11 hits
178 letters
sce 
828 YML055w (178)
spo 
132 SPAC1071.04c (167)
ath 
74 At2g39960 (171)
ath 72 At5g36690 (503)
hsa 
68 _ Hs13648017 (273) KOG4651
hsa 68 _ Hs8923758_3 (282) KOG4651
cel 
65 CE27190 (410)
spo 63 SPAC23H4.11c (188)
hsa 63 Hs18557493 (558)
dme 
63 _ 7301549 (357) KOG1313
hsa 61 _ Hs8922081 (2969) KOG1083
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= YML055w
(178 letters)
Database: kyvama
112,920 sequences; 47,500,486 total letters
Score E
Sequences producing significant alignments: (bits) Value
YML055w 323 1e-88
SPAC1071.04c 55 6e-08
At2g39960 33 0.29
At5g36690 32 0.50
Hs13648017 31 1.5
Hs8923758_3 31 1.5
CE27190 30 3.3
SPAC23H4.11c 29 5.6
Hs18557493 29 5.6
7301549 29 5.6
Hs8922081 28 9.5
# >YML055w
# Length = 178
#
# Score = 323 bits (828), Expect = 1e-88
# Identities = 164/178 (92%), Positives = 164/178 (92%)
#
# Query: 1 MSSAKPINVYSIPELNQALDEALPSVFARLNYERSYALLDAKLYIGYSIAVVAGLSFFLD 60
# MSSAKPINVYSIPELNQALDEALPSVFARLNYERSYALLDAKLYIGYSIAVVAGLSFFLD
# Sbjct: 1 MSSAKPINVYSIPELNQALDEALPSVFARLNYERSYALLDAKLYIGYSIAVVAGLSFFLD 60
#
# Query: 61 KKFERDQIVTYQKLLVGAYFVLSLLFWYFSRFIEKGTVYVGKRRGTKEEIYVKTKFEKNE 120
# KKFERDQIVTYQKLLVGAYFVLSLLFWYFSRFIEKGTVYVGKRRGTKEEIYVKTKFEKNE
# Sbjct: 61 KKFERDQIVTYQKLLVGAYFVLSLLFWYFSRFIEKGTVYVGKRRGTKEEIYVKTKFEKNE 120
#
# Query: 121 PLYLVELVQXXXXXXXXXXXXXXLEVNKVFNESGYLQNDAYFKWFSEQHNVLDTKKNE 178
# PLYLVELVQ LEVNKVFNESGYLQNDAYFKWFSEQHNVLDTKKNE
# Sbjct: 121 PLYLVELVQKKKGENSKKELKAKLEVNKVFNESGYLQNDAYFKWFSEQHNVLDTKKNE 178
#
#
# >SPAC1071.04c
# Length = 167
#
# Score = 55.5 bits (132), Expect = 6e-08
# Identities = 33/118 (27%), Positives = 62/118 (51%), Gaps = 9/118 (7%)
#
# Query: 10 YSIPELNQALDEALPSVFARLNYERSYALLDAKLYIGYSIAVVAGLSFFLDKKFERDQIV 69
# Y++ + D+ L + F + Y++S+ D +L I + + AGL+F ++ + +
# Sbjct: 4 YNVSDFKSKFDKELTNHFNKNGYKQSFVFEDIRLLIAIACIIPAGLAFGIEYVYGFGVLK 63
#
# Query: 70 TYQKLLVGAYFVLSLLFWYFSRFIEKGTVYVGKRRGTKEEIYVKTKFE-----KNEPL 122
# +Y K L+ YF+ S L ++S ++ TVYV TK+E ++K + KN+PL
# Sbjct: 64 SYLKYLLPLYFLASCLLTFWSSVVKGSTVYV----ATKKERHIKISADTFLPLKNKPL 117
#
#
# >At2g39960
# Length = 171
#
# Score = 33.1 bits (74), Expect = 0.29
# Identities = 18/65 (27%), Positives = 32/65 (48%)
#
# Query: 3 SAKPINVYSIPELNQALDEALPSVFARLNYERSYALLDAKLYIGYSIAVVAGLSFFLDKK 62
# + K N+ + LDE++ + Y+ L + KL +G I VVA ++ F +KK
# Sbjct: 12 NVKKANLLDHHSIKHILDESVSDIVTSRGYKEDVRLSNLKLILGTIIIVVALVAQFYNKK 71
#
# Query: 63 FERDQ 67
# F ++
# Sbjct: 72 FPENR 76
#
#
# >At5g36690
# Length = 503
#
# Score = 32.3 bits (72), Expect = 0.50
# Identities = 43/178 (24%), Positives = 73/178 (40%), Gaps = 17/178 (9%)
#
# Query: 9 VYSIPELNQALDEALPSVFARLNYERSYALLDAKLYIGYSIAVVAGLSFFLDKKFERDQI 68
# VY PE+ +DEA +F R N R L K + ++ + + + +
# Sbjct: 76 VYDNPEIKAKIDEANQEIF-RCNELRINVLSAKKSELAEVSSLYTQMESLVPQSEGYRMV 134
#
# Query: 69 VTYQK-----LLVGAYFVLSLLFWYFSRFIEKGTVYVGKRRGTKEEIYVKTKFEKNEPLY 123
# + +K LL + S+L W+ +I + + G G +EE ++ + EK + +
# Sbjct: 135 IEEKKKEFDTLLEALRNLRSVLVWWMQSYIAQYQIEYGS-IGLEEEDWMLKETEKPDGII 193
#
# Query: 124 LVELVQXXXXXXXXXXXXXXLEVNKVFNESGYLQ---NDAYFKWFSEQHN--VLDTKK 176
# L E LE+N+V NE + ND K + Q+N VLD +K
# Sbjct: 194 LSE-----KEASINRVKSMALELNEVKNELDAITWKINDLSDKLWKSQNNIRVLDLEK 246
#
#
# >Hs13648017
# Length = 273
#
# Score = 30.8 bits (68), Expect = 1.5
# Identities = 16/49 (32%), Positives = 26/49 (52%)
#
# Query: 2 SSAKPINVYSIPELNQALDEALPSVFARLNYERSYALLDAKLYIGYSIA 50
# ++ K +N YSIPE+N L + +F R +ER + K Y+I+
# Sbjct: 80 ANLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNKFTQKYNIS 128
#
#
# >Hs8923758_3
# Length = 282
#
# Score = 30.8 bits (68), Expect = 1.5
# Identities = 16/49 (32%), Positives = 26/49 (52%)
#
# Query: 2 SSAKPINVYSIPELNQALDEALPSVFARLNYERSYALLDAKLYIGYSIA 50
# ++ K +N YSIPE+N L + +F R +ER + K Y+I+
# Sbjct: 89 ANLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNKFTQKYNIS 137
#
#
# >CE27190
# Length = 410
#
# Score = 29.6 bits (65), Expect = 3.3
# Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
#
# Query: 4 AKPINVYSIPELNQALDEALPSVFARLNYERSYALLDAKLYIGYSIAVV----AGLSFFL 59
# +KP+ V+ + L A+ + +F ER+ LL +L+ Y+ V A +
# Sbjct: 115 SKPLMVFFLTALQYAIFYSFKVIFMISIVERNARLLRLQLFFQYATCVFLLLDAAFALAA 174
#
# Query: 60 DKKFERDQIVTYQK--LLVGAYFVLSLLFWYFSRFIEKGTVYV 100
# D ++++ K LL+ ++SL+F + F+ TV V
# Sbjct: 175 DFGGYNEELIYCNKNPLLIRFVAIISLIFLFVQMFLRIITVQV 217
#
#
# >SPAC23H4.11c
# Length = 188
#
# Score = 28.9 bits (63), Expect = 5.6
# Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
#
# Query: 3 SAKPINVYSIPELNQALDEALPSVFARLNYER 34
# SAKP++ I E+N+ L EA+ S + +LN E+
# Sbjct: 106 SAKPLD---ISEINERLSEAVQSAYTKLNEEK 134
#
#
# >Hs18557493
# Length = 558
#
# Score = 28.9 bits (63), Expect = 5.6
# Identities = 13/40 (32%), Positives = 21/40 (52%)
#
# Query: 54 GLSFFLDKKFERDQIVTYQKLLVGAYFVLSLLFWYFSRFI 93
# G+S + +KF RDQ+ +LL G V+ WY ++
# Sbjct: 486 GISSQISQKFSRDQLPNQPELLPGKLDVVFYHIWYLKIYV 525
#
#
# >7301549
# Length = 357
#
# Score = 28.9 bits (63), Expect = 5.6
# Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
#
# Query: 48 SIAVVAGLSFFLDKKFERDQIVTYQKLLVGAYFVLSLLFWY 88
# SIA GL F+ + + Q+VTY L+VG + +L+++F Y
# Sbjct: 55 SIAYWIGLPFW----WAKSQLVTYFLLIVGNWLLLNVVFHY 91
#
#
# >Hs8922081
# Length = 2969
#
# Score = 28.1 bits (61), Expect = 9.5
# Identities = 10/14 (71%), Positives = 13/14 (92%)
#
# Query: 94 EKGTVYVGKRRGTK 107
# +KGT+Y+GKRRG K
# Sbjct: 1041 KKGTIYIGKRRGRK 1054
#
#
Database: kyvama
Posted date: Nov 8, 2002 2:42 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Lambda K H
0.321 0.138 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,790,070
Number of Sequences: 112920
Number of extensions: 476116
Number of successful extensions: 980
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 973
Number of HSP's gapped (non-prelim): 11
length of query: 178
length of database: 47,500,486
effective HSP length: 102
effective length of query: 76
effective length of database: 35,982,646
effective search space: 2734681096
effective search space used: 2734681096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
S2: 61 (28.1 bits)