
RSc2762 36 0.038
AGc4460 35 0.067
NMA2147 33 0.19
NMB0340 33 0.19
MTH1496 33 0.26
SMb21154 33 0.31
SMc04054 32 0.49
BMEII0784 32 0.72
HI0323 31 0.85
BH3305 31 1.0
alr2321 31 1.1
PA2546 31 1.2
STM1435 31 1.2
AGc3564 30 1.6
MJ1160 30 1.6
alr7163 30 1.9
BMEII0415 30 2.1
mll8574 30 2.4
all2721 30 2.6
Cgl2760 30 2.7
SMa1848 30 2.8
slr0381 30 2.9
mlr7891 29 4.3
RSc2788 29 4.4
AGc1564 29 5.0
MK0582 28 6.0
MT3673 28 7.5
Rv3568c 28 7.5
# >SMc03093
# Length = 159
#
# Score = 305 bits (780), Expect = 4e-83
# Identities = 159/159 (100%), Positives = 159/159 (100%)
#
# Query: 1 MASYSGGPSVRQICIKLFVRHGDEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSV 60
# MASYSGGPSVRQICIKLFVRHGDEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSV
# Sbjct: 1 MASYSGGPSVRQICIKLFVRHGDEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSV 60
#
# Query: 61 FRVAGANPRRDAEPRLGGPRSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETL 120
# FRVAGANPRRDAEPRLGGPRSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETL
# Sbjct: 61 FRVAGANPRRDAEPRLGGPRSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETL 120
#
# Query: 121 PTGDRVGALIDPFGHIWALFTATNESEALDAFGVDRNAA 159
# PTGDRVGALIDPFGHIWALFTATNESEALDAFGVDRNAA
# Sbjct: 121 PTGDRVGALIDPFGHIWALFTATNESEALDAFGVDRNAA 159
#
#
# >RSc0107
# Length = 159
#
# Score = 61.2 bits (147), Expect = 8e-10
# Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
#
# Query: 25 ERAIAFYRDVLGA-ELLQRHEWSGILTSADLCIGDSVFRVAGANPRRDAEPRLGGPRSPH 83
# ++A+ FY+ GA E+++ +G + A++ IGDS +A P SP
# Sbjct: 23 DKALDFYKQAFGATEIMRMAGPNGAIAHAEIRIGDSPVMMADEMPNMSCA-------SPD 75
#
# Query: 84 ALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIWALFT 141
# L +T+ L ++V DVD V A+ GA+ + GDR G L DPFGH+W + T
# Sbjct: 76 TLQSTSVGLMIYVKDVDAVFANAIKTGATEVRPVQNQFYGDRSGTLKDPFGHVWTIST 133
#
#
# >BH2083
# Length = 105
#
# Score = 54.7 bits (130), Expect = 7e-08
# Identities = 38/114 (33%), Positives = 57/114 (49%), Gaps = 16/114 (14%)
#
# Query: 25 ERAIAFYRDVLGAELLQRH-EWSGILTSADLCIGDSVFRVAGANPRRDAEPRLGGPRSPH 83
# E+ + F ++V AE + R G + A++ IG+SV + A P P +P
# Sbjct: 7 EQLLTFVKEVFQAEEIDRFTNEDGSIGHAEVRIGNSVIMMFDAKPE--------WPDTP- 57
#
# Query: 84 ALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIW 137
# L +V+D D+V E+A+ AGA+ L GDRVG + DPFG+IW
# Sbjct: 58 ------CFLRFYVEDGDKVFEQALKAGATPVTELTELFFGDRVGRVKDPFGNIW 105
#
#
# >Rv0887c
# Length = 152
#
# Score = 54.3 bits (129), Expect = 9e-08
# Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
#
# Query: 71 DAEPRLGGPRS--PHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGA 128
# D P++ G +S P +LG T + L V DVD +RA+ AGA++ E GDR G
# Sbjct: 60 DDVPQMCGGKSMTPTSLGGTPVTIHLTVTDVDAKFQRALNAGATVVTALEDQLWGDRYGV 119
#
# Query: 129 LIDPFGHIWAL 139
# + DPFGH W+L
# Sbjct: 120 VADPFGHHWSL 130
#
#
# >MT0910
# Length = 170
#
# Score = 54.3 bits (129), Expect = 1e-07
# Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
#
# Query: 71 DAEPRLGGPRS--PHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGA 128
# D P++ G +S P +LG T + L V DVD +RA+ AGA++ E GDR G
# Sbjct: 78 DDVPQMCGGKSMTPTSLGGTPVTIHLTVTDVDAKFQRALNAGATVVTALEDQLWGDRYGV 137
#
# Query: 129 LIDPFGHIWAL 139
# + DPFGH W+L
# Sbjct: 138 VADPFGHHWSL 148
#
#
# >SMa2009
# Length = 149
#
# Score = 43.9 bits (102), Expect = 1e-04
# Identities = 42/115 (36%), Positives = 52/115 (44%), Gaps = 9/115 (7%)
#
# Query: 27 AIAFYRDVLGAELLQR--HEWSGILTSADLCIGDSVFRVAGANPRRDAEPRLGGPRSPHA 84
# AI FY GAE L R G + A+L IG+S +A D P G SP
# Sbjct: 20 AIDFYGRAFGAEELFRMTDPRDGRIGHAELKIGESTVMIA------DEYPDFGA-LSPDT 72
#
# Query: 85 LGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIWAL 139
# +G + L VD L RA+ AGA A G+RV ++DPFGH W L
# Sbjct: 73 IGGSPVTFHLATLAVDADLARAVDAGAVALRAAADQGYGERVAMVVDPFGHRWML 127
#
#
# >SMc01148_2
# Length = 127
#
# Score = 42.4 bits (98), Expect = 4e-04
# Identities = 42/125 (33%), Positives = 49/125 (38%), Gaps = 12/125 (9%)
#
# Query: 23 DEERAIAFYRDVLGA-ELLQRHEWSGI-LTSADLCIGDSVFRVAGANPRRDAEPRLGGPR 80
# D + A AFY GA E ++H G L L I GA D P G P
# Sbjct: 11 DADAAAAFYVRAFGAKEEDRKHAQDGKRLIHCHLTIN------GGALMLNDPFPEFGHPW 64
#
# Query: 81 SPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIWALF 140
# P +L L VDD D RA+ AGA + E GD G L DPFG W +
# Sbjct: 65 KP----PEGFVLHLVVDDADFWWNRAVEAGAEVTMPLEIAFWGDHYGQLRDPFGVTWGIV 120
#
# Query: 141 TATNE 145
# E
# Sbjct: 121 APVKE 125
#
#
# >mlr2640
# Length = 140
#
# Score = 42.4 bits (98), Expect = 4e-04
# Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
#
# Query: 26 RAIAFYRDVLGAELLQRH--EWSGILTSADLCIGDSVFRVAGANPRRDAEPRLGGPRSPH 83
# +A FY+ GAE + + + G L I S + DA P G P
# Sbjct: 28 KAADFYKKAFGAEQVFAYPADEKGRTMHIHLHINGSTLMLG------DAYPEHGHPHKA- 80
#
# Query: 84 ALGTTAAILELHVD--DVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIWAL 139
# A G T L+LH+D D+D +RA+ AG + + + GDR G L DPFG WA+
# Sbjct: 81 AQGYT---LQLHLDDGDIDFWWQRAVDAGCEVVTPLQVMFWGDRWGQLNDPFGVAWAM 135
#
#
# >SMc01667
# Length = 120
#
# Score = 38.1 bits (87), Expect = 0.007
# Identities = 42/128 (32%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
#
# Query: 9 SVRQICIKLFVRHGDEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSVFRVAGANP 68
# +VR+I L V D +A FY D+LG E++ H W I+T F G
# Sbjct: 2 TVRRIVPNLQV--SDPLQAHRFYADLLGMEVVMDHGW--IVT----------FAAVG--- 44
#
# Query: 69 RRDAEPRLGGPRSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGA 128
# R A P++ + GT L + VDDVD RA AG + G R
# Sbjct: 45 -RTAMPQVSFA-TEGGSGTPVPALSIEVDDVDETYRRAAAAGVEIVYDITDESWGVRRFF 102
#
# Query: 129 LIDPFGHI 136
# L DPFG+I
# Sbjct: 103 LRDPFGNI 110
#
#
# >SMa0723
# Length = 262
#
# Score = 36.2 bits (82), Expect = 0.026
# Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
#
# Query: 23 DEERAIAFYRDVLGAE---LLQRHEWSGILTSADLCIGDSVFRVAGANPRRDAEPRLGGP 79
# D ER++AFYRD LG ++ R G + DL G V A +D G
# Sbjct: 129 DLERSLAFYRDGLGLHTPGIVGREFEHGAVAFFDLSNG-----VKLAIWDQDDLAHDSGL 183
#
# Query: 80 RSPHALGTTAAILE--LHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIW 137
# A T+ +I +VD V+E+A AGA++ A+ G G DP GH+W
# Sbjct: 184 TKAPASSTSFSIGHNVSQRSEVDEVMEQAREAGAAIVKPAQETFYGGYAGYFTDPDGHLW 243
#
# Query: 138 AL 139
# +
# Sbjct: 244 EI 245
#
#
# >RSc2762
# Length = 141
#
# Score = 35.8 bits (81), Expect = 0.038
# Identities = 34/120 (28%), Positives = 48/120 (39%), Gaps = 10/120 (8%)
#
# Query: 23 DEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSV---FRVAGANPRRDAEPRLGGP 79
# D AIAFYRD G + G ++ + F GA P GG
# Sbjct: 20 DAAAAIAFYRDAFGFGVQDAVHDHGRPIHVEMTYQGQLILMFAPNGAFGSTARAPAAGGF 79
#
# Query: 80 RSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIWAL 139
# P + L+ +DVD V RA+ GA+ + + G+R A+ DP G+ W L
# Sbjct: 80 ECPQS-------FHLYCEDVDAVYRRALEHGATSIMPPDNVFWGERYAAVRDPDGYRWGL 132
#
#
# >AGc4460
# Length = 131
#
# Score = 35.0 bits (79), Expect = 0.067
# Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 15/99 (15%)
#
# Query: 15 IKLFVRHGDEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSVFRVAGANPRRDAEP 74
# I VR DE+R++ FY+ G E+ +R E+ ++ + +N D E
# Sbjct: 5 IHSMVRVLDEKRSVEFYKQAFGLEIAERAEF------------ENFTLIYLSNAEGDFEL 52
#
# Query: 75 RLGGPRS---PHALGTTAAILELHVDDVDRVLERAMGAG 110
# L R+ P+ALG L + V DVD +R +G G
# Sbjct: 53 ELTVNRAREVPYALGDGYGHLAVSVADVDAEHQRFIGIG 91
#
#
# >NMA2147
# Length = 138
#
# Score = 33.5 bits (75), Expect = 0.19
# Identities = 34/120 (28%), Positives = 54/120 (44%), Gaps = 11/120 (9%)
#
# Query: 19 VRHGDEERAIAFYRDVLGAELLQRHEW-SGILTSADLCIGDSV-FRVAGANPRRDAEPRL 76
# +R G+ E+++ FY++VLG +LL+R ++ G T A + GD V D E
# Sbjct: 8 LRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTE--- 64
#
# Query: 77 GGPRSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALI-DPFGH 135
# + LG + + VDD ER G ++ A + G V A + DP G+
# Sbjct: 65 -----RYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGY 119
#
#
# >NMB0340
# Length = 138
#
# Score = 33.5 bits (75), Expect = 0.19
# Identities = 34/120 (28%), Positives = 54/120 (44%), Gaps = 11/120 (9%)
#
# Query: 19 VRHGDEERAIAFYRDVLGAELLQRHEW-SGILTSADLCIGDSV-FRVAGANPRRDAEPRL 76
# +R G+ E+++ FY++VLG +LL+R ++ G T A + GD V D E
# Sbjct: 8 LRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTE--- 64
#
# Query: 77 GGPRSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALI-DPFGH 135
# + LG + + VDD ER G ++ A + G V A + DP G+
# Sbjct: 65 -----RYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGY 119
#
#
# >MTH1496
# Length = 454
#
# Score = 33.1 bits (74), Expect = 0.26
# Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 26/119 (21%)
#
# Query: 6 GGPSVRQICIKLFVRHGDEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSVFRVAG 65
# G +R+I + ++ +E + +Y+ L A L R E +G+L+ D+ G +V
# Sbjct: 332 GSEVLRRIHMGSYISQ--KELSGKYYKRALQARSLIRREITGLLSHVDIIAGPTV----- 384
#
# Query: 66 ANPRRDAEPRLGGPRSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGD 124
# P+ PH LG +E++ DV V+ G A+ ++P GD
# Sbjct: 385 -------------PKLPHTLGEELEPMEMYAYDVLTVIANLAGIPAA------SIPAGD 424
#
#
# >SMb21154
# Length = 127
#
# Score = 32.7 bits (73), Expect = 0.31
# Identities = 39/121 (32%), Positives = 51/121 (41%), Gaps = 15/121 (12%)
#
# Query: 23 DEERAIAFYRDVLGAELLQRH--EWSGILTSADLCIGDSVFRVAGANPRRDAE-PRLGGP 79
# D + A+ +Y LG LL H ++ + A + AG P D E P GG
# Sbjct: 14 DVDSAVEWYTKHLGFSLLSNHAPAFADVRRGALRLLLSGPLSSAG-RPMPDGERPSPGGW 72
#
# Query: 80 RSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIWAL 139
# H L VDD+ +ER AG RN T P G ++ LIDP G+I L
# Sbjct: 73 NRIH----------LIVDDLAVEVERLRAAGVRFRNDVVTGPGGSQI-LLIDPSGNIVEL 121
#
# Query: 140 F 140
# F
# Sbjct: 122 F 122
#
#
# >SMc04054
# Length = 253
#
# Score = 32.0 bits (71), Expect = 0.49
# Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 12/123 (9%)
#
# Query: 23 DEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSVFRVAGANPRRDAEPRLGGPRSP 82
# D + A AFY+D++G R + L GD +VAG + + P P
# Sbjct: 14 DMKAAEAFYKDIVGWS--ARDAGMPGMNYTLLSAGDH--QVAGLMTMPEGALDMQIP--P 67
#
# Query: 83 HALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIWALFTA 142
# LG A VDDVD + G ++ E +P R + DP G +ALF
# Sbjct: 68 AWLGYIA------VDDVDESAAKLAAEGGTVHRAPEDIPNIGRFAIVTDPHGAAFALFRG 121
#
# Query: 143 TNE 145
# E
# Sbjct: 122 DGE 124
#
#
#
# Score = 28.9 bits (63), Expect = 4.7
# Identities = 27/118 (22%), Positives = 47/118 (38%), Gaps = 14/118 (11%)
#
# Query: 22 GDEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSVFRVAGANPRRDAEPRLGGPRS 81
# GD + A +FY + G Q + + V+++ N +P G
# Sbjct: 145 GDLDTAFSFYSKLFGWTKDQAMDMGEM----------GVYQIFAHN----GQPIGGMMTR 190
#
# Query: 82 PHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIWAL 139
# P + + +V+ +D ++RA GA L +P G + IDP G ++AL
# Sbjct: 191 PREVPNPFWLYYFNVEAIDAAIDRAQSGGAKLLMGPMEVPGGAWIAQFIDPQGALFAL 248
#
#
# >BMEII0784
# Length = 259
#
# Score = 31.6 bits (70), Expect = 0.72
# Identities = 17/58 (29%), Positives = 26/58 (44%)
#
# Query: 96 VDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIWALFTATNESEALDAFG 153
# V DVD E+ M G + A +P R DP G +++L++ + E FG
# Sbjct: 80 VADVDAAAEKVMAEGGKILRAAGDIPGVGRFAVAADPQGAVFSLYSPKADMEPPADFG 137
#
#
# >HI0323
# Length = 135
#
# Score = 31.2 bits (69), Expect = 0.85
# Identities = 14/26 (53%), Positives = 19/26 (72%)
#
# Query: 19 VRHGDEERAIAFYRDVLGAELLQRHE 44
# +R GD +R+I FY+DVLG LL+ E
# Sbjct: 8 LRVGDLDRSIKFYQDVLGMRLLRTSE 33
#
#
# >BH3305
# Length = 286
#
# Score = 31.2 bits (69), Expect = 1.0
# Identities = 12/33 (36%), Positives = 23/33 (69%)
#
# Query: 19 VRHGDEERAIAFYRDVLGAELLQRHEWSGILTS 51
# ++ D RA+ FY++++G ++L+R E S LT+
# Sbjct: 16 IKVSDLSRALTFYQEIIGFQVLERSERSATLTA 48
#
#
# >alr2321
# Length = 145
#
# Score = 30.8 bits (68), Expect = 1.1
# Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 13/131 (9%)
#
# Query: 19 VRHGDEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSVFRVAGANPRRD---AEPR 75
# +R G+ E ++ FY DVLG +LL++ ++ G G+ G D E
# Sbjct: 8 LRVGNLEESLKFYCDVLGMKLLRKKDYPG---------GEFTLAFIGYGDESDNTVIELT 58
#
# Query: 76 LGGPRSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALI-DPFG 134
# + LG + L VDD+ E G + + G V A + DP G
# Sbjct: 59 YNWGVEKYELGNAYGHIALGVDDIYATCESIKTQGGKVVREPGPMKHGSTVIAFVEDPDG 118
#
# Query: 135 HIWALFTATNE 145
# + L +N+
# Sbjct: 119 YKIELIQLSNQ 129
#
#
# >PA2546
# Length = 143
#
# Score = 30.8 bits (68), Expect = 1.2
# Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
#
# Query: 17 LFVRHGDEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSV 60
# + +R D ER+IAFYRDVLG +++ W L A L +G S+
# Sbjct: 14 IVLRVRDLERSIAFYRDVLGCVVVK---WRDDLELAHLRLGTSM 54
#
#
# >STM1435
# Length = 135
#
# Score = 30.8 bits (68), Expect = 1.2
# Identities = 14/26 (53%), Positives = 20/26 (76%)
#
# Query: 19 VRHGDEERAIAFYRDVLGAELLQRHE 44
# +R GD +R+IAFY +VLG +LL+ E
# Sbjct: 8 LRVGDLQRSIAFYTNVLGMKLLRTSE 33
#
#
# >AGc3564
# Length = 116
#
# Score = 30.4 bits (67), Expect = 1.6
# Identities = 34/111 (30%), Positives = 44/111 (39%), Gaps = 18/111 (16%)
#
# Query: 26 RAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSVFRVAGANPRRDAEPRLGGPRSPHAL 85
# RA AFY D+LG + H W I+T A + A R GG
# Sbjct: 17 RAQAFYGDILGMPVAMDHGW--IVTHASPLEAHAQVSFA----------REGGS------ 58
#
# Query: 86 GTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHI 136
# GT L + VD+ D V R + AG + T G + L DPFG +
# Sbjct: 59 GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKL 109
#
#
# >MJ1160
# Length = 434
#
# Score = 30.4 bits (67), Expect = 1.6
# Identities = 28/125 (22%), Positives = 49/125 (38%), Gaps = 31/125 (24%)
#
# Query: 7 GPSVRQICIKLFVRH-------GDEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDS 59
# G + ++C + +R +E + +Y++ L A L R+E I+ D+ +G +
# Sbjct: 302 GYKIEEVCGEEVLRRIMIGSMISQKEYSGKYYKNALKARNLMRNEMIKIMKDVDIIVGAT 361
#
# Query: 60 VFRVAGANPRRDAEPRLGGPRSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAET 119
# V P+ PH LG +E++ DV V G A +
# Sbjct: 362 V------------------PKLPHKLGEKLTPMEMYSYDVLTVPANICGLCAGV------ 397
#
# Query: 120 LPTGD 124
# +P GD
# Sbjct: 398 VPCGD 402
#
#
# >alr7163
# Length = 149
#
# Score = 30.0 bits (66), Expect = 1.9
# Identities = 28/95 (29%), Positives = 45/95 (46%), Gaps = 15/95 (15%)
#
# Query: 47 GILTSADLCIGDSVFRVAGANPRRDAEPRLGGPRSPHALGTTAAILELHVDDVDRVLERA 106
# G + +A++ IGDSV ++ A R + +P P S + L+V++ D + A
# Sbjct: 46 GSIMNAEVKIGDSVIMLSEA--RCEFKPM---PSS----------IYLYVENTDTTYDNA 90
#
# Query: 107 MGAGASLRNVAETLPTGDRVGALIDPFGHIWALFT 141
# + AGA GDR A+ DP G+ W + T
# Sbjct: 91 LKAGAISMMQPNDEFWGDRHAAVKDPNGNYWWIAT 125
#
#
# >BMEII0415
# Length = 117
#
# Score = 30.0 bits (66), Expect = 2.1
# Identities = 31/92 (33%), Positives = 39/92 (41%), Gaps = 20/92 (21%)
#
# Query: 23 DEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSVFRVAGANPRRDAEPRLG-GPRS 81
# D A FY D+LG ++ W I+T A DAE R+ S
# Sbjct: 14 DPAAARRFYGDLLGLDVAMDFGW--IVTYAG-----------------DAEARVQVSVMS 54
#
# Query: 82 PHALGTTAAILELHVDDVDRVLERAMGAGASL 113
# GT L + VDDVD VLERA+ G S+
# Sbjct: 55 EGGAGTPVPDLSIEVDDVDAVLERAIALGFSI 86
#
#
# >mll8574
# Length = 147
#
# Score = 30.0 bits (66), Expect = 2.4
# Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 13/122 (10%)
#
# Query: 23 DEERAIAFYRDVLGAELLQRHEWSGILTSADLCIG----DSVFRVAGANPRRDAEPRLGG 78
# D ER +AFY D LG L +R E + + D + + AG + +L
# Sbjct: 20 DIERTVAFYVDKLGFRLRRRAEGFADFHGEGVTLAAWEIDHIGQHAGVS-------KLRS 72
#
# Query: 79 PRSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIWA 138
# PR HA A+ D++DR+ G E R DP +W
# Sbjct: 73 PR--HAHKVCVAVQLDAPDEIDRLHAELTAKGVPFYGPPENYVWNARCAYFTDPDDTLWE 130
#
# Query: 139 LF 140
# L+
# Sbjct: 131 LY 132
#
#
# >all2721
# Length = 247
#
# Score = 29.6 bits (65), Expect = 2.6
# Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
#
# Query: 23 DEERAIAFYRD-VLGAELLQRHEWSGILTSADLCIGDSVFRVAGANPRRDAEPRLGGPRS 81
# D E+A AFYRD V + L + W LTS D IGD++ VA + R + GG
# Sbjct: 55 DWEKATAFYRDKVRESYLFELGAWH--LTSQDY-IGDTLRLVADYSQGRVLD--FGGGIG 109
#
# Query: 82 PHALG 86
# HA+G
# Sbjct: 110 THAIG 114
#
#
# >Cgl2760
# Length = 138
#
# Score = 29.6 bits (65), Expect = 2.7
# Identities = 35/129 (27%), Positives = 53/129 (40%), Gaps = 20/129 (15%)
#
# Query: 21 HGDEERAIAFYRDVLGAELLQRHEWSGI------------LTSADLCIGDSVFRVAGANP 68
# +G+ + A+ FY+ V G E LQ +S + + A+L + A P
# Sbjct: 12 NGNAKEAMEFYQTVFGGE-LQMMPFSAMHSEEEVGGDGEKIMHAELVVDGQKLLFASDIP 70
#
# Query: 69 RRDAEPRLGGPRSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGA 128
# R R+ G +P +L T A LE + R + G ++ E +P G GA
# Sbjct: 71 R--VMQRMKGEDTPLSL-TGGAELEEEI----RGYWEKLSEGGTVTMPLEAVPWGAVYGA 123
#
# Query: 129 LIDPFGHIW 137
# L D FG W
# Sbjct: 124 LEDRFGTHW 132
#
#
# >SMa1848
# Length = 484
#
# Score = 29.6 bits (65), Expect = 2.8
# Identities = 23/86 (26%), Positives = 35/86 (39%), Gaps = 14/86 (16%)
#
# Query: 78 GPRSPHALGTTAAILELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALI------- 130
# GP + + I E +D +DR +E A+ GA L ++P G + A I
# Sbjct: 319 GPGTEPGIAIGPMINEAAIDKIDRHVEDAIAKGAKLAARGRSVPEGRQYTAPIVLTGATT 378
#
# Query: 131 -------DPFGHIWALFTATNESEAL 149
# + FG + LF E EA+
# Sbjct: 379 DMLLASEETFGPVAPLFRFETEDEAI 404
#
#
# >slr0381
# Length = 131
#
# Score = 29.6 bits (65), Expect = 2.9
# Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
#
# Query: 19 VRHGDEERAIAFYRDVLGAELLQRHEW-SGILTSA 52
# +R GD ++++ FY D+LG LL++ ++ SG T A
# Sbjct: 8 IRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLA 42
#
#
# >mlr7891
# Length = 140
#
# Score = 28.9 bits (63), Expect = 4.3
# Identities = 15/40 (37%), Positives = 21/40 (52%)
#
# Query: 98 DVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIW 137
# +VD V+ +A+ AGA L A+ G G DP H+W
# Sbjct: 89 EVDAVMAQAISAGARLVKPAQKTFWGGYAGYFQDPDDHLW 128
#
#
# >RSc2788
# Length = 298
#
# Score = 28.9 bits (63), Expect = 4.4
# Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
#
# Query: 92 LELHVDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDP 132
# LE HV +R L+ G+G L VA+ L TG+ VG IDP
# Sbjct: 159 LEQHVQPGERTLDYGCGSGI-LAIVAKKLGTGETVGVDIDP 198
#
#
# >AGc1564
# Length = 291
#
# Score = 28.9 bits (63), Expect = 5.0
# Identities = 13/46 (28%), Positives = 22/46 (47%)
#
# Query: 96 VDDVDRVLERAMGAGASLRNVAETLPTGDRVGALIDPFGHIWALFT 141
# VDDVD + G ++R + +P R + DP+G + + T
# Sbjct: 110 VDDVDATAKLFADKGGAIRRPPQDIPEIGRFAVVADPYGAVLCIMT 155
#
#
# >MK0582
# Length = 282
#
# Score = 28.5 bits (62), Expect = 6.0
# Identities = 14/28 (50%), Positives = 17/28 (60%)
#
# Query: 97 DDVDRVLERAMGAGASLRNVAETLPTGD 124
# D+V+RV ERA AG NV +P GD
# Sbjct: 202 DEVERVAERAADAGFHAMNVIPLIPGGD 229
#
#
# >MT3673
# Length = 300
#
# Score = 28.1 bits (61), Expect = 7.5
# Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
#
# Query: 23 DEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSVFRVAGANPRRDAEPRLGGPRSP 82
# D+ A+ FYRDVLG L + + R G NPR + L P S
# Sbjct: 152 DDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMPTSS 211
#
# Query: 83 HALGTTAAILEL-HVDDVDRVLERAM 107
# G ++E+ DDV L+RA+
# Sbjct: 212 ---GIVHLMVEVEQADDVGLCLDRAL 234
#
#
# >Rv3568c
# Length = 300
#
# Score = 28.1 bits (61), Expect = 7.5
# Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
#
# Query: 23 DEERAIAFYRDVLGAELLQRHEWSGILTSADLCIGDSVFRVAGANPRRDAEPRLGGPRSP 82
# D+ A+ FYRDVLG L + + R G NPR + L P S
# Sbjct: 152 DDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMPTSS 211
#
# Query: 83 HALGTTAAILEL-HVDDVDRVLERAM 107
# G ++E+ DDV L+RA+
# Sbjct: 212 ---GIVHLMVEVEQADDVGLCLDRAL 234
#
#
Database: myva
Posted date: Sep 16, 2002 2:25 PM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.321 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,974,641
Number of Sequences: 192987
Number of extensions: 768817
Number of successful extensions: 2081
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 2043
Number of HSP's gapped (non-prelim): 62
length of query: 159
length of database: 59,019,183
effective HSP length: 101
effective length of query: 58
effective length of database: 39,527,496
effective search space: 2292594768
effective search space used: 2292594768
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
S2: 61 (28.1 bits)