Vibrio vulnificus CMCP6 chromosome I

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189733-189832 (1-100) 189833-189932 (101-200) 189933-190032 (201-300) 190033-190132 (301-400) 190133-190232 (401-500)
190233-190332 (501-600) [190333-190432 (601-700)] 190433-190532 (701-800) 190533-190632 (801-900) 190633-190732 (901-1000)
190733-190832 (1001-1100) 190833-190932 (1101-1200) 190933-191032 (1201-1300) 191033-191132 (1301-1400) 191133-191232 (1401-1500)
191233-191332 (1501-1600) 191333-191432 (1601-1700) 191433-191532 (1701-1800) 191533-191632 (1801-1900) 191633-191732 (1901-2000)
191733-191832 (2001-2100) 191833-191932 (2101-2200) 191933-192032 (2201-2300) 192033-192132 (2301-2400) 192133-192232 (2401-2500)
192233-192332 (2501-2600) 192333-192432 (2601-2700) 192433-192532 (2701-2800) 192533-192632 (2801-2900) 192633-192658 (2901-2926)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190333 hypothetical VV10639 mannitol-1-phosphate 5-dehydrogenase
COG0246
genbank 27364097 NP_759625.1 382 657054 658202
190334 hypothetical VV10640 Mannitol operon repressor
COG3722
genbank 27364098 NP_759626.1 176 658259 658789
190335 hypothetical VV10641 D-fructose-6-phosphate amidotransferase
Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
genbank 27364099 NP_759627.1 610 658892 660724
190336 hypothetical VV10642 Transcriptional regulator of sugar metabolism
DeoR family; COG1349
genbank 27364100 NP_759628.1 253 660793 661554
190337 hypothetical VV10644 pyruvate kinase
catalyzes the formation of phosphoenolpyruvate from pyruvate
genbank 27364101 NP_759629.1 470 661985 663397
190338 hypothetical VV10645 Putative transcriptional regulator LuxZ
COG1802
genbank 27364102 NP_759630.1 208 663601 664227
190339 hypothetical VV10646 Sensory box/GGDEF family protein
COG2199
genbank 27364103 NP_759631.1 626 664708 666588
190340 hypothetical VV10647 acetolactate synthase III small subunit
with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity
genbank 27364104 NP_759632.1 156 666741 667211
190341 hypothetical VV10648 acetolactate synthase III large subunit
with IlvH catalyzes the formation of 2-acetolactate from pyruvate
genbank 27364105 NP_759633.1 574 667237 668961
190342 hypothetical VV10649 Long-chain acyl-CoA synthetase
AMP-forming; COG1022
genbank 27364106 NP_759634.1 601 669421 671226
190343 hypothetical VV10650 Transcriptional regulator. LysR family
COG0583
genbank 27364107 NP_759635.1 319 671414 672373
190344 hypothetical VV10651 Glycosyl transferase
similar to to UDP-glucuronosyltransferase; COG1819
genbank 27364108 NP_759636.1 348 672726 673772
190345 hypothetical VV10652 Membrane-associated phospholipid phosphatase
COG0671
genbank 27364109 NP_759637.1 185 673777 674334
190346 hypothetical VV10653 hypothetical protein genbank 27364110 NP_759638.1 255 674551 675318
190347 hypothetical VV10654 2-isopropylmalate synthase
catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
genbank 27364111 NP_759639.1 515 675919 677466
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190348 hypothetical VV10655 3-isopropylmalate dehydrogenase
catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
genbank 27364112 NP_759640.1 363 677553 678644
190349 hypothetical VV10656 isopropylmalate isomerase large subunit
catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
genbank 27364113 NP_759641.1 466 678664 680064
190350 leuD hypothetical VV10657 isopropylmalate isomerase small subunit
catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
genbank 27364114 NP_759642.1 200 680076 680678
190351 hypothetical VV10658 hypothetical protein genbank 27364115 NP_759643.1 260 680812 681594
190352 djlA hypothetical VV10659 Dna-J like membrane chaperone protein
functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid m
genbank 27364116 NP_759644.1 287 681679 682542
190353 hypothetical VV10660 organic solvent tolerance protein precursor
determines N-hexane tolerance and is involved in outer membrane permeabilit
genbank 27364117 NP_759645.1 776 682690 685020
190354 hypothetical VV10661 Parvulin-like peptidyl-prolyl isomerase
COG0760
genbank 27364118 NP_759646.1 442 685029 686357
190355 hypothetical VV10662 4-hydroxythreonine-4-phosphate dehydrogenase
Catalyzes the NAD-dependent oxidation of 4-(phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which spontaneously decarboxylate to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
genbank 27364119 NP_759647.1 328 686350 687336
190356 ksgA hypothetical VV10663 dimethyladenosine transferase
Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'end of 16S rRNA in the 30S particle. Its inactivation leads to kasugamycin resistance
genbank 27364120 NP_759648.1 268 687333 688139
190357 hypothetical VV10664 hypothetical protein
similar to Vibrio cholerae ApaG protein; COG2967
genbank 27364121 NP_759649.1 126 688199 688579
190358 hypothetical VV10665 diadenosinetetraphosphatase
hydrolyzes P(1), P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP
genbank 27364122 NP_759650.1 269 688594 689403
190359 hypothetical VV10666 Dihydrofolate reductase
COG0262
genbank 27364123 NP_759651.1 162 689448 689936
190360 hypothetical VV10667 hypothetical protein
COG3610
genbank 27364124 NP_759652.1 154 689946 690410
190361 hypothetical VV10668 hypothetical protein
COG2966
genbank 27364125 NP_759653.1 238 690410 691126
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190362 hypothetical VV10669 GTP1/Obg family protein
COG0536
genbank 27364126 NP_759654.1 389 691338 692507
190363 hypothetical VV10670 50S ribosomal protein L27
The function of this ribosomal subunit is unknown
genbank 27364127 NP_759655.1 85 692663 692920
190364 hypothetical VV10671 50S ribosomal protein L21
COG0261
genbank 27364128 NP_759656.1 103 692941 693252
190365 hypothetical VV10672 Geranylgeranyl pyrophosphate synthase
COG0142
genbank 27364129 NP_759657.1 282 693648 694496
190366 hypothetical VV10673 malate dehydrogenase
oxdizes malate to oxaloacetate
genbank 27364130 NP_759658.1 310 694619 695551
190367 hypothetical VV10674 arginine repressor
regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes
genbank 27364131 NP_759659.1 156 695924 696394
190368 hypothetical VV10675 TRAP-type uncharacterized transport system, periplasmic component
COG2358
genbank 27364132 NP_759660.1 322 696760 697728
190369 hypothetical VV10676 TRAP-type uncharacterized transport system, fused permease component
COG4666
genbank 27364133 NP_759661.1 859 697924 700503
190370 hypothetical VV10677 Universal stress protein UspA
similar to nucleotide-binding proteins; COG0589
genbank 27364134 NP_759662.1 145 700582 701019
190371 hypothetical VV10678 1-acyl-sn-glycerol-3-phosphate acyltransferase
COG0204
genbank 27364135 NP_759663.1 241 701105 701830
190372 hypothetical VV10679 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation
genbank 27364136 NP_759664.1 421 701970 703235
190373 hypothetical VV10680 BolA/YrbA family protein
COG5007
genbank 27364137 NP_759665.1 84 703245 703499
190374 hypothetical VV10681 Putative anti-sigma B factor antagonist
COG3113
genbank 27364138 NP_759666.1 105 703503 703820
190375 hypothetical VV10682 ABC-type transport system involved in resistance to organic solvents, auxiliary component
COG2854
genbank 27364139 NP_759667.1 199 703820 704419
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190376 hypothetical VV10683 ABC-type transport system involved in resistance to organic solvents, periplasmic component
COG1463
genbank 27364140 NP_759668.1 162 704460 704948
190377 hypothetical VV10684 ABC-type transport system involved in resistance to organic solvents, permease component
COG0767
genbank 27364141 NP_759669.1 262 704951 705739
190378 hypothetical VV10685 ABC-type transport system involved in resistance to organic solvents, ATPase component
COG1127
genbank 27364142 NP_759670.1 267 705732 706535
190379 hypothetical VV10686 Ca2+/Na+ antiporter
COG0530
genbank 27364143 NP_759671.1 321 706882 707847
190380 hypothetical VV10687 Predicted sugar phosphate isomerase involved in capsule formation
CBS domain protein; COG0517; COG0794
genbank 27364144 NP_759672.1 323 707869 708840
190381 hypothetical VV10688 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis
genbank 27364145 NP_759673.1 185 708840 709397
190382 hypothetical VV10689 hypothetical protein
COG3117
genbank 27364146 NP_759674.1 187 709394 709957
190383 hypothetical VV10690 hypothetical protein
COG1934
genbank 27364147 NP_759675.1 153 709971 710432
190384 hypothetical VV10691 ABC-type transport system, ATPase component
COG1137
genbank 27364148 NP_759676.1 241 710432 711157
190385 hypothetical VV10692 DNA-directed RNA polymerase subunit N
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
genbank 27364149 NP_759677.1 487 711211 712674
190386 hypothetical VV10693 Ribosome-associated protein Y
PSrp-1; COG1544
genbank 27364150 NP_759678.1 95 712698 712985
190387 hypothetical VV10694 Phosphotransferase system mannitol/fructose-specific IIA domain
Ntr-type; COG1762
genbank 27364151 NP_759679.1 148 712988 713434
190388 hypothetical VV10695 hypothetical protein
COG1660
genbank 27364152 NP_759680.1 287 713447 714310
190389 hypothetical VV10697 Phosphocarrier protein NPr
COG1925
genbank 27364153 NP_759681.1 91 714313 714588
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190390 hypothetical VV10698 Mg/Co/Ni transporter MgtE
contains CBS domain; COG2239
genbank 27364154 NP_759682.1 451 714803 716158
190391 hypothetical VV10699 PmbA-like protein
similar to Vibrio cholerae PmbA-like protein; COG0312
genbank 27364155 NP_759683.1 447 716260 717603
190392 hypothetical VV10700 hypothetical protein
COG3028
genbank 27364156 NP_759684.1 185 717721 718278
190393 hypothetical VV10701 ABC-type thiamine transport system, ATPase component
COG3840
genbank 27364157 NP_759685.1 234 718372 719076
190394 thiP hypothetical VV10702 thiamin ABC transporter membrane component
functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine
genbank 27364158 NP_759686.1 529 719070 720659
190395 hypothetical VV10703 ABC-type thiamine transport system, periplasmic component
COG4143
genbank 27364159 NP_759687.1 320 720687 721649
190396 hypothetical VV10705 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate
genbank 27364160 NP_759688.1 214 721916 722560
190397 hypothetical VV10706 UDP-N-acetylmuramate-alanine ligase
COG0773
genbank 27364161 NP_759689.1 484 722577 724031
190398 hypothetical VV10707 fructose-1,6-bisphosphatase
catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
genbank 27364162 NP_759690.1 338 724280 725296
190399 hypothetical VV10708 inorganic pyrophosphatase
catalyzes the hydrolysis of pyrophosphate to phosphate
genbank 27364163 NP_759691.1 176 725436 725966
190400 hypothetical VV10709 hypothetical protein genbank 27364164 NP_759692.1 119 726056 726415
190401 hypothetical VV10710 hypothetical protein
COG2105
genbank 27364165 NP_759693.1 124 726516 726890
190402 hypothetical VV10711 hypothetical protein
COG2911
genbank 27364166 NP_759694.1 1251 726927 730682
190403 hypothetical VV10712 Outer membrane protein
COG0729
genbank 27364167 NP_759695.1 571 730679 732394
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190404 hypothetical VV10713 methionine sulfoxide reductase A
this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress
genbank 27364168 NP_759696.1 209 732626 733255
190405 hypothetical VV10714 hypothetical protein genbank 27364169 NP_759697.1 69 733360 733569
190406 hypothetical VV10715 Predicted transcriptional regulator
COG3054
genbank 27364170 NP_759698.1 183 733902 734453
190407 hypothetical VV10716 hypothetical protein genbank 27364171 NP_759699.1 66 734555 734755
190408 hypothetical VV10717 hypothetical protein genbank 27364172 NP_759700.1 217 734930 735583
190409 hypothetical VV10719 ABC-type antimicrobial peptide transport system, ATPase component
COG1136
genbank 27364173 NP_759701.1 234 735650 736354
190410 hypothetical VV10720 ABC-type antimicrobial peptide transport system, permease component
COG0577
genbank 27364174 NP_759702.1 419 736351 737610
190411 hypothetical VV10721 hypothetical protein
COG3495
genbank 27364175 NP_759703.1 165 737615 738112
190412 hypothetical VV10722 hypothetical protein genbank 27364176 NP_759704.1 300 738461 739363
190413 hypothetical VV10723 adenylylsulfate kinase
converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis
genbank 27364177 NP_759705.1 207 739490 740113
190414 hypothetical VV10724 Sodium/sulfate symporter
COG0471
genbank 27364178 NP_759706.1 574 740127 741851
190415 cysN hypothetical VV10725 sulfate adenylyltransferase subunit 1
may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; pa
genbank 27364179 NP_759707.1 476 741939 743369
190416 hypothetical VV10726 sulfate adenylyltransferase subunit 2
with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
genbank 27364180 NP_759708.1 302 743387 744295
190417 hypothetical VV10727 uroporphyrin-III C-methyltransferase
catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1
genbank 27364181 NP_759709.1 291 744353 745228
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190418 cpdB hypothetical VV10728 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein
periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate
genbank 27364182 NP_759710.1 653 745501 747462
190419 hypothetical VV10729 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase
COG0664
genbank 27364183 NP_759711.1 187 747534 748097
190420 hypothetical VV10730 ElaA-like protein
similar to Vibrio cholerae ElaA-like protein; COG2153
genbank 27364184 NP_759712.1 150 748197 748649
190421 hypothetical VV10731 hypothetical protein
COG0697
genbank 27364185 NP_759713.1 290 748650 749522
190422 hypothetical VV10732 hypothetical protein
COG3061
genbank 27364186 NP_759714.1 187 749596 750159
190423 hypothetical VV10733 FKBP-type peptidyl-prolyl cis-trans isomerase 1
COG0545
genbank 27364187 NP_759715.1 186 750447 751007
190424 hypothetical VV10734 hypothetical protein genbank 27364188 NP_759716.1 84 751141 751395
190425 hypothetical VV10735 50S ribosomal protein L17
is a component of the macrolide binding site in the peptidyl transferase center
genbank 27364189 NP_759717.1 127 751905 752288
190426 hypothetical VV10736 DNA-directed RNA polymerase alpha subunit
Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
genbank 27364190 NP_759718.1 330 752315 753307
190427 hypothetical VV10737 30S ribosomal protein S4
Binds directly to 16S rRNA where it nucleates assembly of the 30S subunit
genbank 27364191 NP_759719.1 206 753331 753951
190428 hypothetical VV10738 30S ribosomal protein S11
located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome
genbank 27364192 NP_759720.1 129 753979 754368
190429 hypothetical VV10739 30S ribosomal protein S13
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA
genbank 27364193 NP_759721.1 118 754387 754743
190430 hypothetical VV10740 preprotein translocase SecY
with SecE and SecG forms a protein-conduction channel in the inner membrane
genbank 27364194 NP_759722.1 444 755042 756376
190431 hypothetical VV10741 50S ribosomal protein L15
associates with 23S ribosomal RNA and is involved in 50S ribosome assembly
genbank 27364195 NP_759723.1 144 756397 756831
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
190432 hypothetical VV10742 50S ribosomal protein L30
Non-essential, may be involved in procession of translation
genbank 27364196 NP_759724.1 58 756838 757014


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