Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss422491	KWOK|OVLP-000621-303382		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	06/30/00	10/10/03	79	Genomic			99 %
ss642365	SC_JCM|AL138928.3_88005		rev/B	C/T	atttcattgattttggctttatcagccgga	aaatggaggtaagtttaaagctaatggatc	07/27/00	05/28/04	85	Genomic			unknown
ss2023376	KWOK|OVLP-000925-619289		rev/B	C/T	atttcattgattttggctttatcagccgga	aaatggaggtaagtttaaagctaatggatc	10/06/00	10/10/03	87	Genomic			99 %
ss2023531	KWOK|OVLP-000925-620181		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	10/06/00	10/10/03	87	Genomic			99 %
ss12998198	SC_SNP|NT_004487.15_16029812		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	10/22/03	10/31/03	119	Genomic			unknown
ss16432646	CSHL-HAPMAP|CSHL-HuAA-200402.chr1.NT_004487.16_16285272		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	02/17/04	03/04/04	120	Genomic			unknown
ss20514380	SSAHASNP|WGSA-200403-chr1.chr1.NT_004487.16_16285272		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	03/18/04	03/18/04	121	Genomic			unknown
ss23189076	PERLEGEN|afd1142712		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	08/10/04	09/13/04	123	Genomic			unknown
ss43987489	ABI|hCV910453		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	07/18/05	11/03/06	126	Genomic			unknown
ss66584699	ILLUMINA|HumanHap300v1.1_rs330749		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	11/09/06	11/09/06	127	Genomic			unknown
ss67293889	ILLUMINA|HumanHap550v1.1_rs330749		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	11/14/06	11/14/06	127	Genomic			unknown
ss67697840	ILLUMINA|HumanHap650Yv1.0_rs330749		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	11/14/06	11/14/06	127	Genomic			unknown
ss70772496	ILLUMINA|HumanHap550v3.0__rs330749		rev/B	C/T	atttcattgattttggctttatcagccgga	aaatggaggtaagtttaaagctaatggatc	04/20/07	03/30/08	130	Genomic			unknown
ss71347989	ILLUMINA|HumanHap650Yv3.0_rs330749		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	04/23/07	04/23/07	127	Genomic			unknown
ss74918627	ILLUMINA|ILMN_Human_1M_rs330749		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	08/28/07	08/29/07	129	Genomic			unknown
ss79160806	ILLUMINA|HumanHap300v2.0_rs330749		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	04/18/07	11/18/07	130	Genomic			unknown
ss81281528	HGSV|Cor18507_SNV_20070510.chr1_183968821		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	11/26/07	11/29/07	130	Genomic			unknown
ss83429392	KRIBB_YJKIM|KHS459558		fwd/T	A/G	gatccattagctttaaacttacctccattt	tccggctgataaagccaaaatcaatgaaat	12/04/07	12/05/07	130	Genomic			unknown

Fasta sequence   (Legend)

 GACTGTGATT AATGTGGACA GATTGACCTG TTTCAATATT TAGTGTGGAT CAGAAGGGTG
 CATTATCACA ATGTCTTATG AGCAAATGAC TCAAGCTGGA CATGGATAAA AGATTTTAAT
 TAAGGAGATA ATCATTAAGG AACATCTCCT ACTACTTCCT TTCTCTGGTA ACAAATGCTG
 CCCTCCAACC TGAGCCTTAG GCTGCCTTTC CCTCCAGTGT TTTGAATGTT GGCATCTAAG
 GAACAGTGGA ATGGGAAATA TTTCTTTGAA GATCCATTAG CTTTAAACTT ACCTCCATTT
 R
 TCCGGCTGAT AAAGCCAAAA TCAATGAAAT TGGAGAGCAT TCCTTAAAGG GCTGTTTGTT
 TACTCATACT TCTGGCTGTG GAGATGACTT ACAGGACAGA TGGAGACCAA GTTAGGTTAG
 AAGTGCTTAA TATTGGGTTG TACTGTCTGC ATTCAATATG AACTTGTGTA AGGTAGTTGT
 GAGGTTGTGT TCAAGGTTTT TCACTATAGC ATAAGGAAAG GAAAAAAACC TAATATAACA
 AACCTCAGAT CTTACCTATA AAATTATGTT ATTTGCAAGG TAAGAATATT GTTATCTAAT

GeneView

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	A/A	A/G	G/G	HWP	A	G
ss23189076	AFD_EUR_PANEL	European	48	IG	0.583	0.333	0.083	0.655	0.750	0.250
	AFD_AFR_PANEL	African American	44	IG	0.500	0.455	0.045	0.527	0.727	0.273
	AFD_CHN_PANEL	Asian	46	IG	0.913	0.087		1.000	0.957	0.043
ss43987489	HapMap-CEU	European	120	IG	0.450	0.500	0.050	0.150	0.700	0.300
	HapMap-HCB	Asian	90	IG	0.711	0.289		0.273	0.856	0.144
	HapMap-JPT	Asian	88	IG	0.795	0.205		0.479	0.898	0.102
	HapMap-YRI	Sub-Saharan African	120	IG	0.450	0.450	0.100	1.000	0.675	0.325

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
Validated by: PERLEGEN	UNKNOWN	UNKNOWN	UNKNOWN