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Genomic biology
Bos taurus
Canis familiaris
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Homo sapiens
Mus musculus
Rattus novegicus
Sus scrofa

UniSTS:271882 Links
PMC201071P3
Bos taurus chromosome 8, locus TLR4
Bubalus bubalis chromosome 3
Homo sapiens chromosome 9, locus TLR4
Macaca mulatta chromosome 15, locus LOC702270
Ovis aries locus TLR4
Pan troglodytes chromosome 9, locus TLR4

Found by e-PCR in sequences from Bos taurus, Homo sapiens, Ovis aries and Pan troglodytes.

Primer InformationHelp

Forward primer:CTGCCAGGTCTGAGCAATCTC
Reverse primer:ATTGTTGTGGTGTCCCAGCACTTCATCC
PCR product size:75 (bp), Homo sapiens
 75 (bp), Mus musculus

   Bos taurus
Name: PMC201071P3
Polymorphism info:  

Cross References Help
Gene GeneID:281536
 Symbol:TLR4
 Description:toll-like receptor 4
 Position: 
UniGeneBt.9030 Toll-like receptor 4

Mapping InformationHelp
PMC201071P3 Sequence Map: Chr 8 Map Viewer
  Position: 112436762-112436836 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
NM_174198.6 2673 .. 2747 (75 bp)  
 
mRNA (5)
AF310952.2 2203 .. 2277 (75 bp)  
AB056444.1 2203 .. 2277 (75 bp)  
AY297040.1 2203 .. 2277 (75 bp)  
AY634630.1 2203 .. 2277 (75 bp)  
DQ839566.1 2673 .. 2747 (75 bp)  
 
Genomic (4)
AH013178.1 3274 .. 3348 (75 bp)  
AY297043.1 2225 .. 2299 (75 bp)  
DQ839567.1 9970 .. 10044 (75 bp)  
CM000184.3 112436762 .. 112436836 (75 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (1)
AC161777.3 152379 .. 152453 (75 bp)  
 
ESTs (4)
BF889715.1 5 .. 79 (75 bp)  
DY117787.1 137 .. 211 (75 bp)  
EE980339.1 149 .. 223 (75 bp)  
FE009404.1 203 .. 277 (75 bp)  
 
Whole Genome Shotgun sequences (1)
AAFC03001076.1 122796 .. 122870 (75 bp)  
 

   Bubalus bubalis
Name: PMC201071P3
Also known as: Probe:9691795
Polymorphism info:  
Mapping InformationHelp
PMC201071P3 BBURH5000 Map: Chr 3|BBU3a Map Viewer
  Position: 760.7 (cR5000)

   Homo sapiens
Name: PMC201071P3
Polymorphism info:  

Cross References Help
Gene GeneID:7099
 Symbol:TLR4
 Description:toll-like receptor 4
 Position:9q32-q33
UniGeneHs.174312 Toll-like receptor 4

Mapping InformationHelp
PMC201071P3 Sequence Map: Chr 9 Map Viewer
  Position: 119516427-119516501 (bp)
 
PMC201071P3 Sequence Map: Chr 9|HuRef Map Viewer
  Position: 90094687-90094761 (bp)
 
PMC201071P3 Sequence Map: Chr 9|Celera Map Viewer
  Position: 91124373-91124447 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
NM_138554.2 2341 .. 2415 (75 bp)  
 
mRNA (5 of 7)[Show All Hits]
U93091.1 2303 .. 2377 (75 bp)  
U88880.1 2364 .. 2438 (75 bp)  
BC025294.1 2117 .. 2191 (75 bp)  
BC117422.1 2220 .. 2294 (75 bp)  
AK226155.1 2373 .. 2447 (75 bp)  
 
Genomic (5 of 12)[Show All Hits]
AF177765.1 14178 .. 14252 (75 bp)  
AF177766.1 1999 .. 2073 (75 bp)  
AH009665.1 6323 .. 6397 (75 bp)  
AF172171.1 3630 .. 3704 (75 bp)  
AL160272.16 22911 .. 22985 (75 bp)  
 
ESTs (5 of 6)[Show All Hits]
H48602.1 193 .. 267 (75 bp)  
BQ233558.1 137 .. 211 (75 bp)  
CA389375.1 546 .. 620 (75 bp)  
DA482073.1 180 .. 254 (75 bp)  
DA643247.1 184 .. 258 (75 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01102726.1 54771 .. 54845 (75 bp)  
AADC01086007.1 41940 .. 42014 (75 bp)  
AADB02012705.1 644927 .. 645001 (75 bp)  
ABBA01016273.1 31350 .. 31424 (75 bp)  
ABKV01151283.1 20 .. 94 (75 bp)  
 

   Macaca mulatta
Name: PMC201071P3
Polymorphism info:  

Cross References Help
Gene GeneID:702270
 Symbol:LOC702270
 Description:similar to toll-like receptor 4 precursor
 Position: 
UniGeneMmu.3527 Similar to toll-like receptor 4 precursor
 Mmu.3814 Toll-like receptor 4

Mapping InformationHelp
PMC201071P3 Sequence Map: Chr 15 Map Viewer
  Position: 18364719-18364793 (bp)

   Mus musculus
 
Polymorphism info:  

   Oryctolagus cuniculus
 
Polymorphism info:  

Cross References Help
UniGeneOcu.3357 Toll-like receptor 4


   Ovis aries
 
Polymorphism info:  

Cross References Help
Gene GeneID:554263
 Symbol:TLR4
 Description:toll-like receptor 4
 Position: 
UniGeneOar.12982 Toll-like receptor 4


Electronic PCR results Help
mRNA (1)
DQ922636.1 1946 .. 2020 (75 bp)  
 

   Pan troglodytes
Name: PMC201071P3
Polymorphism info:  

Cross References Help
Gene GeneID:743242
 Symbol:TLR4
 Description:toll-like receptor 4
 Position: 

Mapping InformationHelp
PMC201071P3 Sequence Map: Chr 9 Map Viewer
  Position: 117249218-117249292 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XM_001146983.1 2677 .. 2751 (75 bp)  
 
Genomic (1)
CM000323.1 117249218 .. 117249292 (75 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01316709.1 12360 .. 12434 (75 bp)  
AACZ02106840.1 31569 .. 31643 (75 bp)  
 

 

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