BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SMu1115
(166 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24379644|ref|NP_721599.1| hypothetical protein SMU.1220c... 325 4e-88
gi|21282591|ref|NP_645679.1| hypothetical protein MW0862 [S... 172 9e-42
gi|49483141|ref|YP_040365.1| hypothetical protein SAR0943 [... 171 2e-41
gi|15923970|ref|NP_371504.1| hypothetical protein SAV0980 [... 170 3e-41
gi|82750592|ref|YP_416333.1| truncated conserved hypothetic... 161 1e-38
gi|104773580|ref|YP_618560.1| hypothetical protein Ldb0438 ... 154 2e-36
gi|42518325|ref|NP_964255.1| hypothetical protein LJ0239 [L... 142 6e-33
gi|148544986|ref|YP_001272356.1| PEBP family protein [Lacto... 139 8e-32
gi|92088480|ref|ZP_01273442.1| YbhB and YbcL [Lactobacillus... 138 1e-31
gi|116332861|ref|YP_794388.1| Phospholipid-binding protein ... 138 1e-31
gi|116496040|ref|YP_807774.1| Phospholipid-binding protein ... 138 1e-31
gi|16080938|ref|NP_391766.1| hypothetical protein BSU38870 ... 136 3e-31
gi|28377273|ref|NP_784165.1| hypothetical protein lp_0358 [... 129 5e-29
gi|116617215|ref|YP_817586.1| Phospholipid-binding protein ... 121 1e-26
gi|23336151|ref|ZP_00121378.1| COG1881: Phospholipid-bindin... 117 2e-25
gi|116493342|ref|YP_805077.1| Phospholipid-binding protein ... 115 8e-25
gi|116334749|ref|YP_796276.1| Phospholipid-binding protein ... 114 2e-24
gi|28379458|ref|NP_786350.1| hypothetical protein lp_3030 [... 112 5e-24
gi|119025185|ref|YP_909030.1| hypothetical protein BAD_0167... 105 1e-21
gi|29376576|ref|NP_815730.1| conserved hypothetical protein... 103 3e-21
gi|154486555|ref|ZP_02027962.1| hypothetical protein BIFADO... 102 6e-21
gi|126700786|ref|YP_001089683.1| putative phosphatidylethan... 100 3e-20
gi|52425431|ref|YP_088568.1| hypothetical protein MS1376 [M... 100 4e-20
gi|152979032|ref|YP_001344661.1| PEBP family protein [Actin... 97 3e-19
gi|15896639|ref|NP_349988.1| Uncharacterized conserved prot... 96 9e-19
gi|53728964|ref|ZP_00348282.1| COG1881: Phospholipid-bindin... 94 2e-18
gi|15603335|ref|NP_246409.1| hypothetical protein PM1470 [P... 93 5e-18
gi|109947992|ref|YP_665220.1| hypothetical protein Hac_1500... 92 2e-17
gi|108562645|ref|YP_626961.1| phospholipid-binding protein ... 88 2e-16
gi|15611274|ref|NP_222925.1| hypothetical protein jhp0204 [... 86 7e-16
gi|81429461|ref|YP_396462.1| hypothetical protein LSA1850 [... 86 1e-15
gi|15644846|ref|NP_207016.1| hypothetical protein HP0218 [H... 84 2e-15
gi|85544553|pdb|2EVV|A Chain A, Crystal Structure Of The Hy... 83 7e-15
gi|154241664|ref|ZP_02023226.1| PEBP family protein [Candid... 80 4e-14
gi|47458918|ref|YP_015780.1| putative phospholipid binding ... 80 4e-14
gi|118195627|gb|ABK78545.1| phospholipid-binding protein [C... 74 2e-12
gi|71894550|ref|YP_278658.1| hypothetical protein MS53_0539... 74 3e-12
gi|71893780|ref|YP_279226.1| hypothetical protein MHJ_0429 ... 70 3e-11
gi|144227624|gb|AAZ44515.2| conserved hypothetical protein ... 70 3e-11
gi|72080764|ref|YP_287822.1| hypothetical protein MHP7448_0... 70 4e-11
gi|54020502|ref|YP_115944.1| hypothetical protein mhp434 [M... 70 4e-11
gi|144575437|gb|AAZ53799.2| conserved hypothetical protein ... 70 4e-11
gi|86606881|ref|YP_475644.1| putative phosphatidylethanolam... 69 1e-10
gi|152992290|ref|YP_001358011.1| hypothetical protein SUN_0... 68 2e-10
gi|57234690|ref|YP_181276.1| phosphatidylethanolamine-bindi... 67 4e-10
gi|15790985|ref|NP_280809.1| hypothetical protein VNG2152C ... 67 5e-10
gi|55377691|ref|YP_135541.1| phosphatidylethanolamine-bindi... 66 7e-10
gi|148550724|ref|YP_001260163.1| PEBP family protein [Sphin... 66 8e-10
gi|73748373|ref|YP_307612.1| putative phosphatidylethanolam... 65 2e-09
gi|23130699|ref|ZP_00112512.1| COG1881: Phospholipid-bindin... 64 2e-09
gi|85858547|ref|YP_460749.1| phosphatidylethanolamine-bindi... 63 6e-09
gi|71894549|ref|YP_278657.1| hypothetical protein MS53_0538... 63 7e-09
gi|116327485|ref|YP_797205.1| Phospholipid binding protein ... 62 1e-08
gi|75910310|ref|YP_324606.1| YbhB and YbcL [Anabaena variab... 62 1e-08
gi|115464405|ref|NP_001055802.1| Os05g0468800 [Oryza sativa... 62 1e-08
gi|14591085|ref|NP_143160.1| hypothetical protein PH1269 [P... 62 2e-08
gi|20090292|ref|NP_616367.1| hypothetical protein MA1432 [M... 61 2e-08
gi|15618786|ref|NP_225072.1| hypothetical protein CPn0877 [... 61 2e-08
gi|15678301|ref|NP_275416.1| hypothetical protein MTH273 [M... 61 2e-08
gi|24216538|ref|NP_714019.1| Phosphatidylethanolamine-bindi... 61 3e-08
gi|21228502|ref|NP_634424.1| hypothetical protein MM_2400 [... 60 4e-08
gi|57641140|ref|YP_183618.1| phospholipid-binding protein, ... 60 6e-08
gi|73670279|ref|YP_306294.1| hypothetical protein Mbar_A281... 59 9e-08
gi|94265209|ref|ZP_01288970.1| YbhB and YbcL [delta proteob... 59 1e-07
gi|10799810|emb|CAC12881.1| cold-regulated protein [Hordeum... 59 1e-07
gi|78045740|ref|YP_361915.1| putative phosphatidylethanolam... 58 2e-07
gi|154249449|ref|YP_001410274.1| PEBP family protein [Fervi... 58 2e-07
gi|126466432|ref|YP_001041541.1| PEBP family protein [Staph... 58 2e-07
gi|14521358|ref|NP_126834.1| hypothetical protein PAB0765 [... 58 2e-07
gi|15605469|ref|NP_220255.1| hypothetical protein CT736 [Ch... 58 2e-07
gi|31544638|ref|NP_853216.1| predicted phospholipid-binding... 58 2e-07
gi|21240974|ref|NP_640556.1| hypothetical protein XAC0200 [... 57 3e-07
gi|26017213|dbj|BAC41494.1| cold regulated protein [Triticu... 57 3e-07
gi|94268252|ref|ZP_01291122.1| YbhB and YbcL [delta proteob... 57 5e-07
gi|147921235|ref|YP_684952.1| hypothetical protein RCIX127 ... 57 5e-07
gi|24113311|ref|NP_707821.1| hypothetical protein SF1979 [S... 56 6e-07
gi|157067086|gb|ABV06341.1| putative phosphatidylethanolami... 56 6e-07
gi|15834734|ref|NP_296493.1| hypothetical protein TC0109 [C... 56 8e-07
gi|31544639|ref|NP_853217.1| predicted phospholipid-binding... 56 8e-07
gi|58584116|ref|YP_203132.1| hypothetical protein XOO4493 [... 56 8e-07
gi|74312475|ref|YP_310894.1| hypothetical protein SSON_1993... 56 9e-07
gi|126353305|ref|ZP_01710316.1| YbhB and YbcL [Caldivirga m... 55 1e-06
gi|92112789|ref|YP_572717.1| YbhB and YbcL [Chromohalobacte... 55 1e-06
gi|145622040|ref|ZP_01778004.1| PEBP family protein [Petrot... 55 1e-06
gi|29840646|ref|NP_829752.1| conserved hypothetical protein... 55 1e-06
gi|84625890|ref|YP_453262.1| hypothetical protein XOO_4233 ... 55 2e-06
gi|152991050|ref|YP_001356772.1| hypothetical protein NIS_1... 54 2e-06
gi|62185460|ref|YP_220245.1| hypothetical protein CAB858 [C... 54 3e-06
gi|89897931|ref|YP_515041.1| hypothetical protein CF0124 [C... 54 3e-06
gi|21229660|ref|NP_635577.1| hypothetical protein XCC0182 [... 54 3e-06
gi|16128528|ref|NP_415077.1| DLP12 prophage; predicted kina... 54 4e-06
gi|66766536|ref|YP_241298.1| hypothetical protein XC_0191 [... 54 4e-06
gi|114320769|ref|YP_742452.1| YbhB and YbcL [Alkalilimnicol... 54 4e-06
gi|15826205|pdb|1FUX|A Chain A, Crystal Structure Of E.Coli... 54 5e-06
gi|120553084|ref|YP_957435.1| PEBP family protein [Marinoba... 53 6e-06
gi|15240946|ref|NP_195750.1| phosphatidylethanolamine-bindi... 53 7e-06
gi|73540184|ref|YP_294704.1| YbhB and YbcL [Ralstonia eutro... 53 7e-06
gi|126726793|ref|ZP_01742633.1| toluene-induced BbsI protei... 53 8e-06
gi|56479078|ref|YP_160667.1| hypothetical protein ebA6371 [... 52 9e-06
>gi|24379644|ref|NP_721599.1| hypothetical protein SMU.1220c [Streptococcus mutans UA159]
gi|24377597|gb|AAN58905.1|AE014958_9 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 166
Score = 325 bits (834), Expect = 4e-88, Method: Composition-based stats.
Identities = 166/166 (100%), Positives = 166/166 (100%)
Query: 1 MKIHVPFKNHIIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCG 60
MKIHVPFKNHIIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCG
Sbjct: 1 MKIHVPFKNHIIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCG 60
Query: 61 FAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDK 120
FAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDK
Sbjct: 61 FAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDK 120
Query: 121 DHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGRA 166
DHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGRA
Sbjct: 121 DHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGRA 166
>gi|21282591|ref|NP_645679.1| hypothetical protein MW0862 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485756|ref|YP_042977.1| hypothetical protein SAS0850 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650172|ref|YP_185852.1| hypothetical protein SACOL0984 [Staphylococcus aureus subsp. aureus
COL]
gi|87162199|ref|YP_493582.1| hypothetical protein SAUSA300_0882 [Staphylococcus aureus subsp.
aureus USA300]
gi|88194674|ref|YP_499470.1| hypothetical protein SAOUHSC_00917 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221062|ref|YP_001331884.1| hypothetical protein NWMN_0850 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|21204029|dbj|BAB94727.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244199|emb|CAG42625.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284358|gb|AAW36452.1| conserved hypothetical protein TIGR00481 [Staphylococcus aureus
subsp. aureus COL]
gi|87128173|gb|ABD22687.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202232|gb|ABD30042.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150373862|dbj|BAF67122.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
Length = 171
Score = 172 bits (435), Expect = 9e-42, Method: Composition-based stats.
Identities = 85/169 (50%), Positives = 113/169 (66%), Gaps = 4/169 (2%)
Query: 1 MKIHVPFKNHIIPDAYAKKA--SETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
MKI FK + IP YA A S++ G +KSFPFE++++PE K LAW+L+DYD+IPV
Sbjct: 1 MKIKTEFKGNNIPYEYAAGADVSDSINGNPIKSFPFEVIELPEGTKYLAWSLIDYDAIPV 60
Query: 59 CGFAYIHWTVANVPTDVTVIS--EDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPY 116
CGFA+IHW+VANV IS D +R +++GKNS S L D+S++ + Y+GP
Sbjct: 61 CGFAWIHWSVANVSVSGNSISIKADLSRTKGDYVQGKNSFTSGLLAEDFSEIENHYVGPT 120
Query: 117 PPDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGR 165
PPD+DH Y LTVYALD L+L GFYLNE L + H I Q ++L+GR
Sbjct: 121 PPDQDHQYELTVYALDHSLNLKNGFYLNEFLKEVNQHKIDQTSINLIGR 169
>gi|49483141|ref|YP_040365.1| hypothetical protein SAR0943 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49241270|emb|CAG39949.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
Length = 171
Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats.
Identities = 85/169 (50%), Positives = 112/169 (66%), Gaps = 4/169 (2%)
Query: 1 MKIHVPFKNHIIPDAYAKKA--SETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
MK+ FK + IP YA A S++ G +KSFPFE+ ++PE K LAW+L+DYD+IPV
Sbjct: 1 MKLKTEFKGNNIPYEYAAGADVSDSINGNPIKSFPFEVTELPEGTKYLAWSLIDYDAIPV 60
Query: 59 CGFAYIHWTVANVPTDVTVIS--EDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPY 116
CGFA+IHW+VANV IS D +R +++GKNS S L D+S++ + Y+GP
Sbjct: 61 CGFAWIHWSVANVSVSGNSISIKADLSRTKGDYVQGKNSFTSGLLAEDFSEIENHYVGPT 120
Query: 117 PPDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGR 165
PPDKDH Y LTVYALD L+L GFYLNE L + H I Q ++L+GR
Sbjct: 121 PPDKDHQYELTVYALDHSLNLKNGFYLNEFLKEVNQHKIDQTSINLIGR 169
>gi|15923970|ref|NP_371504.1| hypothetical protein SAV0980 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926569|ref|NP_374102.1| hypothetical protein SA0840 [Staphylococcus aureus subsp. aureus
N315]
gi|148267413|ref|YP_001246356.1| PEBP family protein [Staphylococcus aureus subsp. aureus JH9]
gi|150393466|ref|YP_001316141.1| PEBP family protein [Staphylococcus aureus subsp. aureus JH1]
gi|156979306|ref|YP_001441565.1| hypothetical protein SAHV_0975 [Staphylococcus aureus subsp. aureus
Mu3]
gi|13700784|dbj|BAB42080.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14246749|dbj|BAB57142.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|147740482|gb|ABQ48780.1| PEBP family protein [Staphylococcus aureus subsp. aureus JH9]
gi|149945918|gb|ABR51854.1| PEBP family protein [Staphylococcus aureus subsp. aureus JH1]
gi|156721441|dbj|BAF77858.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
Length = 171
Score = 170 bits (431), Expect = 3e-41, Method: Composition-based stats.
Identities = 86/169 (50%), Positives = 113/169 (66%), Gaps = 4/169 (2%)
Query: 1 MKIHVPFKNHIIPDAYAKKA--SETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
MKI+ FK + IP YA A S+ G +KSFPFEI ++P++ K LAW+L+DYD+IPV
Sbjct: 1 MKINTEFKGNNIPYEYAAGADISDLINGNPIKSFPFEITELPKDTKYLAWSLIDYDAIPV 60
Query: 59 CGFAYIHWTVANVPT--DVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPY 116
CGFA+IHW+VANV D I D +R +++GKNS S L D+S++ + Y+GP
Sbjct: 61 CGFAWIHWSVANVSITGDSISIKADLSRTKGDYVQGKNSFTSGLLAEDFSEIENHYVGPT 120
Query: 117 PPDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGR 165
PPDKDH Y LTVYALD L+L GFYLNE L + H I Q ++L+GR
Sbjct: 121 PPDKDHQYELTVYALDHSLNLKNGFYLNEFLKEVNQHKIDQTSINLIGR 169
>gi|82750592|ref|YP_416333.1| truncated conserved hypothetical protein [Staphylococcus aureus
RF122]
gi|82656123|emb|CAI80533.1| truncated conserved hypothetical protein [Staphylococcus aureus
RF122]
Length = 150
Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats.
Identities = 76/147 (51%), Positives = 101/147 (68%), Gaps = 2/147 (1%)
Query: 21 SETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVIS- 79
S++ G +KSFPFE+ ++PE K LAW+L+DYD+IPVCGFA+IHW+VANV IS
Sbjct: 2 SDSINGNPIKSFPFEVTELPEGTKYLAWSLIDYDAIPVCGFAWIHWSVANVGVSGNSISI 61
Query: 80 -EDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLD 138
D +R +++GKNS S L D+S++ + Y+GP PPDKDH Y LTVYALD L+L
Sbjct: 62 KADLSRTKGDYVQGKNSFTSGLLAEDFSEIENHYVGPTPPDKDHQYELTVYALDHSLNLK 121
Query: 139 AGFYLNELLHAIEGHVIAQAQMDLVGR 165
GFYLNE L + H I Q ++L+GR
Sbjct: 122 NGFYLNEFLKEVNQHKIDQTSINLIGR 148
>gi|104773580|ref|YP_618560.1| hypothetical protein Ldb0438 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513576|ref|YP_812482.1| Phospholipid-binding protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|103422661|emb|CAI97273.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116092891|gb|ABJ58044.1| Phospholipid-binding protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 163
Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 3/165 (1%)
Query: 1 MKIHVPFKNHIIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCG 60
M+I V + D YAK AS G V SFPF + D+PE K LAW+LVDYDSIPVCG
Sbjct: 1 MQIQVKLDKGYLSDEYAKYASVKEAGNPVVSFPFTLTDLPEGTKYLAWSLVDYDSIPVCG 60
Query: 61 FAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDK 120
FA+IHW ++VP V+ I DF+R +G NS VS+FL TD +++ GY+GP PPDK
Sbjct: 61 FAWIHWLASDVPA-VSEIPADFSRTTDTP-QGYNSTVSRFL-TDPEEVHTGYIGPTPPDK 117
Query: 121 DHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGR 165
DH Y VYAL + L L+ +Y NE L A++G V+A++Q+DL R
Sbjct: 118 DHDYRFRVYALSEKLDLEQPYYYNEFLRALKGKVLAESQVDLPAR 162
>gi|42518325|ref|NP_964255.1| hypothetical protein LJ0239 [Lactobacillus johnsonii NCC 533]
gi|41582609|gb|AAS08221.1| hypothetical protein LJ_0239 [Lactobacillus johnsonii NCC 533]
Length = 169
Score = 142 bits (359), Expect = 6e-33, Method: Composition-based stats.
Identities = 79/169 (46%), Positives = 101/169 (59%), Gaps = 4/169 (2%)
Query: 1 MKIHVPFKNHIIPDAYAKKASETNK--GYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
MKI +P N IPD Y+K A+E K G +SFP I D P+ AKTLA D+DS+PV
Sbjct: 1 MKIEIPTMNGFIPDCYSKFANEDQKIEGKPSRSFPIFITDAPDKAKTLAIYFRDFDSVPV 60
Query: 59 CGFAYIHWTVANVPT-DVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYP 117
CGF +IHW AN+P DV ++G NS +SKFL + S +GY GP P
Sbjct: 61 CGFTWIHWLAANLPVRDVPANISHSKNSSLDFVQGNNSNISKFLGEN-SGPVEGYTGPMP 119
Query: 118 PDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGRA 166
PDK H+YTLTVYALD L L G++LN+ L +E H+I A + + RA
Sbjct: 120 PDKTHYYTLTVYALDTKLDLKDGYWLNDFLRKMESHIIDSATISVPSRA 168
>gi|148544986|ref|YP_001272356.1| PEBP family protein [Lactobacillus reuteri F275]
gi|148532020|gb|ABQ84019.1| PEBP family protein [Lactobacillus reuteri F275]
Length = 168
Score = 139 bits (349), Expect = 8e-32, Method: Composition-based stats.
Identities = 73/169 (43%), Positives = 104/169 (61%), Gaps = 4/169 (2%)
Query: 1 MKIHVPFKNHIIPDAYAKKASETN--KGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
M+I VP N ++ D Y K A + + +KSFP +I D P + KT A +DYDS PV
Sbjct: 1 MQISVPLINGMLADEYGKYAPAADMLADHPIKSFPIKITDAPADTKTFALVFIDYDSTPV 60
Query: 59 CGFAYIHWTVANVPTDVTVISEDFARQ-DQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYP 117
CGF +IHW AN+P +T I + +R+ K ++G NS + + + GY+GP P
Sbjct: 61 CGFTWIHWLAANIPATLTDIPANASRELADKFVQGNNSNAGSLVNGN-PLITSGYVGPQP 119
Query: 118 PDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGRA 166
PDK H YTL V+ALDD L L ++LN+ +HA +GH++A+AQ+DL RA
Sbjct: 120 PDKIHDYTLMVFALDDTLPLKNKYWLNDFIHAAKGHILAKAQIDLPSRA 168
>gi|92088480|ref|ZP_01273442.1| YbhB and YbcL [Lactobacillus reuteri 100-23]
gi|91804837|gb|EAS89674.1| YbhB and YbcL [Lactobacillus reuteri 100-23]
Length = 168
Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/169 (42%), Positives = 105/169 (62%), Gaps = 4/169 (2%)
Query: 1 MKIHVPFKNHIIPDAYAKKA--SETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
M+I VP N ++ D Y K A ++ + +KSFP +I D P + KT A +DYDS PV
Sbjct: 1 MQISVPLINGMLADEYGKYAPVADMLADHPIKSFPIKITDAPADTKTFALVFIDYDSTPV 60
Query: 59 CGFAYIHWTVANVPTDVTVISEDFARQ-DQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYP 117
CGF +IHW AN+P +T I + +R+ K ++G NS + + + GY+GP P
Sbjct: 61 CGFTWIHWLAANIPATLTDIPANASRELADKFVQGNNSNAGSLVNGN-PLITSGYVGPQP 119
Query: 118 PDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGRA 166
PDK H YTL V+ALDD L L+ ++LN+ +H +GH++A+AQ+DL RA
Sbjct: 120 PDKTHDYTLMVFALDDTLPLENKYWLNDFIHVAKGHILAKAQIDLPSRA 168
>gi|116332861|ref|YP_794388.1| Phospholipid-binding protein [Lactobacillus brevis ATCC 367]
gi|116098208|gb|ABJ63357.1| Phospholipid-binding protein [Lactobacillus brevis ATCC 367]
Length = 169
Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats.
Identities = 70/168 (41%), Positives = 101/168 (60%), Gaps = 3/168 (1%)
Query: 1 MKIHVPFKNHIIPDAYAKKAS--ETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
M+I VP +N + D Y+K A+ + G VKSFP + +P+ +T+A L+D+D++PV
Sbjct: 1 MRIFVPTENGYLADEYSKHATGDDVYAGQPVKSFPISLSKLPKKTQTIALNLIDFDAVPV 60
Query: 59 CGFAYIHWTVANVPTDVTVISEDFARQDQ-KHLKGKNSLVSKFLTTDYSDMYDGYLGPYP 117
GF +IHW AN P I+ D +R + H G+NS + ++ Y GP+P
Sbjct: 61 SGFPWIHWVAANFPGTTREITADVSRTNAIPHTHGRNSNAGSLVGNTDPAIFQNYTGPFP 120
Query: 118 PDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGR 165
PD+DH Y+LTVYAL+ L L GF+LN+LLH I GHV+ A + L GR
Sbjct: 121 PDQDHDYSLTVYALNTKLDLAEGFWLNDLLHQINGHVLDTATITLKGR 168
>gi|116496040|ref|YP_807774.1| Phospholipid-binding protein [Lactobacillus casei ATCC 334]
gi|116106190|gb|ABJ71332.1| Phospholipid-binding protein [Lactobacillus casei ATCC 334]
Length = 169
Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/168 (42%), Positives = 98/168 (58%), Gaps = 3/168 (1%)
Query: 1 MKIHVPFKNHIIPDAYAKKAS--ETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
MK+ VP N + D Y K AS + GY + SFPF I D P + A +DYD++PV
Sbjct: 1 MKLSVPLINGQLADRYGKHASGSDVKNGYPITSFPFTIEDAPAETVSFALWFLDYDAVPV 60
Query: 59 CGFAYIHWTVANVPTDVTVISEDFARQDQ-KHLKGKNSLVSKFLTTDYSDMYDGYLGPYP 117
G +IHW AN+P D T + ++ ++GKN+ + GY+GP P
Sbjct: 61 GGLPWIHWNAANIPADSTTFPAGASHTNKVPMVEGKNATAGHLVGNTDPFTQAGYVGPQP 120
Query: 118 PDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGR 165
PDKDH YTL V+ALD L L AGF+LNE HA++GH++AQA++DL R
Sbjct: 121 PDKDHDYTLIVFALDTKLPLQAGFWLNEARHAMKGHILAQAEIDLPSR 168
>gi|16080938|ref|NP_391766.1| hypothetical protein BSU38870 [Bacillus subtilis subsp. subtilis
str. 168]
gi|20141934|sp|P55185|YXKA_BACSU Uncharacterized protein yxkA
gi|1783240|dbj|BAA11717.1| yxkA [Bacillus subtilis]
gi|2636422|emb|CAB15913.1| yxkA [Bacillus subtilis subsp. subtilis str. 168]
Length = 168
Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats.
Identities = 75/168 (44%), Positives = 104/168 (61%), Gaps = 4/168 (2%)
Query: 1 MKIHVPFKNHIIPDAYAKKASETNK--GYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
M I+V N + D Y+K A E K G SFP DIP AKTLA T +D+D+IPV
Sbjct: 1 MNIYVE-ANPYLHDKYSKYADEKYKREGNPFVSFPIHFDDIPSGAKTLALTFIDHDAIPV 59
Query: 59 CGFAYIHWTVANVPTDVTVISEDFARQDQK-HLKGKNSLVSKFLTTDYSDMYDGYLGPYP 117
CGF++IHWT AN+P + + E + + Q ++G+NS S ++ + Y GP P
Sbjct: 60 CGFSWIHWTAANIPAYIGELPEHASEERQDLMIQGQNSFASPLAGSNDPKVIHQYCGPTP 119
Query: 118 PDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGR 165
PDKDH YTLTVYALD +L+L GFYLNEL ++ H++A+ ++L+ R
Sbjct: 120 PDKDHAYTLTVYALDAELNLQPGFYLNELYQEMKEHILAETSIELLAR 167
>gi|28377273|ref|NP_784165.1| hypothetical protein lp_0358 [Lactobacillus plantarum WCFS1]
gi|28270104|emb|CAD63004.1| unknown [Lactobacillus plantarum WCFS1]
Length = 169
Score = 129 bits (324), Expect = 5e-29, Method: Composition-based stats.
Identities = 66/168 (39%), Positives = 104/168 (61%), Gaps = 3/168 (1%)
Query: 1 MKIHVPFKNHIIPDAYAKKAS--ETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
M++ +P N + Y+K+A+ +T KG+ + SFP +I D+P +LA+T VD+D+IPV
Sbjct: 1 MQLSIPTINGALAATYSKQAAVAQTYKGHPIISFPVDISDVPAGTHSLAFTFVDHDAIPV 60
Query: 59 CGFAYIHWTVANVPTDVTVISEDFARQDQ-KHLKGKNSLVSKFLTTDYSDMYDGYLGPYP 117
GF +IHW AN+P T I E+ ++ ++G NS ++ + Y+GPYP
Sbjct: 61 GGFTWIHWIAANLPATTTHIPENASQTGAIPMVQGNNSTAGAYVHETDPKVSQHYVGPYP 120
Query: 118 PDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGR 165
PDKDH Y+ ++ALD +L L G++LNE AI GHV+A A+ ++G+
Sbjct: 121 PDKDHRYSFKLFALDTELDLQPGYWLNEFHDAIAGHVLATAKTTVIGK 168
>gi|116617215|ref|YP_817586.1| Phospholipid-binding protein [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116096062|gb|ABJ61213.1| Phospholipid-binding protein [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 168
Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats.
Identities = 73/171 (42%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 1 MKIHVPFKNHIIPDAYAKKASETNK--GYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
MKI V N IPD YAK A + +FP EI + P ++L+ +L+DYD++PV
Sbjct: 1 MKIDVTLDNGFIPDKYAKYAPANYRTNDMPTTNFPVEISNTPAGTQSLSVSLIDYDAVPV 60
Query: 59 CGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSL---VSKFLTTDYSDMYDGYLGP 115
CGF +IHW AN+P VT I E+ R ++ G NS V K + + Y+GP
Sbjct: 61 CGFPWIHWLAANLP--VTNIPENL-RATKRGTFGTNSTWHDVQKLGHPANASINQSYIGP 117
Query: 116 YPPDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGRA 166
PPDK H+YTLTV+ALD L L GF+LNEL HV+ A ++L RA
Sbjct: 118 MPPDKTHNYTLTVFALDTKLDLQNGFFLNELRSKSMEHVLDIAILELPARA 168
>gi|23336151|ref|ZP_00121378.1| COG1881: Phospholipid-binding protein [Bifidobacterium longum
DJO10A]
Length = 184
Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats.
Identities = 78/171 (45%), Positives = 99/171 (57%), Gaps = 22/171 (12%)
Query: 1 MKIHVPFKNHIIPDAYAKKASET--NKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
MKI F +IPD +AK A+ N G V SFPF I D+ A+ L W VD DSIPV
Sbjct: 1 MKISADFT--VIPDDFAKAAAPEYFNGGVPVVSFPFYIDDVDPEARYLHWEFVDPDSIPV 58
Query: 59 CGFAYIHWTVANVPTDVTV----------ISEDFARQ----DQKHLKGKNSLVSKFL--T 102
CGF +IHW+VAN+P D + I DF+RQ + ++G+NS SKFL +
Sbjct: 59 CGFEWIHWSVANLPIDALMYDFNDSHALAIPPDFSRQLPAMIPETMQGRNSSASKFLGRS 118
Query: 103 TDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDL-SLDAGFYLNELLHAIEG 152
TD + + Y GP PPDKDH Y L V+A L L+ GF+LNELLHA+
Sbjct: 119 TDPAVIMR-YNGPQPPDKDHEYYLQVWATKKPLPGLNQGFWLNELLHALRA 168
>gi|116493342|ref|YP_805077.1| Phospholipid-binding protein [Pediococcus pentosaceus ATCC 25745]
gi|116103492|gb|ABJ68635.1| Phospholipid-binding protein [Pediococcus pentosaceus ATCC 25745]
Length = 166
Score = 115 bits (288), Expect = 8e-25, Method: Composition-based stats.
Identities = 67/168 (39%), Positives = 95/168 (56%), Gaps = 4/168 (2%)
Query: 1 MKIHVPFKNHIIPDAYAKKASE--TNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
MKI V N +PD + K A + T+ + +SFP I DIP K LA TL+DYD++PV
Sbjct: 1 MKISVDLINGYLPDQFGKHAPKAYTSHDFPTRSFPINISDIPIGTKALALTLIDYDAVPV 60
Query: 59 CGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPP 118
GF +IHW ++ I E+ + + ++GKNS VSK++ + YLGP PP
Sbjct: 61 AGFPWIHWIATDIDA-TNYIPENISILNTGIVQGKNSSVSKYIDFHDPAIEARYLGPKPP 119
Query: 119 DKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGRA 166
DH YTLTVYAL + L GFYLN+L+ + I +A +++ R
Sbjct: 120 -ADHDYTLTVYALKEKTGLKPGFYLNDLMRQTKERTIEKATLEIPSRG 166
>gi|116334749|ref|YP_796276.1| Phospholipid-binding protein [Lactobacillus brevis ATCC 367]
gi|116100096|gb|ABJ65245.1| Phospholipid-binding protein [Lactobacillus brevis ATCC 367]
Length = 178
Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 99/175 (56%), Gaps = 13/175 (7%)
Query: 1 MKIHVPFKNHIIPDAYA--KKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
M+I VPF +PD Y + A E G ++SFPF + D+P+ A T+A++L+D+D+IPV
Sbjct: 1 MQIQVPFALPNLPDEYGINQPADELIDGINLRSFPFTVTDLPKAAVTVAFSLIDHDTIPV 60
Query: 59 CGFAYIHWTVANVP-TDVTVISEDFARQDQKHLKGKNSL---------VSKFLTTDYSDM 108
GF++IHW AN+P T V+ D A Q +G N+L + F Y D+
Sbjct: 61 VGFSWIHWLGANLPVTAGQVVVPDNASQTATFTQGTNTLPMIIDQIHQPTAFKQRGY-DL 119
Query: 109 YDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLV 163
Y GP P H Y LTV A+D L + +G+ NE L +EGHV+AQ ++L+
Sbjct: 120 TKHYAGPRPRGGVHAYRLTVTAVDTTLPVTSGYLYNEFLRMVEGHVVAQTHVNLL 174
>gi|28379458|ref|NP_786350.1| hypothetical protein lp_3030 [Lactobacillus plantarum WCFS1]
gi|28272297|emb|CAD65210.1| unknown [Lactobacillus plantarum WCFS1]
Length = 164
Score = 112 bits (281), Expect = 5e-24, Method: Composition-based stats.
Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
Query: 1 MKIHVPFKNHIIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCG 60
M+I V + +P Y A+ + G + SFP EI IP A +L+DYD++P G
Sbjct: 1 MQIKVDLDDGFLPRIYTSNANVKHSGQPILSFPIEIKSIPAITTAFAISLIDYDAVPRTG 60
Query: 61 FAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDK 120
F +IHW N+P + I DF+R + +G+NS +S+F + S D Y GP PPD+
Sbjct: 61 FPFIHWLATNIPV-MAEIPADFSRNFEGP-QGQNSWMSRFYQLNDSYFADHYAGPNPPDQ 118
Query: 121 DHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVG 164
H YTL+V+AL +L L+ FY N+ + G+V+ +A++ ++
Sbjct: 119 PHRYTLSVFALKHNLPLNNRFYYNDFREQLVGNVLTKAELQILA 162
>gi|119025185|ref|YP_909030.1| hypothetical protein BAD_0167 [Bifidobacterium adolescentis ATCC
15703]
gi|118764769|dbj|BAF38948.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
Length = 229
Score = 105 bits (261), Expect = 1e-21, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 99/187 (52%), Gaps = 23/187 (12%)
Query: 1 MKIHVPFKNHIIPDAYAKKASETN--KGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
MKI F +IPDA+AK A N G + SFPF I ++ + + L W VD DSIPV
Sbjct: 45 MKISADFT--VIPDAFAKAAPPENCIDGTPIVSFPFYIDELDPSVQFLHWEFVDPDSIPV 102
Query: 59 CGFAYIHWTVANVPTDVTV----------ISEDFARQDQ----KHLKGKNSLVSKFLT-- 102
CGF + HW++AN+P D + I DF+R + ++G+ S S L
Sbjct: 103 CGFQWNHWSLANLPVDALMYDFNDSHALAIPADFSRTVSAMIPETVQGRTSAASPLLKGR 162
Query: 103 TDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLS-LDAGFYLNELLHAIE--GHVIAQAQ 159
+D + Y GPYPPD+DH Y L V+ L+ L+ GF+LNE+ A+ G + Q
Sbjct: 163 SDDPAVTMRYNGPYPPDRDHEYYLHVWGTTAPLNGLNQGFWLNEMERALRNSGAIADQGA 222
Query: 160 MDLVGRA 166
+ L G+A
Sbjct: 223 IFLTGKA 229
>gi|29376576|ref|NP_815730.1| conserved hypothetical protein TIGR00481 [Enterococcus faecalis
V583]
gi|29344040|gb|AAO81800.1| conserved hypothetical protein TIGR00481 [Enterococcus faecalis
V583]
Length = 171
Score = 103 bits (258), Expect = 3e-21, Method: Composition-based stats.
Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 13/172 (7%)
Query: 3 IHVPFKNHIIPDAYAKKASETNKGY--AVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCG 60
+H+ ++H+ D Y K+ S + + SFP + IP+ A+ L+W L+DYD+IP+ G
Sbjct: 1 MHITNRSHL-ADRYGKRTSAEFLLHERPILSFPISLAAIPKEARYLSWELIDYDTIPLIG 59
Query: 61 FAYIHWTVANVPTDVTVISEDFARQDQK-HLKGKNSLVS--------KFLTTDYSDMYDG 111
F +IHW ANVP I EDF+R K ++GKNSL S T ++ +
Sbjct: 60 FPFIHWLAANVPV-TNEIPEDFSRTALKPTIQGKNSLASPLGKQMIPALATETLPELTER 118
Query: 112 YLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLV 163
YLG P H YTL VY + L+L GF+ NEL A+ ++A+A+ + +
Sbjct: 119 YLGLSPRSGVHTYTLYVYTTKNPLNLKEGFFANELHQALNDQLLAKAKFEFL 170
>gi|154486555|ref|ZP_02027962.1| hypothetical protein BIFADO_00370 [Bifidobacterium adolescentis
L2-32]
gi|154084418|gb|EDN83463.1| hypothetical protein BIFADO_00370 [Bifidobacterium adolescentis
L2-32]
Length = 191
Score = 102 bits (255), Expect = 6e-21, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 99/187 (52%), Gaps = 23/187 (12%)
Query: 1 MKIHVPFKNHIIPDAYAKKASETN--KGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
MKI F +IPDA+AK A N G + SFPF I ++ + + L W VD DSIPV
Sbjct: 7 MKISADFT--VIPDAFAKAAPPENCIDGTPIVSFPFYIDELDPSVQFLHWEFVDPDSIPV 64
Query: 59 CGFAYIHWTVANVPTDVTV----------ISEDFARQDQ----KHLKGKNSLVSKFLTTD 104
CGF + HW++AN+P D + I DF+R + ++G+ S S L
Sbjct: 65 CGFQWNHWSLANLPVDALMYDFNDSHALAIPADFSRTVSAMIPETVQGRTSAASPLLKGR 124
Query: 105 YSD--MYDGYLGPYPPDKDHHYTLTVYALDDDLS-LDAGFYLNELLHAIE--GHVIAQAQ 159
SD + Y GPYPPD+DH Y L V+ L+ L+ GF+LNE+ A+ G + Q
Sbjct: 125 SSDPAVTMRYNGPYPPDQDHDYYLHVWGTTAPLNGLNQGFWLNEMERALRNSGAIADQGA 184
Query: 160 MDLVGRA 166
+ L G+A
Sbjct: 185 IFLTGKA 191
>gi|126700786|ref|YP_001089683.1| putative phosphatidylethanolamine-binding regulatory protein
[Clostridium difficile 630]
gi|145953660|ref|ZP_01802668.1| hypothetical protein CdifQ_04003664 [Clostridium difficile
QCD-32g58]
gi|115252223|emb|CAJ70063.1| putative phosphatidylethanolamine-binding regulatory protein
[Clostridium difficile 630]
Length = 165
Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats.
Identities = 58/148 (39%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 9 NHIIPDAYAKKASETNKG-YAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWT 67
N +I D Y K+ ++ N+G S P + D P+N + A L D DS+PVCGFA+IHW
Sbjct: 10 NGVIEDKYGKRGTQFNEGGMPTYSLPLKFEDAPKNTVSFAVFLEDKDSVPVCGFAWIHWL 69
Query: 68 VANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLT 127
N+ D +E D ++G S K D + Y G PPD+ H Y +
Sbjct: 70 AVNITKDELNENESVTATD--FVQGTTSWHGKLGGLDRLEA-SVYGGMAPPDRPHVYEIH 126
Query: 128 VYALDDDLSLDAGFYLNELLHAIEGHVI 155
V+ALD L L+ GFY+NE AIEGHV+
Sbjct: 127 VFALDTILDLEKGFYMNEFFKAIEGHVL 154
>gi|52425431|ref|YP_088568.1| hypothetical protein MS1376 [Mannheimia succiniciproducens MBEL55E]
gi|52307483|gb|AAU37983.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 165
Score = 99.8 bits (247), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/154 (37%), Positives = 83/154 (53%), Gaps = 4/154 (2%)
Query: 8 KNHIIPDAYAKKASE-TNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHW 66
KN D Y K+ S+ T G S PFEI PE K+ A L D D++ GF +IHW
Sbjct: 9 KNGAFEDKYGKRGSQFTPNGMPSYSIPFEITGAPEGTKSFAVVLEDKDAVTASGFVWIHW 68
Query: 67 TVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTL 126
+AN+ + T + E+ ++ ++G NS S D ++ Y G PP+ H Y L
Sbjct: 69 LIANL--ERTSVLENESQTATDFIQGANSWSSVLAKLDITEA-SAYGGMAPPNCLHRYEL 125
Query: 127 TVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQM 160
VYALD L L GF NEL A++GH++A+A++
Sbjct: 126 FVYALDTKLDLQPGFKFNELHFAMQGHILAKAEI 159
>gi|152979032|ref|YP_001344661.1| PEBP family protein [Actinobacillus succinogenes 130Z]
gi|150840755|gb|ABR74726.1| PEBP family protein [Actinobacillus succinogenes 130Z]
Length = 165
Score = 97.1 bits (240), Expect = 3e-19, Method: Composition-based stats.
Identities = 58/153 (37%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
Query: 9 NHIIPDAYAKKASE-TNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWT 67
N D Y K+ ++ T G S PFEI + P + K+ A + D D+I GF +IHW
Sbjct: 10 NGAFEDKYGKRGNQFTPNGMPSYSVPFEISEAPADTKSFAVVVEDKDAITASGFVWIHWL 69
Query: 68 VANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLT 127
+AN+ T +SE+ ++ ++G NS SK + Y G PP+ H Y +
Sbjct: 70 IANLHR--TSVSENESQTATDFIQGANSWASKLGGFSIEEA-SAYGGMAPPNCLHRYEII 126
Query: 128 VYALDDDLSLDAGFYLNELLHAIEGHVIAQAQM 160
VYALD DL L GF NEL A++GHV+AQA +
Sbjct: 127 VYALDTDLDLVQGFRFNELHFAMQGHVLAQASI 159
>gi|15896639|ref|NP_349988.1| Uncharacterized conserved protein, YbhB family [Clostridium
acetobutylicum ATCC 824]
gi|15026484|gb|AAK81328.1|AE007837_6 Uncharacterized conserved protein, YbhB family [Clostridium
acetobutylicum ATCC 824]
Length = 165
Score = 95.5 bits (236), Expect = 9e-19, Method: Composition-based stats.
Identities = 54/153 (35%), Positives = 85/153 (55%), Gaps = 4/153 (2%)
Query: 9 NHIIPDAYAKKASETNK-GYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWT 67
N +I + Y K+ + N+ G S P +I + P+ + A L D D++PV GF++IHW
Sbjct: 10 NGVIQNKYGKRGEQFNEVGIPTYSLPVKIKNAPDKTVSYALVLEDKDAVPVVGFSWIHWL 69
Query: 68 VANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLT 127
+N+ + +E + +D ++G NS S TD GY G PP+ H Y L
Sbjct: 70 ASNITKEELNENESISAKD--FVQGINSWCSPIGNTD-RKFCIGYGGMTPPNAPHIYELH 126
Query: 128 VYALDDDLSLDAGFYLNELLHAIEGHVIAQAQM 160
V+ALD L+L GFY+NEL A+EGH++ ++ +
Sbjct: 127 VFALDVKLNLKDGFYMNELYKAMEGHILEKSTL 159
>gi|53728964|ref|ZP_00348282.1| COG1881: Phospholipid-binding protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208819|ref|YP_001054044.1| hypothetical protein APL_1355 [Actinobacillus pleuropneumoniae L20]
gi|126097611|gb|ABN74439.1| hypothetical protein APL_1355 [Actinobacillus pleuropneumoniae L20]
Length = 165
Score = 94.4 bits (233), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 8 KNHIIPDAYAKKASE-TNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHW 66
KN D Y K+ S+ + G S PFEI ++PE K+ A L D D+I GF +IHW
Sbjct: 9 KNGAFEDKYGKRGSQFSPNGMPSYSIPFEISEVPEGTKSFAVVLEDKDAITASGFVWIHW 68
Query: 67 TVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTL 126
+A++ + T I+E+ + ++G NS SK + + Y G PP+ H Y L
Sbjct: 69 LIADL--ERTKIAENESLTATDFVQGANSWASKLGNFSIEEASN-YGGMAPPNCKHRYEL 125
Query: 127 TVYALDDDLSLDAGFYLNELLHAIEGHVIAQA 158
VYALD L+L +GF N+L A++ H++A A
Sbjct: 126 IVYALDTKLNLISGFRFNDLHFAMQDHILATA 157
>gi|15603335|ref|NP_246409.1| hypothetical protein PM1470 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721852|gb|AAK03554.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 170
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 8 KNHIIPDAYAKKASE-TNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHW 66
KN D Y K+ + + G S PF+I ++P K+ A L D D+I GF +IHW
Sbjct: 14 KNGAFEDKYGKRGKQFSPNGMPTYSIPFDISEVPVGTKSFAVVLEDKDAITASGFVWIHW 73
Query: 67 TVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTL 126
+AN+ + T + E+ + +++G NS S D ++ Y G PP+ H Y L
Sbjct: 74 LIANL--ERTSVQENESLTATDYVQGANSWASVLGKFDIAEA-SFYGGMAPPNSLHRYEL 130
Query: 127 TVYALDDDLSLDAGFYLNELLHAIEGHVIAQA 158
VYALD L L AGF N+L A++GH++ QA
Sbjct: 131 IVYALDCKLDLSAGFRFNDLHFAMQGHILDQA 162
>gi|109947992|ref|YP_665220.1| hypothetical protein Hac_1500 [Helicobacter acinonychis str.
Sheeba]
gi|109715213|emb|CAK00221.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 183
Score = 91.7 bits (226), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/125 (37%), Positives = 77/125 (61%), Gaps = 11/125 (8%)
Query: 41 ENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKF 100
E A++ A L+D+D+ VCG +++HW V N+P + V+ E+ + D++ ++G NSL F
Sbjct: 47 EGAQSYALELIDHDAQKVCGMSFVHWVVGNIPHN--VLEENASMMDKRIIQGVNSLTQGF 104
Query: 101 LTT-------DYSDMYDG-YLGPYPPDKDHHYTLTVYALD-DDLSLDAGFYLNELLHAIE 151
+ + S++ + Y+GP PP+ DHHY + VYALD L+L A F+L +L +
Sbjct: 105 IRSPLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLHDKMR 164
Query: 152 GHVIA 156
GH+IA
Sbjct: 165 GHIIA 169
>gi|108562645|ref|YP_626961.1| phospholipid-binding protein [Helicobacter pylori HPAG1]
gi|107836418|gb|ABF84287.1| phospholipid-binding protein [Helicobacter pylori HPAG1]
Length = 183
Score = 88.2 bits (217), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
Query: 41 ENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKF 100
E A++ A L+D+D+ VCG +++HW V N+ + V+ E+ + D++ +G NSL F
Sbjct: 47 EGAQSYALELIDHDAQKVCGMSFVHWVVGNISYN--VLEENASMMDKRITQGVNSLTQGF 104
Query: 101 LTTDYSDMYDG--------YLGPYPPDKDHHYTLTVYALD-DDLSLDAGFYLNELLHAIE 151
+ + ++ Y+GP PP+ DHHY + VYALD L+L A F+L +L +
Sbjct: 105 IRSSLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLHDKMR 164
Query: 152 GHVIA 156
GH+IA
Sbjct: 165 GHIIA 169
>gi|15611274|ref|NP_222925.1| hypothetical protein jhp0204 [Helicobacter pylori J99]
gi|4154716|gb|AAD05779.1| putative [Helicobacter pylori J99]
Length = 183
Score = 86.3 bits (212), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 11/125 (8%)
Query: 41 ENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKF 100
E AK+ A L+D+D+ VCG ++HW V N+ + V+ E+ + D++ ++G NSL F
Sbjct: 47 EGAKSYALELIDHDAQKVCGMPFVHWVVGNISYN--VLEENASMMDKRIVQGVNSLTQGF 104
Query: 101 LTTDYSDMYDG--------YLGPYPPDKDHHYTLTVYALD-DDLSLDAGFYLNELLHAIE 151
+ + ++ Y+GP PP+ DHHY + VYALD L L A F+L +L +
Sbjct: 105 IRSSLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLELKAPFFLGDLHDKMR 164
Query: 152 GHVIA 156
H+IA
Sbjct: 165 NHIIA 169
>gi|81429461|ref|YP_396462.1| hypothetical protein LSA1850 [Lactobacillus sakei subsp. sakei 23K]
gi|15487799|gb|AAL00945.1|AF401663_2 putative phosphatidylethanolamine-binding protein [Lactobacillus
sakei]
gi|78611104|emb|CAI56157.1| Hypothetical protein [Lactobacillus sakei subsp. sakei 23K]
Length = 170
Score = 85.5 bits (210), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 9 NHIIPDAYAKKASETNK-GYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVC-GFAYIHW 66
N D Y + N+ G S PF I P + T A D D+ V GF +IHW
Sbjct: 10 NGYFDDIYGGYSDALNEIGMPTYSIPFIIEQAPADTVTYAAIFYDLDAYEVTKGFPWIHW 69
Query: 67 TVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTL 126
T+AN+ T + + ++Q ++G N+ S ++ Y G PP++DH YTL
Sbjct: 70 TLANL--KATTVLANSSQQSPAFVQGVNTWHSPMTDNQAAEASACYGGMTPPNRDHTYTL 127
Query: 127 TVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMD 161
TV+ALD L L+ GFYLN+L A++GH++ +A ++
Sbjct: 128 TVFALDCSLDLEDGFYLNQLTTAMKGHILDKAVLE 162
>gi|15644846|ref|NP_207016.1| hypothetical protein HP0218 [Helicobacter pylori 26695]
gi|2313309|gb|AAD07287.1| predicted coding region HP0218 [Helicobacter pylori 26695]
Length = 183
Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 11/125 (8%)
Query: 41 ENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKF 100
E A++ A L+D+D+ VCG ++HW V N+ +V + E+ + D++ ++G NSL F
Sbjct: 47 EGAQSYALELIDHDAQKVCGMPFVHWVVGNIAHNV--LEENASMMDKRIVQGVNSLTQGF 104
Query: 101 LTT-------DYSDMYDG-YLGPYPPDKDHHYTLTVYALD-DDLSLDAGFYLNELLHAIE 151
+ + S++ + Y+GP PP+ DHHY + VYALD L+L A F+L +L +
Sbjct: 105 IRSPLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLHDKMR 164
Query: 152 GHVIA 156
H+IA
Sbjct: 165 NHIIA 169
>gi|85544553|pdb|2EVV|A Chain A, Crystal Structure Of The Hypothetical Protein Hp0218 From
Helicobacter Pylori
gi|85544554|pdb|2EVV|B Chain B, Crystal Structure Of The Hypothetical Protein Hp0218 From
Helicobacter Pylori
gi|85544555|pdb|2EVV|C Chain C, Crystal Structure Of The Hypothetical Protein Hp0218 From
Helicobacter Pylori
gi|85544556|pdb|2EVV|D Chain D, Crystal Structure Of The Hypothetical Protein Hp0218 From
Helicobacter Pylori
Length = 207
Score = 82.8 bits (203), Expect = 7e-15, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
Query: 41 ENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKF 100
E A++ A L+D+D+ VCG ++HW V N+ +V + E+ + D++ ++G NSL F
Sbjct: 69 EGAQSYALELIDHDAQKVCGXPFVHWVVGNIAHNV--LEENASXXDKRIVQGVNSLTQGF 126
Query: 101 LTT-------DYSDMYDG-YLGPYPPDKDHHYTLTVYALD-DDLSLDAGFYLNELLHAIE 151
+ + S++ + Y+GP PP+ DHHY + VYALD L+L A F+L +L
Sbjct: 127 IRSPLNESEKQRSNLNNSVYIGPXPPNGDHHYLIQVYALDIPKLALKAPFFLGDLHDKXR 186
Query: 152 GHVIA 156
H+IA
Sbjct: 187 NHIIA 191
>gi|154241664|ref|ZP_02023226.1| PEBP family protein [Candidatus Nitrosopumilus maritimus SCM1]
gi|154203480|gb|EDN89451.1| PEBP family protein [Candidatus Nitrosopumilus maritimus SCM1]
Length = 149
Score = 80.5 bits (197), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 76/125 (60%), Gaps = 13/125 (10%)
Query: 36 IVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNS 95
I D+P++AK+LA + D D++ G ++HW + N+PT+VT + E+ ++ ++G+
Sbjct: 31 INDVPDSAKSLALVMDDPDAMGAVGKVWVHWVLWNIPTEVTKMDENSIPENS--IEGE-- 86
Query: 96 LVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVI 155
TD+ ++ GY GP PPDK+H Y +YALD L L G +L ++I+ H+I
Sbjct: 87 -------TDFGEI--GYGGPAPPDKEHTYIFKLYALDTALDLGKGSTKKDLENSIQDHII 137
Query: 156 AQAQM 160
A+A++
Sbjct: 138 AKAKL 142
>gi|47458918|ref|YP_015780.1| putative phospholipid binding protein [Mycoplasma mobile 163K]
gi|47458246|gb|AAT27569.1| putative phospholipid binding protein [Mycoplasma mobile 163K]
Length = 172
Score = 80.1 bits (196), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 8/123 (6%)
Query: 43 AKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNS-----LV 97
AK+ A ++DY++ V GF +IHW VAN+ T+ + E + ++Q L+G NS +V
Sbjct: 44 AKSYALEMIDYEASGVVGFPFIHWVVANIKTN--SLEEGASLKNQSILQGVNSRTPKGIV 101
Query: 98 SKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALD-DDLSLDAGFYLNELLHAIEGHVIA 156
+ ++ Y GPYPPD+ H Y + +YAL+ + L+L F L +L AI+GHVI
Sbjct: 102 PEAFRAPTIELASQYFGPYPPDQSHDYVIRIYALNVEKLNLAKNFNLADLHRAIKGHVID 161
Query: 157 QAQ 159
+ +
Sbjct: 162 KGK 164
>gi|118195627|gb|ABK78545.1| phospholipid-binding protein [Cenarchaeum symbiosum A]
Length = 150
Score = 74.3 bits (181), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 15/128 (11%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL 90
S P EI +PE ++LA + D D+ G ++HW V ++P+D+ I E
Sbjct: 28 SPPLEIEGVPEACRSLALIMDDPDAQAAVGKTWVHWLVWHMPSDMHSIPE---------- 77
Query: 91 KGKNSLVSKFLTTDYSDMYDG-YLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELLHA 149
SLVS T +D + Y GP PPDK H Y +YALD DLSL AG +L A
Sbjct: 78 ----SLVSGGCTEGRNDFGEAAYGGPAPPDKRHTYFFRLYALDFDLSLSAGCDRKDLEDA 133
Query: 150 IEGHVIAQ 157
++GH++ +
Sbjct: 134 MKGHILEE 141
>gi|71894550|ref|YP_278658.1| hypothetical protein MS53_0539 [Mycoplasma synoviae 53]
gi|71851338|gb|AAZ43947.1| conserved hypothetical protein [Mycoplasma synoviae 53]
Length = 221
Score = 73.9 bits (180), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/181 (32%), Positives = 82/181 (45%), Gaps = 49/181 (27%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL 90
SF + +P NAK+ A L D+D++ V GF +IHW NV + +SE ++ HL
Sbjct: 39 SFELKWDKMP-NAKSYALLLEDFDAMKVIGFPFIHWVAVNVKENF--VSEAASKLAFDHL 95
Query: 91 K--------------GKNSLVSKFLTTD-----------YSDMYDG--------YLGPYP 117
K G NS VSK L T+ +M+ Y GPYP
Sbjct: 96 KENLEKAMPSNLLWQGYNSSVSKTLVTENKEKGSSLNGILPEMFTSLELEDAAQYFGPYP 155
Query: 118 PDKDHHYTLTVYALDDDLS-------------LDAGFYLNELLHAIEGHVIAQAQMDLVG 164
PDKDH YTLTV+ LD D S LD +Y+ + L A++ HV+ ++
Sbjct: 156 PDKDHVYTLTVFGLDVDASELEYKDADGLSHKLDKPYYVGDFLQAVDTHVVGTYTLNFKY 215
Query: 165 R 165
R
Sbjct: 216 R 216
>gi|71893780|ref|YP_279226.1| hypothetical protein MHJ_0429 [Mycoplasma hyopneumoniae J]
Length = 409
Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL 90
SFP + D + AK+ A TL+DY++ GF +IHW AN+ + + FAR +K
Sbjct: 33 SFPLKW-DKIKAAKSYAVTLIDYEATGELGFVFIHWIAANIKKNKLKWDDSFARP-EKMY 90
Query: 91 KGKNSLVSK----FLTTDYSDMYDG-YLGPYPPDKDHHYTLTVYALD------DDLSLDA 139
+ +NS+ L Y + DG Y GP PP KDH+Y L V+ALD +DL
Sbjct: 91 QFENSMTKHATNYLLDEFYREHPDGVYFGPLPPLKDHNYRLEVFALDVENIIPEDLKNKR 150
Query: 140 GFYLNELLHAIEGHVI 155
FY ++ L I+ HV+
Sbjct: 151 LFY-DDFLELIKNHVL 165
>gi|144227624|gb|AAZ44515.2| conserved hypothetical protein [Mycoplasma hyopneumoniae J]
Length = 408
Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL 90
SFP + D + AK+ A TL+DY++ GF +IHW AN+ + + FAR +K
Sbjct: 32 SFPLKW-DKIKAAKSYAVTLIDYEATGELGFVFIHWIAANIKKNKLKWDDSFARP-EKMY 89
Query: 91 KGKNSLVSK----FLTTDYSDMYDG-YLGPYPPDKDHHYTLTVYALD------DDLSLDA 139
+ +NS+ L Y + DG Y GP PP KDH+Y L V+ALD +DL
Sbjct: 90 QFENSMTKHATNYLLDEFYREHPDGVYFGPLPPLKDHNYRLEVFALDVENIIPEDLKNKR 149
Query: 140 GFYLNELLHAIEGHVI 155
FY ++ L I+ HV+
Sbjct: 150 LFY-DDFLELIKNHVL 164
>gi|72080764|ref|YP_287822.1| hypothetical protein MHP7448_0431 [Mycoplasma hyopneumoniae 7448]
Length = 409
Score = 70.5 bits (171), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 14/136 (10%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL 90
SFP + D + AK+ A TL+DY++ GF +IHW AN+ + + FAR +K
Sbjct: 33 SFPLKW-DKIKAAKSYAVTLIDYEATGELGFVFIHWIAANIKKNKLKWDDSFARP-EKMY 90
Query: 91 KGKNSL----VSKFLTTDYSDMYDG-YLGPYPPDKDHHYTLTVYALD------DDLSLDA 139
+ +NS+ + L Y + DG Y GP PP KDH+Y L V+ALD +DL
Sbjct: 91 QFENSMTRHATNYLLDEFYREHPDGVYFGPLPPLKDHNYRLEVFALDVENIIPEDLKNRR 150
Query: 140 GFYLNELLHAIEGHVI 155
FY ++ L I+ HV+
Sbjct: 151 LFY-DDFLELIKNHVL 165
>gi|54020502|ref|YP_115944.1| hypothetical protein mhp434 [Mycoplasma hyopneumoniae 232]
gi|53987675|gb|AAV27876.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232]
Length = 408
Score = 70.1 bits (170), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL 90
SFP + D + AK+ A TL+DY++ GF +IHW AN+ + + FAR +K
Sbjct: 32 SFPLKW-DKIKAAKSYAVTLIDYEATGELGFVFIHWIAANIKKNKLKWDDSFARP-EKMY 89
Query: 91 KGKNSLVSK----FLTTDYSDMYDG-YLGPYPPDKDHHYTLTVYALD------DDLSLDA 139
+ +NS+ L Y + DG Y GP PP KDH+Y L V+ALD +DL
Sbjct: 90 QFENSMTKHATNYLLDEFYREHPDGVYFGPLPPLKDHNYRLEVFALDVENIIPEDLKNRR 149
Query: 140 GFYLNELLHAIEGHVI 155
FY ++ L I+ HV+
Sbjct: 150 LFY-DDFLELIKNHVL 164
>gi|144575437|gb|AAZ53799.2| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448]
Length = 408
Score = 70.1 bits (170), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 14/136 (10%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL 90
SFP + D + AK+ A TL+DY++ GF +IHW AN+ + + FAR +K
Sbjct: 32 SFPLKW-DKIKAAKSYAVTLIDYEATGELGFVFIHWIAANIKKNKLKWDDSFARP-EKMY 89
Query: 91 KGKNSL----VSKFLTTDYSDMYDG-YLGPYPPDKDHHYTLTVYALD------DDLSLDA 139
+ +NS+ + L Y + DG Y GP PP KDH+Y L V+ALD +DL
Sbjct: 90 QFENSMTRHATNYLLDEFYREHPDGVYFGPLPPLKDHNYRLEVFALDVENIIPEDLKNRR 149
Query: 140 GFYLNELLHAIEGHVI 155
FY ++ L I+ HV+
Sbjct: 150 LFY-DDFLELIKNHVL 164
>gi|86606881|ref|YP_475644.1| putative phosphatidylethanolamine-binding protein [Synechococcus
sp. JA-3-3Ab]
gi|86555423|gb|ABD00381.1| putative phosphatidylethanolamine-binding protein [Synechococcus
sp. JA-3-3Ab]
Length = 206
Score = 68.9 bits (167), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 17/133 (12%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDF---ARQDQ 87
S P P ++ A + D D+ P F +HW V N+PT V+ + E A Q
Sbjct: 80 SPPLAWSGAPSETQSFALIMDDPDA-PRGTF--VHWVVYNLPTSVSSLPEGIRGDADLPQ 136
Query: 88 KHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELL 147
+ G+NS + DY GP PP H Y T+YALD LSL AG LL
Sbjct: 137 GAVHGQNS----WGRNDYG-------GPCPPSGTHRYFFTLYALDRQLSLAAGATKEALL 185
Query: 148 HAIEGHVIAQAQM 160
A+EGH++AQAQ+
Sbjct: 186 QAMEGHLLAQAQL 198
>gi|152992290|ref|YP_001358011.1| hypothetical protein SUN_0695 [Sulfurovum sp. NBC37-1]
gi|151424151|dbj|BAF71654.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 150
Score = 67.8 bits (164), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 13/131 (9%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL 90
S P ++PE ++LA + D D+ ++HW N+P+D+ + E+ D L
Sbjct: 26 SIPLIFENVPEGTRSLALIMDDPDAP---SGIFVHWVAYNIPSDLQGLPENVP--DAPLL 80
Query: 91 -KGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELLHA 149
G ++ F T GY GP PPD+ H Y + +YALD L LD G +LL
Sbjct: 81 ADGIRQGINDFGKT-------GYGGPCPPDRPHRYFIKLYALDVPLELDPGLSKEQLLGV 133
Query: 150 IEGHVIAQAQM 160
+ GHVI +A++
Sbjct: 134 MRGHVIEEAEL 144
>gi|57234690|ref|YP_181276.1| phosphatidylethanolamine-binding protein, putative [Dehalococcoides
ethenogenes 195]
gi|57225138|gb|AAW40195.1| phosphatidylethanolamine-binding protein, putative [Dehalococcoides
ethenogenes 195]
Length = 150
Score = 67.0 bits (162), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL 90
S P E + +PE K+L L D D+ + HW + N+P+D + E +
Sbjct: 26 SPPLEWMKLPEGTKSLTLILEDPDASKT----FTHWLIYNIPSDREGLPEAVPAEPNLPD 81
Query: 91 KGKNSLVSKFLTTDYSDMYDGYLGPYPP-DKDHHYTLTVYALDDDLSLDAGFYLNELLHA 149
+ L S T GY GPYPP ++ HHY ++ALD L L AG + +L+ A
Sbjct: 82 GIRQGLNSAGET--------GYTGPYPPPNRVHHYHFRLFALDTVLRLKAGSHQADLIKA 133
Query: 150 IEGHVIAQAQMDLVG 164
+EGH+I Q DL G
Sbjct: 134 MEGHIIDQT--DLTG 146
>gi|15790985|ref|NP_280809.1| hypothetical protein VNG2152C [Halobacterium sp. NRC-1]
gi|10581568|gb|AAG20289.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
Length = 216
Score = 66.6 bits (161), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 12 IPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANV 71
IPD Y + ++ N P I +PE+A TL + D D++ G ++HW V N+
Sbjct: 82 IPDRYTRSGADVNP-------PLSIAGVPEDAATLVLVVDDPDAVDPAGEVWLHWLVWNI 134
Query: 72 PTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYAL 131
P T I + + T D+ + Y GP PPD H Y +YAL
Sbjct: 135 PASRTRIPAAWTPTE-----------PTVGTNDFGER--DYGGPAPPDDTHLYRFKLYAL 181
Query: 132 DDDLSLDAGFYLNELLHAIEGHVIAQAQM 160
D L L + +A+ GHV+A Q+
Sbjct: 182 DTTLILPQDATERTVGNAVRGHVLASTQL 210
>gi|55377691|ref|YP_135541.1| phosphatidylethanolamine-binding protein [Haloarcula marismortui
ATCC 43049]
gi|55230416|gb|AAV45835.1| phosphatidylethanolamine-binding protein [Haloarcula marismortui
ATCC 43049]
Length = 229
Score = 66.2 bits (160), Expect = 7e-10, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 20/150 (13%)
Query: 12 IPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANV 71
IP+ + A+ TN P EI ++P +A +L + D D+ G + HW V N+
Sbjct: 95 IPEEHGYSAANTNP-------PLEIENVPSDASSLLLIVDDPDAEEPAGKVWDHWLVWNI 147
Query: 72 PTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYAL 131
P D+ I + + + +G+N D+ ++ G+ GP PPD++H Y +YAL
Sbjct: 148 PPDIGRIPAGW--EPDEATEGQN---------DFGEV--GWGGPNPPDREHTYRFLLYAL 194
Query: 132 DDDLSLDAGFYLNELLHAIEGHVIAQAQMD 161
D L +++ A GHV+ +AQ++
Sbjct: 195 DTTLDRSPAADKDDVYDAASGHVVEKAQLN 224
>gi|148550724|ref|YP_001260163.1| PEBP family protein [Sphingomonas wittichii RW1]
gi|148503143|gb|ABQ71396.1| PEBP family protein [Sphingomonas wittichii RW1]
Length = 617
Score = 65.9 bits (159), Expect = 8e-10, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 73/162 (45%), Gaps = 30/162 (18%)
Query: 11 IIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVAN 70
+IP+ Y++ A + A P A++ + D DS+P+ F +HW N
Sbjct: 449 LIPERYSEYADAVSPPLAWDPVP--------GAQSYVLIMEDPDSLPINPF--VHWVAWN 498
Query: 71 VPTDVTVISEDFARQDQKHL-----KGKNSLVSKFLTTDYSDMYDGYLGPYPP--DKDHH 123
+P T + E Q++ L +G+NS + GY GP PP D H
Sbjct: 499 IPPSTTSLPEGLQEQERLTLPDGMMQGRNSRNTP-----------GYFGPQPPVGDPAHR 547
Query: 124 YTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGR 165
Y V ALD L L G +++L A +GHVIA+ LVGR
Sbjct: 548 YAFQVLALDKALDLPIGADRDQVLAAAQGHVIAKGS--LVGR 587
>gi|73748373|ref|YP_307612.1| putative phosphatidylethanolamine-binding protein [Dehalococcoides
sp. CBDB1]
gi|147669153|ref|YP_001213971.1| PEBP family protein [Dehalococcoides sp. BAV1]
gi|73660089|emb|CAI82696.1| putative phosphatidylethanolamine-binding protein [Dehalococcoides
sp. CBDB1]
gi|146270101|gb|ABQ17093.1| PEBP family protein [Dehalococcoides sp. BAV1]
Length = 150
Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL 90
S P + +P + K+LA L D D+ A+ HW + N+P + + E +
Sbjct: 26 SPPVHWMQLPPDTKSLALVLEDPDTSK----AFTHWLIYNIPPNRVGLPEAVPTEPNLPD 81
Query: 91 KGKNSLVSKFLTTDYSDMYDGYLGPYPP-DKDHHYTLTVYALDDDLSLDAGFYLNELLHA 149
+ L S+ T GY GPYPP ++ HHY ++ALD +L L A + +LL A
Sbjct: 82 GVRQGLNSEGET--------GYTGPYPPPNRVHHYHFRLFALDTELKLKASCHQADLLKA 133
Query: 150 IEGHVIAQAQMDLVG 164
+EGH+I Q DL G
Sbjct: 134 MEGHIIDQT--DLTG 146
>gi|23130699|ref|ZP_00112512.1| COG1881: Phospholipid-binding protein [Nostoc punctiforme PCC
73102]
Length = 154
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 20/130 (15%)
Query: 40 PENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQD---QKHLKGKNSL 96
P+ K+ A + D D+ +IHW + N+P D+ + E A+Q + L+GKN
Sbjct: 35 PQETKSFALIVDDIDAP---NETFIHWVIYNIPADIRELPEGVAKQPKLPEGALQGKN-- 89
Query: 97 VSKFLTTDYSDMYDGYLGPYPP-DKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVI 155
++ ++ GY GP PP + H Y T+YALD L L AG +LL AI+ H++
Sbjct: 90 -------NFGEL--GYGGPCPPKNGAHRYFFTIYALDQMLDLAAGANKQQLLAAIKNHIL 140
Query: 156 AQAQMDLVGR 165
+A+ L+GR
Sbjct: 141 DKAE--LMGR 148
>gi|85858547|ref|YP_460749.1| phosphatidylethanolamine-binding protein [Syntrophus aciditrophicus
SB]
gi|85721638|gb|ABC76581.1| phosphatidylethanolamine-binding protein [Syntrophus aciditrophicus
SB]
Length = 185
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 38 DIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDF---ARQDQKHLKGKN 94
++P+ K+ A D D+ P ++HW V ++P V + E+ A + +GKN
Sbjct: 66 NVPDGTKSFALICDDPDA-PRG--TWVHWVVYDIPPSVKKLDENVRPEAELESGIRQGKN 122
Query: 95 SLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHV 154
D+ + GY GP PP H Y +YALD L+L G +LL A++GHV
Sbjct: 123 ---------DWPKI--GYGGPCPPSGTHRYYFKLYALDTMLNLAPGATKEQLLKAMKGHV 171
Query: 155 IAQAQMDLVGR 165
+A+AQ L+GR
Sbjct: 172 LAEAQ--LMGR 180
>gi|71894549|ref|YP_278657.1| hypothetical protein MS53_0538 [Mycoplasma synoviae 53]
gi|71851337|gb|AAZ43946.1| conserved hypothetical protein [Mycoplasma synoviae 53]
Length = 179
Score = 62.8 bits (151), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 21/141 (14%)
Query: 32 FPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHLK 91
F + ++P+ AK+ A TLVDY++ V G ++H+ AN+ + E+ + + +
Sbjct: 32 FDLDWKEMPK-AKSYALTLVDYEASRVIGQPFVHFAAANITSTHLKHGENLEKT--QWVM 88
Query: 92 GKNSLV----------------SKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALD-DD 134
G NS V + F + + + D Y P PPDK H YTL VY LD D
Sbjct: 89 GVNSRVPGARENSNGVHVECIPAAFKASSFEEACD-YFPPMPPDKKHLYTLKVYGLDTDK 147
Query: 135 LSLDAGFYLNELLHAIEGHVI 155
L L+ GF+L +L A+ HV+
Sbjct: 148 LDLEKGFFLGDLNRAMLDHVV 168
>gi|116327485|ref|YP_797205.1| Phospholipid binding protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116331901|ref|YP_801619.1| Phospholipid binding protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120229|gb|ABJ78272.1| Phospholipid binding protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125590|gb|ABJ76861.1| Phospholipid binding protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 181
Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 17/117 (14%)
Query: 39 IPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVS 98
+P+N K++A T+ D D+ P G + HW V N+P T I + A +K+L K ++ S
Sbjct: 60 LPKNTKSIAITVYDPDA-PT-GSGWWHWVVFNIPATTTSIPAN-AGNLEKNLLPKEAIQS 116
Query: 99 KFLTTDYSDMYDGYLGPYPPD--KDHHYTLTVYALDDDLSLDA-------GFYLNEL 146
+ TD+ GY GP PP K H Y TVYAL D +S D GFY+N L
Sbjct: 117 R---TDFG--MPGYGGPCPPQGHKPHRYYFTVYALKDRISADQNSSGALIGFYINSL 168
>gi|75910310|ref|YP_324606.1| YbhB and YbcL [Anabaena variabilis ATCC 29413]
gi|75704035|gb|ABA23711.1| YbhB and YbcL [Anabaena variabilis ATCC 29413]
Length = 200
Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 40 PENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSK 99
PE ++LA + D D+ ++HW + ++P V RQ +H+ +L S
Sbjct: 83 PEETQSLALIVDDPDAPR---HTFVHWVIYDIPPTV--------RQLPEHITATKTLPSG 131
Query: 100 FLT--TDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQ 157
+ D+ + GY GP PP H Y +YALD +L L G ++L A++GHV+A
Sbjct: 132 GVQGKNDFGKL--GYGGPCPPSGTHRYFFKLYALDKNLGLPPGATKEQILQAMKGHVLAT 189
Query: 158 AQM 160
A++
Sbjct: 190 AEL 192
>gi|115464405|ref|NP_001055802.1| Os05g0468800 [Oryza sativa (japonica cultivar-group)]
gi|48843750|gb|AAT47009.1| putative cold regulated protein [Oryza sativa (japonica
cultivar-group)]
gi|113579353|dbj|BAF17716.1| Os05g0468800 [Oryza sativa (japonica cultivar-group)]
gi|125552667|gb|EAY98376.1| hypothetical protein OsI_019609 [Oryza sativa (indica
cultivar-group)]
Length = 161
Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCG--FAYIHWTVANVPTDVTVISEDFARQDQK 88
S P E +P+ ++LA + D D+ G + HW VAN+P V + E F+ ++
Sbjct: 36 SPPVEWYGVPDGTRSLALVVHDVDAPDPDGPIVPWTHWVVANIPPSVKGLPEGFSGKEGA 95
Query: 89 HLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELLH 148
+ + D+ G+ GP PP + H +YALDD+++ D +L+
Sbjct: 96 AAREYGGIQEG--VNDWKQ--PGWRGPIPPSRGHRIQFKLYALDDEVTKD------KLMD 145
Query: 149 AIEGHVIAQAQM 160
AIEGHV+ +A++
Sbjct: 146 AIEGHVLGEAEL 157
>gi|14591085|ref|NP_143160.1| hypothetical protein PH1269 [Pyrococcus horikoshii OT3]
gi|6686153|sp|O58984|Y1269_PYRHO UPF0098 protein PH1269
gi|3257689|dbj|BAA30372.1| 198aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 198
Score = 61.6 bits (148), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 29/159 (18%)
Query: 9 NHIIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTV 68
N IP Y + + N P +I + +N K+L +VD P+ F HW
Sbjct: 55 NEFIPAKYTCEGVDINP-------PLKIEGLSDNVKSLV-IIVDDPDAPMGTFT--HWIA 104
Query: 69 ANVPTDVTVISEDFARQDQKH-----LKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKD-- 121
N+P VT I E +Q + ++G+N D+ + GY GP PP
Sbjct: 105 WNIPP-VTEIPEGIPKQGEVDKPIHIIQGRN---------DFGRI--GYNGPCPPRGHGV 152
Query: 122 HHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQM 160
HHY VYALD L+L G EL A+EGHVI ++
Sbjct: 153 HHYHFKVYALDTTLNLKPGASRKELEKAMEGHVIQYGEL 191
>gi|20090292|ref|NP_616367.1| hypothetical protein MA1432 [Methanosarcina acetivorans C2A]
gi|19915291|gb|AAM04847.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
C2A]
Length = 203
Score = 61.2 bits (147), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 26/152 (17%)
Query: 9 NHIIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTV 68
N IP Y N P E DIPE ++L + D D+ P+ F HW V
Sbjct: 71 NGTIPRKYTCNGENINP-------PLEFTDIPEGTESLVLIMDDPDA-PMNPFT--HWIV 120
Query: 69 ANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTV 128
N+ E A+ ++ + G + ++ ++ GY GP PP H + V
Sbjct: 121 WNI--------EPVAKIEEDSIPGIEGI------NNFREI--GYGGPCPPSGTHRFFFRV 164
Query: 129 YALDDDLSLDAGFYLNELLHAIEGHVIAQAQM 160
YALD L L AG EL + GH+IA+ ++
Sbjct: 165 YALDRQLELKAGAGRKELESEMIGHIIAEGEL 196
>gi|15618786|ref|NP_225072.1| hypothetical protein CPn0877 [Chlamydophila pneumoniae CWL029]
gi|15836410|ref|NP_300934.1| hypothetical protein CPj0877 [Chlamydophila pneumoniae J138]
gi|16752162|ref|NP_445529.1| hypothetical protein CP0992 [Chlamydophila pneumoniae AR39]
gi|33242237|ref|NP_877178.1| hypothetical protein CpB0906 [Chlamydophila pneumoniae TW-183]
gi|6686134|sp|Q9Z729|Y877_CHLPN UPF0098 protein CPn_0877/CP_0992/CPj0877/CpB0906
gi|4377195|gb|AAD19015.1| YbcL family-CT736 hypothetical protein [Chlamydophila pneumoniae
CWL029]
gi|7189906|gb|AAF38771.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8979251|dbj|BAA99085.1| YbcL family-CT736 hypothetical protein [Chlamydophila pneumoniae
J138]
gi|33236748|gb|AAP98835.1| hypothetical protein CpB0906 [Chlamydophila pneumoniae TW-183]
Length = 150
Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYD---SIPVCGFAYIHWTVANVPTDVTVISEDFARQDQ 87
S P VD+P A++LA + D D I G +IHW V N+ T +T ++E
Sbjct: 26 SPPLTFVDVPGAAQSLALIVEDPDVPKEIRSDGL-WIHWIVYNLSTTITNLAE------- 77
Query: 88 KHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELL 147
G + L T +Y+G P PPDK H Y T++ALD L + ++L
Sbjct: 78 ----GAEIFAVQGLNTSGKPVYEG---PCPPDKQHRYFFTLFALDVVLPEEENVTRDQLY 130
Query: 148 HAIEGHVIAQAQM 160
A+E H+I QA++
Sbjct: 131 EAMEFHIIEQAEL 143
>gi|15678301|ref|NP_275416.1| hypothetical protein MTH273 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6686082|sp|O26373|Y273_METTH UPF0098 protein MTH_273
gi|2621324|gb|AAB84779.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 151
Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISE---DFARQDQ 87
S P +P AK+LA D D+ + HW + N+P D T + E D R
Sbjct: 26 SPPLSWDGVPGEAKSLALICDDPDAPSK---VWTHWVIFNIPPDSTGLEENVPDAGRLPD 82
Query: 88 KHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELL 147
++G N D + GY GP PP H Y +YALD L L+ G ++L
Sbjct: 83 GSVQGYN---------DSGTL--GYRGPCPPSGVHRYFFRLYALDTVLDLEPGASKEDVL 131
Query: 148 HAIEGHVIAQAQM 160
A+EGHV+ +A++
Sbjct: 132 EAMEGHVLGEAKL 144
>gi|24216538|ref|NP_714019.1| Phosphatidylethanolamine-binding family protein [Leptospira
interrogans serovar Lai str. 56601]
gi|45658897|ref|YP_002983.1| hypothetical protein LIC13071 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24197853|gb|AAN51037.1|AE011539_1 Phosphatidylethanolamine-binding family protein [Leptospira
interrogans serovar Lai str. 56601]
gi|45602142|gb|AAS71620.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 181
Score = 60.8 bits (146), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 17/117 (14%)
Query: 39 IPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVS 98
+P++ K++A T+ D D+ P G + HW V N+P+ +T I + A +K+L K ++ S
Sbjct: 60 LPKDTKSIALTVYDPDA-PT-GSGWWHWVVFNLPSTITSIPAN-AGNLEKNLLPKEAIQS 116
Query: 99 KFLTTDYSDMYDGYLGPYPPD--KDHHYTLTVYALDDDLSLDA-------GFYLNEL 146
+ TD+ GY GP PP K H Y TVYAL D + D GFY+N+L
Sbjct: 117 R---TDFGT--SGYGGPCPPKGHKPHRYYFTVYALKDKIPADQNSSGALIGFYINQL 168
>gi|21228502|ref|NP_634424.1| hypothetical protein MM_2400 [Methanosarcina mazei Go1]
gi|20906987|gb|AAM32096.1| hypothetical protein MM_2400 [Methanosarcina mazei Go1]
Length = 194
Score = 60.5 bits (145), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 9 NHIIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTV 68
N IP Y N P E DIPE ++L + D DS P+ F HW V
Sbjct: 62 NSTIPRKYTCNGENINP-------PLEFADIPEETESLVLIMDDPDS-PMNPFT--HWIV 111
Query: 69 ANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTV 128
N+ E A+ ++ + G + ++ + GY GP P H Y V
Sbjct: 112 WNI--------EPVAKIEEDSIPGIEGM------NNFRKI--GYGGPCPSSGTHRYFFKV 155
Query: 129 YALDDDLSLDAGFYLNELLHAIEGHVIAQAQM 160
YALD L L AG EL + GH+IA+ ++
Sbjct: 156 YALDRKLELKAGSGRKELESEMIGHIIAEGEL 187
>gi|57641140|ref|YP_183618.1| phospholipid-binding protein, PBP family [Thermococcus kodakarensis
KOD1]
gi|57159464|dbj|BAD85394.1| phospholipid-binding protein, PBP family [Thermococcus kodakarensis
KOD1]
Length = 182
Score = 59.7 bits (143), Expect = 6e-08, Method: Composition-based stats.
Identities = 53/156 (33%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 12 IPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANV 71
IP Y + +TN P I +IP AK+L +VD P F HW N+
Sbjct: 42 IPKEYTCEGDDTNP-------PIYIGNIPAEAKSLV-IIVDDPDAPAGTFT--HWIAWNI 91
Query: 72 PTDVTVISEDFARQDQKH-----LKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKD--HHY 124
P V I R+ + ++GKN D+ + GY GP PP HHY
Sbjct: 92 PP-VGEIPSWVPRKPETDEPFHIVQGKN---------DFGRI--GYNGPCPPRGHGVHHY 139
Query: 125 TLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQM 160
VYALD +L L+ G EL A+EGHVIA ++
Sbjct: 140 HFKVYALDTELKLEPGSSRKELEKAMEGHVIAWGEV 175
>gi|73670279|ref|YP_306294.1| hypothetical protein Mbar_A2814 [Methanosarcina barkeri str.
Fusaro]
gi|72397441|gb|AAZ71714.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 194
Score = 58.9 bits (141), Expect = 9e-08, Method: Composition-based stats.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 9 NHIIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTV 68
N IP Y N P E IPE A++L +VD P F HW V
Sbjct: 62 NGSIPGKYTCDGQNINP-------PLEFEGIPEEAESLV-IIVDDPDAPTKTFT--HWIV 111
Query: 69 ANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTV 128
N+ E A+ ++ + G L D+ + GY GP PP H Y V
Sbjct: 112 WNI--------EPVAKIEEDSIPGIEGL------NDFKKI--GYGGPCPPSGTHRYFFRV 155
Query: 129 YALDDDLSLDAGFYLNELLHAIEGHVIAQAQM 160
YALD +L L AG L + + GH+IA+ ++
Sbjct: 156 YALDKNLDLKAGAGRKGLENEMIGHIIAEGEL 187
>gi|94265209|ref|ZP_01288970.1| YbhB and YbcL [delta proteobacterium MLMS-1]
gi|93454299|gb|EAT04609.1| YbhB and YbcL [delta proteobacterium MLMS-1]
Length = 151
Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 1 MKIHVPFKNH--IIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
M++ P H +IP Y N P I +PE A +L + D D +P
Sbjct: 1 MQLTSPAFAHQGLIPARYTCDGDNVNP-------PLVIAGVPEQAVSLVLIMDDPD-VPK 52
Query: 59 ---CGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGP 115
+ HW V ++P I+E+ + L N+L Y GP
Sbjct: 53 HLRPDGMWDHWVVFDIPPQTREIAENSEPEGVHGLGTGNNL--------------EYFGP 98
Query: 116 YPPDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGR 165
PPD++H Y +YALD L+L G E+ A+ GH++A+AQ L+GR
Sbjct: 99 CPPDREHRYFFKLYALDCKLNLPQGSGKAEVEQAMAGHILAEAQ--LLGR 146
>gi|10799810|emb|CAC12881.1| cold-regulated protein [Hordeum vulgare subsp. vulgare]
Length = 164
Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDS---IPVCGFAYIHWTVANVPTDVTVISEDFARQDQ 87
S P E +P A++LA + D D+ +P + HW VAN+ + + E F+
Sbjct: 36 SPPLEWYGVPGGARSLALVVQDIDADERVP-----WTHWVVANISPEEKGLPEGFSGAGG 90
Query: 88 KHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELL 147
G + + + D+ G+ GP P H +YALDD LSL +++++
Sbjct: 91 NANAGGEGGLQEGVN-DWKQ--PGWRGPVPDSHGHRIQFRLYALDDVLSLGNKVTVDKVM 147
Query: 148 HAIEGHVIAQAQMDLV 163
AIEGHV+ +A++ V
Sbjct: 148 EAIEGHVLGEAELTAV 163
>gi|78045740|ref|YP_361915.1| putative phosphatidylethanolamine-binding protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|78034170|emb|CAJ21815.1| putative phosphatidylethanolamine-binding protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 203
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 63 YIHWTVANVPTDVTVI-----SEDFARQDQKH-------LKGKNSLVSKFL-TTDYSDMY 109
++HW +A++P DV I S+ F + ++ +G NS F D + Y
Sbjct: 78 FVHWAMADIPADVHEIAAGSCSDGFVVKGKQQPAGPAGARQGLNSYTQWFAGNADMAGHY 137
Query: 110 DGYLGPYPPDKD---HHYTLTVYALD-DDLSLDAGFYLNELLHAIEGHVIAQAQM 160
GY GPYPP D H Y V+ALD LSL F ++L A++GHV+A+A +
Sbjct: 138 RGYDGPYPPFNDLRVHRYFFRVFALDVAKLSLPDSFTAADVLSAMQGHVLAEAAL 192
>gi|154249449|ref|YP_001410274.1| PEBP family protein [Fervidobacterium nodosum Rt17-B1]
gi|154153385|gb|ABS60617.1| PEBP family protein [Fervidobacterium nodosum Rt17-B1]
Length = 185
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 29/162 (17%)
Query: 7 FKN-HIIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIH 65
FKN IP YA + + N I ++P+NAK++A D D+ P+ F +H
Sbjct: 38 FKNGEFIPKKYACEGEDINP-------ELVITNVPKNAKSIAIICDDPDA-PIGTF--VH 87
Query: 66 WTVANVPTD--VTVISEDFARQDQ---KHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDK 120
W + N+P D I E + ++ ++G N D+ + GY GP PP
Sbjct: 88 WVIWNIPVDGDSVKIPEGLKKLEKLPDGTMQGYN---------DFGKI--GYNGPCPPRG 136
Query: 121 D--HHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQM 160
HHY VYALD L L +L A++GH+I A++
Sbjct: 137 HGVHHYHFKVYALDTLLELKGKVKKADLEKAMKGHIIESAEI 178
>gi|126466432|ref|YP_001041541.1| PEBP family protein [Staphylothermus marinus F1]
gi|126015255|gb|ABN70633.1| PEBP family protein [Staphylothermus marinus F1]
Length = 199
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 18/131 (13%)
Query: 30 KSFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQ--DQ 87
+SFP I +I EN ++L L+ YD G Y HW + N+P + T I E+ + +
Sbjct: 73 ESFPLRIENISENTRSL--LLIMYDPDAPHGVFY-HWILYNIPPNTTQIPENIPKTPITK 129
Query: 88 KHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDK--DHHYTLTVYALDDDLSLDAGFYLNE 145
L+G+N+ GY GP PP H Y + V AL+ L L G +NE
Sbjct: 130 YGLQGRNNFGKI-----------GYGGPCPPRGFGSHRYYIIVLALNTKLKLPPGANINE 178
Query: 146 LLHAIEGHVIA 156
++ + HVIA
Sbjct: 179 VIDEAKNHVIA 189
>gi|14521358|ref|NP_126834.1| hypothetical protein PAB0765 [Pyrococcus abyssi GE5]
gi|14195478|sp|Q9UZJ3|Y1153_PYRAB UPF0098 protein PYRAB11530
gi|5458576|emb|CAB50064.1| Bacterial homolog of mammalian raf kinase inhibitor [Pyrococcus
abyssi GE5]
Length = 186
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 73/168 (43%), Gaps = 30/168 (17%)
Query: 1 MKIHVPFKN-HIIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPVC 59
+K+ F N IP Y + + N P I I ENAK+L +VD P+
Sbjct: 34 VKVSSVFGNDEFIPAKYTCEGIDVNP-------PLRIEGISENAKSLV-IIVDDPDAPLG 85
Query: 60 GFAYIHWTVANVPTDVTVISEDFARQDQ-----KHLKGKNSLVSKFLTTDYSDMYDGYLG 114
F HW N+P V I E +Q + ++G+N D+ + GY G
Sbjct: 86 TFT--HWIAWNIPP-VEEIPEGIPKQGEVEKPIHMIQGRN---------DFGRI--GYNG 131
Query: 115 PYPPDKD--HHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQM 160
P PP HHY VY LD L+L G EL A+EGH+I ++
Sbjct: 132 PCPPRGHGVHHYHFKVYVLDTTLNLRPGATREELEKAMEGHIIQFGEL 179
>gi|15605469|ref|NP_220255.1| hypothetical protein CT736 [Chlamydia trachomatis D/UW-3/CX]
gi|76789476|ref|YP_328562.1| ATP/GTP binding protein [Chlamydia trachomatis A/HAR-13]
gi|6686128|sp|O84741|Y736_CHLTR UPF0098 protein CT_736
gi|3329194|gb|AAC68331.1| hypothetical protein CT_736 [Chlamydia trachomatis D/UW-3/CX]
gi|76168006|gb|AAX51014.1| ATP/GTP binding protein [Chlamydia trachomatis A/HAR-13]
Length = 150
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVC--GFAYIHWTVANVPTDVTVISEDFARQDQK 88
S P D+P AK+L + D D P +IHW V N+ V+ ++E
Sbjct: 26 SPPLSFSDVPREAKSLVLIVEDPDVPPSVREDGLWIHWIVYNLSPVVSNLAE-------- 77
Query: 89 HLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELLH 148
G + L T GY P PPD H Y YALD LS + G +LL
Sbjct: 78 ---GAQIFAVQGLNTAGEI---GYCPPCPPDAKHRYYFYAYALDVVLSDEEGVTKEQLLE 131
Query: 149 AIEGHVIAQAQM 160
A++GH+IA A++
Sbjct: 132 AMDGHIIATAEL 143
>gi|31544638|ref|NP_853216.1| predicted phospholipid-binding protein [Mycoplasma gallisepticum R]
gi|31541484|gb|AAP56784.1| predicted phospholipid-binding protein [Mycoplasma gallisepticum R]
Length = 225
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 44/160 (27%)
Query: 42 NAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDF------------ARQDQKH 89
NAK+ A + D+D+ V GF++IHW N+ T+ ++ + A +
Sbjct: 55 NAKSYAVIVEDFDAAAVIGFSFIHWIAVNIKTNHIAENQSYLDHNKWLESKQSAYGENLL 114
Query: 90 LKGKNSLVSKFLTTDYSDMYD------------------GYLGPYPPDKDHHYTLTVYAL 131
+G NS V+K L + D Y G YPP+ DH YT+ VY L
Sbjct: 115 WQGHNSSVNKTLVANNKTNKDLGGILPEGFTSTSLENSLMYFGCYPPNADHTYTVVVYGL 174
Query: 132 DDDLS--------------LDAGFYLNELLHAIEGHVIAQ 157
D D S L+ +Y+ + + AI HV+ +
Sbjct: 175 DVDASELTYHKNHRTQKYHLNKPYYVGDFMQAIHKHVVGK 214
>gi|21240974|ref|NP_640556.1| hypothetical protein XAC0200 [Xanthomonas axonopodis pv. citri str.
306]
gi|21106260|gb|AAM35092.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 203
Score = 57.4 bits (137), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 63 YIHWTVANVPTDVTVI-----SEDFARQDQKH-------LKGKNSLVSKFL-TTDYSDMY 109
++HW +A++P DV I S+ F + ++ +G NS F D + Y
Sbjct: 78 FVHWAMADIPADVHEIAAGSCSDGFVVKGKQQPAGPAGARQGLNSYTQWFAGNADMAGDY 137
Query: 110 DGYLGPYPPDKD---HHYTLTVYALD-DDLSLDAGFYLNELLHAIEGHVIAQAQM 160
GY GPYPP D H Y V+ALD L L + F ++L A++GHV+A+A +
Sbjct: 138 RGYDGPYPPFNDLRVHRYFFRVFALDVAKLGLPSSFTAADVLSAMQGHVLAEAAL 192
>gi|26017213|dbj|BAC41494.1| cold regulated protein [Triticum aestivum]
Length = 165
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDS---IPVCGFAYIHWTVANVPTDVTVISEDFARQDQ 87
S P E +P+ ++LA + D D+ +P + HW V N+ + + E F+
Sbjct: 36 SPPLEWYGVPDGTRSLAVVVQDVDADERVP-----WTHWVVVNISPEEKGLPEGFSGAGG 90
Query: 88 KHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELL 147
G + D+ G+ GP P H +YALDD LSL +++++
Sbjct: 91 NANAGGGDGGVQEGVNDWKQ--PGWRGPVPDSHGHRIQFRLYALDDVLSLGNKVTVDKVM 148
Query: 148 HAIEGHVIAQAQMDLV 163
AIEGHV+ +A++ V
Sbjct: 149 EAIEGHVLGEAEITAV 164
>gi|94268252|ref|ZP_01291122.1| YbhB and YbcL [delta proteobacterium MLMS-1]
gi|93451687|gb|EAT02466.1| YbhB and YbcL [delta proteobacterium MLMS-1]
Length = 151
Score = 56.6 bits (135), Expect = 5e-07, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 1 MKIHVPFKNH--IIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
M++ P H +IP Y N P I +PE A +L + D D +P
Sbjct: 1 MQLTSPAFAHQGLIPARYTCDGDNVNP-------PLVIAGVPEQAVSLVLIMDDPD-VPK 52
Query: 59 ---CGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGP 115
+ HW V ++P I+E+ + L N+L Y GP
Sbjct: 53 HLRPDGMWDHWVVFDIPPQTREIAENSEPEGVHGLGTGNNL--------------EYFGP 98
Query: 116 YPPDKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQMDLVGR 165
PPD++H Y +YALD L+L G + A+ GH++A+AQ L+GR
Sbjct: 99 CPPDREHRYFFKLYALDCKLNLPQGSGKAAVEQAMAGHILAEAQ--LMGR 146
>gi|147921235|ref|YP_684952.1| hypothetical protein RCIX127 [uncultured methanogenic archaeon
RC-I]
gi|110620348|emb|CAJ35626.1| conserved hypothetical protein [uncultured methanogenic archaeon
RC-I]
Length = 157
Score = 56.6 bits (135), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 60 GFAYIHWTVANVPTDVTVISEDFARQ---DQKHLKGKNSLVSKFLTTDYSDMYDGYLGPY 116
G + HW + N+P+ T + ++ D ++ KNS+ + GY GP
Sbjct: 58 GGTFTHWIMYNIPSGFTSLPAGVRQEEELDYGAIQSKNSMGNP-----------GYNGPS 106
Query: 117 PP-DKDHHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQM 160
PP K H Y +YALD L+L AG ++LL A++GHVIA+ +
Sbjct: 107 PPPGKPHRYIFKLYALDARLNLPAGITKDQLLTAMKGHVIAEGSL 151
>gi|24113311|ref|NP_707821.1| hypothetical protein SF1979 [Shigella flexneri 2a str. 301]
gi|26248202|ref|NP_754242.1| Protein ybcL precursor [Escherichia coli CFT073]
gi|30063376|ref|NP_837547.1| hypothetical protein S4820 [Shigella flexneri 2a str. 2457T]
gi|91211153|ref|YP_541139.1| hypothetical protein UTI89_C2135 [Escherichia coli UTI89]
gi|110642041|ref|YP_669771.1| protein YbcL precursor [Escherichia coli 536]
gi|117624075|ref|YP_852988.1| DLP12 prophage; predicted kinase inhibitor [Escherichia coli APEC
O1]
gi|26108606|gb|AAN80809.1|AE016762_62 Protein ybcL precursor [Escherichia coli CFT073]
gi|24052321|gb|AAN43528.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30041628|gb|AAP17356.1| hypothetical protein S4820 [Shigella flexneri 2a str. 2457T]
gi|91072727|gb|ABE07608.1| conserved hypothetical protein [Escherichia coli UTI89]
gi|110343633|gb|ABG69870.1| protein YbcL precursor [Escherichia coli 536]
gi|115513199|gb|ABJ01274.1| DLP12 prophage; predicted kinase inhibitor [Escherichia coli APEC
O1]
Length = 183
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 20/102 (19%)
Query: 40 PENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL-----KGKN 94
PE K+ A T+ D D+ P G + HWTVAN+P VT + D R+D L +G+N
Sbjct: 61 PEGTKSFAVTVYDPDA-PT-GSGWWHWTVANIPATVTYLPTDAGRRDGTKLPTGAVQGRN 118
Query: 95 SLVSKFLTTDYSDMYDGYLGPYPP--DKDHHYTLTVYALDDD 134
D+ Y G+ G PP DK HHY V+AL D
Sbjct: 119 ---------DFG--YAGFGGACPPKGDKPHHYQFKVWALKTD 149
>gi|157067086|gb|ABV06341.1| putative phosphatidylethanolamine-binding protein [Escherichia coli
HS]
Length = 183
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 20/102 (19%)
Query: 40 PENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL-----KGKN 94
PE K+ A T+ D D+ P G + HWTVAN+P VT + D R+D L +G+N
Sbjct: 61 PEGTKSFAVTVYDPDA-PT-GSGWWHWTVANIPATVTYLPADAGRRDGTKLPTGAVQGRN 118
Query: 95 SLVSKFLTTDYSDMYDGYLGPYPP--DKDHHYTLTVYALDDD 134
D+ Y G+ G PP DK HHY V+AL D
Sbjct: 119 ---------DFG--YAGFGGACPPKGDKPHHYQFKVWALKTD 149
>gi|15834734|ref|NP_296493.1| hypothetical protein TC0109 [Chlamydia muridarum Nigg]
gi|14195348|sp|Q9PLJ0|Y109_CHLMU UPF0098 protein TC_0109
gi|7190144|gb|AAF38988.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 150
Score = 55.8 bits (133), Expect = 8e-07, Method: Composition-based stats.
Identities = 46/136 (33%), Positives = 62/136 (45%), Gaps = 24/136 (17%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVC---GFAYIHWTVANVPTDVTVISED---FAR 84
S P DIP AK+LA + D D +P +IHW V N+ V+ ++E FA
Sbjct: 26 SPPLSFSDIPSEAKSLALIVEDPD-VPANVREDGLWIHWIVYNLSPIVSNLAEGAQIFAV 84
Query: 85 QDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLN 144
Q G N+ GY P PPD H Y YALD L + G
Sbjct: 85 Q------GINTAGEI-----------GYCPPCPPDAKHRYYFYAYALDVVLPEEEGVTKE 127
Query: 145 ELLHAIEGHVIAQAQM 160
+LL A+EGH++A A++
Sbjct: 128 QLLEAMEGHILATAEL 143
>gi|31544639|ref|NP_853217.1| predicted phospholipid-binding protein [Mycoplasma gallisepticum R]
gi|31541485|gb|AAP56785.1| predicted phospholipid-binding protein [Mycoplasma gallisepticum R]
Length = 209
Score = 55.8 bits (133), Expect = 8e-07, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 38 DIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLV 97
D E AK+ A +VDY++ V G ++IHW VANV + + + ++ ++G NS
Sbjct: 67 DKIEGAKSYAVVMVDYEASRVIGQSFIHWVVANVKENKLAYAANI--NNKSIVQGLNSTA 124
Query: 98 SKFLTT--------------DYSDMYDGYLGPYPPDKDHHYTLTVYALD-DDLSLDAGFY 142
+ + ++ YL P PPD H YTL VY LD D + L F
Sbjct: 125 QGQTESSKGVIIECVPGAFKNTAEAASDYLPPLPPDDTHLYTLRVYGLDVDHVDLPKHFS 184
Query: 143 LNELLHAIEGHVIAQAQM 160
L +L I H + + ++
Sbjct: 185 LTDLNQKIIRHTVGEHEL 202
>gi|58584116|ref|YP_203132.1| hypothetical protein XOO4493 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58428710|gb|AAW77747.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 249
Score = 55.8 bits (133), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 17/115 (14%)
Query: 63 YIHWTVANVPTDVTVI-----SEDFARQDQKH-------LKGKNSLVSKFL-TTDYSDMY 109
++HW +A++ DV I S+ F + ++ +G NS F D + Y
Sbjct: 124 FVHWAMADISADVHEIAAGSCSDGFVVKGKQQPPGPAGARQGLNSYTQWFAGNADMAGDY 183
Query: 110 DGYLGPYPPDKD---HHYTLTVYALD-DDLSLDAGFYLNELLHAIEGHVIAQAQM 160
GY GPYPP D H Y V+ALD LSL F ++L AI+GHV+A+A +
Sbjct: 184 RGYDGPYPPFNDLRMHRYFFRVFALDVAKLSLPDRFTAADVLSAIQGHVLAEAAL 238
>gi|74312475|ref|YP_310894.1| hypothetical protein SSON_1993 [Shigella sonnei Ss046]
gi|73855952|gb|AAZ88659.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 183
Score = 55.8 bits (133), Expect = 9e-07, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 20/102 (19%)
Query: 40 PENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL-----KGKN 94
PE K+ A T+ D D+ P G + HWTVAN+P VT + D R+D L +G+N
Sbjct: 61 PEGTKSFAVTVYDPDA-PT-GSGWWHWTVANIPATVTYLPADAGRRDGTKLPTGAVQGRN 118
Query: 95 SLVSKFLTTDYSDMYDGYLGPYPP--DKDHHYTLTVYALDDD 134
D+ Y G+ G PP DK HHY ++AL D
Sbjct: 119 ---------DFG--YAGFGGACPPKGDKPHHYQFKIWALKTD 149
>gi|126353305|ref|ZP_01710316.1| YbhB and YbcL [Caldivirga maquilingensis IC-167]
gi|126311959|gb|EAZ64413.1| YbhB and YbcL [Caldivirga maquilingensis IC-167]
Length = 154
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 1 MKIHVP-FKNH-IIPDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV 58
M+I P F+N IP Y + + A++ F D P N K + D D+ P+
Sbjct: 1 MRIESPAFRNEDTIPVKYTCDGDDVSP--ALRWF-----DPPPNVKGFVLIMEDPDA-PM 52
Query: 59 CGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPP 118
F HW + N+P ++ + E+ ++ + G + D+ + GY GP PP
Sbjct: 53 GTFT--HWILYNIPPSLSELPENIPKRPEVQGIGMQGV------NDFGRI--GYGGPCPP 102
Query: 119 DKD--HHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQA 158
H Y +YALD L+L G L+E+ A+ GHVIA+A
Sbjct: 103 KTHPPHRYYFRLYALDSMLNLKPGAGLSEVKRAMNGHVIAEA 144
>gi|92112789|ref|YP_572717.1| YbhB and YbcL [Chromohalobacter salexigens DSM 3043]
gi|91795879|gb|ABE58018.1| YbhB and YbcL [Chromohalobacter salexigens DSM 3043]
Length = 208
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 38 DIPENAKTLAWTLVDYD-------------SIP--VCGFAYIHWTVANVPTDVTVISE-- 80
D+P ++L +VD D S+P + + HW + ++P++VT I E
Sbjct: 43 DVPAGTRSLVLLVVDTDAPSDPSDVNQEGRSVPAELPRSDFYHWVLIDIPSEVTEIPEGE 102
Query: 81 ---------DFARQDQKHLKGKNSLVSKFLTTDYSD-MYDGYLGPYPPDKD---HHYTLT 127
+ ++G NS F+ + + +Y GY GP PP D H Y T
Sbjct: 103 DADGVVAKGKAPGPTSQGVRGINSYTDFFIDDEQLEGIYGGYDGPCPPWNDSLVHRYYFT 162
Query: 128 VYALD-DDLSLDAGFYLNELLHAIEGHVIAQAQM 160
VYALD L L F +E+L A++GHV+ QA +
Sbjct: 163 VYALDVASLELQGEFTGDEVLEAMQGHVLDQASV 196
>gi|145622040|ref|ZP_01778004.1| PEBP family protein [Petrotoga mobilis SJ95]
gi|144947665|gb|EDJ82694.1| PEBP family protein [Petrotoga mobilis SJ95]
Length = 156
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 1 MKIHVP-FKNH-IIPDAYAKKASETNKGYAVKSFPFEIVD-IPENAKTLAWTLVDYDSIP 57
+KI P FKN+ IP Y + + + P +++ IPE AK+LA + D D+ P
Sbjct: 3 LKISSPVFKNNDYIPSTYTCEGRDIS--------PILLIEGIPEKAKSLALIMDDPDA-P 53
Query: 58 VCGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYP 117
+ F +HW N+ + E+ + K N L S GY+GP P
Sbjct: 54 MGTF--VHWVAWNIE-----LVEEIPERIPKEYSVTNPL--SLNQGKNSAHQTGYMGPCP 104
Query: 118 PDKD--HHYTLTVYALDDDLSLDAGFYLNELLHAIEGHVIAQAQM 160
P HHY +YALD L L +LL A+EGH+I +A++
Sbjct: 105 PVGHGVHHYHFKLYALDTTLDLPQNTTKEDLLKAMEGHIIEKAEI 149
>gi|29840646|ref|NP_829752.1| conserved hypothetical protein TIGR00481 [Chlamydophila caviae
GPIC]
gi|29834996|gb|AAP05630.1| conserved hypothetical protein TIGR00481 [Chlamydophila caviae
GPIC]
Length = 150
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFA---YIHWTVANVPTDVTVISEDFARQDQ 87
S P DIP AK++A + D D +P A +IHW V N+ +T + E
Sbjct: 26 SPPLIFKDIPAEAKSIALIVEDPD-VPQNLRADGLWIHWLVYNLSPTITELVE------- 77
Query: 88 KHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELL 147
G N + L T Y+G P PPD+ H Y YALD L + ++LL
Sbjct: 78 ----GANIFAVQGLNTSGKACYEG---PCPPDRQHRYFFYCYALDTILPSEENVTKDQLL 130
Query: 148 HAIEGHVIAQAQM 160
+E HVI A++
Sbjct: 131 EVMESHVIDNAEL 143
>gi|84625890|ref|YP_453262.1| hypothetical protein XOO_4233 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84369830|dbj|BAE70988.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 203
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 17/115 (14%)
Query: 63 YIHWTVANVPTDVTVI-----SEDFARQDQKH-------LKGKNSLVSKFL-TTDYSDMY 109
++HW +A++ DV I S+ F + ++ +G NS F D + Y
Sbjct: 78 FVHWAMADISADVHEIAAGSCSDGFVVKGKQQPPGPAGARQGLNSYTQWFAGNADMAGDY 137
Query: 110 DGYLGPYPPDKD---HHYTLTVYALD-DDLSLDAGFYLNELLHAIEGHVIAQAQM 160
GY GPYPP D H Y V+ALD LSL F ++L AI+GHV+A+A +
Sbjct: 138 RGYDGPYPPFNDLRMHRYFFRVFALDVAKLSLPDRFTAADVLSAIQGHVLAEAAL 192
>gi|152991050|ref|YP_001356772.1| hypothetical protein NIS_1307 [Nitratiruptor sp. SB155-2]
gi|151422911|dbj|BAF70415.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 150
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL 90
S P ++P+ AK+LA + D D+ P+ F +HW + ++P+ + + E +
Sbjct: 26 SIPLIFKNVPQEAKSLAIIMDDPDA-PMGVF--VHWVIYDIPSSLEGLPEGIPNVPELEY 82
Query: 91 KGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELLHAI 150
K + D+ + GY GP PP+ H Y + +YALD L+L G +LL I
Sbjct: 83 GIKQGI------NDFGKI--GYGGPCPPNGVHRYFIKLYALDRVLNLQPGVSKRDLLEII 134
Query: 151 EGHVIAQA 158
+ VI +A
Sbjct: 135 KPFVIDEA 142
>gi|62185460|ref|YP_220245.1| hypothetical protein CAB858 [Chlamydophila abortus S26/3]
gi|62148527|emb|CAH64298.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
Length = 150
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 18/133 (13%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYD---SIPVCGFAYIHWTVANVPTDVTVISEDFARQDQ 87
S P D+P+ AK++A + D D ++ G +IHW V N+ +T + E
Sbjct: 26 SPPLIFKDVPQEAKSMALIMEDPDVPKNLREDGL-WIHWIVYNLSPAITELVE------- 77
Query: 88 KHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELL 147
G N + L T Y+G P PPD+ H Y Y LD L ++ ++LL
Sbjct: 78 ----GANIYAVQGLNTSGKACYEG---PCPPDRQHRYYFYCYVLDVILPIEENVTRDQLL 130
Query: 148 HAIEGHVIAQAQM 160
+E HVI A++
Sbjct: 131 EVMESHVIDTAEL 143
>gi|89897931|ref|YP_515041.1| hypothetical protein CF0124 [Chlamydophila felis Fe/C-56]
gi|89331303|dbj|BAE80896.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56]
Length = 150
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYD---SIPVCGFAYIHWTVANVPTDVTVISEDFARQDQ 87
S P D+P AK+LA + D D ++ G +IHW V N+ +T + E
Sbjct: 26 SPPLIFKDVPAEAKSLALIVEDPDVPKNLREDGL-WIHWVVYNLSPAITELVE------- 77
Query: 88 KHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELL 147
G + + L T Y+G P PPD+ H Y YALD L + ++LL
Sbjct: 78 ----GASIFAVQGLNTSGKGCYEG---PCPPDRQHRYFFYCYALDTILPSEENVTRDQLL 130
Query: 148 HAIEGHVIAQAQM 160
+EGH I A++
Sbjct: 131 EVMEGHTIDNAEL 143
>gi|21229660|ref|NP_635577.1| hypothetical protein XCC0182 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|21111141|gb|AAM39501.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 203
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 25/167 (14%)
Query: 13 PDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV--CGFAYIHWTVAN 70
P + E +G+A+ ++ +PE D IPV ++HW +A+
Sbjct: 32 PHLAWSEVPEGTRGFALLCLDPDVPSVPETVGR------DDVQIPVDQPRTDFVHWAMAD 85
Query: 71 VPTDVTVI-----SEDFARQDQKH-------LKGKNSLVSKFL-TTDYSDMYDGYLGPYP 117
+P V I S+ F + ++ +G NS F D + Y GY GPYP
Sbjct: 86 IPASVREIAAGSCSDGFVAKGKQQPAGPAGARQGLNSYTQWFAGNPDMAGNYLGYDGPYP 145
Query: 118 PDKD---HHYTLTVYALD-DDLSLDAGFYLNELLHAIEGHVIAQAQM 160
P D H Y V+ALD L L F ++L A++GHV+A+A +
Sbjct: 146 PFNDLRMHRYFFRVFALDVAQLELPTLFTAADVLSAMQGHVLAEAAL 192
>gi|16128528|ref|NP_415077.1| DLP12 prophage; predicted kinase inhibitor [Escherichia coli K12]
gi|89107410|ref|AP_001190.1| predicted kinase inhibitor [Escherichia coli W3110]
gi|2495550|sp|P77368|YBCL_ECOLI UPF0098 protein ybcL precursor
gi|1778459|gb|AAB40742.1| YbhB homolog [Escherichia coli]
gi|1786757|gb|AAC73646.1| DLP12 prophage; predicted kinase inhibitor [Escherichia coli K12]
gi|85674680|dbj|BAE76320.1| predicted kinase inhibitor [Escherichia coli W3110]
Length = 183
Score = 53.9 bits (128), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 20/100 (20%)
Query: 39 IPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL-----KGK 93
+PE K+ A T+ D D+ P G + HWTV N+P VT + D R+D L +G+
Sbjct: 60 VPEGTKSFAVTVYDPDA-PT-GSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGR 117
Query: 94 NSLVSKFLTTDYSDMYDGYLGPYPP--DKDHHYTLTVYAL 131
N D+ Y G+ G PP DK HHY V+AL
Sbjct: 118 N---------DFG--YAGFGGACPPKGDKPHHYQFKVWAL 146
>gi|66766536|ref|YP_241298.1| hypothetical protein XC_0191 [Xanthomonas campestris pv. campestris
str. 8004]
gi|66571868|gb|AAY47278.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 203
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 25/167 (14%)
Query: 13 PDAYAKKASETNKGYAVKSFPFEIVDIPENAKTLAWTLVDYDSIPV--CGFAYIHWTVAN 70
P + E +G+A+ ++ +PE D IPV ++HW +A+
Sbjct: 32 PHLAWSEVPEGTRGFALLCLDPDVPSVPETVGR------DDVQIPVDQPRTDFVHWAMAD 85
Query: 71 VPTDVTVI-----SEDFARQDQKH-------LKGKNSLVSKFL-TTDYSDMYDGYLGPYP 117
+P V I S+ F + ++ +G NS F D + Y GY GPYP
Sbjct: 86 IPASVREIAAGSCSDGFVAKGKQQPAGPAGARQGLNSYTQWFAGNPDMAGNYLGYDGPYP 145
Query: 118 PDKD---HHYTLTVYALD-DDLSLDAGFYLNELLHAIEGHVIAQAQM 160
P D H Y V+ALD L L F ++L A++GHV+A+A +
Sbjct: 146 PFNDLRMHRYFFRVFALDVAQLELPTLFTAADVLAAMQGHVLAEAAL 192
>gi|114320769|ref|YP_742452.1| YbhB and YbcL [Alkalilimnicola ehrlichei MLHE-1]
gi|114227163|gb|ABI56962.1| YbhB and YbcL [Alkalilimnicola ehrlichei MLHE-1]
Length = 159
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 38 DIPENAKTLAWTLVDYDS---IPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKN 94
++P+ + A D D+ P + ++HW + N+P DV + A ++ GKN
Sbjct: 40 NVPDGTRAFAVICHDPDAPLVSPNGTYGFVHWVLYNIPNDVV----ELAEGTDQYTPGKN 95
Query: 95 SLVSKFLTTDYSDMYDGYLGPYPPDKD--HHYTLTVYALDDDLSLDAGFYLNELLHAIEG 152
D+ ++ GY GP PP+ H Y V AL+DD L +G L +LL IE
Sbjct: 96 ---------DFGNV--GYGGPMPPEGHGLHRYYFWVLALNDDEQLPSGLSLWQLLERIEP 144
Query: 153 HVIAQAQM 160
+I ++
Sbjct: 145 KIIGMNRL 152
>gi|15826205|pdb|1FUX|A Chain A, Crystal Structure Of E.Coli Ybcl, A New Member Of The
Mammalian Pebp Family
gi|15826206|pdb|1FUX|B Chain B, Crystal Structure Of E.Coli Ybcl, A New Member Of The
Mammalian Pebp Family
Length = 166
Score = 53.5 bits (127), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 20/100 (20%)
Query: 39 IPENAKTLAWTLVDYDSIPVCGFAYIHWTVANVPTDVTVISEDFARQDQKHL-----KGK 93
+PE K+ A T+ D D+ P G + HWTV N+P VT + D R+D L +G+
Sbjct: 41 VPEGTKSFAVTVYDPDA-PT-GSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGR 98
Query: 94 NSLVSKFLTTDYSDMYDGYLGPYPP--DKDHHYTLTVYAL 131
N D+ Y G+ G PP DK HHY V+AL
Sbjct: 99 N---------DFG--YAGFGGACPPKGDKPHHYQFKVWAL 127
>gi|120553084|ref|YP_957435.1| PEBP family protein [Marinobacter aquaeolei VT8]
gi|120322933|gb|ABM17248.1| PEBP family protein [Marinobacter aquaeolei VT8]
Length = 208
Score = 53.1 bits (126), Expect = 6e-06, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 30/178 (16%)
Query: 4 HVPFKNHIIPDAYAKKASETNKGYAVKSF----PFEIVDIPENAKTLAWTLVDYDSIPVC 59
H+ F + P+ A E K + V F P D+ + KT+ L D
Sbjct: 28 HMSFGPNRNPELVWDGAPEGTKSFVVMMFDPDVPSVADDVNQEGKTVPADLPRVD----- 82
Query: 60 GFAYIHWTVANVPTDVTVISEDFARQDQKHLKGKN-----------SLVSKFLT--TDYS 106
+ HW + ++P I E D KGK+ + ++FL D +
Sbjct: 83 ---FFHWLLVDIPAGTKRIPEG-EDSDGVSPKGKDYGPGPIGVRGVNNYTQFLAGNPDMA 138
Query: 107 DMYDGYLGPYPPDKD---HHYTLTVYALD-DDLSLDAGFYLNELLHAIEGHVIAQAQM 160
Y GY GP PP D HHY V+ALD D L L+ F N++ A+ GHV+A A++
Sbjct: 139 GTYAGYDGPCPPWNDEIIHHYHFEVHALDVDTLGLEGEFDGNDVRQAMAGHVLASARV 196
>gi|15240946|ref|NP_195750.1| phosphatidylethanolamine-binding family protein [Arabidopsis
thaliana]
gi|7320708|emb|CAB81913.1| putative protein [Arabidopsis thaliana]
gi|17529168|gb|AAL38810.1| unknown protein [Arabidopsis thaliana]
gi|20465385|gb|AAM20117.1| unknown protein [Arabidopsis thaliana]
Length = 162
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 13/141 (9%)
Query: 23 TNKGYAVK---SFPFEIVDIPENAKTLAWTLVDYDSIPVCG--FAYIHWTVANVPTDVTV 77
T G VK S P E ++PE KTLA + D D+ G + W V ++P ++
Sbjct: 24 TMAGQGVKKDISPPLEWYNVPEGTKTLALVVEDIDAPDPSGPLVPWTVWVVVDIPPEMKG 83
Query: 78 ISEDFARQDQKHLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSL 137
+ E ++ G + + G+ GP P H + ++ALDD +
Sbjct: 84 LPEGYS--------GNEDQTTGIREGNNDHKIPGWRGPLLPSHGHRFQFKLFALDDKPKI 135
Query: 138 DAGFYLNELLHAIEGHVIAQA 158
LL AIEGHV+ +A
Sbjct: 136 GHTVTKERLLIAIEGHVLGEA 156
>gi|73540184|ref|YP_294704.1| YbhB and YbcL [Ralstonia eutropha JMP134]
gi|72117597|gb|AAZ59860.1| YbhB and YbcL [Ralstonia eutropha JMP134]
Length = 215
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 104 DYSDMYDGYLGPYPPDKD---HHYTLTVYALD-DDLSLDAGFYLNELLHAIEGHVIAQAQ 159
D Y GY GP PP D HHY TVYALD D + LD F ++L AI GHV+AQA
Sbjct: 143 DMKGDYYGYDGPCPPWNDTLLHHYVFTVYALDIDRVPLDGKFTGAQVLEAIRGHVLAQAS 202
Query: 160 M 160
+
Sbjct: 203 L 203
>gi|126726793|ref|ZP_01742633.1| toluene-induced BbsI protein-like protein [Rhodobacterales
bacterium HTCC2150]
gi|126704122|gb|EBA03215.1| toluene-induced BbsI protein-like protein [Rhodobacterales
bacterium HTCC2150]
Length = 210
Score = 52.8 bits (125), Expect = 8e-06, Method: Composition-based stats.
Identities = 55/175 (31%), Positives = 73/175 (41%), Gaps = 28/175 (16%)
Query: 4 HVPFKNHIIPDAYAKKASETNKGYAV----KSFPFEIVDIPENAKTLAWTLVDYDSIPVC 59
H +I P A E K +AV P D+ + K + L D
Sbjct: 28 HFELSGNINPRLAWSDAPEGTKSFAVIVHDPDVPSSGEDVNQEGKIVPSDLPRVD----- 82
Query: 60 GFAYIHWTVANVPTDVTVISE-----------DFARQDQKHLKGKNSLVSKFL-TTDYSD 107
+ HW + N+P D++ I+E A Q G NS F TD
Sbjct: 83 ---FYHWVLVNIPADLSEIAEGADSSGVTPTGKTAGQRPHGRTGINSYTDWFAGDTDMGG 139
Query: 108 MYDGYLGPYPPDKD---HHYTLTVYALD-DDLSLDAGFYLNELLHAIEGHVIAQA 158
Y GY GP PP D HHY TVYALD + L+LD F + L A++GH++ QA
Sbjct: 140 DYGGYDGPCPPWNDSIMHHYHFTVYALDFETLNLDGAFTGAQALAAMDGHILGQA 194
>gi|56479078|ref|YP_160667.1| hypothetical protein ebA6371 [Azoarcus sp. EbN1]
gi|56315121|emb|CAI09766.1| conserved hypothetical protein [Azoarcus sp. EbN1]
Length = 157
Score = 52.4 bits (124), Expect = 9e-06, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 31 SFPFEIVDIPENAKTLAWTLVDYDSIPVCGF--AYIHWTVANVPTDVTVISEDFARQDQK 88
S P IPEN ++LA + D D+ ++HW + N+P + E A D
Sbjct: 28 SPPLGWSGIPENTRSLALIVDDPDAPDPAAPQRTWVHWVLYNIPPTTAALPEAVAMADL- 86
Query: 89 HLKGKNSLVSKFLTTDYSDMYDGYLGPYPPDKDHHYTLTVYALDDDLSLDAGFYLNELLH 148
L ++ T D+ GY GP PP H Y +YALD L+ EL H
Sbjct: 87 ------PLGTREGTNDWKRT--GYGGPCPPIGRHRYFHKLYALDVVLAPLGAPTKAELEH 138
Query: 149 AIEGHVIAQAQM 160
A++GH++A+A++
Sbjct: 139 AMQGHILAEAEL 150
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.319 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 669,051,102
Number of Sequences: 5470121
Number of extensions: 27816230
Number of successful extensions: 52691
Number of sequences better than 1.0e-05: 110
Number of HSP's better than 0.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 52516
Number of HSP's gapped (non-prelim): 110
length of query: 166
length of database: 1,894,087,724
effective HSP length: 122
effective length of query: 44
effective length of database: 1,226,732,962
effective search space: 53976250328
effective search space used: 53976250328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 124 (52.4 bits)