LOCUS       NP_405269                815 aa            linear   BCT 20-JUL-2008
DEFINITION  outer membrane usher protein [Yersinia pestis CO92].
ACCESSION   NP_405269
VERSION     NP_405269.1  GI:16121956
DBSOURCE    REFSEQ: accession NC_003143.1
KEYWORDS    .
SOURCE      Yersinia pestis CO92
  ORGANISM  Yersinia pestis CO92
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
            Enterobacteriaceae; Yersinia.
REFERENCE   1  (residues 1 to 815)
  AUTHORS   Delihas,N.
  TITLE     Annotation and evolutionary relationships of a small regulatory RNA
            gene micF and its target ompF in Yersinia species
  JOURNAL   BMC Microbiol. 3, 13 (2003)
   PUBMED   12834539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 815)
  AUTHORS   Parkhill,J., Wren,B.W., Thomson,N.R., Titball,R.W., Holden,M.T.G.,
            Prentice,M.B., Sebaihia,M., James,K.D., Churcher,C., Mungall,K.L.,
            Baker,S., Basham,D., Bentley,S.D., Brooks,K., Cerdeno-Tarraga,A.M.,
            Chillingworth,T., Cronin,A., Davies,R.M., Davis,P., Dougan,G.,
            Feltwell,T., Hamlin,N., Holroyd,S., Jagels,K., Leather,S.,
            Karlyshev,A.V., Moule,S., Oyston,P.C.F., Quail,M., Rutherford,K.,
            Simmonds,M., Skelton,J., Stevens,K., Whitehead,S. and Barrell,B.G.
  TITLE     Genome sequence of Yersinia pestis, the causative agent of plague
  JOURNAL   Nature 413 (6855), 523-527 (2001)
   PUBMED   11586360
REFERENCE   3  (residues 1 to 815)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2001) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   4  (residues 1 to 815)
  AUTHORS   Parkhill,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2001) Submitted on behalf of the Yersinia
            sequencing team, Sanger Centre, Wellcome Trust Genome Campus,
            Hinxton, Cambridge CB10 1SA E-mail: parkhill@sanger.ac.uk
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CAC90516.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Yersinia pestis CO92"
                     /strain="CO92"
                     /db_xref="taxon:214092"
                     /biovar="Orientalis"
     Protein         1..815
                     /product="outer membrane usher protein"
                     /calculated_mol_wt=89733
     Region          50..815
                     /region_name="FimD"
                     /note="P pilus assembly protein, porin PapC [Cell motility
                     and secretion / Intracellular trafficking and secretion];
                     COG3188"
                     /db_xref="CDD:33001"
     Region          52..801
                     /region_name="Usher"
                     /note="Fimbrial Usher protein; pfam00577"
                     /db_xref="CDD:109627"
     CDS             1..815
                     /locus_tag="YPO1696"
                     /coded_by="complement(NC_003143.1:1933288..1935735)"
                     /note="Similar to Escherichia coli outer membrane usher
                     protein AfaC precursor SW:AFAC_ECOLI (P53517) (859 aa)
                     fasta scores: E(): 1.4e-13, 22.7% id in 631 aa and
                     Pseudomonas aeruginosa hypothetical protein Pa4652
                     TR:AAG08039 (EMBL:AE004879) (790 aa) fasta scores: E(): 0,
                     42.9% id in 805 aa"
                     /transl_table=11
                     /db_xref="GeneID:1174533"
ORIGIN      
        1 miirfrlppl svliygsill pslipltilg gslpppstst tmpdttlyle lvvndrnfgs
       61 tvpisyrnnr yylsqsqlrt iglpisepla peiaidnmag vnvkydgenq rllinvpsew
      121 lpkqqievte qddfnlaqss lgalfnydiy atqgypyssl thfsawteqr ifdrfgllsn
      181 tgvyrthfps nnntddakgy irfdtqwqkn deehllryst gdlitgalpw ssairlggiq
      241 iarhfairpd lityplpqfs gqaavpstvd lyidnfrtqs aninpgpfvi nnapringag
      301 qativttdal grqistsvpf yvastllkpg vwdfslsgga lrrnyairsa dygemvasgv
      361 vrygttpwlt legrgdiake mhvigggvnf rmgllgvlns aysisntsng afnnvaepln
      421 tnnatpnrlp spaasrrgrg nqrslgysys naffnlnaqh iissdeysdl anyktpslls
      481 rrmtqltgsl slgsygtvgs gyfdvrdalg eqtrlinisy stsllrnsnf ysalnrelgr
      541 kgynvqlvws iplgprgsss isatrtndnq wiqqlnysrs apsngglgwn layanstnnn
      601 nqyqqadivw rtsmmesrmg lygnsnnyny wggltgslvv mnrsvyasnm indafalvst
      661 ngfsnipvsy enqligttna kgylliptva syyqakfqid pmnlpadvml pnverrlaig
      721 ersgylinfp ikrisavnir itdasgqdlp kgsaiyttgn ipisyvgwdg mvyieqvaql
      781 nnlriiradn gtqcysqfkl kttegiqdag ttvcr
//