Homo sapiens HELA CELLS COT 25-NORMALIZED

Library Description

1st strand cDNA was primed with a NotI-oligo(dT) primer. Five prime end enriched, double-strand cDNA was digested with Not I and cloned into the Not I and EcoR V sites of the pCMVSPORT 6 vector. Library was normalized.

Source: Genoscope, Genoscope - Centre National de Sequencage

Gene Content Analysis

9,176 ESTs from this library were grouped into 2,791 UniGene entries (putative genes) [UniGene build #218, 05-Jan-2009]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs	TPM		UniGene Entry
1	109		Hs.377705	Zinc finger protein 692.
1	109		Hs.374067	Ubiquitin protein ligase E3B.
1	109		Hs.371914	Bleomycin hydrolase.
1	109		Hs.358997	Tubulin tyrosine ligase.
1	109		Hs.356366	Transcribed locus, strongly similar to NP_114026.3 ribosomal protein S2 [Rattus norvegicus].
1	109		Hs.355643	RNA binding protein S1, serine-rich domain.
1	109		Hs.351582	Chromosome 19 open reading frame 51.
1	109		Hs.350265	Lon peptidase 1, mitochondrial.
1	109		Hs.348292	Hypothetical protein LOC729678.
1	109		Hs.34045	Cell division cycle associated 4.
1	109		Hs.339735	Cullin 4A.
1	109		Hs.33922	Chromosome 1 open reading frame 156.
1	109		Hs.335061	COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis).
1	109		Hs.334562	Cell division cycle 2, G1 to S and G2 to M.
1	109		Hs.334534	Glucosamine (N-acetyl)-6-sulfatase.
1	109		Hs.32995	Sin3A-associated protein, 130kDa.
1	109		Hs.327527	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.
1	109		Hs.315167	Defective in sister chromatid cohesion 1 homolog (S. cerevisiae).
1	109		Hs.31130	Transmembrane 7 superfamily member 2.
1	109		Hs.306083	Chromosome 22 open reading frame 32.
1	109		Hs.302903	Ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast).
1	109		Hs.301540	Sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase).
1	109		Hs.301394	Dysbindin (dystrobrevin binding protein 1) domain containing 1.
1	109		Hs.300224	Chromosome 8 open reading frame 30A.
1	109		Hs.29276	Chromosome 9 open reading frame 6.
1	109		Hs.287582	Transcribed locus, weakly similar to XP_001790514.1 PREDICTED: similar to endonuclease reverse transcriptase [Bos taurus].
1	109		Hs.286194	Solute carrier family 24 (sodium/potassium/calcium exchanger), member 6.
1	109		Hs.282410	Calmodulin 1 (phosphorylase kinase, delta).
1	109		Hs.282326	Regulator of calcineurin 1.
1	109		Hs.278078	Similar to LOC100126053 protein.
1	109		Hs.276429	Tripartite motif family-like 2.
1	109		Hs.274873	Cysteinyl-tRNA synthetase.
1	109		Hs.274136	G protein-coupled receptor 124.
1	109		Hs.262858	Partner of NOB1 homolog (S. cerevisiae).
1	109		Hs.26136	Phosphatidylinositol glycan anchor biosynthesis, class Y.
1	109		Hs.260603	Phosphatidylinositol-5-phosphate 4-kinase, type II, beta.
1	109		Hs.25723	Family with sequence similarity 89, member B.
1	109		Hs.255935	B-cell translocation gene 1, anti-proliferative.
1	109		Hs.254632	Transcribed locus.
1	109		Hs.254113	Polymerase (RNA) mitochondrial (DNA directed).
1	109		Hs.244378	Solute carrier family 2 (facilitated glucose transporter), member 6.
1	109		Hs.240170	Oligonucleotide/oligosaccharide-binding fold containing 2B.
1	109		Hs.239631	Component of oligomeric golgi complex 5.
1	109		Hs.23918	Arginine vasopressin-induced 1.
1	109		Hs.236361	RNA binding motif protein 38.
1	109		Hs.233552	Cell division cycle 2-like 5 (cholinesterase-related cell division controller).
1	109		Hs.23348	S-phase kinase-associated protein 2 (p45).
1	109		Hs.23198	Chromosome 1 open reading frame 31.
1	109		Hs.208597	C-terminal binding protein 1.
1	109		Hs.202453	V-myc myelocytomatosis viral oncogene homolog (avian).
1	109		Hs.201641	Brain abundant, membrane attached signal protein 1.
1	109		Hs.200227	Transcribed locus.
1	109		Hs.198853	Chromosome 12 open reading frame 32.
1	109		Hs.194816	Stomatin (EPB72)-like 1.
1	109		Hs.193370	LIM domains containing 1.
1	109		Hs.191510	Butyrophilin, subfamily 3, member A1.
1	109		Hs.186350	Ribosomal protein L4.
1	109		Hs.183994	Protein phosphatase 1, catalytic subunit, alpha isoform.
1	109		Hs.183983	PITPNM family member 3.
1	109		Hs.182698	Hypothetical LOC148413.
1	109		Hs.179260	Chromosome 14 open reading frame 4.
1	109		Hs.174134	Coiled-coil domain containing 44.
1	109		Hs.173894	Transcribed locus.
1	109		Hs.169474	Eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa.
1	109		Hs.169333	Tigger transposable element derived 6.
1	109		Hs.162777	Polymerase (DNA directed), epsilon 2 (p59 subunit).
1	109		Hs.162585	Solute carrier family 12 (sodium/potassium/chloride transporters), member 2.
1	109		Hs.15591	COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis).
1	109		Hs.154163	Protein arginine methyltransferase 2.
1	109		Hs.150837	Thioredoxin domain containing 5.
1	109		Hs.147377	ATP/GTP binding protein-like 2.
1	109		Hs.145049	Regulatory solute carrier protein, family 1, member 1.
1	109		Hs.144058	N-acetyltransferase 9 (GCN5-related, putative).
1	109		Hs.143766	Atrophin 1.
1	109		Hs.142076	UDP-N-acteylglucosamine pyrophosphorylase 1-like 1.
1	109		Hs.13999	SIN3 homolog B, transcription regulator (yeast).
1	109		Hs.13370	Unc-50 homolog (C. elegans).
1	109		Hs.133337	RWD domain containing 4A.
1	109		Hs.133122	Zinc finger, DHHC-type containing 12.
1	109		Hs.132499	Actin related protein 2/3 complex, subunit 5-like.
1	109		Hs.128813	Chromosome 17 open reading frame 69.
1	109		Hs.128096	Zinc finger, MYND-type containing 19.
1	109		Hs.128055	Oxidative stress induced growth inhibitor 1.
1	109		Hs.127792	Delta-like 3 (Drosophila).
1	109		Hs.122115	EP400 N-terminal like.
1	109		Hs.119177	ADP-ribosylation factor 3.
1	109		Hs.116651	Myelin protein zero-like 2.
1	109		Hs.113876	Wolf-Hirschhorn syndrome candidate 1.
1	109		Hs.108268	Chromosome 14 open reading frame 68.
1	109		Hs.106212	Heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A).
1	109		Hs.10326	Coatomer protein complex, subunit epsilon.

Source: NCBI UniGene

EST Sequences

9,795 EST sequences from this library have been submitted to the public sequence database as of 05-Jan-2009.

Source: NCBI GenBank

Click the button to save sequences to a file (FASTA format)

Keywords

• cervix
• cervical tumor
• adult
• female
• normalized

Source: NCBI Clone Registry